mRNA_Ecto-sp13_S_contig14930.3751.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig14930.3751.1 vs. uniprot
Match: D7FWK8_ECTSI (NAD_binding_1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWK8_ECTSI) HSP 1 Score: 352 bits (903), Expect = 1.390e-120 Identity = 176/183 (96.17%), Postives = 178/183 (97.27%), Query Frame = 1
Query: 1 AKVVETGKIAEGQYALTIDAGDIAKEYTVPGQYVQIKVTSSAKPNFFAIASPPDASSGSLEFLIKENDATKALVGVKAGGSVEVSTVMGKGFPITENFTGYKYDFPVQNVVLSASGTGIAPFRAAIESGALELADADDDGLFGRSCKLYWGCHDEESMPWKDRVEAWDKRGVEVVIVLSQPSE 549
AKVVETGKIAEGQYALTIDAGDIAKEYT PGQYVQIKVTSSAKP FFAIASPPDASSGSLEFLIKENDATKALVGVKAGGSVEVSTVMGKGFPI ENFTGYKYDFPVQNVVLSASGTGIAPFRAAIESGALEL DADDDG+FGRSCKLYWGC DEESMPWKDRVEAWDKRGVEVV+VLSQPSE
Sbjct: 78 AKVVETGKIAEGQYALTIDAGDIAKEYTAPGQYVQIKVTSSAKPGFFAIASPPDASSGSLEFLIKENDATKALVGVKAGGSVEVSTVMGKGFPIKENFTGYKYDFPVQNVVLSASGTGIAPFRAAIESGALELPDADDDGVFGRSCKLYWGCRDEESMPWKDRVEAWDKRGVEVVVVLSQPSE 260
BLAST of mRNA_Ecto-sp13_S_contig14930.3751.1 vs. uniprot
Match: A0A6H5JM17_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM17_9PHAE) HSP 1 Score: 300 bits (767), Expect = 2.580e-97 Identity = 150/173 (86.71%), Postives = 157/173 (90.75%), Query Frame = 1
Query: 31 EGQYALTIDAGDIAKEYTVPGQYVQIKVTSSAKPNFFAIASPPDASSGSLEFLIKENDATKALVGVKAGGSVEVSTVMGKGFPITENFTGYKYDFPVQNVVLSASGTGIAPFRAAIESGALELADADDDGLFGRSCKLYWGCHDEESMPWKDRVEAWDKRGVEVVIVLSQPSE 549
EG YALTID GDIAKEYTVPGQYVQIKVTSS KP FFAIASPPDA +ENDAT+ALVGVKAGGSVEVS VMGKGFPITENFTGYKYDFPVQNVVLSASGTGIAPFRAAIESGALEL DADDDG+FGRSCKLYWGC DEES+PWKDRV+AWDK+GVEVVIVLS+PSE
Sbjct: 344 EGHYALTIDVGDIAKEYTVPGQYVQIKVTSSDKPRFFAIASPPDA---------RENDATEALVGVKAGGSVEVSPVMGKGFPITENFTGYKYDFPVQNVVLSASGTGIAPFRAAIESGALELPDADDDGVFGRSCKLYWGCRDEESIPWKDRVKAWDKQGVEVVIVLSEPSE 507
BLAST of mRNA_Ecto-sp13_S_contig14930.3751.1 vs. uniprot
Match: A0A835YXH2_9STRA (NAD_binding_1 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXH2_9STRA) HSP 1 Score: 192 bits (487), Expect = 1.100e-57 Identity = 101/182 (55.49%), Postives = 129/182 (70.88%), Query Frame = 1
Query: 1 AKVVETGKIAEGQYALTIDAGDIAKEYTVPGQYVQIKVTSSAKPNFFAIASPPDASSGSLEFLIKENDATKALVGVKAGGSVEVSTVMGKGFPITENFTGYKYDFPVQNVVLSASGTGIAPFRAAIESGALELADADDDGLFGRSCKLYWGCHDEESMPWKDRVEAWDKRGVEVVIVLSQPS 546
A +V K A+G Y+LT+DAG+I+ Y +PGQYVQIK T K F+AIAS P G EFL+KE D K L +K+G ++++S VMG GFPI E FTGYKYDFPVQNV+L A+GTGIAP RAAIESG LE+ D G FGRSC LY+G H E M ++D++E W+ +G+ VV V+S P+
Sbjct: 70 ASLVSNKKAADGLYSLTVDAGEISTGYKMPGQYVQIK-TGDEKAGFYAIASAPKTD-GMFEFLVKETDTNKWLTQMKSG-TLDMSAVMGNGFPIKEEFTGYKYDFPVQNVILVATGTGIAPIRAAIESGLLEV---DTSGPFGRSCTLYYGAHSPERMAYQDKLEEWESKGMTVVPVMSAPA 245
BLAST of mRNA_Ecto-sp13_S_contig14930.3751.1 vs. uniprot
Match: A0A7R9UH97_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UH97_9STRA) HSP 1 Score: 151 bits (381), Expect = 7.210e-42 Identity = 81/168 (48.21%), Postives = 107/168 (63.69%), Query Frame = 1
Query: 46 LTIDAGDIAKEYTVPGQYVQIKVTSSAKPNFFAIASPPDASSGSLEFLIKENDATKALVGVKAGGSVEVSTVMGKGFPITENFTGY-KYDFPVQNVVLSASGTGIAPFRAAIESGALELADADDDGLFGRSCKLYWGCHDEESMPWKDRVEAWDKRGVEVVIVLSQPS 546
L +D G YT PGQY+Q++ ++ K F+A+AS P + S E L+KE D+ K L+G AG SV+V+ G GF + ENF K+DFPVQNV+L A+GTGIAP +AAIESGAL L D GR+CKLY+G ESMP+ + E W++ GV V+ SQ S
Sbjct: 75 LRVDLGSAKDSYTTPGQYIQMRPSAGEKAGFYALASAPGSGS-EAELLVKEADSNKWLIGANAGTSVQVTAPAGNGFKLAENFDDLVKFDFPVQNVLLFAAGTGIAPIKAAIESGALRLED-------GRTCKLYYGARSMESMPYTEEFEKWEEMGVTVIPCFSQGS 234
BLAST of mRNA_Ecto-sp13_S_contig14930.3751.1 vs. uniprot
Match: A0A448YXU2_9STRA (NAD_binding_1 domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YXU2_9STRA) HSP 1 Score: 149 bits (377), Expect = 2.170e-41 Identity = 80/162 (49.38%), Postives = 106/162 (65.43%), Query Frame = 1
Query: 64 DIAKEYTVPGQYVQIKVTSSAKPNFFAIASPPDASSGSLEFLIKENDATKALVGVKAGGSVEVSTVMGKGFPITENFTGYKYDFPVQNVVLSASGTGIAPFRAAIESGALELADADDDGLFGRSCKLYWGCHDEESMPWKDRVEAWDKRGVEVVIVLSQPSE 549
+ A+E+T+PGQYVQ++ KP F AIASPP+A + EFLIK+ D L A ++E+S V+G GFP+ E F KYDFP QNV+L A+G+GI+P R+AIESG LE A R+ +LY+G E+ + + DR W+K GVEVV VLSQPSE
Sbjct: 74 ETAQEFTIPGQYVQLRPDEETKPIFLAIASPPEAENARFEFLIKKTDDNTWLTEGSAT-NLEISQVLGGGFPVKEEFDSLKYDFPCQNVLLFAAGSGISPIRSAIESGELETTGA-------RTARLYYGARTEDDLCFVDRFPLWEKNGVEVVPVLSQPSE 227
BLAST of mRNA_Ecto-sp13_S_contig14930.3751.1 vs. uniprot
Match: B7G998_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G998_PHATC) HSP 1 Score: 148 bits (373), Expect = 3.530e-41 Identity = 78/185 (42.16%), Postives = 110/185 (59.46%), Query Frame = 1
Query: 4 KVVETGKIAEGQYALTIDAG---DIAKEYTVPGQYVQIKVTSSAKPNFFAIASPPDASSGSLEFLIKENDATKALVGVKAGGSVEVSTVMGKGFPITENFTGYKYDFPVQNVVLSASGTGIAPFRAAIESGALELADADDDGLFGRSCKLYWGCHDEESMPWKDRVEAWDKRGVEVVIVLSQPSE 549
KV K E ++T++ + A EY +PGQYVQ+++ S KP F AIAS PDA + S EFL+K+ + L + G +VEVS V+G G+ I EN KYDFP QN++L A+G+G+AP +AA+ESG L++ R +LY+G E + + D+ W+ G EVV VLSQP E
Sbjct: 13 KVTTNSKACESGNSVTLNVSVQPETASEYKLPGQYVQVRLDDSTKPLFLAIASAPDAENASFEFLVKKTEGNDWLTSIAPGTAVEVSQVLGNGYSIAENIDSLKYDFPTQNILLFAAGSGLAPIKAALESGQLKVGSDSS-----RQARLYYGERTAEDLCYVDKYSEWEAAGFEVVPVLSQPDE 192
BLAST of mRNA_Ecto-sp13_S_contig14930.3751.1 vs. uniprot
Match: A0A1Z5J6M8_FISSO (NAD_binding_1 domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J6M8_FISSO) HSP 1 Score: 148 bits (373), Expect = 1.520e-40 Identity = 73/160 (45.62%), Postives = 105/160 (65.62%), Query Frame = 1
Query: 64 DIAKEYTVPGQYVQIKVTSSAKPNFFAIASPPDASSGSLEFLIKENDATKALVGVKAGGSVEVSTVMGKGFPITENFTGYKYDFPVQNVVLSASGTGIAPFRAAIESGALELADADDDGLFGRSCKLYWGCHDEESMPWKDRVEAWDKRGVEVVIVLSQP 543
+ A EY PGQYVQ+++ + KP F AIASPPDA + EFLIK+ + + + + AG +V++S V+G GFPI EN G+KYDFP QN++L A+G+GIAP +AA ESG L +++A R +LY+G + + + W+K G++VV VLSQP
Sbjct: 96 ETAAEYKNPGQYVQVRLDDATKPLFLAIASPPDAENAVFEFLIKKTEGNEWMTSLSAGAAVQISQVLGNGFPIEENLEGFKYDFPTQNLLLFAAGSGIAPIKAAAESGKLNISEA-------RKARLYYGERTAADLCYVELFSEWEKAGIQVVPVLSQP 248
BLAST of mRNA_Ecto-sp13_S_contig14930.3751.1 vs. uniprot
Match: A0A1E7FVH1_9STRA (Ferredoxin reductase-like protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FVH1_9STRA) HSP 1 Score: 144 bits (363), Expect = 8.330e-40 Identity = 82/184 (44.57%), Postives = 111/184 (60.33%), Query Frame = 1
Query: 4 KVVETGKIAEGQYALTIDAG-DIAKEYTVPGQYVQIKVTSSAKPNFFAIASPPDASSGSLEFLIKENDATKALVGVKAGGSVEVSTVMGKGFPITENFTGY-KYDFPVQNVVLSASGTGIAPFRAAIESGALELADADDDGLFGRSCKLYWGCHDEESMPWKDRVEAWDKRGVEVVIVLSQPSE 549
K ++ A A+T+D + A+EY PGQYVQ+K KP F AIAS PDA + +FLIK+ D L G VEVS V+G GFP+ + KYDFP QN++L A+G+GIAP RAAIESG L+ + + GR+ +LY+G E+ M + D+ W+ G+EVV VLSQPS+
Sbjct: 8 KTNDSANKAATSIAVTVDVSPETAQEYKFPGQYVQVKQNEEGKPLFLAIASAPDAENAKFDFLIKKTDDNAWLT----TGGVEVSQVLGGGFPVKDELDNVVKYDFPCQNILLFAAGSGIAPIRAAIESGELKTSKSG-----GRTARLYYGARTEDDMCFVDKFSEWESMGIEVVPVLSQPSD 182
BLAST of mRNA_Ecto-sp13_S_contig14930.3751.1 vs. uniprot
Match: A0A7S2PRN8_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PRN8_9STRA) HSP 1 Score: 141 bits (355), Expect = 1.820e-38 Identity = 74/171 (43.27%), Postives = 106/171 (61.99%), Query Frame = 1
Query: 43 ALTIDAGDI-AKEYTVPGQYVQIK-VTSSAKPNFFAIASPPDASSGSLEFLIKENDATKALVGVKAGGSVEVSTVMGKGFPITENFTGYKYDFPVQNVVLSASGTGIAPFRAAIESGALELADADDDGLFGRSCKLYWGCHDEESMPWKDRVEAWDKRGVEVVIVLSQPSE 549
++ ++ GD A Y++PGQY Q+K AKP F A+ASPP S EFLIK + + G ++VS ++G+GF + ENF G+K+DFP Q V++ A+G+GIAP RAAIESG L++ GR +LY+GC M + DR + W++ GV+VV VLSQ +E
Sbjct: 30 SVVLNVGDEKAPTYSIPGQYCQVKECIDDAKPAFLAVASPPSEDSNQWEFLIKRTENNGWICDAAVGTKLDVSQILGQGFQMKENFEGFKFDFPTQQVLMFAAGSGIAPIRAAIESGQLKIGK-------GRGARLYYGCRSFNEMAYADRFQQWEQLGVQVVPVLSQEAE 193
BLAST of mRNA_Ecto-sp13_S_contig14930.3751.1 vs. uniprot
Match: A0A6U3NQ63_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3NQ63_9STRA) HSP 1 Score: 140 bits (353), Expect = 2.140e-37 Identity = 78/172 (45.35%), Postives = 104/172 (60.47%), Query Frame = 1
Query: 64 DIAKEYTVPGQYVQIKVTSS--AKPNFFAIASPPDAS--------SGSLEFLIKENDATKALVGVKAGGSVEVSTVMGKGFPITENFTGYKYDFPVQNVVLSASGTGIAPFRAAIESGALELADADDDGLFGRSCKLYWGCHDEESMPWKDRVEAWDKRGVEVVIVLSQPSE 549
D+A EY V GQYVQ++ AKP F AIASPP AS S + EFLIK+ + + + V+VS V+G GFP EN G+KYDFP QNV+ A+G+GIAP RAAIESG + + + G GR+ +LY+G E MP+ D+ W+ G E+V V+S+P E
Sbjct: 96 DVAAEYKVAGQYVQVRPEGDDDAKPIFLAIASPPTASADEAAGPSSTTFEFLIKKTENNDWITNIPPSTCVDVSQVLGNGFPTAENMEGFKYDFPTQNVLFFATGSGIAPIRAAIESGQMGV---NPPGQGGRTARLYYGVSTPEDMPYADKFAQWELAGFEIVPVVSRPEE 264 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14930.3751.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig14930.3751.1 >prot_Ecto-sp13_S_contig14930.3751.1 ID=prot_Ecto-sp13_S_contig14930.3751.1|Name=mRNA_Ecto-sp13_S_contig14930.3751.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=183bp AKVVETGKIAEGQYALTIDAGDIAKEYTVPGQYVQIKVTSSAKPNFFAIAback to top mRNA from alignment at Ecto-sp13_S_contig14930:1237..4254+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig14930.3751.1 ID=mRNA_Ecto-sp13_S_contig14930.3751.1|Name=mRNA_Ecto-sp13_S_contig14930.3751.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3018bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14930:1237..4254+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig14930:1237..4254+ >mRNA_Ecto-sp13_S_contig14930.3751.1 ID=mRNA_Ecto-sp13_S_contig14930.3751.1|Name=mRNA_Ecto-sp13_S_contig14930.3751.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=549bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14930:1237..4254+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |