mRNA_Ecto-sp13_S_contig14916.3741.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig14916.3741.1
Unique NamemRNA_Ecto-sp13_S_contig14916.3741.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig14916.3741.1 vs. uniprot
Match: D8LHQ1_ECTSI (Transketolase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHQ1_ECTSI)

HSP 1 Score: 456 bits (1173), Expect = 3.540e-155
Identity = 227/246 (92.28%), Postives = 229/246 (93.09%), Query Frame = 1
Query:    1 SALSKFGVVYVMTHDSIGLGEDGPTHQPVEVMELLRSTPNMMAFRPADGNEVTGSYICAMEAGSTPSVLALSRQNCPHLTGTSAELVAKGAYTLCEHGPGGAPDVILAATGSEVHICVDVAKALGASGTQARVVSMPCWELFEKQDEAYQLQVFPAGSPVMSVEAGGTQGWERWAHAPFGMARFGASAPYKPLYEKFGYTVENLTKQASAFPKLATKVAEFYKAKGGAQSLVQRVDLNLAAYHNGH 738
            SALSKFGVVYVMTHDSIGLGEDGPTHQPVEVMELLRSTPNMMAFRPADGNEVTGSY+CAMEAGSTPSVLALSRQNC HL GTSAELVAKGAY LCEHGPGGAPDVILAATGSEV ICVDVAKAL ASGTQARVVSMPCWELFE QDEAYQLQVFPAGSPVMSVEAGG QGWERWAHAPFGM RFGASAP+KPLYEKFGYTVENLTKQA       TKVAEFYK KGGAQSLVQRVDLNLA YHNGH
Sbjct:  452 SALSKFGVVYVMTHDSIGLGEDGPTHQPVEVMELLRSTPNMMAFRPADGNEVTGSYMCAMEAGSTPSVLALSRQNCRHLKGTSAELVAKGAYNLCEHGPGGAPDVILAATGSEVQICVDVAKALAASGTQARVVSMPCWELFEHQDEAYQLQVFPAGSPVMSVEAGGIQGWERWAHAPFGMTRFGASAPFKPLYEKFGYTVENLTKQA-------TKVAEFYKVKGGAQSLVQRVDLNLAGYHNGH 690          
BLAST of mRNA_Ecto-sp13_S_contig14916.3741.1 vs. uniprot
Match: A0A6H5L6Q2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6Q2_9PHAE)

HSP 1 Score: 427 bits (1098), Expect = 3.180e-150
Identity = 209/213 (98.12%), Postives = 211/213 (99.06%), Query Frame = 1
Query:    1 SALSKFGVVYVMTHDSIGLGEDGPTHQPVEVMELLRSTPNMMAFRPADGNEVTGSYICAMEAGSTPSVLALSRQNCPHLTGTSAELVAKGAYTLCEHGPGGAPDVILAATGSEVHICVDVAKALGASGTQARVVSMPCWELFEKQDEAYQLQVFPAGSPVMSVEAGGTQGWERWAHAPFGMARFGASAPYKPLYEKFGYTVENLTKQASAFPK 639
            SALSKFGVVYVMTHDSIGLGEDGPTHQPVEVMELLRSTPNMMAFRPADGNEVTGSYICAMEAGSTPSVLALSRQNCPHL GTSAELVAKGAYTLCEHGPGGAPDVILAATGSEVH+CVDVAKALGASGTQARVVSMPCWELFE+QDEAYQLQVFPAGSPVMSVEAGGTQGWERWAHAPFGMARFGASAP KPLYEKFGYTVENLTKQASAFPK
Sbjct:   22 SALSKFGVVYVMTHDSIGLGEDGPTHQPVEVMELLRSTPNMMAFRPADGNEVTGSYICAMEAGSTPSVLALSRQNCPHLMGTSAELVAKGAYTLCEHGPGGAPDVILAATGSEVHMCVDVAKALGASGTQARVVSMPCWELFEQQDEAYQLQVFPAGSPVMSVEAGGTQGWERWAHAPFGMARFGASAPCKPLYEKFGYTVENLTKQASAFPK 234          
BLAST of mRNA_Ecto-sp13_S_contig14916.3741.1 vs. uniprot
Match: A0A835Z7X0_9STRA (Transketolase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7X0_9STRA)

HSP 1 Score: 276 bits (705), Expect = 6.840e-85
Identity = 143/247 (57.89%), Postives = 180/247 (72.87%), Query Frame = 1
Query:    1 SALSKFGVVYVMTHDSIGLGEDGPTHQPVEVMELLRSTPNMMAFRPADGNEVTGSYICAMEAGSTPSVLALSRQNCPHLTGTSAELVAKGAYTLCEHGPGGAPDVILAATGSEVHICVDVAKALGASGTQARVVSMPCWELFEKQDEAYQLQVFPAGSPVMSVEAGGTQGWERWAHAPFGMARFGASAPYKPLYEKFGYTVENLTKQASAFPKLATKVAEFYKAKGGAQSLVQRVDLNLAAYH-NGH 738
            SALS+ GV+Y+MTHDSIGLGEDGPTHQP+E + L R+TPNM  +RPADGNEV+G+Y  AME+ +TPSVLALSRQN P L G+S E V KG Y L E+G G   D+I+A+TGSEV ICVD AK L  +G + R+VSMPC E++++Q EAY+L+ FP G PVMSVEA G +GW ++AHAPFG+ RFG+S     +Y+KFG T +NL  QA        KV  FY  KG A SLV+R  L+   Y+ +GH
Sbjct:  470 SALSRMGVLYIMTHDSIGLGEDGPTHQPIETLALCRATPNMHTWRPADGNEVSGAYYSAMESYNTPSVLALSRQNLPVLEGSSMEKVKKGGYVLKEYGEGDDLDIIIASTGSEVCICVDTAKLLAEAGKKVRIVSMPCLEIYDEQPEAYKLECFPEGVPVMSVEALGIEGWHKYAHAPFGLIRFGSSGKGPDVYKKFGITPDNLKVQAE-------KVIAFYP-KGQAPSLVKRPQLDFVRYNEHGH 708          
BLAST of mRNA_Ecto-sp13_S_contig14916.3741.1 vs. uniprot
Match: A0A1Y1YM51_9FUNG (Transketolase n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1YM51_9FUNG)

HSP 1 Score: 245 bits (625), Expect = 2.230e-73
Identity = 127/225 (56.44%), Postives = 159/225 (70.67%), Query Frame = 1
Query:    1 SALSKFGVVYVMTHDSIGLGEDGPTHQPVEVMELLRSTPNMMAFRPADGNEVTGSYICAMEAGSTPSVLALSRQNCPHLTGTSAELVAKGAYTLCEHGPGGAPDVILAATGSEVHICVDVAKALGASGTQARVVSMPCWELFEKQDEAYQLQVFPAGSPVMSVEAGGTQGWERWAHAPFGMARFGASAPYKPLYEKFGYTVENLTKQASAFPKLATKVAEFYKAK 675
            SALS   V+YVMTHDSIGLGEDGPTHQP+E +  LR+TPN + FRPADGNEV+G+Y+ A++    PSVLALSRQN PHL G+S E   KGAY L +      P+++L ATGSEV ICV+ AK L ASG +AR+VSMP  ELF++Q+ AY+  VFP   PV+SVEA  T GW ++AHA  GM  FGASAP   LYE+FG T       ++A  + + K+ EFYK +
Sbjct:  453 SALSHLRVIYVMTHDSIGLGEDGPTHQPIETLASLRATPNTLVFRPADGNEVSGAYLAAIQNKHRPSVLALSRQNLPHLEGSSIENTLKGAYVLSDVPE---PEIVLVATGSEVSICVEAAKELAASGVKARIVSMPSMELFDQQELAYKESVFPRNVPVLSVEAMTTFGWGKYAHASIGMTTFGASAPAGQLYERFGIT-------SAAIAQKSVKMIEFYKTE 667          
BLAST of mRNA_Ecto-sp13_S_contig14916.3741.1 vs. uniprot
Match: W7TM64_9STRA (Transketolase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TM64_9STRA)

HSP 1 Score: 245 bits (625), Expect = 5.190e-73
Identity = 129/236 (54.66%), Postives = 161/236 (68.22%), Query Frame = 1
Query:    1 SALSKFGVVYVMTHDSIGLGEDGPTHQPVEVMELLRSTPNMMAFRPADGNEVTGSYICAMEAGSTPSVLALSRQNCPHLTGTSAELVAKGAYTLCE----HGPGGAPDVILAATGSEVHICVDVAKALGASGTQARVVSMPCWELFEKQDEAYQLQVFPAGSPVMSVEAGGTQGWERWAHAPFGMARFGASAPYKPLYEKFGYTVENLTKQASAFPKLATKVAEFYKAKGGAQSLV 696
            S LS  GV++VMTHDSIGLGEDGPTHQPVE +E +R+ PN+   RPADGNEV+G+YI A+E   TPSVLALSRQN P+L GTSAE    GAY L E    +G GGAP++IL  +GSEV I V+ AK L A   + RVVS P WELF++Q++ Y+L VFPAG PV+SVEA  T GW +++HA  G+  FGAS PY  +Y K+G T +NL  +A        +V  FY       SL+
Sbjct:  477 SCLSHLGVIFVMTHDSIGLGEDGPTHQPVETLEQIRAMPNLHLLRPADGNEVSGAYISALEHPYTPSVLALSRQNLPNLEGTSAEKTLLGAYVLAEMGGSNGGGGAPELILTGSGSEVAIAVEAAKTL-AETVRVRVVSFPSWELFDQQNKEYRLSVFPAGVPVVSVEASATHGWAKYSHAALGLTWFGASGPYAKVYAKYGLTADNLVSKAR-------EVLAFYAGDRQVPSLI 704          
BLAST of mRNA_Ecto-sp13_S_contig14916.3741.1 vs. uniprot
Match: A0A1Y1ZAC1_9FUNG (Transketolase n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1ZAC1_9FUNG)

HSP 1 Score: 244 bits (622), Expect = 6.260e-73
Identity = 127/225 (56.44%), Postives = 158/225 (70.22%), Query Frame = 1
Query:    1 SALSKFGVVYVMTHDSIGLGEDGPTHQPVEVMELLRSTPNMMAFRPADGNEVTGSYICAMEAGSTPSVLALSRQNCPHLTGTSAELVAKGAYTLCEHGPGGAPDVILAATGSEVHICVDVAKALGASGTQARVVSMPCWELFEKQDEAYQLQVFPAGSPVMSVEAGGTQGWERWAHAPFGMARFGASAPYKPLYEKFGYTVENLTKQASAFPKLATKVAEFYKAK 675
            SALS F VVY+MTHDSIGLGEDGPTHQPVE +  LR+TPN +  RPADGNEV+G+Y+ A +  + PSVLAL+RQN PHL G+S E   KGAY L    P  +PD+IL ATGSEV ICV+  K L   G  A VVSMP  ELFE+QD AY+  VFP G PV+S EA  T GW+++AHA  G+  FGASAPY+ LY+KFG T +++ ++         +V E+YK +
Sbjct:  454 SALSHFRVVYIMTHDSIGLGEDGPTHQPVETLAHLRATPNTLVLRPADGNEVSGAYLAAFQNTTRPSVLALTRQNLPHLEGSSIENTLKGAYAL---KPIESPDLILVATGSEVSICVEATKELAEKGIHASVVSMPSMELFEEQDLAYKKSVFPDGVPVISAEAMTTFGWQKYAHASIGLKTFGASAPYEQLYKKFGLTSKDIAEKG-------VQVTEYYKTQ 668          
BLAST of mRNA_Ecto-sp13_S_contig14916.3741.1 vs. uniprot
Match: A0A1Y1YM21_9FUNG (Transketolase n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1YM21_9FUNG)

HSP 1 Score: 243 bits (621), Expect = 8.770e-73
Identity = 125/225 (55.56%), Postives = 155/225 (68.89%), Query Frame = 1
Query:    1 SALSKFGVVYVMTHDSIGLGEDGPTHQPVEVMELLRSTPNMMAFRPADGNEVTGSYICAMEAGSTPSVLALSRQNCPHLTGTSAELVAKGAYTLCEHGPGGAPDVILAATGSEVHICVDVAKALGASGTQARVVSMPCWELFEKQDEAYQLQVFPAGSPVMSVEAGGTQGWERWAHAPFGMARFGASAPYKPLYEKFGYTVENLTKQASAFPKLATKVAEFYKAK 675
            SALS   V+Y+MTHDSIGLGEDGPTHQP+E +  LR+TPN + FRPADGNEV+G+Y+ A +  + PSV+AL+RQN PHL G+S E V KG Y L        P +IL ATGSEV I VD AK L   G   RVVSMP  ELFE+Q+++Y+  VFP G PV+SVEA  T GW R+AHA  GM  FG+SAPY+ LYE+FG+T  N+ ++A        K   +YK K
Sbjct:  454 SALSHLRVIYIMTHDSIGLGEDGPTHQPIETLATLRATPNTLVFRPADGNEVSGAYLSAFQNKTRPSVIALTRQNLPHLEGSSIENVLKGGYVLQGSDK---PQIILVATGSEVSIIVDAAKELEKKGVSTRVVSMPSMELFEEQEQSYKESVFPEGIPVLSVEAMSTFGWSRYAHASVGMKGFGSSAPYEQLYERFGFTAANVAEKAQ-------KTLTYYKNK 668          
BLAST of mRNA_Ecto-sp13_S_contig14916.3741.1 vs. uniprot
Match: A0A8H7BED6_9FUNG (Transketolase n=1 Tax=Apophysomyces ossiformis TaxID=679940 RepID=A0A8H7BED6_9FUNG)

HSP 1 Score: 243 bits (620), Expect = 1.230e-72
Identity = 122/208 (58.65%), Postives = 150/208 (72.12%), Query Frame = 1
Query:    1 SALSKFGVVYVMTHDSIGLGEDGPTHQPVEVMELLRSTPNMMAFRPADGNEVTGSYICAMEAGSTPSVLALSRQNCPHLTGTSAELVAKGAYTLCEHGPGGAPDVILAATGSEVHICVDVAKALGASGTQARVVSMPCWELFEKQDEAYQLQVFPAGSPVMSVEAGGTQGWERWAHAPFGMARFGASAPYKPLYEKFGYTVENLTKQA 624
            SALS   V+YVMTHDSIGLGEDGPTHQP+E + L R+TPNM+ FRPADGNEV+G+Y+ A+E  + PSV+ALSRQN PHL G+S E+V +GAY L +      PDV+L ATGSEV + V+ AK L   G   RVVSMPC EL+++Q   Y+  VFPAG PV+S+EA G  GWER++HA  GM  FGASAP K LY  F  T E   ++A
Sbjct:  454 SALSHVRVLYVMTHDSIGLGEDGPTHQPIETLTLTRATPNMLTFRPADGNEVSGTYLAALENKTRPSVIALSRQNLPHLEGSSVEIVRRGAYVLSDVAN---PDVVLLATGSEVSLAVESAKILNEQGVATRVVSMPCSELYDEQPAEYKRSVFPAGVPVVSIEALGVWGWERYSHAQVGMRSFGASAPIKDLYNHFNITAEATVEKA 658          
BLAST of mRNA_Ecto-sp13_S_contig14916.3741.1 vs. uniprot
Match: A0A162PM64_PHYB8 (Transketolase n=1 Tax=Phycomyces blakesleeanus (strain ATCC 8743b / DSM 1359 / FGSC 10004 / NBRC 33097 / NRRL 1555) TaxID=763407 RepID=A0A162PM64_PHYB8)

HSP 1 Score: 243 bits (619), Expect = 1.720e-72
Identity = 129/226 (57.08%), Postives = 156/226 (69.03%), Query Frame = 1
Query:    1 SALSKFGVVYVMTHDSIGLGEDGPTHQPVEVMELLRSTPNMMAFRPADGNEVTGSYICAMEAGSTPSVLALSRQNCPHLTGTSAELVAKGAYTLCEHGPGGAPDVILAATGSEVHICVDVAKALGASGTQARVVSMPCWELFEKQDEAYQLQVFPAGSPVMSVEAGGTQGWERWAHAPFGMARFGASAPYKPLYEKFGYTVENLTKQASAFPKLATKVAEFYKAKG 678
            SALS   V+YVMTHDSIGLGEDGPTHQP+E + L R+TPNM+ FRPADGNEV+G+Y+ A+E    PSV+ALSRQN P+L G+S E+V KGAY L   GP  A  +   ATGSEV I V+ AKAL   G  ARV+SMPC ELF+ Q E Y+  VF  G PV+S+EA GT GWER++H   GM  FGASAP K LY+KFG T E+   +A        KV  +Y+  G
Sbjct:  454 SALSHHRVIYVMTHDSIGLGEDGPTHQPIETLALTRATPNMLTFRPADGNEVSGTYLAAIENQHRPSVIALSRQNLPNLVGSSVEIVRKGAYVLS--GPKDAK-IAFVATGSEVEIAVNAAKALAQEGVAARVISMPCSELFDDQSEEYKKSVFAPGIPVISIEALGTFGWERYSHTSIGMKTFGASAPIKDLYKKFGITPEDAVAKAH-------KVIAYYEKVG 669          
BLAST of mRNA_Ecto-sp13_S_contig14916.3741.1 vs. uniprot
Match: A0A0L0HLC9_SPIPD (Transketolase n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0HLC9_SPIPD)

HSP 1 Score: 241 bits (614), Expect = 8.990e-72
Identity = 127/235 (54.04%), Postives = 159/235 (67.66%), Query Frame = 1
Query:    1 SALSKFGVVYVMTHDSIGLGEDGPTHQPVEVMELLRSTPNMMAFRPADGNEVTGSYICAMEAGSTPSVLALSRQNCPHLTGTSAELVAKGAYTLCEHGPGGAPDVILAATGSEVHICVDVAKALGASGTQARVVSMPCWELFEKQDEAYQLQVFPAGSPVMSVEAGGTQGWERWAHAPFGMARFGASAPYKPLYEKFGYTVENLTKQASAFPKLATKVAEFYKAKGGAQSLVQRV 705
            SALSK  V+Y+MTHDSIGLGEDGPTHQP+E +  +R+ PN++ FRPADGNEV+GSY+ ++EA   PSVL L+RQN P L G+S E V KGAY L E  P   P VIL ATGSEV + VD A  L +    ARVVSMPCWELFE+Q   YQ  VF  G PV+S+EA  T GW++WAH   G+  FGAS PYK LY+KFG   + +  +A        K+  FYK +   ++ +QR+
Sbjct:  453 SALSKHHVLYIMTHDSIGLGEDGPTHQPIETLACMRAMPNILNFRPADGNEVSGSYLVSLEAHDRPSVLILTRQNLPQLAGSSIEAVRKGAYVL-EDAPN--PSVILVATGSEVSLAVDTAAQLASENIAARVVSMPCWELFEEQSVEYQQSVFLDGVPVVSIEAMSTFGWQKWAHLTCGIDTFGASGPYKDLYKKFGLVPDVIAAKAK-------KLIAFYKDRK-PENKIQRI 676          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14916.3741.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LHQ1_ECTSI3.540e-15592.28Transketolase n=1 Tax=Ectocarpus siliculosus TaxID... [more]
A0A6H5L6Q2_9PHAE3.180e-15098.12Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z7X0_9STRA6.840e-8557.89Transketolase n=1 Tax=Tribonema minus TaxID=303371... [more]
A0A1Y1YM51_9FUNG2.230e-7356.44Transketolase n=1 Tax=Basidiobolus meristosporus C... [more]
W7TM64_9STRA5.190e-7354.66Transketolase n=2 Tax=Monodopsidaceae TaxID=425072... [more]
A0A1Y1ZAC1_9FUNG6.260e-7356.44Transketolase n=1 Tax=Basidiobolus meristosporus C... [more]
A0A1Y1YM21_9FUNG8.770e-7355.56Transketolase n=1 Tax=Basidiobolus meristosporus C... [more]
A0A8H7BED6_9FUNG1.230e-7258.65Transketolase n=1 Tax=Apophysomyces ossiformis Tax... [more]
A0A162PM64_PHYB81.720e-7257.08Transketolase n=1 Tax=Phycomyces blakesleeanus (st... [more]
A0A0L0HLC9_SPIPD8.990e-7254.04Transketolase n=2 Tax=Spizellomyces TaxID=4815 Rep... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14916contigEcto-sp13_S_contig14916:1344..3921 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score455.3
Seed ortholog evalue1.8e-125
Seed eggNOG ortholog2880.D8LHQ1
Model size741
Hectar predicted targeting categoryother localisation
Exons5
EggNOG free text desc.transketolase activity
EggNOG OGsCOG0021@1,KOG0523@2759
Cds size741
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462795.8704443-CDS-Ecto-sp13_S_contig14916:1343..14421681462795.8704443-CDS-Ecto-sp13_S_contig14916:1343..1442Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14916 1344..1442 -
1681462795.8835957-CDS-Ecto-sp13_S_contig14916:2098..22831681462795.8835957-CDS-Ecto-sp13_S_contig14916:2098..2283Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14916 2099..2283 -
1681462795.8940935-CDS-Ecto-sp13_S_contig14916:2645..27711681462795.8940935-CDS-Ecto-sp13_S_contig14916:2645..2771Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14916 2646..2771 -
1681462795.9043274-CDS-Ecto-sp13_S_contig14916:3314..34921681462795.9043274-CDS-Ecto-sp13_S_contig14916:3314..3492Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14916 3315..3492 -
1681462795.9135349-CDS-Ecto-sp13_S_contig14916:3768..39211681462795.9135349-CDS-Ecto-sp13_S_contig14916:3768..3921Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14916 3769..3921 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14916.3741.1prot_Ecto-sp13_S_contig14916.3741.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig14916 1344..3921 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig14916.3741.1

>prot_Ecto-sp13_S_contig14916.3741.1 ID=prot_Ecto-sp13_S_contig14916.3741.1|Name=mRNA_Ecto-sp13_S_contig14916.3741.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=247bp
SALSKFGVVYVMTHDSIGLGEDGPTHQPVEVMELLRSTPNMMAFRPADGN
EVTGSYICAMEAGSTPSVLALSRQNCPHLTGTSAELVAKGAYTLCEHGPG
GAPDVILAATGSEVHICVDVAKALGASGTQARVVSMPCWELFEKQDEAYQ
LQVFPAGSPVMSVEAGGTQGWERWAHAPFGMARFGASAPYKPLYEKFGYT
VENLTKQASAFPKLATKVAEFYKAKGGAQSLVQRVDLNLAAYHNGH*
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mRNA from alignment at Ecto-sp13_S_contig14916:1344..3921-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig14916.3741.1 ID=mRNA_Ecto-sp13_S_contig14916.3741.1|Name=mRNA_Ecto-sp13_S_contig14916.3741.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2578bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14916:1344..3921- (Ectocarpus species13 EcNAP12_S_4_19m)
AGCGCTCTGTCCAAGTTTGGTGTGGTGTACGTGATGACTCACGACTCCAT CGGTCTCGGCGAGGATGGGCCTACCCACCAGCCCGTGGAAGTCATGGAGC TCCTTCGGTCCACCCCTAACATGATGGCGTTCCGCCCGGCCGACGGGAAC GAGGTATGTATGTTCTTACATGAAGGTTCTTTTATTATTTCTTGTGCCCG AGGGGAACGAGATACGTTCTGATGTTCTTGTGTCCGCCGGGAACGAGGTA GTTCTTGGGTACGTAGGTTACATTCTTCCGAAAATTGTCAGTTTTTCGCT TGCATTTCATGTCCATGTATGTCACGACTGTTGTCAAGCATTTTTTCCGC TAACGTTATGCCGAATGACTTCACAAACTTTTTTTCTTGTGACTGTTTCT CTCGTCTTTTTGCTTTCTCTCCTTATCAGGTAACAGGGTCGTACATCTGC GCGATGGAGGCGGGCTCCACCCCTTCTGTCCTGGCGCTCTCGAGGCAGAA CTGCCCACACCTAACGGGGACCTCTGCCGAGCTCGTGGCCAAGGGGGCCT ACACTCTGTGCGAGCACGGACCCGGCGGTGCCCCCGACGTCATCCTCGCC GCCACCGGTTAGTCGTCATGCCGCACCCCACCCTTTCTAGCATTTTCTCT CAAACGCGCGGCGCTTGCTGCATTCACAGGCCAAAACCTGGAACTATGAG TTTTGCTTACGTTGCAGGAGTTTTTGTTTGTGTGTGTTCATCACGTTCCC TCTGTTCGGGCGTTGGTTCGCGGTTTGTGCCGCCTTCTTGTAGCGCGACA CGACCGGGTATGTGAGTATCTTTCTTCCCCTTTTTTGTTGCTCATCGCCT TTTCTGTTGTTGGTCTTTCTTTCGTTGTTCGTCTGAAGTTTGTTAGAAGT TTGTTGTATGGTTGATTTCGTGGGAAAACAACTCGTGTTCTCGTGGGGTG TGGCGTTCTCCCAGTTTTCTACCAACGTCACGATTCGTCGCACAACTTTC ATACGCGAGACCTTTATTACTACTGTGGCGGGCTGGGATTACAAACGAAA AGCGCGATCACTCTTTCGTGCGATTTTTGTTCGACTGTTTTGCGCCCGAT TTAATTTCAATCTTATTTTGCCGTCAACTTTTTTTTAATCATTTTTTTAG GTTCGGAGGTGCACATCTGCGTGGACGTCGCCAAGGCTCTCGGAGCCAGC GGCACCCAAGCCCGCGTGGTGTCCATGCCGTGCTGGGAGCTCTTCGAGAA GCAGGACGAGGCCTACCAACTCCAAGGTACGGGGACACTGCTACTATCGA TCTATAAGTACCTGCTGTTGTTTGCGTTGTCTTCGGCGGCGTTTCCTCGC GGTGCTTTCATCCACGCGCCTCCTCATCGGCCTGCACAGGTTTGAAGGCG GCGCACGTGTCTGAAATGGTACAATACTTCGCAAACGGCTGTCGCTTTGA TGCAGCACACAGAATAAAATATCAAACAAAATAATGTGGAGCCCGCAGCC CGCCCCAATCCCGGACCTAATGTGGAGCACGCACACCCCAATCCCGGACG TCATGCGAGTAAGCTTATTTCCTTGCCACGTCCCTTATCTGCTGTTGCTG CTCGCGGACACGCCTGCGCTGCCACTCCCTTGTCGCAGTCTTCCCTGCCG GAAGCCCGGTCATGTCGGTCGAGGCCGGCGGCACCCAGGGCTGGGAGCGG TGGGCGCACGCCCCCTTTGGGATGGCTCGCTTCGGCGCCTCTGCCCCGTA CAAGCCTCTCTACGAGAAGTTCGGCTACACCGTAGAAAACCTCACCAAGC AGGCGAGTGCCTTTCCAAAGTTGGTGGCGCCGCCCCTTAAAACGTACTCT GCTTTTAGTGGTGTGGGCTTGAAAGGTCGACCTCACCGAAACTTGGCGGC TTTCAGTTCGTTGTCCACTGCTTACGATGCTGAGACTGCTGGTGTTTTTT GTTTGAAATTTTTATCATTTTCTGTGTGTGTGGAACTAGCTCTCACCCAC AATCGGACGCGTTCACAACGGGTTGCTGAACGAAATATTTTGGCGTTGCC TGCTGCTGTTTCGCGGCGCTTCCCTCTACAAAGTTTGTTTTCGCGTGTAC CGCACTAAGAGATTTGCTGGGTGACTTGTTTGGGTCTCTCGTAGAGGACA ACAAGGTTCTGGACAGACAGCCGCATCTCTCGCTTGCTACCAAAGACTGC TGCACGGCCGTGGTAACACAACTGTATCTCCACCGTTGTGGCTTGCGTTT CGCGTGTATCCCCCCTGCCCCCCGGAACGCAAGCACTATCTAGTTTAAAC CCTCGAAGCCCGTCCTGTTCTCATAAGAAGTGCATGGGAAGGGTAAGGCG GCACACCACCATCCGTATCATCCACACCGTGTAATAATAGCTTCAACCAC GGGCCTGTCGTTCCCGCCACGTAACGTTTTCCGTCTCTTTCTCACCTCCT TTTGTTCTGTGCACCCCTGCTTTCTCTAGGCTACCAAGGTGGCGGAGTTC TACAAGGCCAAGGGCGGCGCGCAGTCTCTGGTCCAGCGGGTCGATCTGAA CCTCGCCGCATACCACAACGGACACTGA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig14916:1344..3921-

>mRNA_Ecto-sp13_S_contig14916.3741.1 ID=mRNA_Ecto-sp13_S_contig14916.3741.1|Name=mRNA_Ecto-sp13_S_contig14916.3741.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=741bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14916:1344..3921- (Ectocarpus species13 EcNAP12_S_4_19m)
AGCGCTCTGTCCAAGTTTGGTGTGGTGTACGTGATGACTCACGACTCCAT
CGGTCTCGGCGAGGATGGGCCTACCCACCAGCCCGTGGAAGTCATGGAGC
TCCTTCGGTCCACCCCTAACATGATGGCGTTCCGCCCGGCCGACGGGAAC
GAGGTAACAGGGTCGTACATCTGCGCGATGGAGGCGGGCTCCACCCCTTC
TGTCCTGGCGCTCTCGAGGCAGAACTGCCCACACCTAACGGGGACCTCTG
CCGAGCTCGTGGCCAAGGGGGCCTACACTCTGTGCGAGCACGGACCCGGC
GGTGCCCCCGACGTCATCCTCGCCGCCACCGGTTCGGAGGTGCACATCTG
CGTGGACGTCGCCAAGGCTCTCGGAGCCAGCGGCACCCAAGCCCGCGTGG
TGTCCATGCCGTGCTGGGAGCTCTTCGAGAAGCAGGACGAGGCCTACCAA
CTCCAAGTCTTCCCTGCCGGAAGCCCGGTCATGTCGGTCGAGGCCGGCGG
CACCCAGGGCTGGGAGCGGTGGGCGCACGCCCCCTTTGGGATGGCTCGCT
TCGGCGCCTCTGCCCCGTACAAGCCTCTCTACGAGAAGTTCGGCTACACC
GTAGAAAACCTCACCAAGCAGGCGAGTGCCTTTCCAAAGTTGGCTACCAA
GGTGGCGGAGTTCTACAAGGCCAAGGGCGGCGCGCAGTCTCTGGTCCAGC
GGGTCGATCTGAACCTCGCCGCATACCACAACGGACACTGA
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