mRNA_Ecto-sp13_S_contig1488.3714.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
|
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1488.3714.1 vs. uniprot
Match: A0A6H5K7Y3_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7Y3_9PHAE) HSP 1 Score: 2145 bits (5557), Expect = 0.000e+0 Identity = 1245/1509 (82.50%), Postives = 1279/1509 (84.76%), Query Frame = 1
Query: 349 MAVARVLDGEDSKRMVKVMALFAIAKNTMAPD----------------------------------LVAPSVAQLAPAVARTMRMESTVARQQSAMAIHNLLGSVPGAMARCDPGRADRPEEEDSFWVRCLLRLCFDDAVKVRADALKAAERAVSLGGLRGNAGIAAWVLEALRDGRLSQGMNRLLFYDASSQSQAVTTAAAGGADPLPHTSGSSLPAAASDKTNPRQATPQRVKHAIRVWAVHLSLADPASLLRAKDSAGKKRLLDVGTGLFTWLSGKSADGRDDVKVQAVESWEMFAVSMMTQIGREEAKKVAHMFLRALSRWVLKEKGVVREVAMSSLMRVVASFPSTSLKPLWTTTWKGDKKSKGLGEVLRDVAGGSSGEIARHHSARILAALLPCFCLRLAEPHPLLRDAGLNLGEELPLLLSILETLMEAFPSPIPEDAASAVDAAAPLXXXXXXXXXXXXXXXCCADVRLEVLPTTGLIANAWCGLAFWAMEQAAAAVLDVEGTXXXXXXXXXXXXXXXXXXXXXXXXXXXTTAAASDLRKEGSGPSSSSAALPKENEASEASRPLQVLLEWLLGGRARPSRGTGAKVTTVTEKAVQGGSTAEGRGKAAANSASSPTTDRLARWKEALLAALIRGLSRRLDVQKAEAEAGADDADAKLSERAWLDAPVDSSSVFDGTSCAGDCSACTECSPAGGVIRQSISRKWQKSETPLWLVLLTGVLRGRCGTEYRCLDGGGSGGSGGGSRVVREACHKGNPRHEPGVATDGTCRGGESACQFSPVFLPQPFLAGALSLSPGGWPAQLLASLLSGVRSAKGRTQEEEEDLALVVAGRVWRAEAARNLAEWNRGLPLSTDSYVVAAGAGFDGGAQGVKPGGDRYRGVPVAPHARTVGISAAGADVQQXXXXXXXXXX---PSENLRTATANTLRFLLHAACALFSRPPEGNTRSQSKESEGAAGQATEPENRTVVSTGVQNEAREAVGVAKHNGNLRGGALGGWSEGGKRSAAVESVFGAEAARLWLGLFEARKNSPAQPKGFSKLVKALAKDCGTCAFVVSWGPLGGGKGGXXXXXXXXXXXXAVWGLDFSQTQPXXXXXXXXXXXRTGQQEPGDFASSTQGDKTDGAAATRHDKRSNTDHPGXXXXXXXXXXXXXXXXFVALPVLAAAALALLTAAPAEADAKARGRAWKAGSATLAWTLTAAAAAPGTTAWPPPASPSTTQRSSAAGVAPGEEGATVPAEVCRCLYAVRSWLTVAAXXXXXXXXXXXLNRSSSSGTAGFPLDRDSLAPVYRLLAVAVRTSYSXXXXXXXXXXXXXXXXXPEFSSGSLVRAAPSSSTASGTEMVVAADPAVRLEIRGLVACALSASRKVAASPELLTALSPLLEAVLDVPRSSCDADSLQSSLLDVWNATFGKINLKQPPAPAWKAAFSPALLQRLSDLSRRAEVDMPRGITLPVLDTVAAPPTAATTLGRGCSGLSEGSKGVXXXXXXXEESARGGGEEREYSQPES 4764
MAVARVLDGEDS RMVKVMALFAIAKNTM PD LVAPSVAQLAPAVARTMRMESTVARQQSAMAIH+LLGSVPGAMARCDPGRADRPEEEDSFWVRCLLRLCFDDAVKVRADALKAAERAVSLGGLRGNAGIAAWV+EALRDGRLSQGMNR+LFYDASSQSQA TTAAAGGADPLPH SGSS PAAASDKTNPRQATPQRVKHAIRVWAVHLSLADPASLLRA+D+AGKKRLLDVGTGLFTWL GKSADGRDDVKVQAVESWEMFAVSMM QIGR+EAKKVAHMFLRALSRWVLKEKGVVREVAMSSLMRVVASFPS SLKPLWTTTWKGDKKSKGLGEVLRDVAGGSSGEIARHHSAR+LAALLPCFCLR AEPHPLLRDAGLNL EELPLLLS+LETLMEAFPSPIPEDAASAVDAAAP XX X X CCADVRLEVLPTTGLIANAWCGLAFWAMEQAAAA LDVEGT T AAASD RKEGSGPSSSSAA P+ENEASE S+PLQVLLEWLLG RARPS GT AKVTTVTEKAV GGSTAEGRGKAAANSASSPTTDRLARWKEALLAALIRGLSRRLDVQ EAEAGADDA+AKL RAWLDAPVDSSSVFDG CAGDC AC EC PAGGVIRQSISRKW KSETPLWLVLLTGVLRGRCG EYRCLDGG SRVVREACHKGNPRHE G ATDGT GGESACQFSPVFLPQ FLAGALSLSPGGWPAQLLASLL+G RSAKGRTQEEE DLALVVAGRVWRAEAARNLAEWNR LPLSTDSYV AAGAGFDGG QGV PGGDRY+G PVAPHARTVG SAAG DVQ+XXXXXXXXXX PS+NLRT TANTLRF LHAAC+LFS PPEGNTRSQSKE +GA GQA + E+R STGVQNE +A H+GNLRGGA GGWSEGGKRS AVES FGAEAARLWLGLFEAR+NSPAQPKGFSKLVKAL+KDCG CAFV SWGPLGGGKGG WGLDFSQTQP XXXXXXXXX RTGQ+E GDFASS QGDKT GAAA R+DKRSNTDHP X FVALPVLAAAALALLTAAPAEADAKARGRAWKAGSATLAWTLTAAAAAPGTTAWPPPAS Q SSAAG+A GEEGATVPAEVC+CL AV S L VAAXXXXXXXXXXXLNRSSSSGTAGFPLD DSLAPV RLLAVAVRTSYS XXXXXXXXXX PE SSGSLVRA+ SSSTASGTE+VVAADPAVRLEIRGLVACALSASRKVAASP LLTALSPLLEAVLDVP SSCDADSLQSSLLDVWNATFGK+NLKQPPAPAWKAAFSPALL+RLSDLSRRAEV+MP GITLPVLDT AAP TA G SGLSEG+KG +ESAR GGE R YSQPES
Sbjct: 1 MAVARVLDGEDSTRMVKVMALFAIAKNTMPPDRKPHHFDGGPGACSTSSRDDPISSAKTKLDADVVLVAPSVAQLAPAVARTMRMESTVARQQSAMAIHSLLGSVPGAMARCDPGRADRPEEEDSFWVRCLLRLCFDDAVKVRADALKAAERAVSLGGLRGNAGIAAWVVEALRDGRLSQGMNRVLFYDASSQSQAATTAAAGGADPLPHASGSSSPAAASDKTNPRQATPQRVKHAIRVWAVHLSLADPASLLRARDTAGKKRLLDVGTGLFTWLCGKSADGRDDVKVQAVESWEMFAVSMMAQIGRDEAKKVAHMFLRALSRWVLKEKGVVREVAMSSLMRVVASFPSISLKPLWTTTWKGDKKSKGLGEVLRDVAGGSSGEIARHHSARVLAALLPCFCLRPAEPHPLLRDAGLNLDEELPLLLSMLETLMEAFPSPIPEDAASAVDAAAPXXXPXSXSSRGAEEENCCADVRLEVLPTTGLIANAWCGLAFWAMEQAAAAGLDVEGTGKGKSGAADAGEFASDNQDGSGKGHGNTAAAASDCRKEGSGPSSSSAAPPQENEASETSQPLQVLLEWLLGVRARPSTGTSAKVTTVTEKAVPGGSTAEGRGKAAANSASSPTTDRLARWKEALLAALIRGLSRRLDVQDNEAEAGADDANAKLPGRAWLDAPVDSSSVFDGRLCAGDCPACAECLPAGGVIRQSISRKWLKSETPLWLVLLTGVLRGRCGLEYRCLDGGXXXXXXXXSRVVREACHKGNPRHESGSATDGTRGGGESACQFSPVFLPQSFLAGALSLSPGGWPAQLLASLLTGARSAKGRTQEEE-DLALVVAGRVWRAEAARNLAEWNRCLPLSTDSYVGAAGAGFDGGVQGVTPGGDRYKGGPVAPHARTVGTSAAGVDVQKXXXXXXXXXXXXQPSKNLRTDTANTLRFSLHAACSLFSHPPEGNTRSQSKEPKGATGQACDLESRAAGSTGVQNEG---AAIADHDGNLRGGASGGWSEGGKRSVAVESFFGAEAARLWLGLFEARRNSPAQPKGFSKLVKALSKDCGNCAFVASWGPLGGGKGGAGEGGSSAVPPPGAWGLDFSQTQPPXXXXXXXXXPRTGQRESGDFASSMQGDKTAGAAAMRYDKRSNTDHPEGKKQNGGGDALAPPXPFVALPVLAAAALALLTAAPAEADAKARGRAWKAGSATLAWTLTAAAAAPGTTAWPPPASXXXXQWSSAAGLAAGEEGATVPAEVCQCLCAVHSCLKVAAXXXXXXXXXXXLNRSSSSGTAGFPLDGDSLAPVCRLLAVAVRTSYSTAXXXXXXXXXXDAG--PESSSGSLVRASFSSSTASGTEVVVAADPAVRLEIRGLVACALSASRKVAASPGLLTALSPLLEAVLDVPSSSCDADSLQSSLLDVWNATFGKLNLKQPPAPAWKAAFSPALLRRLSDLSRRAEVEMPPGITLPVLDTAAAP-TATMAQGLRDSGLSEGNKGAEEGGIAVDESARAGGEARGYSQPES 1502
BLAST of mRNA_Ecto-sp13_S_contig1488.3714.1 vs. uniprot
Match: D8LJ95_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ95_ECTSI) HSP 1 Score: 1912 bits (4954), Expect = 0.000e+0 Identity = 1255/1559 (80.50%), Postives = 1284/1559 (82.36%), Query Frame = 1
Query: 1258 MSSLMRVVASFPSTSLKPLWTTTWKGDKKSKGLGEVLRDVAGGSSGEIARHHSARILAALLPCFCLRLAEPHPLLRDAGLNLGEELPLLLSILETLMEAFPSPIPEDAASAVDAAAPLXXXXXXXXXXXXXXX-CCADVRLEVLPTTGLIANAWCGLAFWAMEQAAAAVLDVEGTXXXXXXXXXXXXXXXXXXXXXXXXXXXTTAAASDLRKEGSGPSSSSAALPKENEASEASRPLQVLLEWLLGGRARPSRGTGAKVTTVTEKAVQGGSTAEGRGKAAANSASSPTTDRLARWKEALLAALIRGLSRRLDVQKAEAEAGADDADAKLSERAWLDAPVDSSSVFDGTSCAGDCSACTECSPAGGVIRQSISRKWQKSETPLWLVLLTGVLRGRCGTEYRCLDGGGSGGSGGGSRVVREACHKGNPRHEPGVATDGTCRGGESACQFSPVFLPQPFLAGALSLSPGGWPAQLLASLLSGVRSAKGRTQEEEEDLALVVAGRVWRAEAARNLAEWNRGLPLSTDSYVVAAGAGFDGGAQGVKPGGDRYRGVPVAPHARTVGISAAGADVQQXXXXXXXXXXPSENLRTATANTLRFLLHAACALFSRPPEGNTRSQSKESEGAAGQATEPENRTVVSTGVQNEAREAVGVAKHNGNLRGGALGGWSEGGKRSAAVESVFGAEAARLWLGLFEARKNSPAQPKGFSKLVKALAKDCGTCAFVVSWGPLGGGKGGXXXXXXXXXXXXAVWGLDFSQTQPXXXXXXXXXXXRTGQQEPGDFASSTQGDKTDGAAATRHDKRSNTDHPGXXXXXXXXXXXXXXXXFVALPVLAAAALALLTAAPAEADAKARGRAWKAGSATLAWTLTAAAAAPGTTAWPPPASPSTTQRSS------AAGVAPGEEGATVPAEVCRCLYAVRSWLTVAAXXXXXXXXXXXLNRSSSSGTAGFPLDRDSLAPVYRLLAVAVRTSYSXXXXXXXXXXXXXXXXXPEFSSGSLVRAAPSSSTASGTEMVVAADPAVRLEIRGLVACALSASRKVAASPELLTALSPLLEAVLDVPRSSCDADSLQSSLLDVWNATFGKINLKQPPAPAWKAAFSPALLQRLSDLSRRAEVDMPRGITLPVLDTVAAPPTAATTLGRGCSGLSEGSKGVXXXXXXXEESARGGGEEREYSQPESAAVGDLRA---GVKGARGRALPGCAWNGGVAGALPAEGGRRSFMKQTSRSPSPSQSRPVATPKKRSSSSPTSHDAGSGFSGKFVRVIGNGRGSGGNRGTPKRRAAVTTHTSLDGSQSIAPWEDGSQLPDTNPDSGPDLPLEEALPXXXXXXPRNRVTATTAPQAPSASTSPATAETTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDRRVRPRIMTFASVGGSSGGRDDADGFGHDCSSSKADTAAAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------------------PSSGQQRGRGDGVAVDALLQDVRSLARRVEAARSAMSPEQLEEVGALLQKAVES 5850
MSSLMRVVASFPSTSLKPLWTTTWKGDKKSKGLGEVLRDVAGGSSGEIA HHSARILAALLPCFCL AEPHPLLRDAGLNLGEELPLLLSILETLMEAFPSPIPEDAASAVDAAAP XXXXXXXXXXXXXXX CCADVRLEVLPT+GLIANAWCGLAFWAMEQAAAA LDV+GT X XXXXXXXXXXXXXXXXXXX T AAA D RKEGSGPSSSSAA PKENEASEA RPLQVLLEWLLG RARPS GTGAKVTTVTEKAV GGSTAEGRGKAAAN ASSPTTDRLARWK ALLAALIRGLSRRLDVQ AE EAGADDADAKL ERAWLDAPVDSSSVFDG SCAGDC AC EC PAGGVIRQSISRKW KSETPLWLVLLTGVLRGRCG EYRCLDG G GGSGG SRVVREACHKGNPRHEPGVATDGT GG SACQFSPVFL Q FL GALSLSPGGWPAQLLASLL+GVRSAKGRTQEEE DLALVVAGRVWRAEAARNLAEWNR LPLSTDSYV AAGAGFDGGAQGV GGDRYRG PVAPHARTVGIS +GADVQQ PSENLRTATANTLRFLLHAAC+LFSRPPE NTRSQSKESEGAAGQA +P NRTVVSTGVQNEAREAVGVA+H+GNLRG GWS+GGKRSAAVESVFGAE ARLWLGLFEAR+NSPAQPKGFSKLVKALAKDCG CAFVVS GPLGG XXXXXXXXXXXXAVWGLDFSQTQP XXXX RTGQ+EPGDFASSTQGDKT GAAATR+DK SNTDHP FVALPVLAAAALALLTAAPAEADAKA+GRAWKAGSATLAWTLTAA AGVA GEEGAT+PAEVC+CL AVRS LTVA NRSSSSGTAGFPLDRDSLAPV RLLAVAVRTSY+ PE S GSL++AAPSSSTA G E VVAADPAVR EIRGLVACALSASRKVAASP LLTALSPLLEAVLDV SSCDADSLQSSLLDVWNATFGKINLKQPPAPAWKAAFSP+LL+RLSDLS+RAEV+MPRGITLPVLDTVAAPPTA T G SGLSEG+KG EESARGG E R+YSQPESAAVGDLRA G GARGRA GCAWNGGVAGALPA+GGRRSFMKQ SRSPSPSQS PVATPKKRS S PTS D G GFSGKF+RV+GNGRGSGGNRGTPKRRAAVTTHTSLDGSQSIAPWEDGSQLPDTNPDSGPDLPLEE LP PR+ VTATTAPQAPS XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RPRIMT ASVGG+SGGRDDADGFGHD DT XXXXXXXXXXXXXXXXXXXXXX X P SGQQRGRG GVAVDALLQDVRSLARRVEAARSAMSPEQLEEVGALLQKAVES
Sbjct: 1 MSSLMRVVASFPSTSLKPLWTTTWKGDKKSKGLGEVLRDVAGGSSGEIAWHHSARILAALLPCFCLPPAEPHPLLRDAGLNLGEELPLLLSILETLMEAFPSPIPEDAASAVDAAAPXXXXXXXXXXXXXXXXXCCADVRLEVLPTSGLIANAWCGLAFWAMEQAAAAGLDVQGTGKGXSGPXXXXXXXXXXXXXXXXXXXNTAAAARDCRKEGSGPSSSSAAPPKENEASEAGRPLQVLLEWLLGVRARPSTGTGAKVTTVTEKAVPGGSTAEGRGKAAANPASSPTTDRLARWKVALLAALIRGLSRRLDVQNAETEAGADDADAKLPERAWLDAPVDSSSVFDGWSCAGDCPACAECLPAGGVIRQSISRKWLKSETPLWLVLLTGVLRGRCGLEYRCLDGSGGGGSGGESRVVREACHKGNPRHEPGVATDGTRGGGGSACQFSPVFLSQSFLGGALSLSPGGWPAQLLASLLTGVRSAKGRTQEEE-DLALVVAGRVWRAEAARNLAEWNRCLPLSTDSYVGAAGAGFDGGAQGVTLGGDRYRGGPVAPHARTVGISVSGADVQQKQQQRQ----PSENLRTATANTLRFLLHAACSLFSRPPERNTRSQSKESEGAAGQACDPGNRTVVSTGVQNEAREAVGVAEHDGNLRGEDSRGWSQGGKRSAAVESVFGAETARLWLGLFEARRNSPAQPKGFSKLVKALAKDCGNCAFVVSGGPLGGXXXXXXXXXXXXXXXXAVWGLDFSQTQPPSQXXXXQP--RTGQREPGDFASSTQGDKTAGAAATRYDKCSNTDHPEGKKQNGGGDTLAPPPPFVALPVLAAAALALLTAAPAEADAKAKGRAWKAGSATLAWTLTAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAGVAAGEEGATIPAEVCQCLGAVRSCLTVAVAAAADSAGGGP-NRSSSSGTAGFPLDRDSLAPVCRLLAVAVRTSYATAGGAAAAADAG-----PEPSPGSLIQAAPSSSTAVGIE-VVAADPAVRPEIRGLVACALSASRKVAASPGLLTALSPLLEAVLDVSSSSCDADSLQSSLLDVWNATFGKINLKQPPAPAWKAAFSPSLLRRLSDLSQRAEVEMPRGITLPVLDTVAAPPTATTAQGLRGSGLSEGNKGAEGGGIAVEESARGGSEARDYSQPESAAVGDLRAAAAGGGGARGRASSGCAWNGGVAGALPAKGGRRSFMKQASRSPSPSQSHPVATPKKRSPS-PTSPDGG-GFSGKFIRVVGNGRGSGGNRGTPKRRAAVTTHTSLDGSQSIAPWEDGSQLPDTNPDSGPDLPLEEVLPPPP---PRSGVTATTAPQAPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPRIMTSASVGGASGGRDDADGFGHDQGGD--DTVXXXXXXXXXXXXXXXXXXXXXXXXXKEVATMAAIAKAMPSGGXGRHRHVEVESEMSEMMSSAQAPPSGQQRGRGGGVAVDALLQDVRSLARRVEAARSAMSPEQLEEVGALLQKAVES 1538
BLAST of mRNA_Ecto-sp13_S_contig1488.3714.1 vs. uniprot
Match: D8LJ94_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ94_ECTSI) HSP 1 Score: 707 bits (1825), Expect = 2.160e-234 Identity = 374/403 (92.80%), Postives = 382/403 (94.79%), Query Frame = 1
Query: 28 HVNNMEQLLKKLAGCWRESAAGGDVARLELYQAITAKGLSGDDEESTSRAFERQRGAILRVLVREDCQSSCDDIQKSALELVGHVVAMASSCEGPACQPSQQASALWMAVARVLDGEDSKRMVKVMALFAIAKNTMAPDLVAPSVAQLAPAVARTMRMESTVARQQSAMAIHNLLGSVPGAMARCDPGRADRPEEEDSFWVRCLLRLCFDDAVKVRADALKAAERAVSLGGLRGNAGIAAWVLEALRDGRLSQGMNRLLFYDASSQSQAVTTAAAGGADPLPHTSGSSLPAAASDKTNPRQATPQRVKHAIRVWAVHLSLADPASLLRAKDSAGKKRLLDVGTGLFTWLSGKSADGRDDVKVQAVESWEMFAVSMMTQIGREEAKKVAHMFLRALSRWVLKEK 1236
HVNNMEQLLKKLAGCW ESAAGGDVARLELYQAITAKGLSGDDEESTSRAFERQRGAILRVL SSCDDIQKSALEL+GH+VAMASSCEGPACQPSQ AS+LWMAVARVLDGEDSKRMVKVMALFAIAKNTMAPDLVAPSVAQLAPAVA+TMRMESTVARQQSAMAIH+LLGSVPGAMARCDPGRADRPEEEDSFWVRCLLRLCFDDAVKVRADALKAAERAVSLGGLRGNAGIAAWVLEALRDGRLSQGM+R+LFYDASSQSQA AAG ADPLPH GSS AAA D+TNPRQATPQRVKHAIRVWAVHLSLADP LLRAKDSAGKKRLLDVGTGLFTWLSGKSADGRDDVKVQAVESWEMFAVSMM QIGREEAKKVAHMFLRALSRWVLKEK
Sbjct: 3 HVNNMEQLLKKLAGCWHESAAGGDVARLELYQAITAKGLSGDDEESTSRAFERQRGAILRVL------SSCDDIQKSALELLGHIVAMASSCEGPACQPSQ-ASSLWMAVARVLDGEDSKRMVKVMALFAIAKNTMAPDLVAPSVAQLAPAVAQTMRMESTVARQQSAMAIHSLLGSVPGAMARCDPGRADRPEEEDSFWVRCLLRLCFDDAVKVRADALKAAERAVSLGGLRGNAGIAAWVLEALRDGRLSQGMSRVLFYDASSQSQATVPGAAGEADPLPHALGSSSTAAAPDRTNPRQATPQRVKHAIRVWAVHLSLADPTRLLRAKDSAGKKRLLDVGTGLFTWLSGKSADGRDDVKVQAVESWEMFAVSMMAQIGREEAKKVAHMFLRALSRWVLKEK 398
BLAST of mRNA_Ecto-sp13_S_contig1488.3714.1 vs. uniprot
Match: A0A6H5JWJ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWJ5_9PHAE) HSP 1 Score: 181 bits (460), Expect = 1.270e-49 Identity = 92/97 (94.85%), Postives = 94/97 (96.91%), Query Frame = 1
Query: 40 MEQLLKKLAGCWRESAAGGDVARLELYQAITAKGLSGDDEESTSRAFERQRGAILRVLVREDCQSSCDDIQKSALELVGHVVAMASSCEGPACQPSQ 330
MEQLLKKLA CW ESAAGGDVARLELYQAITAKGL+GDDEESTSRAFERQRGAILRVLVR DCQSSCDDIQKSALEL+GHVVAMASSCEGPACQPSQ
Sbjct: 1 MEQLLKKLADCWHESAAGGDVARLELYQAITAKGLAGDDEESTSRAFERQRGAILRVLVR-DCQSSCDDIQKSALELLGHVVAMASSCEGPACQPSQ 96
BLAST of mRNA_Ecto-sp13_S_contig1488.3714.1 vs. uniprot
Match: A0A6H5L7N1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7N1_9PHAE) HSP 1 Score: 97.8 bits (242), Expect = 1.050e-19 Identity = 94/148 (63.51%), Postives = 97/148 (65.54%), Query Frame = 1
Query: 5458 MTFASVGGSSGGRDDADGFGHDCSSSKADTAAA-----------------VXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSSGQQRGRGDGVAVDALLQDVRSLARRVEAARSAMSPEQLEEVGALLQKAVES 5850
MT ASVGG+SGGRDDADGFGHD DT+ XXX XXXXXXXXXXXXXXXXXXX P S QQRGRG GVAVDALLQDVRSLARR+EAARSAMSPEQLEEVGALLQKAVES
Sbjct: 1 MTSASVGGASGGRDDADGFGHD---QGDDTSMGGXXXXXXXXXXVXXXXXXXXXEKEVATMAAIAKAMPSGGXXXXXXXXXXXXXXXXXXXAQAPPSVQQRGRGGGVAVDALLQDVRSLARRLEAARSAMSPEQLEEVGALLQKAVES 145 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1488.3714.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1488.3714.1 >prot_Ecto-sp13_S_contig1488.3714.1 ID=prot_Ecto-sp13_S_contig1488.3714.1|Name=mRNA_Ecto-sp13_S_contig1488.3714.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=1938bp MEQLLKKLAGCWRESAAGGDVARLELYQAITAKGLSGDDEESTSRAFERQback to top mRNA from alignment at Ecto-sp13_S_contig1488:63..13812- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1488.3714.1 ID=mRNA_Ecto-sp13_S_contig1488.3714.1|Name=mRNA_Ecto-sp13_S_contig1488.3714.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=13750bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1488:63..13812- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1488:63..13812- >mRNA_Ecto-sp13_S_contig1488.3714.1 ID=mRNA_Ecto-sp13_S_contig1488.3714.1|Name=mRNA_Ecto-sp13_S_contig1488.3714.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=5814bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1488:63..13812- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |