mRNA_Ecto-sp13_S_contig14880.3716.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig14880.3716.1
Unique NamemRNA_Ecto-sp13_S_contig14880.3716.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig14880.3716.1 vs. uniprot
Match: A0A6H5KV27_9PHAE (Hydroxymethylglutaryl-CoA reductase (NADPH) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV27_9PHAE)

HSP 1 Score: 692 bits (1787), Expect = 1.400e-239
Identity = 498/613 (81.24%), Postives = 505/613 (82.38%), Query Frame = 1
Query:    1 GNAMGMNMISKGCEAAVREIQKRFKQARLVALSGNVCTDKKPSAQNWVEGRGKSVVAEAVLSAKTVSSVLKTTVDQMVECNISKNLVGSAMAGSIGGFNSHAANV----VAAVFLATGQDPAHTVEGSSCITLMEKVKPDEEGSDGGRPGDLRVTVTMPSLLVGTVGGGTGLPAQSACLRLMGCGQSVEDAGGDGXXXXXXXXXXXXXXXXXHDGAQMGSQKVGVAGDAASVPGHPSANGXXXXXXXXXXXXXXXXXXXSSIPGSIDEDTXXXXXXXXXXXXXXEQRTAIGLVAEAAAATSPLPGVIAAAVADEAAITPIARVGDNSVDAAAETPLPPAAXXXXXXXXXXXXXXXRSGXXGDSPGSSSPGNPREKGARRLACVIAATVMAGELSLLAALTSNDLVRAHMTLNRKKKGGAPGASAGAVSAGGGSVGTAFAXXXXXXXXXXXXTGTAPXATXXXXXXXXXXXX---------GGSTRATSPRAAGRGSAAPRVQQPAGESGTGG-GGIDAHAGGSGAGGSESGRLDVFPAAAPTDATDETESVESTSPDLQXXXXXXXXRSSGVTEVSPLPSSETWQNSGASASAADPPHQGAQVLMQMQMEGVP 1797
            GNAMGMNMISKGCEAAVREIQKRFKQARLVALSGNVCTDKK SAQNWVEGRGKSVVAEAVLSAKTVSSVLKTTVD+MVECNISKNLVGSAMAGSIGGFNSHAANV     +AVFLATGQDPAHTVEGSSCITLMEKVKP EEGS GGRPGDLRVTVTMPSLLVGTVGGGTGLPAQSACLRLMGCGQSVEDAGGDG  XXXXXXXXXXXX    DGAQ+GSQK GV GDA SVPGHPSA G   XXXXXXXXXXXXXXX  SIPGSIDEDT   XXXXXXX    EQ TAIGLVAEAAAA SPLPGVIAAAVADEAA TPIAR GD  V   A+TPLPPAA               +SGXX   PGSSS   PREKGARRLACVIAATVMAGELSLLAALTSNDLVRAHM LNRKK GGAPGASAGAVSAG    G AFA     XXXXXXX     X  XXXXXXXXXXXX         GGSTRA S R AG GS APRVQQPA ESG GG GGIDAHAGGSGA GSESGRL VFPAAAPT ATDE ES +STSPDLQXXXXXXXX S+GVTEV PLPSSET QNSG SASAAD PHQGAQ LMQMQMEG P
Sbjct:  119 GNAMGMNMISKGCEAAVREIQKRFKQARLVALSGNVCTDKKASAQNWVEGRGKSVVAEAVLSAKTVSSVLKTTVDKMVECNISKNLVGSAMAGSIGGFNSHAANVRLFLSSAVFLATGQDPAHTVEGSSCITLMEKVKPGEEGSGGGRPGDLRVTVTMPSLLVGTVGGGTGLPAQSACLRLMGCGQSVEDAGGDGGVXXXXXXXXXXXX----DGAQIGSQKAGVDGDAVSVPGHPSAKGENGXXXXXXXXXXXXXXX--SIPGSIDEDTGGNXXXXXXXDGSGEQPTAIGLVAEAAAAISPLPGVIAAAVADEAATTPIARAGDCPVGVVADTPLPPAATPGKGKGKAPGAGARKSGXXXXXPGSSSAA-PREKGARRLACVIAATVMAGELSLLAALTSNDLVRAHMALNRKK-GGAPGASAGAVSAGNFG-GNAFAPSPQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAVPAGGSTRAASTRGAGGGSVAPRVQQPAWESGAGGSGGIDAHAGGSGADGSESGRLGVFPAAAPTQATDEAESEDSTSPDLQXXXXXXXXXSNGVTEVPPLPSSETSQNSGVSASAADRPHQGAQALMQMQMEGAP 722          
BLAST of mRNA_Ecto-sp13_S_contig14880.3716.1 vs. uniprot
Match: D8LK73_ECTSI (Hydroxymethylglutaryl-CoA reductase (NADPH) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK73_ECTSI)

HSP 1 Score: 400 bits (1027), Expect = 1.550e-126
Identity = 315/550 (57.27%), Postives = 317/550 (57.64%), Query Frame = 1
Query:    1 GNAMGMNMISKGCEAAVREIQKRFKQARLVALSGNVCTDKKPSAQNWVEGRGKSVVAEAVLSAKTVSSVLKTTVDQMVECNISKNLVGSAMAGSIGGFNSHAANVVAAVFLATGQDPAHTVEGSSCITLMEKVKPDEEGSDGG-RPGDLRVTVTMPSLLVGTVGGGTGLPAQSACLRLMGCGQSVEDAGGDGXXXXXXXXXXXXXXXXXHDGAQMGSQKVGVAGDAASVPGHPSANGXXXXXXXXXXXXXXXXXXXSSIPGSIDEDTXXXXXXXXXXXXXXEQRTAIGLVAEAAAATSPLPGVIAAAVADEAAITPIARVGDNSVDAAAETPLPPAAXXXXXXXXXXXXXXXRSGXXGDSPGSSSPGNPREKGARRLACVIAATVMAGELSLLAALTSNDLVRAHMTLNRKKKGGAPGASAGAVSAGGGSVGTAFAXXXXXXXXXXXXTGTAPXATXXXXXXXXXXXXGGSTRATSPRAAGRGSAAP--RVQQPAGESGTGGG--GIDAHAGGSGAGGSESGRLDVFPAAAPTDATDETESVESTSPDLQ 1635
            GNAMGMNMISKGCEAAVREIQKRFKQARLVALSGNVCTDKK SAQNWVEGRGKSVVAEAVLSAKTVSSVLKTTVDQMVECNISKNLVGSAMAGSIGGFNSHAANVVAAVFLATGQDPAHTVEGSSCITLMEKVKP EEGS GG RPGDLRVTVTMPSLL                                                                                                                                                        AA TP AR GD+SV AAAETPLPPAA         XXXXXX   XX           PREKGARRLACVIAATVMAGELSLLAALTSNDLVRAHM LNRKK GGAPGASAGAV AG    G AFA         XXX     X  XXXXXXXXXXXX                     RVQQPAGESGTGG   GIDAHAGGSGA GSESGRLDVFPAAAPT+ATDETES ESTSPDLQ
Sbjct:  326 GNAMGMNMISKGCEAAVREIQKRFKQARLVALSGNVCTDKKASAQNWVEGRGKSVVAEAVLSAKTVSSVLKTTVDQMVECNISKNLVGSAMAGSIGGFNSHAANVVAAVFLATGQDPAHTVEGSSCITLMEKVKPGEEGSGGGGRPGDLRVTVTMPSLL--------------------------------------------------------------------------------------------------------------------------------------------------------AATTPNARAGDSSVGAAAETPLPPAATPGKGKGKAXXXXXXXXXXXXXXXXXXXXXXPREKGARRLACVIAATVMAGELSLLAALTSNDLVRAHMALNRKK-GGAPGASAGAVGAGSVFFGAAFAPSPQAAPAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVQQPAGESGTGGXXXGIDAHAGGSGADGSESGRLDVFPAAAPTEATDETESEESTSPDLQ 722          
BLAST of mRNA_Ecto-sp13_S_contig14880.3716.1 vs. uniprot
Match: A0A3R7LV10_9TRYP (3-hydroxy-3-methylglutaryl coenzyme A reductase n=1 Tax=Trypanosoma conorhini TaxID=83891 RepID=A0A3R7LV10_9TRYP)

HSP 1 Score: 222 bits (565), Expect = 5.260e-62
Identity = 116/190 (61.05%), Postives = 139/190 (73.16%), Query Frame = 1
Query:    1 GNAMGMNMISKGCEAAVREIQKRFKQARLVALSGNVCTDKKPSAQNWVEGRGKSVVAEAVLSAKTVSSVLKTTVDQMVECNISKNLVGSAMAGSIGGFNSHAANVVAAVFLATGQDPAHTVEGSSCITLMEKVKPDEEGSDGGRPGDLRVTVTMPSLLVGTVGGGTGLPAQSACLRLMGCGQSVEDAGGD 570
            G+AMGMNMI+KG + A+  +Q++F   R++ALSGN CTDKKPSA NW+EGRGKSVVAEA + A  V   LK TVD +V  N+ KNLVGSAMAGS+GGFN+ AAN VAA+FLATGQDPA  VE S+C+T M KV             DL +TVTMPS+ VGTVGGGTGL AQ  CL LMGCG S ++  G+
Sbjct:  216 GDAMGMNMITKGVDRAMSLLQQQFPSMRVIALSGNYCTDKKPSAVNWIEGRGKSVVAEATVLADVVEETLKCTVDSLVSLNVDKNLVGSAMAGSVGGFNAQAANAVAAIFLATGQDPAQVVESSTCLTSMSKVG-----------NDLLITVTMPSIEVGTVGGGTGLVAQRGCLELMGCGGSSKETPGE 394          
BLAST of mRNA_Ecto-sp13_S_contig14880.3716.1 vs. uniprot
Match: A0A067CTZ6_SAPPC (3-hydroxy-3-methylglutaryl coenzyme A reductase n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CTZ6_SAPPC)

HSP 1 Score: 219 bits (559), Expect = 1.420e-61
Identity = 111/180 (61.67%), Postives = 139/180 (77.22%), Query Frame = 1
Query:    1 GNAMGMNMISKGCEAAVREIQKRFKQARLVALSGNVCTDKKPSAQNWVEGRGKSVVAEAVLSAKTVSSVLKTTVDQMVECNISKNLVGSAMAGSIGGFNSHAANVVAAVFLATGQDPAHTVEGSSCITLMEKVKPDEEGSDGGRPGDLRVTVTMPSLLVGTVGGGTGLPAQSACLRLMGC 540
            GNAMGMNM+SKG  A +  +Q+RF    LVA+SGNVCTDKK +A NW++GRGKSVVA+AV+ A  V+ +L TTVD++V+ N+ KNLVGSAMAG++GGFN+HAAN++ A+FLATGQDPA  VE SSC+T++EK K           GDL ++VTMPS+ VGTVGGGT L  Q ACL LMGC
Sbjct:  175 GNAMGMNMVSKGTLAVLGHLQERFPDMELVAISGNVCTDKKSAAINWIDGRGKSVVADAVVKADVVARILHTTVDKLVDLNLQKNLVGSAMAGALGGFNAHAANILTAIFLATGQDPAQNVESSSCMTMLEKTK----------DGDLYISVTMPSIEVGTVGGGTHLGPQQACLGLMGC 344          
BLAST of mRNA_Ecto-sp13_S_contig14880.3716.1 vs. uniprot
Match: A0A2G5B406_COERN (3-hydroxy-3-methylglutaryl coenzyme A reductase n=1 Tax=Coemansia reversa (strain ATCC 12441 / NRRL 1564) TaxID=763665 RepID=A0A2G5B406_COERN)

HSP 1 Score: 220 bits (561), Expect = 6.640e-61
Identity = 112/180 (62.22%), Postives = 141/180 (78.33%), Query Frame = 1
Query:    1 GNAMGMNMISKGCEAAVREIQKRFKQARLVALSGNVCTDKKPSAQNWVEGRGKSVVAEAVLSAKTVSSVLKTTVDQMVECNISKNLVGSAMAGSIGGFNSHAANVVAAVFLATGQDPAHTVEGSSCITLMEKVKPDEEGSDGGRPGDLRVTVTMPSLLVGTVGGGTGLPAQSACLRLMGC 540
            G+AMGMNMISKGCE A+R IQ+RF    +VA+SGN CTDKKP+A NW++GRGKSVV+EA++    V SVLK++VD +   N+SKNL+GSAMAG++GGFN+HAAN + AVFLATGQDPA  VE S+CITLME   P  +G D      LR++ +MPS+ VGTVGGGT LP Q+ACL ++GC
Sbjct:  234 GDAMGMNMISKGCEQALRLIQERFADCDVVAVSGNYCTDKKPAAINWIDGRGKSVVSEAIIPGAVVRSVLKSSVDDLCRLNVSKNLIGSAMAGALGGFNAHAANTLTAVFLATGQDPAQNVESSTCITLME---PANDGQD------LRISCSMPSIEVGTVGGGTVLPPQAACLDMLGC 404          
BLAST of mRNA_Ecto-sp13_S_contig14880.3716.1 vs. uniprot
Match: UPI00072DE95A (3-hydroxy-3-methylglutaryl-coenzyme A reductase-like n=1 Tax=Poecilia mexicana TaxID=48701 RepID=UPI00072DE95A)

HSP 1 Score: 217 bits (552), Expect = 9.750e-61
Identity = 110/179 (61.45%), Postives = 138/179 (77.09%), Query Frame = 1
Query:    1 GNAMGMNMISKGCEAAVREIQKRFKQARLVALSGNVCTDKKPSAQNWVEGRGKSVVAEAVLSAKTVSSVLKTTVDQMVECNISKNLVGSAMAGSIGGFNSHAANVVAAVFLATGQDPAHTVEGSSCITLMEKVKPDEEGSDGGRPGDLRVTVTMPSLLVGTVGGGTGLPAQSACLRLMG 537
            G+AMGMNMISKG E A+  +Q+ F + ++VA+SGN CTDKKP+A NW+EGRGKS V EA +SAK V  VLKTT + ++E NISKNLVGSAMAGSIGGFN+HAAN+VAA+++A GQDPA +V  S+CITLME   P  +        DL ++ TMPS+ VGTVGGGT LP Q ACL+++G
Sbjct:  163 GDAMGMNMISKGTEKALSRLQQHFPELQVVAVSGNYCTDKKPAAINWIEGRGKSAVCEATISAKVVQEVLKTTTEALIEVNISKNLVGSAMAGSIGGFNAHAANLVAAIYIACGQDPAQSVSSSNCITLMEPSGPTGK--------DLYISCTMPSIEVGTVGGGTNLPPQQACLKMLG 333          
BLAST of mRNA_Ecto-sp13_S_contig14880.3716.1 vs. uniprot
Match: A0A7S1GAM2_9STRA (3-hydroxy-3-methylglutaryl coenzyme A reductase (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GAM2_9STRA)

HSP 1 Score: 219 bits (558), Expect = 2.480e-60
Identity = 116/179 (64.80%), Postives = 141/179 (78.77%), Query Frame = 1
Query:    1 GNAMGMNMISKGCEAAVREIQKRFKQARLVALSGNVCTDKKPSAQNWVEGRGKSVVAEAVLSAKTVSSVLKTTVDQMVECNISKNLVGSAMAGSIGGFNSHAANVVAAVFLATGQDPAHTVEGSSCITLMEKVKPDEEGSDGGRPGDLRVTVTMPSLLVGTVGGGTGLPAQSACLRLMG 537
            G+AMGMNMISKG  AA+  + + F  ARL++LSGN CTDKKPSA NW+EGRGK+V  EAV+ A  V +VLKT VD++VE N++KNL+GSA+AGSIGG+N+HAAN+V+AVFLATGQD A  VE S+C+TLMEK  PD         G L  +VTMPS+ VGTVGGGT LPAQSACLRL+G
Sbjct:  237 GDAMGMNMISKGVSAALDSLAEEFPNARLLSLSGNACTDKKPSAINWIEGRGKTVTCEAVIPADIVRTVLKTNVDKLVELNVAKNLIGSAVAGSIGGYNAHAANIVSAVFLATGQDVAQNVESSTCMTLMEK-DPDT--------GALIASVTMPSIEVGTVGGGTSLPAQSACLRLLG 406          
BLAST of mRNA_Ecto-sp13_S_contig14880.3716.1 vs. uniprot
Match: A0A6I9NQ43_9TELE (3-hydroxy-3-methylglutaryl-coenzyme A reductase n=1 Tax=Notothenia coriiceps TaxID=8208 RepID=A0A6I9NQ43_9TELE)

HSP 1 Score: 213 bits (542), Expect = 3.880e-60
Identity = 112/190 (58.95%), Postives = 139/190 (73.16%), Query Frame = 1
Query:    1 GNAMGMNMISKGCEAAVREIQKRFKQARLVALSGNVCTDKKPSAQNWVEGRGKSVVAEAVLSAKTVSSVLKTTVDQMVECNISKNLVGSAMAGSIGGFNSHAANVVAAVFLATGQDPAHTVEGSSCITLMEKVKPDEEGSDGGRPGDLRVTVTMPSLLVGTVGGGTGLPAQSACLRLMGCGQSVEDAGGD 570
            G+AMGMNMISKG E A+  +Q+ F   +++A+SGN CTDKKP+A NW+EGRGKS V EA + AK V  VLKTT   +VE NISKNLVGSAMAGSIGGFN+HA+N+VAA+++A GQDPA +V  S+CITLME   P  E        DL +T TMPS+ +GTVGGGT LP Q ACLR++G   +  D  G+
Sbjct:   78 GDAMGMNMISKGTEQALSILQQHFPDVQVIAVSGNFCTDKKPAAINWIEGRGKSAVCEATIPAKVVREVLKTTTAALVEVNISKNLVGSAMAGSIGGFNAHASNLVAAIYIACGQDPAQSVGSSNCITLMEASGPTGE--------DLYITCTMPSIELGTVGGGTSLPPQQACLRMLGVQGASLDCPGE 259          
BLAST of mRNA_Ecto-sp13_S_contig14880.3716.1 vs. uniprot
Match: L8GQW8_ACACA (3-hydroxy-3-methylglutaryl coenzyme A reductase n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GQW8_ACACA)

HSP 1 Score: 216 bits (551), Expect = 4.570e-60
Identity = 112/178 (62.92%), Postives = 137/178 (76.97%), Query Frame = 1
Query:    1 GNAMGMNMISKGCEAAVREIQKRFKQARLVALSGNVCTDKKPSAQNWVEGRGKSVVAEAVLSAKTVSSVLKTTVDQMVECNISKNLVGSAMAGSIGGFNSHAANVVAAVFLATGQDPAHTVEGSSCITLMEKVKPDEEGSDGGRPGDLRVTVTMPSLLVGTVGGGTGLPAQSACLRLM 534
            G+AMGMNM+SKG E A+  IQ+ F    +V+LSGN CTDKKPS+ NW+EGRGKSVV EA++    V SVLKTTV  MVE N  KNL+GSAMAGSIGGFN+HAAN+V A+F+ATGQDPA  VE S+C+T+ME   P ++G+D      L ++ TMPS+ VGTVGGGT LPAQSACL L+
Sbjct:  208 GDAMGMNMLSKGTEKALAFIQQAFPDMLIVSLSGNYCTDKKPSSMNWIEGRGKSVVCEAIIKGDVVESVLKTTVRAMVELNTQKNLIGSAMAGSIGGFNAHAANIVTAIFIATGQDPAQNVESSNCLTIME---PTDDGND------LYISCTMPSIEVGTVGGGTHLPAQSACLDLL 376          
BLAST of mRNA_Ecto-sp13_S_contig14880.3716.1 vs. uniprot
Match: A0A7J6BVF0_9TELE (3-hydroxy-3-methylglutaryl coenzyme A reductase n=1 Tax=Onychostoma macrolepis TaxID=369639 RepID=A0A7J6BVF0_9TELE)

HSP 1 Score: 216 bits (550), Expect = 5.180e-60
Identity = 112/179 (62.57%), Postives = 140/179 (78.21%), Query Frame = 1
Query:    1 GNAMGMNMISKGCEAAVREIQKRFKQARLVALSGNVCTDKKPSAQNWVEGRGKSVVAEAVLSAKTVSSVLKTTVDQMVECNISKNLVGSAMAGSIGGFNSHAANVVAAVFLATGQDPAHTVEGSSCITLMEKVKPDEEGSDGGRPGDLRVTVTMPSLLVGTVGGGTGLPAQSACLRLMG 537
            G+AMGMNM+SKG E A+  +Q+R+   R++A+SGN CTDKKP+A NW+ GRGKS V EAV+ A+ +  VLK++   +VE NISKNLVGSAMAGSIGGFN+HAAN+VAA+++A GQDPA TV  S+CITLME V     G DG    DL V+ TMPSL +GTVGGGTGLPAQ ACL+++G
Sbjct:  185 GDAMGMNMLSKGTEQALSRLQERYPDMRMLAVSGNYCTDKKPAAVNWIHGRGKSTVCEAVVPARVIKEVLKSSTAALVELNISKNLVGSAMAGSIGGFNAHAANIVAAIYIACGQDPAQTVGSSNCITLMECV-----GMDGE---DLYVSCTMPSLELGTVGGGTGLPAQHACLQMLG 355          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14880.3716.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KV27_9PHAE1.400e-23981.24Hydroxymethylglutaryl-CoA reductase (NADPH) n=1 Ta... [more]
D8LK73_ECTSI1.550e-12657.27Hydroxymethylglutaryl-CoA reductase (NADPH) n=1 Ta... [more]
A0A3R7LV10_9TRYP5.260e-6261.053-hydroxy-3-methylglutaryl coenzyme A reductase n=... [more]
A0A067CTZ6_SAPPC1.420e-6161.673-hydroxy-3-methylglutaryl coenzyme A reductase n=... [more]
A0A2G5B406_COERN6.640e-6162.223-hydroxy-3-methylglutaryl coenzyme A reductase n=... [more]
UPI00072DE95A9.750e-6161.453-hydroxy-3-methylglutaryl-coenzyme A reductase-li... [more]
A0A7S1GAM2_9STRA2.480e-6064.803-hydroxy-3-methylglutaryl coenzyme A reductase (F... [more]
A0A6I9NQ43_9TELE3.880e-6058.953-hydroxy-3-methylglutaryl-coenzyme A reductase n=... [more]
L8GQW8_ACACA4.570e-6062.923-hydroxy-3-methylglutaryl coenzyme A reductase n=... [more]
A0A7J6BVF0_9TELE5.180e-6062.573-hydroxy-3-methylglutaryl coenzyme A reductase n=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14880contigEcto-sp13_S_contig14880:1149..4088 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score402.9
Seed ortholog evalue2.8e-109
Seed eggNOG ortholog2880.D8LK73
Preferred nameHMGR
Model size1959
KEGG rclassRC00004,RC00644
KEGG koko:K00021
KEGG ReactionR02082
KEGG Pathwayko00900,ko01100,ko01110,ko01130,ko04152,ko04976,map00900,map01100,map01110,map01130,map04152,map04976
KEGG ModuleM00095
Hectar predicted targeting categoryother localisation
Exons4
EggNOG free text desc.hydroxymethylglutaryl-CoA reductase (NADPH) activity
EggNOG OGsCOG1257@1,KOG2480@2759
Ec32 ortholog descriptionHydroxymethylglutaryl-CoA reductase (NADPH)
Ec32 orthologEc-08_002990.1
EC1.1.1.34
Cds size1950
COG Functional cat.I
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462793.8194568-CDS-Ecto-sp13_S_contig14880:1148..12441681462793.8194568-CDS-Ecto-sp13_S_contig14880:1148..1244Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14880 1149..1244 -
1681462793.8297844-CDS-Ecto-sp13_S_contig14880:1340..28911681462793.8297844-CDS-Ecto-sp13_S_contig14880:1340..2891Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14880 1341..2891 -
1681462793.8377397-CDS-Ecto-sp13_S_contig14880:3372..35161681462793.8377397-CDS-Ecto-sp13_S_contig14880:3372..3516Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14880 3373..3516 -
1681462793.845674-CDS-Ecto-sp13_S_contig14880:3920..40791681462793.845674-CDS-Ecto-sp13_S_contig14880:3920..4079Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14880 3921..4079 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462793.8536081-UTR-Ecto-sp13_S_contig14880:4079..40881681462793.8536081-UTR-Ecto-sp13_S_contig14880:4079..4088Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig14880 4080..4088 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14880.3716.1prot_Ecto-sp13_S_contig14880.3716.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig14880 1149..4079 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig14880.3716.1

>prot_Ecto-sp13_S_contig14880.3716.1 ID=prot_Ecto-sp13_S_contig14880.3716.1|Name=mRNA_Ecto-sp13_S_contig14880.3716.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=650bp
MGMNMISKGCEAAVREIQKRFKQARLVALSGNVCTDKKPSAQNWVEGRGK
SVVAEAVLSAKTVSSVLKTTVDQMVECNISKNLVGSAMAGSIGGFNSHAA
NVVAAVFLATGQDPAHTVEGSSCITLMEKVKPDEEGSDGGRPGDLRVTVT
MPSLLVGTVGGGTGLPAQSACLRLMGCGQSVEDAGGDGGVDDGGGGGGGG
GVGGGHDGAQMGSQKVGVAGDAASVPGHPSANGGNGGGGGGGGGGDGGGG
SGSSIPGSIDEDTGGNDGGGGGGDGSGEQRTAIGLVAEAAAATSPLPGVI
AAAVADEAAITPIARVGDNSVDAAAETPLPPAAASGKGKGKAAGAGARRS
GGGGDSPGSSSPGNPREKGARRLACVIAATVMAGELSLLAALTSNDLVRA
HMTLNRKKKGGAPGASAGAVSAGGGSVGTAFAPSPAPAPAPAPATGTAPA
ATPAAASLAVAVPAGGSTRATSPRAAGRGSAAPRVQQPAGESGTGGGGID
AHAGGSGAGGSESGRLDVFPAAAPTDATDETESVESTSPDLQQQEEQEEE
RSSGVTEVSPLPSSETWQNSGASASAADPPHQGAQVLMQMQMEGVPPPES
GKANYSQQQEEEEEEEPQQQQQQQQQQPDRSTAAAAASSAAAGEATGPP*
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mRNA from alignment at Ecto-sp13_S_contig14880:1149..4088-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig14880.3716.1 ID=mRNA_Ecto-sp13_S_contig14880.3716.1|Name=mRNA_Ecto-sp13_S_contig14880.3716.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2940bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14880:1149..4088- (Ectocarpus species13 EcNAP12_S_4_19m)
GGGAACGCCATGGGCATGAACATGATCAGCAAAGGCTGCGAGGCCGCGGT GCGAGAGATCCAGAAGCGATTCAAGCAGGCGAGACTCGTGGCGTTATCGG GCAACGTGTGCACCGACAAGAAGCCGTCGGCGCAGAACTGGGTCGAAGGG CGAGGAAAGTCTGTCGTGGTGAGGCTTGCTGCTTACAAGAAACCTTTGGG GGCTCGGTGTACCGTGTGTGTCTGTGTGTGTGCGTGTGTGTTTACGTTTG GCATCGACCGCGCAAACCGGCTGACCAATGATAAGTCGCTGGTCGTAGTG CGGTTGACACAAGAAAGGGTCCAAAAGGTCATGATCTGGGATCTCGTGAG GGGGCGCCATGGAGGAGGCTAAGCTACCCTACGGATTAAAAGAAGTCCTT GTGTGTGTTTCGGTAGGTAACATCGACCGCGCTACTTTAATAGCCGGCTG AACAAGACGTTACCCTCAGCGCGGCAAAAACGTGTGTGTACATTCCATCA CCGACGAGAAACGGAACCTTGGCTTGCACCATATTTTTCTACGTTCCATC ATTTTCACGGAATTCCGCGCAGGCCGAGGCGGTGCTGTCGGCGAAAACCG TGTCGTCCGTCCTGAAGACCACGGTGGACCAGATGGTGGAGTGCAACATC TCCAAGAACCTCGTCGGGTCAGCCATGGCCGGAAGCATTGGCGGCTTTAA CTCGCACGCCGCGAACGTGAGACTTTTTCTATCATGGTGCTTTTTTTTGT TTTTTTTGGTAGTAGTGACACCTCTCCTCGTTGCATGACGATGTGCTCGT CGTCACCAACAACCTCCGCCGCAGCTGTCCCAGCCAATAGGTCTTGTTGG ATAACGAAGACCGCTAGCCCCCCATACTGTTGGTATTTGGTCATGGGCGC TTCTGCTCTCGCCGTGATGTTGTGTGCTGTACCATCGTGTTTGTAATGAT TATTCCGGGTCTTGGTTTGTTTTCTACTGAAGGAGTCCCCATCAGTTGGT CCGGTACTAATGTTGGAAGGCACTGAGCAGAGATCGGAACGGCTTTCCAA AGCAAATATCACCAACAACACCACCACCAACACCGCCAACAGCAACAACT ACCACAGCCGCACCACCACCACCAATACAACATGACGACGTCATCCTCGC GGCACACCACATCCCGCGCGCGCTTCTTTGTTTCTTTTTCGCGCCAGGTG GTAGCCGCCGTCTTCCTGGCCACGGGTCAAGACCCCGCCCACACCGTCGA GGGCAGTAGCTGCATCACGCTCATGGAGAAGGTGAAGCCCGACGAGGAAG GGAGCGACGGCGGCCGGCCCGGCGATCTCCGTGTGACGGTGACGATGCCG TCGCTTCTGGTGGGTACCGTCGGCGGCGGCACCGGCCTCCCCGCGCAGTC CGCGTGCCTCCGGCTGATGGGTTGCGGCCAGTCCGTCGAGGACGCTGGTG GTGATGGTGGCGTTGATGATGGTGGTGGTGGTGGTGGTGGTGGTGGGGTT GGTGGTGGTCATGATGGTGCACAGATGGGCTCTCAGAAAGTCGGGGTTGC TGGGGATGCAGCGAGTGTTCCTGGCCATCCGAGCGCTAACGGCGGGAACG GCGGCGGCGGCGGCGGCGGCGGTGGCGGAGATGGCGGCGGTGGCAGCGGC AGCAGCATCCCGGGCAGCATCGACGAAGACACCGGCGGCAACGACGGTGG CGGTGGTGGCGGCGATGGCAGCGGTGAACAGCGCACGGCTATCGGCCTTG TCGCCGAGGCCGCCGCGGCGACATCCCCGCTCCCCGGCGTCATCGCCGCC GCCGTCGCCGATGAGGCTGCGATTACCCCGATCGCTAGGGTCGGCGACAA CTCGGTGGACGCAGCGGCGGAAACTCCCCTGCCGCCAGCTGCAGCTTCAG GAAAAGGCAAGGGCAAGGCAGCGGGGGCGGGGGCTCGAAGGTCCGGCGGC GGCGGTGATTCACCAGGAAGTTCGTCCCCCGGTAACCCCCGAGAGAAGGG CGCCAGGCGCTTGGCTTGCGTGATTGCGGCGACCGTAATGGCGGGAGAGC TGTCCCTGTTGGCGGCGTTGACCTCGAACGACCTCGTCAGGGCACACATG ACCCTGAACAGGAAGAAGAAGGGGGGGGCACCTGGTGCCAGCGCCGGCGC CGTTAGCGCTGGTGGTGGCTCTGTTGGGACCGCGTTCGCTCCGAGCCCAG CACCAGCACCAGCACCAGCACCAGCAACAGGAACAGCACCAGCAGCAACT CCTGCTGCCGCTTCGTTAGCGGTTGCAGTACCGGCTGGCGGGTCGACAAG AGCGACTTCTCCGCGAGCTGCGGGAAGAGGGAGCGCAGCACCCAGGGTCC AACAGCCGGCTGGGGAGAGTGGTACCGGCGGCGGCGGCATCGATGCACAC GCCGGCGGCAGTGGTGCTGGTGGCAGCGAATCGGGAAGGTTGGATGTCTT CCCCGCGGCCGCTCCCACGGATGCAACCGATGAGACAGAGAGCGTGGAGT CCACCAGCCCGGACCTGCAACAGCAGGAGGAGCAGGAGGAGGAACGGTCG AGTGGAGTGACAGAGGTATCACCTCTACCGTCATCGGAGACGTGGCAAAA CTCAGGCGCTTCTGCGTCTGCTGCCGACCCACCACACCAGGGTGCACAAG TCCTGATGCAGATGCAGATGGAAGGGGTACCGCCGCCGGAATCGGGAAAG GCAAACTACTCGCAGCAGCAGGAGGAAGAGGAGGAGGAGGAGCCTCAAGT GGTGATGCAGCCGGAAGCGATGCAGCCGGGGCCGGCGGCGATGCACGCGG CTGTTCAAACGGCTCCAAGACTGGACGTGGGCGGTTGCGAGCAGCAGCAG CAGCAGCAGCAGCAGCAGCAGCCGGATAGATCGACAGCGGCGGCGGCGGC ATCATCAGCAGCGGCAGGGGAGGCAACGGGACCACCTTAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig14880:1149..4088-

>mRNA_Ecto-sp13_S_contig14880.3716.1 ID=mRNA_Ecto-sp13_S_contig14880.3716.1|Name=mRNA_Ecto-sp13_S_contig14880.3716.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1950bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14880:1149..4088- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGGCATGAACATGATCAGCAAAGGCTGCGAGGCCGCGGTGCGAGAGAT
CCAGAAGCGATTCAAGCAGGCGAGACTCGTGGCGTTATCGGGCAACGTGT
GCACCGACAAGAAGCCGTCGGCGCAGAACTGGGTCGAAGGGCGAGGAAAG
TCTGTCGTGGCCGAGGCGGTGCTGTCGGCGAAAACCGTGTCGTCCGTCCT
GAAGACCACGGTGGACCAGATGGTGGAGTGCAACATCTCCAAGAACCTCG
TCGGGTCAGCCATGGCCGGAAGCATTGGCGGCTTTAACTCGCACGCCGCG
AACGTGGTAGCCGCCGTCTTCCTGGCCACGGGTCAAGACCCCGCCCACAC
CGTCGAGGGCAGTAGCTGCATCACGCTCATGGAGAAGGTGAAGCCCGACG
AGGAAGGGAGCGACGGCGGCCGGCCCGGCGATCTCCGTGTGACGGTGACG
ATGCCGTCGCTTCTGGTGGGTACCGTCGGCGGCGGCACCGGCCTCCCCGC
GCAGTCCGCGTGCCTCCGGCTGATGGGTTGCGGCCAGTCCGTCGAGGACG
CTGGTGGTGATGGTGGCGTTGATGATGGTGGTGGTGGTGGTGGTGGTGGT
GGGGTTGGTGGTGGTCATGATGGTGCACAGATGGGCTCTCAGAAAGTCGG
GGTTGCTGGGGATGCAGCGAGTGTTCCTGGCCATCCGAGCGCTAACGGCG
GGAACGGCGGCGGCGGCGGCGGCGGCGGTGGCGGAGATGGCGGCGGTGGC
AGCGGCAGCAGCATCCCGGGCAGCATCGACGAAGACACCGGCGGCAACGA
CGGTGGCGGTGGTGGCGGCGATGGCAGCGGTGAACAGCGCACGGCTATCG
GCCTTGTCGCCGAGGCCGCCGCGGCGACATCCCCGCTCCCCGGCGTCATC
GCCGCCGCCGTCGCCGATGAGGCTGCGATTACCCCGATCGCTAGGGTCGG
CGACAACTCGGTGGACGCAGCGGCGGAAACTCCCCTGCCGCCAGCTGCAG
CTTCAGGAAAAGGCAAGGGCAAGGCAGCGGGGGCGGGGGCTCGAAGGTCC
GGCGGCGGCGGTGATTCACCAGGAAGTTCGTCCCCCGGTAACCCCCGAGA
GAAGGGCGCCAGGCGCTTGGCTTGCGTGATTGCGGCGACCGTAATGGCGG
GAGAGCTGTCCCTGTTGGCGGCGTTGACCTCGAACGACCTCGTCAGGGCA
CACATGACCCTGAACAGGAAGAAGAAGGGGGGGGCACCTGGTGCCAGCGC
CGGCGCCGTTAGCGCTGGTGGTGGCTCTGTTGGGACCGCGTTCGCTCCGA
GCCCAGCACCAGCACCAGCACCAGCACCAGCAACAGGAACAGCACCAGCA
GCAACTCCTGCTGCCGCTTCGTTAGCGGTTGCAGTACCGGCTGGCGGGTC
GACAAGAGCGACTTCTCCGCGAGCTGCGGGAAGAGGGAGCGCAGCACCCA
GGGTCCAACAGCCGGCTGGGGAGAGTGGTACCGGCGGCGGCGGCATCGAT
GCACACGCCGGCGGCAGTGGTGCTGGTGGCAGCGAATCGGGAAGGTTGGA
TGTCTTCCCCGCGGCCGCTCCCACGGATGCAACCGATGAGACAGAGAGCG
TGGAGTCCACCAGCCCGGACCTGCAACAGCAGGAGGAGCAGGAGGAGGAA
CGGTCGAGTGGAGTGACAGAGGTATCACCTCTACCGTCATCGGAGACGTG
GCAAAACTCAGGCGCTTCTGCGTCTGCTGCCGACCCACCACACCAGGGTG
CACAAGTCCTGATGCAGATGCAGATGGAAGGGGTACCGCCGCCGGAATCG
GGAAAGGCAAACTACTCGCAGCAGCAGGAGGAAGAGGAGGAGGAGGAGCC
TCAACAGCAGCAGCAGCAGCAGCAGCAGCAGCCGGATAGATCGACAGCGG
CGGCGGCGGCATCATCAGCAGCGGCAGGGGAGGCAACGGGACCACCTTAG
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