mRNA_Ecto-sp13_S_contig14916.3741.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig14916.3741.1 vs. uniprot
Match: D8LHQ1_ECTSI (Transketolase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHQ1_ECTSI) HSP 1 Score: 456 bits (1173), Expect = 3.540e-155 Identity = 227/246 (92.28%), Postives = 229/246 (93.09%), Query Frame = 1
Query: 1 SALSKFGVVYVMTHDSIGLGEDGPTHQPVEVMELLRSTPNMMAFRPADGNEVTGSYICAMEAGSTPSVLALSRQNCPHLTGTSAELVAKGAYTLCEHGPGGAPDVILAATGSEVHICVDVAKALGASGTQARVVSMPCWELFEKQDEAYQLQVFPAGSPVMSVEAGGTQGWERWAHAPFGMARFGASAPYKPLYEKFGYTVENLTKQASAFPKLATKVAEFYKAKGGAQSLVQRVDLNLAAYHNGH 738
SALSKFGVVYVMTHDSIGLGEDGPTHQPVEVMELLRSTPNMMAFRPADGNEVTGSY+CAMEAGSTPSVLALSRQNC HL GTSAELVAKGAY LCEHGPGGAPDVILAATGSEV ICVDVAKAL ASGTQARVVSMPCWELFE QDEAYQLQVFPAGSPVMSVEAGG QGWERWAHAPFGM RFGASAP+KPLYEKFGYTVENLTKQA TKVAEFYK KGGAQSLVQRVDLNLA YHNGH
Sbjct: 452 SALSKFGVVYVMTHDSIGLGEDGPTHQPVEVMELLRSTPNMMAFRPADGNEVTGSYMCAMEAGSTPSVLALSRQNCRHLKGTSAELVAKGAYNLCEHGPGGAPDVILAATGSEVQICVDVAKALAASGTQARVVSMPCWELFEHQDEAYQLQVFPAGSPVMSVEAGGIQGWERWAHAPFGMTRFGASAPFKPLYEKFGYTVENLTKQA-------TKVAEFYKVKGGAQSLVQRVDLNLAGYHNGH 690
BLAST of mRNA_Ecto-sp13_S_contig14916.3741.1 vs. uniprot
Match: A0A6H5L6Q2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6Q2_9PHAE) HSP 1 Score: 427 bits (1098), Expect = 3.180e-150 Identity = 209/213 (98.12%), Postives = 211/213 (99.06%), Query Frame = 1
Query: 1 SALSKFGVVYVMTHDSIGLGEDGPTHQPVEVMELLRSTPNMMAFRPADGNEVTGSYICAMEAGSTPSVLALSRQNCPHLTGTSAELVAKGAYTLCEHGPGGAPDVILAATGSEVHICVDVAKALGASGTQARVVSMPCWELFEKQDEAYQLQVFPAGSPVMSVEAGGTQGWERWAHAPFGMARFGASAPYKPLYEKFGYTVENLTKQASAFPK 639
SALSKFGVVYVMTHDSIGLGEDGPTHQPVEVMELLRSTPNMMAFRPADGNEVTGSYICAMEAGSTPSVLALSRQNCPHL GTSAELVAKGAYTLCEHGPGGAPDVILAATGSEVH+CVDVAKALGASGTQARVVSMPCWELFE+QDEAYQLQVFPAGSPVMSVEAGGTQGWERWAHAPFGMARFGASAP KPLYEKFGYTVENLTKQASAFPK
Sbjct: 22 SALSKFGVVYVMTHDSIGLGEDGPTHQPVEVMELLRSTPNMMAFRPADGNEVTGSYICAMEAGSTPSVLALSRQNCPHLMGTSAELVAKGAYTLCEHGPGGAPDVILAATGSEVHMCVDVAKALGASGTQARVVSMPCWELFEQQDEAYQLQVFPAGSPVMSVEAGGTQGWERWAHAPFGMARFGASAPCKPLYEKFGYTVENLTKQASAFPK 234
BLAST of mRNA_Ecto-sp13_S_contig14916.3741.1 vs. uniprot
Match: A0A835Z7X0_9STRA (Transketolase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7X0_9STRA) HSP 1 Score: 276 bits (705), Expect = 6.840e-85 Identity = 143/247 (57.89%), Postives = 180/247 (72.87%), Query Frame = 1
Query: 1 SALSKFGVVYVMTHDSIGLGEDGPTHQPVEVMELLRSTPNMMAFRPADGNEVTGSYICAMEAGSTPSVLALSRQNCPHLTGTSAELVAKGAYTLCEHGPGGAPDVILAATGSEVHICVDVAKALGASGTQARVVSMPCWELFEKQDEAYQLQVFPAGSPVMSVEAGGTQGWERWAHAPFGMARFGASAPYKPLYEKFGYTVENLTKQASAFPKLATKVAEFYKAKGGAQSLVQRVDLNLAAYH-NGH 738
SALS+ GV+Y+MTHDSIGLGEDGPTHQP+E + L R+TPNM +RPADGNEV+G+Y AME+ +TPSVLALSRQN P L G+S E V KG Y L E+G G D+I+A+TGSEV ICVD AK L +G + R+VSMPC E++++Q EAY+L+ FP G PVMSVEA G +GW ++AHAPFG+ RFG+S +Y+KFG T +NL QA KV FY KG A SLV+R L+ Y+ +GH
Sbjct: 470 SALSRMGVLYIMTHDSIGLGEDGPTHQPIETLALCRATPNMHTWRPADGNEVSGAYYSAMESYNTPSVLALSRQNLPVLEGSSMEKVKKGGYVLKEYGEGDDLDIIIASTGSEVCICVDTAKLLAEAGKKVRIVSMPCLEIYDEQPEAYKLECFPEGVPVMSVEALGIEGWHKYAHAPFGLIRFGSSGKGPDVYKKFGITPDNLKVQAE-------KVIAFYP-KGQAPSLVKRPQLDFVRYNEHGH 708
BLAST of mRNA_Ecto-sp13_S_contig14916.3741.1 vs. uniprot
Match: A0A1Y1YM51_9FUNG (Transketolase n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1YM51_9FUNG) HSP 1 Score: 245 bits (625), Expect = 2.230e-73 Identity = 127/225 (56.44%), Postives = 159/225 (70.67%), Query Frame = 1
Query: 1 SALSKFGVVYVMTHDSIGLGEDGPTHQPVEVMELLRSTPNMMAFRPADGNEVTGSYICAMEAGSTPSVLALSRQNCPHLTGTSAELVAKGAYTLCEHGPGGAPDVILAATGSEVHICVDVAKALGASGTQARVVSMPCWELFEKQDEAYQLQVFPAGSPVMSVEAGGTQGWERWAHAPFGMARFGASAPYKPLYEKFGYTVENLTKQASAFPKLATKVAEFYKAK 675
SALS V+YVMTHDSIGLGEDGPTHQP+E + LR+TPN + FRPADGNEV+G+Y+ A++ PSVLALSRQN PHL G+S E KGAY L + P+++L ATGSEV ICV+ AK L ASG +AR+VSMP ELF++Q+ AY+ VFP PV+SVEA T GW ++AHA GM FGASAP LYE+FG T ++A + + K+ EFYK +
Sbjct: 453 SALSHLRVIYVMTHDSIGLGEDGPTHQPIETLASLRATPNTLVFRPADGNEVSGAYLAAIQNKHRPSVLALSRQNLPHLEGSSIENTLKGAYVLSDVPE---PEIVLVATGSEVSICVEAAKELAASGVKARIVSMPSMELFDQQELAYKESVFPRNVPVLSVEAMTTFGWGKYAHASIGMTTFGASAPAGQLYERFGIT-------SAAIAQKSVKMIEFYKTE 667
BLAST of mRNA_Ecto-sp13_S_contig14916.3741.1 vs. uniprot
Match: W7TM64_9STRA (Transketolase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TM64_9STRA) HSP 1 Score: 245 bits (625), Expect = 5.190e-73 Identity = 129/236 (54.66%), Postives = 161/236 (68.22%), Query Frame = 1
Query: 1 SALSKFGVVYVMTHDSIGLGEDGPTHQPVEVMELLRSTPNMMAFRPADGNEVTGSYICAMEAGSTPSVLALSRQNCPHLTGTSAELVAKGAYTLCE----HGPGGAPDVILAATGSEVHICVDVAKALGASGTQARVVSMPCWELFEKQDEAYQLQVFPAGSPVMSVEAGGTQGWERWAHAPFGMARFGASAPYKPLYEKFGYTVENLTKQASAFPKLATKVAEFYKAKGGAQSLV 696
S LS GV++VMTHDSIGLGEDGPTHQPVE +E +R+ PN+ RPADGNEV+G+YI A+E TPSVLALSRQN P+L GTSAE GAY L E +G GGAP++IL +GSEV I V+ AK L A + RVVS P WELF++Q++ Y+L VFPAG PV+SVEA T GW +++HA G+ FGAS PY +Y K+G T +NL +A +V FY SL+
Sbjct: 477 SCLSHLGVIFVMTHDSIGLGEDGPTHQPVETLEQIRAMPNLHLLRPADGNEVSGAYISALEHPYTPSVLALSRQNLPNLEGTSAEKTLLGAYVLAEMGGSNGGGGAPELILTGSGSEVAIAVEAAKTL-AETVRVRVVSFPSWELFDQQNKEYRLSVFPAGVPVVSVEASATHGWAKYSHAALGLTWFGASGPYAKVYAKYGLTADNLVSKAR-------EVLAFYAGDRQVPSLI 704
BLAST of mRNA_Ecto-sp13_S_contig14916.3741.1 vs. uniprot
Match: A0A1Y1ZAC1_9FUNG (Transketolase n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1ZAC1_9FUNG) HSP 1 Score: 244 bits (622), Expect = 6.260e-73 Identity = 127/225 (56.44%), Postives = 158/225 (70.22%), Query Frame = 1
Query: 1 SALSKFGVVYVMTHDSIGLGEDGPTHQPVEVMELLRSTPNMMAFRPADGNEVTGSYICAMEAGSTPSVLALSRQNCPHLTGTSAELVAKGAYTLCEHGPGGAPDVILAATGSEVHICVDVAKALGASGTQARVVSMPCWELFEKQDEAYQLQVFPAGSPVMSVEAGGTQGWERWAHAPFGMARFGASAPYKPLYEKFGYTVENLTKQASAFPKLATKVAEFYKAK 675
SALS F VVY+MTHDSIGLGEDGPTHQPVE + LR+TPN + RPADGNEV+G+Y+ A + + PSVLAL+RQN PHL G+S E KGAY L P +PD+IL ATGSEV ICV+ K L G A VVSMP ELFE+QD AY+ VFP G PV+S EA T GW+++AHA G+ FGASAPY+ LY+KFG T +++ ++ +V E+YK +
Sbjct: 454 SALSHFRVVYIMTHDSIGLGEDGPTHQPVETLAHLRATPNTLVLRPADGNEVSGAYLAAFQNTTRPSVLALTRQNLPHLEGSSIENTLKGAYAL---KPIESPDLILVATGSEVSICVEATKELAEKGIHASVVSMPSMELFEEQDLAYKKSVFPDGVPVISAEAMTTFGWQKYAHASIGLKTFGASAPYEQLYKKFGLTSKDIAEKG-------VQVTEYYKTQ 668
BLAST of mRNA_Ecto-sp13_S_contig14916.3741.1 vs. uniprot
Match: A0A1Y1YM21_9FUNG (Transketolase n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1YM21_9FUNG) HSP 1 Score: 243 bits (621), Expect = 8.770e-73 Identity = 125/225 (55.56%), Postives = 155/225 (68.89%), Query Frame = 1
Query: 1 SALSKFGVVYVMTHDSIGLGEDGPTHQPVEVMELLRSTPNMMAFRPADGNEVTGSYICAMEAGSTPSVLALSRQNCPHLTGTSAELVAKGAYTLCEHGPGGAPDVILAATGSEVHICVDVAKALGASGTQARVVSMPCWELFEKQDEAYQLQVFPAGSPVMSVEAGGTQGWERWAHAPFGMARFGASAPYKPLYEKFGYTVENLTKQASAFPKLATKVAEFYKAK 675
SALS V+Y+MTHDSIGLGEDGPTHQP+E + LR+TPN + FRPADGNEV+G+Y+ A + + PSV+AL+RQN PHL G+S E V KG Y L P +IL ATGSEV I VD AK L G RVVSMP ELFE+Q+++Y+ VFP G PV+SVEA T GW R+AHA GM FG+SAPY+ LYE+FG+T N+ ++A K +YK K
Sbjct: 454 SALSHLRVIYIMTHDSIGLGEDGPTHQPIETLATLRATPNTLVFRPADGNEVSGAYLSAFQNKTRPSVIALTRQNLPHLEGSSIENVLKGGYVLQGSDK---PQIILVATGSEVSIIVDAAKELEKKGVSTRVVSMPSMELFEEQEQSYKESVFPEGIPVLSVEAMSTFGWSRYAHASVGMKGFGSSAPYEQLYERFGFTAANVAEKAQ-------KTLTYYKNK 668
BLAST of mRNA_Ecto-sp13_S_contig14916.3741.1 vs. uniprot
Match: A0A8H7BED6_9FUNG (Transketolase n=1 Tax=Apophysomyces ossiformis TaxID=679940 RepID=A0A8H7BED6_9FUNG) HSP 1 Score: 243 bits (620), Expect = 1.230e-72 Identity = 122/208 (58.65%), Postives = 150/208 (72.12%), Query Frame = 1
Query: 1 SALSKFGVVYVMTHDSIGLGEDGPTHQPVEVMELLRSTPNMMAFRPADGNEVTGSYICAMEAGSTPSVLALSRQNCPHLTGTSAELVAKGAYTLCEHGPGGAPDVILAATGSEVHICVDVAKALGASGTQARVVSMPCWELFEKQDEAYQLQVFPAGSPVMSVEAGGTQGWERWAHAPFGMARFGASAPYKPLYEKFGYTVENLTKQA 624
SALS V+YVMTHDSIGLGEDGPTHQP+E + L R+TPNM+ FRPADGNEV+G+Y+ A+E + PSV+ALSRQN PHL G+S E+V +GAY L + PDV+L ATGSEV + V+ AK L G RVVSMPC EL+++Q Y+ VFPAG PV+S+EA G GWER++HA GM FGASAP K LY F T E ++A
Sbjct: 454 SALSHVRVLYVMTHDSIGLGEDGPTHQPIETLTLTRATPNMLTFRPADGNEVSGTYLAALENKTRPSVIALSRQNLPHLEGSSVEIVRRGAYVLSDVAN---PDVVLLATGSEVSLAVESAKILNEQGVATRVVSMPCSELYDEQPAEYKRSVFPAGVPVVSIEALGVWGWERYSHAQVGMRSFGASAPIKDLYNHFNITAEATVEKA 658
BLAST of mRNA_Ecto-sp13_S_contig14916.3741.1 vs. uniprot
Match: A0A162PM64_PHYB8 (Transketolase n=1 Tax=Phycomyces blakesleeanus (strain ATCC 8743b / DSM 1359 / FGSC 10004 / NBRC 33097 / NRRL 1555) TaxID=763407 RepID=A0A162PM64_PHYB8) HSP 1 Score: 243 bits (619), Expect = 1.720e-72 Identity = 129/226 (57.08%), Postives = 156/226 (69.03%), Query Frame = 1
Query: 1 SALSKFGVVYVMTHDSIGLGEDGPTHQPVEVMELLRSTPNMMAFRPADGNEVTGSYICAMEAGSTPSVLALSRQNCPHLTGTSAELVAKGAYTLCEHGPGGAPDVILAATGSEVHICVDVAKALGASGTQARVVSMPCWELFEKQDEAYQLQVFPAGSPVMSVEAGGTQGWERWAHAPFGMARFGASAPYKPLYEKFGYTVENLTKQASAFPKLATKVAEFYKAKG 678
SALS V+YVMTHDSIGLGEDGPTHQP+E + L R+TPNM+ FRPADGNEV+G+Y+ A+E PSV+ALSRQN P+L G+S E+V KGAY L GP A + ATGSEV I V+ AKAL G ARV+SMPC ELF+ Q E Y+ VF G PV+S+EA GT GWER++H GM FGASAP K LY+KFG T E+ +A KV +Y+ G
Sbjct: 454 SALSHHRVIYVMTHDSIGLGEDGPTHQPIETLALTRATPNMLTFRPADGNEVSGTYLAAIENQHRPSVIALSRQNLPNLVGSSVEIVRKGAYVLS--GPKDAK-IAFVATGSEVEIAVNAAKALAQEGVAARVISMPCSELFDDQSEEYKKSVFAPGIPVISIEALGTFGWERYSHTSIGMKTFGASAPIKDLYKKFGITPEDAVAKAH-------KVIAYYEKVG 669
BLAST of mRNA_Ecto-sp13_S_contig14916.3741.1 vs. uniprot
Match: A0A0L0HLC9_SPIPD (Transketolase n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0HLC9_SPIPD) HSP 1 Score: 241 bits (614), Expect = 8.990e-72 Identity = 127/235 (54.04%), Postives = 159/235 (67.66%), Query Frame = 1
Query: 1 SALSKFGVVYVMTHDSIGLGEDGPTHQPVEVMELLRSTPNMMAFRPADGNEVTGSYICAMEAGSTPSVLALSRQNCPHLTGTSAELVAKGAYTLCEHGPGGAPDVILAATGSEVHICVDVAKALGASGTQARVVSMPCWELFEKQDEAYQLQVFPAGSPVMSVEAGGTQGWERWAHAPFGMARFGASAPYKPLYEKFGYTVENLTKQASAFPKLATKVAEFYKAKGGAQSLVQRV 705
SALSK V+Y+MTHDSIGLGEDGPTHQP+E + +R+ PN++ FRPADGNEV+GSY+ ++EA PSVL L+RQN P L G+S E V KGAY L E P P VIL ATGSEV + VD A L + ARVVSMPCWELFE+Q YQ VF G PV+S+EA T GW++WAH G+ FGAS PYK LY+KFG + + +A K+ FYK + ++ +QR+
Sbjct: 453 SALSKHHVLYIMTHDSIGLGEDGPTHQPIETLACMRAMPNILNFRPADGNEVSGSYLVSLEAHDRPSVLILTRQNLPQLAGSSIEAVRKGAYVL-EDAPN--PSVILVATGSEVSLAVDTAAQLASENIAARVVSMPCWELFEEQSVEYQQSVFLDGVPVVSIEAMSTFGWQKWAHLTCGIDTFGASGPYKDLYKKFGLVPDVIAAKAK-------KLIAFYKDRK-PENKIQRI 676 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14916.3741.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig14916.3741.1 >prot_Ecto-sp13_S_contig14916.3741.1 ID=prot_Ecto-sp13_S_contig14916.3741.1|Name=mRNA_Ecto-sp13_S_contig14916.3741.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=247bp SALSKFGVVYVMTHDSIGLGEDGPTHQPVEVMELLRSTPNMMAFRPADGNback to top mRNA from alignment at Ecto-sp13_S_contig14916:1344..3921- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig14916.3741.1 ID=mRNA_Ecto-sp13_S_contig14916.3741.1|Name=mRNA_Ecto-sp13_S_contig14916.3741.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2578bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14916:1344..3921- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig14916:1344..3921- >mRNA_Ecto-sp13_S_contig14916.3741.1 ID=mRNA_Ecto-sp13_S_contig14916.3741.1|Name=mRNA_Ecto-sp13_S_contig14916.3741.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=741bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14916:1344..3921- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |