mRNA_Ecto-sp13_S_contig14866.3706.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig14866.3706.1 vs. uniprot
Match: A0A6H5JK02_9PHAE (Beta_helix domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK02_9PHAE) HSP 1 Score: 525 bits (1353), Expect = 1.770e-181 Identity = 243/252 (96.43%), Postives = 250/252 (99.21%), Query Frame = 1
Query: 1 GNRQPRDHTNEKGVAYKSAVDGVVVKNMKIYNCGGEGIRIRYFVTNCVVFHNRITSTGCYDFKFDEGDHGTKNGEGIYVGTSSKQWSKNVTDEPDICRWTRIYENYIDTHGNECVDVKEGAVDTVIETNYCTGQLDEDSSGIDSRASSTTIRYNKVVGCKGAGVRLGGHKVGREQYGINCKVYCNILENNEYAGVKVMTEPNEICQNTVSGSDKAFRGDAAKSFEEGSECPFDVKPPQQDIETTRWFQNCKP 756
GNRQPRDHTNEKGVAYKSAVDGVV+KNMKIYNCGGEGIRIRYFVTNCV+FHNRITSTGCYDFKFD G+HG KNGEGIYVGTSSKQW+KNVTDEPD+CRWTRIYENYIDTHGNECVDVKEGAVDTVIETNYCTGQLDEDS+GIDSRASSTTIRYNKVVGCKGAGVRLGGHKVGREQYGINCKVYCNILENNEYAGVKVMTEPNEICQNT+SGSDKAFRGDAAKSFEEGSECPFDVKPPQQDIETTRWFQNCKP
Sbjct: 470 GNRQPRDHTNEKGVAYKSAVDGVVIKNMKIYNCGGEGIRIRYFVTNCVLFHNRITSTGCYDFKFDGGEHGVKNGEGIYVGTSSKQWNKNVTDEPDVCRWTRIYENYIDTHGNECVDVKEGAVDTVIETNYCTGQLDEDSAGIDSRASSTTIRYNKVVGCKGAGVRLGGHKVGREQYGINCKVYCNILENNEYAGVKVMTEPNEICQNTISGSDKAFRGDAAKSFEEGSECPFDVKPPQQDIETTRWFQNCKP 721
BLAST of mRNA_Ecto-sp13_S_contig14866.3706.1 vs. uniprot
Match: D7G073_ECTSI (Putative nosD copper-binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G073_ECTSI) HSP 1 Score: 439 bits (1130), Expect = 2.340e-151 Identity = 204/210 (97.14%), Postives = 209/210 (99.52%), Query Frame = 1
Query: 1 GNRQPRDHTNEKGVAYKSAVDGVVVKNMKIYNCGGEGIRIRYFVTNCVVFHNRITSTGCYDFKFDEGDHGTKNGEGIYVGTSSKQWSKNVTDEPDICRWTRIYENYIDTHGNECVDVKEGAVDTVIETNYCTGQLDEDSSGIDSRASSTTIRYNKVVGCKGAGVRLGGHKVGREQYGINCKVYCNILENNEYAGVKVMTEPNEICQNTVS 630
GNRQPRDHTNEKGVAYKSAVDGVVVKNMKIYNCGGEGIRIRYFVTNCV+FHNRITSTGCYDFKFDEGDHG KNGEGIYVGTSSKQWSKNVTDEPDICRWTRIYENYIDTHGNECVDVKEGAVDTVIETNYCTGQLDE+S+GIDSRASSTTIRYNKVVGCKGAGVRLGGHKVGREQYG+NCKVYCNILENNEYAGVKVMTEPNEICQNT+S
Sbjct: 157 GNRQPRDHTNEKGVAYKSAVDGVVVKNMKIYNCGGEGIRIRYFVTNCVLFHNRITSTGCYDFKFDEGDHGVKNGEGIYVGTSSKQWSKNVTDEPDICRWTRIYENYIDTHGNECVDVKEGAVDTVIETNYCTGQLDEESAGIDSRASSTTIRYNKVVGCKGAGVRLGGHKVGREQYGVNCKVYCNILENNEYAGVKVMTEPNEICQNTIS 366
BLAST of mRNA_Ecto-sp13_S_contig14866.3706.1 vs. uniprot
Match: D7G3L7_ECTSI (FirrV-1-B30 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3L7_ECTSI) HSP 1 Score: 209 bits (533), Expect = 2.770e-62 Identity = 106/221 (47.96%), Postives = 146/221 (66.06%), Query Frame = 1
Query: 37 GVAYKSAVDGVVVKNMKIYNCGGEGIRIRYFVTNCVVFHNRITSTGCYDFKFDEGDHGTKNGEGIYVGTSSKQWS--KNVTDEPDICRWTRIYENYIDTHGNECVDVKEGAVDTVIETNYCTGQLDEDSSGIDSRASSTTIRYNKVVGCKGAGVRLGGHKVGREQYGINCKVYCNILENNEYAGVKVMTEPN-EICQNTVSGSDKAFRGD--AAKSFEEGS 684
G ++S+++G+V+ NM I NCGGE +R+RYFVT V++NRIT+ G +DF D G +KNGEGIY+GTSS QW KN +DEPD + ++N+ DT GNE +D+KEG+ ++E NYCTGQ D +S+ +D+R S R+N GAG+R+GGHK+ QYG N +VY N+LENN+YAG+K+ P +C N + GS RG A K EGS
Sbjct: 146 GHKFRSSINGLVLSNMDINNCGGECVRMRYFVTYSQVYNNRITNCGTHDFVMDGG---SKNGEGIYLGTSSNQWDDGKNPSDEPDESSYNHFFKNHFDTQGNEGIDIKEGSRYNIVEDNYCTGQKDPNSACLDARGDSNIFRFNTCEDNLGAGIRIGGHKIDGHQYGQNNEVYENLLENNDYAGIKITMSPQGAVCSNDILGSKYDSRGSSYAEKLSPEGS 363
BLAST of mRNA_Ecto-sp13_S_contig14866.3706.1 vs. uniprot
Match: A0A6H5JFC7_9PHAE (PPIase cyclophilin-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFC7_9PHAE) HSP 1 Score: 203 bits (517), Expect = 1.320e-56 Identity = 100/212 (47.17%), Postives = 140/212 (66.04%), Query Frame = 1
Query: 28 NEKGVAYKSAVDGVVVKNMKIYNCGGEGIRIRYFVTNCVVFHNRITSTGCYDFKFDEGDHGTKNGEGIYVGTSSKQWS--KNVTDEPDICRWTRIYENYIDTHGNECVDVKEGAVDTVIETNYCTGQLDEDSSGIDSRASSTTIRYNKVVGCKGAGVRLGGHKVGREQYGINCKVYCNILENNEYAGVKVMTEPN-EICQNTVSGSDKAFRG 654
N G ++S+++G+V+ NM I NCGGE +R+RYFVT V++NRIT+ G +D+ + +KNGEGIY+GTSS QW KN +DEPD + ++N+ DT GNE +D+KEGA ++E NYCTGQ D +S+ +D+R S R+N GAG+R+GGHK+ QYG N +VY N+LENN YAG+K+ P +C N + GS RG
Sbjct: 447 NFNGHKFRSSINGLVLSNMDINNCGGECVRMRYFVTYSQVYNNRITNCGTHDYVMNGS---SKNGEGIYLGTSSNQWDDGKNPSDEPDESSYNHFFKNHFDTQGNEGIDIKEGARYNIVEDNYCTGQKDPNSACLDARGDSNIFRFNTCEDNLGAGIRIGGHKIDGHQYGQNNEVYENLLENNGYAGIKITMSPQGAVCSNDILGSKYDSRG 655
BLAST of mRNA_Ecto-sp13_S_contig14866.3706.1 vs. uniprot
Match: A0A6H5L3G3_9PHAE (Beta_helix domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3G3_9PHAE) HSP 1 Score: 194 bits (492), Expect = 1.440e-55 Identity = 108/212 (50.94%), Postives = 136/212 (64.15%), Query Frame = 1
Query: 4 NRQPRDHTNEKGVAYKSAVDGVVVKNMKIYNCGGEGIRIRYFVTNCVVFHNRITSTGCYDFKFDEGDHGTKNGEGIYVGTSSKQWS--KNVTDEPDICRWTRIYENYIDTHGNECVDVKEGAVDTVIETNYCTGQLDEDSSGIDSRASSTTIRYNKVVGCKGAGVRLGGHKVGREQYGINCKVYCNILENNEYAGVKVMTEPN-EICQNTVS 630
NR+P E+ Y SA+DG+V++NM + N GGE IR+R VTN V+ N IT G YDF+ ++GD KNGEG+YVGTSSKQW KN D PD+C I NYI T GNE +DVKEG VDT+IE N Q D+DS GI SR + IRYN + GAGVRLGGH V +YG N +VY N + + ++ VKVM +P +IC N V+
Sbjct: 140 NREPT----ERAGGYISAIDGLVIRNMAVTNAGGECIRLRDHVTNAEVYSNHITDCGIYDFR-EDGDG--KNGEGVYVGTSSKQWDSDKNWDDVPDVCMGNIIRGNYIRTRGNEGIDVKEGTVDTLIEYNEVYMQYDDDSGGIGSRGDRSIIRYNHIEDTDGAGVRLGGHTVDGIEYGKNNQVYGNTMVDCRHSAVKVMVDPQGQICNNDVT 344
BLAST of mRNA_Ecto-sp13_S_contig14866.3706.1 vs. uniprot
Match: Q6XM06_9PHYC (FirrV-1-B30 n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XM06_9PHYC) HSP 1 Score: 198 bits (504), Expect = 2.000e-55 Identity = 98/214 (45.79%), Postives = 138/214 (64.49%), Query Frame = 1
Query: 37 GVAYKSAVDGVVVKNMKIYNCGGEGIRIRYFVTNCVVFHNRITSTGCYDFKFDEGDHGTKNGEGIYVGTSSKQWS--KNVTDEPDICRWTRIYENYIDTHGNECVDVKEGAVDTVIETNYCTGQLDEDSSGIDSRASSTTIRYNKVVGCKGAGVRLGGHKVGREQYGINCKVYCNILENNEYAGVKVMTEPNEI-CQNTVSGSDKAFRGDAAKS 669
G+ Y+S++ GV++++M++ +CGGE IR+R FVT+ V NRI G +D+ FD KNGE IYVGTSS QW+ KN PD ++ I++N IDT NECVDVKEG+ D ++E N C+ QLD +S+G DSR T RYN+V C GAG+R+GGHK+ + YG N + Y N++ NN Y+ +KV T + CQN +G+ A+S
Sbjct: 152 GIEYESSITGVIIEDMEVEDCGGECIRLRSFVTHAEVTGNRIERCGRHDYLFDGAG---KNGEAIYVGTSSNQWNDGKNSKSGPDKTKYIWIHDNVIDTQANECVDVKEGSTDVLVEYNACSNQLDTNSAGFDSRTDDVTFRYNEVSNCAGAGIRIGGHKIDGKTYGENNEAYGNVMRNNAYSAIKVETGKQHVFCQNDCGKEGCTVKGNRAES 362
BLAST of mRNA_Ecto-sp13_S_contig14866.3706.1 vs. uniprot
Match: B5LWC7_9PHYC (Putative nosD copper-binding protein n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWC7_9PHYC) HSP 1 Score: 197 bits (502), Expect = 2.030e-55 Identity = 99/218 (45.41%), Postives = 136/218 (62.39%), Query Frame = 1
Query: 31 EKGVAYKSAVDGVVVKNMKIYNCGGEGIRIRYFVTNCVVFHNRITSTGCYDFKFDEGDHGTKNGEGIYVGTSSKQW--SKNVTDEPDICRWTRIYENYIDTHGNECVDVKEGAVDTVIETNYCTGQLDEDSSGIDSRASSTTIRYNKVVGCKGAGVRLGGHKVGREQYGINCKVYCNILENNEYAGVKVMTEPNEI-CQNTVSGSDKAFRGDAAKSFE 675
E G Y+S++DGVVVK M+I +CGGE +R+R F TN ++ NRI G DF +KNGE IY+GTSS QW KN D PD ++ +++N ID+ GNECV+VKEGA D ++E N CT Q D +S+G+ SR T RYN + C GAG+R+GGH +G + YG N +VY N+ + EY+ VKV T N + C+N+ RG+ + E
Sbjct: 123 ENGGEYQSSLDGVVVKGMQIQDCGGECLRVRSFATNVEIYGNRIEGCGRDDFHLGGS---SKNGEAIYIGTSSNQWHDGKNSRDGPDYTKYVWVHDNTIDSQGNECVEVKEGASDVLVEYNVCTDQQDSNSAGMGSRTDDVTFRYNDISDCLGAGIRIGGHTIGDKTYGENNEVYGNVFHDTEYSSVKVETGKNHVFCENSCGDGSCTVRGNRVELVE 337
BLAST of mRNA_Ecto-sp13_S_contig14866.3706.1 vs. uniprot
Match: UPI00036AEC55 (right-handed parallel beta-helix repeat-containing protein n=1 Tax=Hahella ganghwensis TaxID=286420 RepID=UPI00036AEC55) HSP 1 Score: 183 bits (465), Expect = 2.990e-52 Identity = 102/223 (45.74%), Postives = 131/223 (58.74%), Query Frame = 1
Query: 34 KGVAYKSAVDGVVVKNMKIYNCGGEGIRIRYFVTNCVVFHNRITSTGCYDFKFDEGDHGTKNGEGIYVGTSSKQWS--KNVTDEPDICRWTRIYENYIDTHGNECVDVKEGAVDTVIETNYCTGQLDEDSSGIDSRASSTTIRYNKVVGCKGAGVRLGGHKVGREQYGINCKVYCNILENNEYAGVKVMTEPNE-ICQNTVSGSDKA-FRGDAAKSFEEGSEC 690
KG + G V++ M + N GGE +R+RY+VT +F N + G YDFKF+ G KNGE IYVGTSS QW KN T PD I+ N T+GNECVD+KEGA ++E N C+GQ D +S+G DSR RYN KGAGVRLGG+ V QYG+N +VY N+L NN AGVK+M P E +C N S + + G +A S++ C
Sbjct: 148 KGNEPQQGPTGFVMRAMSLKNAGGECVRLRYYVTEAEIFDNTFYNCGVYDFKFNNGG---KNGEAIYVGTSSNQWDDGKNPTGGPDPSNHNWIHHNKFLTNGNECVDIKEGAEYNLVEYNICSGQQDPNSAGFDSRGDHNIFRYNVSHDNKGAGVRLGGNTVDGRQYGVNNQVYGNLLYNNAQAGVKLMAAPQEKVCGNPTSDNTEGDIMGSSAMSYDPELSC 367
BLAST of mRNA_Ecto-sp13_S_contig14866.3706.1 vs. uniprot
Match: A0A261GHV7_9GAMM (DUF1565 domain-containing protein n=1 Tax=Hahella sp. CCB-MM4 TaxID=1926491 RepID=A0A261GHV7_9GAMM) HSP 1 Score: 182 bits (462), Expect = 1.070e-51 Identity = 92/223 (41.26%), Postives = 136/223 (60.99%), Query Frame = 1
Query: 34 KGVAYKSAVDGVVVKNMKIYNCGGEGIRIRYFVTNCVVFHNRITSTGCYDFKFDEGDHGTKNGEGIYVGTSSKQWS--KNVTDEPDICRWTRIYENYIDTHGNECVDVKEGAVDTVIETNYCTGQLDEDSSGIDSRASSTTIRYNKVVGCKGAGVRLGGHKVGREQYGINCKVYCNILENNEYAGVKVMTEPNE-ICQNTVSGSDKA-FRGDAAKSFEEGSEC 690
+G +K +G V+++M+I N GGE +R+RY VT +F N + G YDF+FD KNGE IY+GTSS+QW KN + +PD + ++ NY T GNECVD+KEGA ++E N C GQ D S G D+R IRYN KGAG+R+GG+ V QYG+ +VY N + +N+ +G+K+MT P +C N+++ + K G++A ++ + C
Sbjct: 154 QGTEHKQGPEGFVMRSMRIRNAGGECVRLRYHVTRAEIFGNTFYNCGAYDFQFDGRG---KNGEAIYIGTSSEQWDDGKNPSADPDHSNYNWVHHNYFLTRGNECVDIKEGAAHNLVENNICAGQQDPASGGFDARGDYNIIRYNVSYSNKGAGIRVGGNMVNGRQYGVFNEVYGNKIFDNDNSGIKIMTYPQRYVCGNSMTDNSKGNITGESATFYDPATGC 373
BLAST of mRNA_Ecto-sp13_S_contig14866.3706.1 vs. uniprot
Match: A0A6H5JYT7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYT7_9PHAE) HSP 1 Score: 187 bits (474), Expect = 1.590e-50 Identity = 104/212 (49.06%), Postives = 134/212 (63.21%), Query Frame = 1
Query: 4 NRQPRDHTNEKGVAYKSAVDGVVVKNMKIYNCGGEGIRIRYFVTNCVVFHNRITSTGCYDFKFDEGDHGTKNGEGIYVGTSSKQWSK--NVTDEPDICRWTRIYENYIDTHGNECVDVKEGAVDTVIETNYCTGQLDEDSSGIDSRASSTTIRYNKVVGCKGAGVRLGGHKVGREQYGINCKVYCNILENNEYAGVKVMTEPN-EICQNTVS 630
NR+P E+ Y SA+DG+V++NM + N GGE IR+R VT V+ N IT G +DF+ ++GD KNGEG+YVGTSS QW N D PD C I +NYI T GNE +DVKEG+VDT+IE N Q D+DS GI SR + IRYN + GAGVRLGGH V +YG N +VY N + + ++ VKVM +P +IC N V+
Sbjct: 145 NREPT----ERDGGYVSAIDGLVIRNMAVTNAGGECIRLRDHVTYAEVYSNHITDCGIFDFR-EDGDG--KNGEGVYVGTSSSQWDNDNNWDDVPDACMGNIIRDNYIRTRGNEGIDVKEGSVDTLIEYNEVYMQYDDDSGGIGSRGDRSIIRYNHIEDTDGAGVRLGGHTVDSTEYGKNNQVYGNTMVDCRHSAVKVMVDPQGQICDNDVT 349 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14866.3706.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig14866.3706.1 >prot_Ecto-sp13_S_contig14866.3706.1 ID=prot_Ecto-sp13_S_contig14866.3706.1|Name=mRNA_Ecto-sp13_S_contig14866.3706.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=226bp MKIYNCGGEGIRIRYFVTNCVVFHNRITSTGCYDFKFDEGDHGTKNGEGIback to top mRNA from alignment at Ecto-sp13_S_contig14866:2077..4231- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig14866.3706.1 ID=mRNA_Ecto-sp13_S_contig14866.3706.1|Name=mRNA_Ecto-sp13_S_contig14866.3706.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2155bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14866:2077..4231- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig14866:2077..4231- >mRNA_Ecto-sp13_S_contig14866.3706.1 ID=mRNA_Ecto-sp13_S_contig14866.3706.1|Name=mRNA_Ecto-sp13_S_contig14866.3706.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=678bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14866:2077..4231- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |