mRNA_Ecto-sp13_S_contig14866.3706.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig14866.3706.1
Unique NamemRNA_Ecto-sp13_S_contig14866.3706.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig14866.3706.1 vs. uniprot
Match: A0A6H5JK02_9PHAE (Beta_helix domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK02_9PHAE)

HSP 1 Score: 525 bits (1353), Expect = 1.770e-181
Identity = 243/252 (96.43%), Postives = 250/252 (99.21%), Query Frame = 1
Query:    1 GNRQPRDHTNEKGVAYKSAVDGVVVKNMKIYNCGGEGIRIRYFVTNCVVFHNRITSTGCYDFKFDEGDHGTKNGEGIYVGTSSKQWSKNVTDEPDICRWTRIYENYIDTHGNECVDVKEGAVDTVIETNYCTGQLDEDSSGIDSRASSTTIRYNKVVGCKGAGVRLGGHKVGREQYGINCKVYCNILENNEYAGVKVMTEPNEICQNTVSGSDKAFRGDAAKSFEEGSECPFDVKPPQQDIETTRWFQNCKP 756
            GNRQPRDHTNEKGVAYKSAVDGVV+KNMKIYNCGGEGIRIRYFVTNCV+FHNRITSTGCYDFKFD G+HG KNGEGIYVGTSSKQW+KNVTDEPD+CRWTRIYENYIDTHGNECVDVKEGAVDTVIETNYCTGQLDEDS+GIDSRASSTTIRYNKVVGCKGAGVRLGGHKVGREQYGINCKVYCNILENNEYAGVKVMTEPNEICQNT+SGSDKAFRGDAAKSFEEGSECPFDVKPPQQDIETTRWFQNCKP
Sbjct:  470 GNRQPRDHTNEKGVAYKSAVDGVVIKNMKIYNCGGEGIRIRYFVTNCVLFHNRITSTGCYDFKFDGGEHGVKNGEGIYVGTSSKQWNKNVTDEPDVCRWTRIYENYIDTHGNECVDVKEGAVDTVIETNYCTGQLDEDSAGIDSRASSTTIRYNKVVGCKGAGVRLGGHKVGREQYGINCKVYCNILENNEYAGVKVMTEPNEICQNTISGSDKAFRGDAAKSFEEGSECPFDVKPPQQDIETTRWFQNCKP 721          
BLAST of mRNA_Ecto-sp13_S_contig14866.3706.1 vs. uniprot
Match: D7G073_ECTSI (Putative nosD copper-binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G073_ECTSI)

HSP 1 Score: 439 bits (1130), Expect = 2.340e-151
Identity = 204/210 (97.14%), Postives = 209/210 (99.52%), Query Frame = 1
Query:    1 GNRQPRDHTNEKGVAYKSAVDGVVVKNMKIYNCGGEGIRIRYFVTNCVVFHNRITSTGCYDFKFDEGDHGTKNGEGIYVGTSSKQWSKNVTDEPDICRWTRIYENYIDTHGNECVDVKEGAVDTVIETNYCTGQLDEDSSGIDSRASSTTIRYNKVVGCKGAGVRLGGHKVGREQYGINCKVYCNILENNEYAGVKVMTEPNEICQNTVS 630
            GNRQPRDHTNEKGVAYKSAVDGVVVKNMKIYNCGGEGIRIRYFVTNCV+FHNRITSTGCYDFKFDEGDHG KNGEGIYVGTSSKQWSKNVTDEPDICRWTRIYENYIDTHGNECVDVKEGAVDTVIETNYCTGQLDE+S+GIDSRASSTTIRYNKVVGCKGAGVRLGGHKVGREQYG+NCKVYCNILENNEYAGVKVMTEPNEICQNT+S
Sbjct:  157 GNRQPRDHTNEKGVAYKSAVDGVVVKNMKIYNCGGEGIRIRYFVTNCVLFHNRITSTGCYDFKFDEGDHGVKNGEGIYVGTSSKQWSKNVTDEPDICRWTRIYENYIDTHGNECVDVKEGAVDTVIETNYCTGQLDEESAGIDSRASSTTIRYNKVVGCKGAGVRLGGHKVGREQYGVNCKVYCNILENNEYAGVKVMTEPNEICQNTIS 366          
BLAST of mRNA_Ecto-sp13_S_contig14866.3706.1 vs. uniprot
Match: D7G3L7_ECTSI (FirrV-1-B30 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3L7_ECTSI)

HSP 1 Score: 209 bits (533), Expect = 2.770e-62
Identity = 106/221 (47.96%), Postives = 146/221 (66.06%), Query Frame = 1
Query:   37 GVAYKSAVDGVVVKNMKIYNCGGEGIRIRYFVTNCVVFHNRITSTGCYDFKFDEGDHGTKNGEGIYVGTSSKQWS--KNVTDEPDICRWTRIYENYIDTHGNECVDVKEGAVDTVIETNYCTGQLDEDSSGIDSRASSTTIRYNKVVGCKGAGVRLGGHKVGREQYGINCKVYCNILENNEYAGVKVMTEPN-EICQNTVSGSDKAFRGD--AAKSFEEGS 684
            G  ++S+++G+V+ NM I NCGGE +R+RYFVT   V++NRIT+ G +DF  D G   +KNGEGIY+GTSS QW   KN +DEPD   +   ++N+ DT GNE +D+KEG+   ++E NYCTGQ D +S+ +D+R  S   R+N      GAG+R+GGHK+   QYG N +VY N+LENN+YAG+K+   P   +C N + GS    RG   A K   EGS
Sbjct:  146 GHKFRSSINGLVLSNMDINNCGGECVRMRYFVTYSQVYNNRITNCGTHDFVMDGG---SKNGEGIYLGTSSNQWDDGKNPSDEPDESSYNHFFKNHFDTQGNEGIDIKEGSRYNIVEDNYCTGQKDPNSACLDARGDSNIFRFNTCEDNLGAGIRIGGHKIDGHQYGQNNEVYENLLENNDYAGIKITMSPQGAVCSNDILGSKYDSRGSSYAEKLSPEGS 363          
BLAST of mRNA_Ecto-sp13_S_contig14866.3706.1 vs. uniprot
Match: A0A6H5JFC7_9PHAE (PPIase cyclophilin-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFC7_9PHAE)

HSP 1 Score: 203 bits (517), Expect = 1.320e-56
Identity = 100/212 (47.17%), Postives = 140/212 (66.04%), Query Frame = 1
Query:   28 NEKGVAYKSAVDGVVVKNMKIYNCGGEGIRIRYFVTNCVVFHNRITSTGCYDFKFDEGDHGTKNGEGIYVGTSSKQWS--KNVTDEPDICRWTRIYENYIDTHGNECVDVKEGAVDTVIETNYCTGQLDEDSSGIDSRASSTTIRYNKVVGCKGAGVRLGGHKVGREQYGINCKVYCNILENNEYAGVKVMTEPN-EICQNTVSGSDKAFRG 654
            N  G  ++S+++G+V+ NM I NCGGE +R+RYFVT   V++NRIT+ G +D+  +     +KNGEGIY+GTSS QW   KN +DEPD   +   ++N+ DT GNE +D+KEGA   ++E NYCTGQ D +S+ +D+R  S   R+N      GAG+R+GGHK+   QYG N +VY N+LENN YAG+K+   P   +C N + GS    RG
Sbjct:  447 NFNGHKFRSSINGLVLSNMDINNCGGECVRMRYFVTYSQVYNNRITNCGTHDYVMNGS---SKNGEGIYLGTSSNQWDDGKNPSDEPDESSYNHFFKNHFDTQGNEGIDIKEGARYNIVEDNYCTGQKDPNSACLDARGDSNIFRFNTCEDNLGAGIRIGGHKIDGHQYGQNNEVYENLLENNGYAGIKITMSPQGAVCSNDILGSKYDSRG 655          
BLAST of mRNA_Ecto-sp13_S_contig14866.3706.1 vs. uniprot
Match: A0A6H5L3G3_9PHAE (Beta_helix domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3G3_9PHAE)

HSP 1 Score: 194 bits (492), Expect = 1.440e-55
Identity = 108/212 (50.94%), Postives = 136/212 (64.15%), Query Frame = 1
Query:    4 NRQPRDHTNEKGVAYKSAVDGVVVKNMKIYNCGGEGIRIRYFVTNCVVFHNRITSTGCYDFKFDEGDHGTKNGEGIYVGTSSKQWS--KNVTDEPDICRWTRIYENYIDTHGNECVDVKEGAVDTVIETNYCTGQLDEDSSGIDSRASSTTIRYNKVVGCKGAGVRLGGHKVGREQYGINCKVYCNILENNEYAGVKVMTEPN-EICQNTVS 630
            NR+P     E+   Y SA+DG+V++NM + N GGE IR+R  VTN  V+ N IT  G YDF+ ++GD   KNGEG+YVGTSSKQW   KN  D PD+C    I  NYI T GNE +DVKEG VDT+IE N    Q D+DS GI SR   + IRYN +    GAGVRLGGH V   +YG N +VY N + +  ++ VKVM +P  +IC N V+
Sbjct:  140 NREPT----ERAGGYISAIDGLVIRNMAVTNAGGECIRLRDHVTNAEVYSNHITDCGIYDFR-EDGDG--KNGEGVYVGTSSKQWDSDKNWDDVPDVCMGNIIRGNYIRTRGNEGIDVKEGTVDTLIEYNEVYMQYDDDSGGIGSRGDRSIIRYNHIEDTDGAGVRLGGHTVDGIEYGKNNQVYGNTMVDCRHSAVKVMVDPQGQICNNDVT 344          
BLAST of mRNA_Ecto-sp13_S_contig14866.3706.1 vs. uniprot
Match: Q6XM06_9PHYC (FirrV-1-B30 n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XM06_9PHYC)

HSP 1 Score: 198 bits (504), Expect = 2.000e-55
Identity = 98/214 (45.79%), Postives = 138/214 (64.49%), Query Frame = 1
Query:   37 GVAYKSAVDGVVVKNMKIYNCGGEGIRIRYFVTNCVVFHNRITSTGCYDFKFDEGDHGTKNGEGIYVGTSSKQWS--KNVTDEPDICRWTRIYENYIDTHGNECVDVKEGAVDTVIETNYCTGQLDEDSSGIDSRASSTTIRYNKVVGCKGAGVRLGGHKVGREQYGINCKVYCNILENNEYAGVKVMTEPNEI-CQNTVSGSDKAFRGDAAKS 669
            G+ Y+S++ GV++++M++ +CGGE IR+R FVT+  V  NRI   G +D+ FD      KNGE IYVGTSS QW+  KN    PD  ++  I++N IDT  NECVDVKEG+ D ++E N C+ QLD +S+G DSR    T RYN+V  C GAG+R+GGHK+  + YG N + Y N++ NN Y+ +KV T    + CQN         +G+ A+S
Sbjct:  152 GIEYESSITGVIIEDMEVEDCGGECIRLRSFVTHAEVTGNRIERCGRHDYLFDGAG---KNGEAIYVGTSSNQWNDGKNSKSGPDKTKYIWIHDNVIDTQANECVDVKEGSTDVLVEYNACSNQLDTNSAGFDSRTDDVTFRYNEVSNCAGAGIRIGGHKIDGKTYGENNEAYGNVMRNNAYSAIKVETGKQHVFCQNDCGKEGCTVKGNRAES 362          
BLAST of mRNA_Ecto-sp13_S_contig14866.3706.1 vs. uniprot
Match: B5LWC7_9PHYC (Putative nosD copper-binding protein n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWC7_9PHYC)

HSP 1 Score: 197 bits (502), Expect = 2.030e-55
Identity = 99/218 (45.41%), Postives = 136/218 (62.39%), Query Frame = 1
Query:   31 EKGVAYKSAVDGVVVKNMKIYNCGGEGIRIRYFVTNCVVFHNRITSTGCYDFKFDEGDHGTKNGEGIYVGTSSKQW--SKNVTDEPDICRWTRIYENYIDTHGNECVDVKEGAVDTVIETNYCTGQLDEDSSGIDSRASSTTIRYNKVVGCKGAGVRLGGHKVGREQYGINCKVYCNILENNEYAGVKVMTEPNEI-CQNTVSGSDKAFRGDAAKSFE 675
            E G  Y+S++DGVVVK M+I +CGGE +R+R F TN  ++ NRI   G  DF        +KNGE IY+GTSS QW   KN  D PD  ++  +++N ID+ GNECV+VKEGA D ++E N CT Q D +S+G+ SR    T RYN +  C GAG+R+GGH +G + YG N +VY N+  + EY+ VKV T  N + C+N+        RG+  +  E
Sbjct:  123 ENGGEYQSSLDGVVVKGMQIQDCGGECLRVRSFATNVEIYGNRIEGCGRDDFHLGGS---SKNGEAIYIGTSSNQWHDGKNSRDGPDYTKYVWVHDNTIDSQGNECVEVKEGASDVLVEYNVCTDQQDSNSAGMGSRTDDVTFRYNDISDCLGAGIRIGGHTIGDKTYGENNEVYGNVFHDTEYSSVKVETGKNHVFCENSCGDGSCTVRGNRVELVE 337          
BLAST of mRNA_Ecto-sp13_S_contig14866.3706.1 vs. uniprot
Match: UPI00036AEC55 (right-handed parallel beta-helix repeat-containing protein n=1 Tax=Hahella ganghwensis TaxID=286420 RepID=UPI00036AEC55)

HSP 1 Score: 183 bits (465), Expect = 2.990e-52
Identity = 102/223 (45.74%), Postives = 131/223 (58.74%), Query Frame = 1
Query:   34 KGVAYKSAVDGVVVKNMKIYNCGGEGIRIRYFVTNCVVFHNRITSTGCYDFKFDEGDHGTKNGEGIYVGTSSKQWS--KNVTDEPDICRWTRIYENYIDTHGNECVDVKEGAVDTVIETNYCTGQLDEDSSGIDSRASSTTIRYNKVVGCKGAGVRLGGHKVGREQYGINCKVYCNILENNEYAGVKVMTEPNE-ICQNTVSGSDKA-FRGDAAKSFEEGSEC 690
            KG   +    G V++ M + N GGE +R+RY+VT   +F N   + G YDFKF+ G    KNGE IYVGTSS QW   KN T  PD      I+ N   T+GNECVD+KEGA   ++E N C+GQ D +S+G DSR      RYN     KGAGVRLGG+ V   QYG+N +VY N+L NN  AGVK+M  P E +C N  S + +    G +A S++    C
Sbjct:  148 KGNEPQQGPTGFVMRAMSLKNAGGECVRLRYYVTEAEIFDNTFYNCGVYDFKFNNGG---KNGEAIYVGTSSNQWDDGKNPTGGPDPSNHNWIHHNKFLTNGNECVDIKEGAEYNLVEYNICSGQQDPNSAGFDSRGDHNIFRYNVSHDNKGAGVRLGGNTVDGRQYGVNNQVYGNLLYNNAQAGVKLMAAPQEKVCGNPTSDNTEGDIMGSSAMSYDPELSC 367          
BLAST of mRNA_Ecto-sp13_S_contig14866.3706.1 vs. uniprot
Match: A0A261GHV7_9GAMM (DUF1565 domain-containing protein n=1 Tax=Hahella sp. CCB-MM4 TaxID=1926491 RepID=A0A261GHV7_9GAMM)

HSP 1 Score: 182 bits (462), Expect = 1.070e-51
Identity = 92/223 (41.26%), Postives = 136/223 (60.99%), Query Frame = 1
Query:   34 KGVAYKSAVDGVVVKNMKIYNCGGEGIRIRYFVTNCVVFHNRITSTGCYDFKFDEGDHGTKNGEGIYVGTSSKQWS--KNVTDEPDICRWTRIYENYIDTHGNECVDVKEGAVDTVIETNYCTGQLDEDSSGIDSRASSTTIRYNKVVGCKGAGVRLGGHKVGREQYGINCKVYCNILENNEYAGVKVMTEPNE-ICQNTVSGSDKA-FRGDAAKSFEEGSEC 690
            +G  +K   +G V+++M+I N GGE +R+RY VT   +F N   + G YDF+FD      KNGE IY+GTSS+QW   KN + +PD   +  ++ NY  T GNECVD+KEGA   ++E N C GQ D  S G D+R     IRYN     KGAG+R+GG+ V   QYG+  +VY N + +N+ +G+K+MT P   +C N+++ + K    G++A  ++  + C
Sbjct:  154 QGTEHKQGPEGFVMRSMRIRNAGGECVRLRYHVTRAEIFGNTFYNCGAYDFQFDGRG---KNGEAIYIGTSSEQWDDGKNPSADPDHSNYNWVHHNYFLTRGNECVDIKEGAAHNLVENNICAGQQDPASGGFDARGDYNIIRYNVSYSNKGAGIRVGGNMVNGRQYGVFNEVYGNKIFDNDNSGIKIMTYPQRYVCGNSMTDNSKGNITGESATFYDPATGC 373          
BLAST of mRNA_Ecto-sp13_S_contig14866.3706.1 vs. uniprot
Match: A0A6H5JYT7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYT7_9PHAE)

HSP 1 Score: 187 bits (474), Expect = 1.590e-50
Identity = 104/212 (49.06%), Postives = 134/212 (63.21%), Query Frame = 1
Query:    4 NRQPRDHTNEKGVAYKSAVDGVVVKNMKIYNCGGEGIRIRYFVTNCVVFHNRITSTGCYDFKFDEGDHGTKNGEGIYVGTSSKQWSK--NVTDEPDICRWTRIYENYIDTHGNECVDVKEGAVDTVIETNYCTGQLDEDSSGIDSRASSTTIRYNKVVGCKGAGVRLGGHKVGREQYGINCKVYCNILENNEYAGVKVMTEPN-EICQNTVS 630
            NR+P     E+   Y SA+DG+V++NM + N GGE IR+R  VT   V+ N IT  G +DF+ ++GD   KNGEG+YVGTSS QW    N  D PD C    I +NYI T GNE +DVKEG+VDT+IE N    Q D+DS GI SR   + IRYN +    GAGVRLGGH V   +YG N +VY N + +  ++ VKVM +P  +IC N V+
Sbjct:  145 NREPT----ERDGGYVSAIDGLVIRNMAVTNAGGECIRLRDHVTYAEVYSNHITDCGIFDFR-EDGDG--KNGEGVYVGTSSSQWDNDNNWDDVPDACMGNIIRDNYIRTRGNEGIDVKEGSVDTLIEYNEVYMQYDDDSGGIGSRGDRSIIRYNHIEDTDGAGVRLGGHTVDSTEYGKNNQVYGNTMVDCRHSAVKVMVDPQGQICDNDVT 349          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14866.3706.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JK02_9PHAE1.770e-18196.43Beta_helix domain-containing protein n=1 Tax=Ectoc... [more]
D7G073_ECTSI2.340e-15197.14Putative nosD copper-binding protein n=1 Tax=Ectoc... [more]
D7G3L7_ECTSI2.770e-6247.96FirrV-1-B30 n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
A0A6H5JFC7_9PHAE1.320e-5647.17PPIase cyclophilin-type domain-containing protein ... [more]
A0A6H5L3G3_9PHAE1.440e-5550.94Beta_helix domain-containing protein n=1 Tax=Ectoc... [more]
Q6XM06_9PHYC2.000e-5545.79FirrV-1-B30 n=1 Tax=Feldmannia irregularis virus a... [more]
B5LWC7_9PHYC2.030e-5545.41Putative nosD copper-binding protein n=1 Tax=Feldm... [more]
UPI00036AEC552.990e-5245.74right-handed parallel beta-helix repeat-containing... [more]
A0A261GHV7_9GAMM1.070e-5141.26DUF1565 domain-containing protein n=1 Tax=Hahella ... [more]
A0A6H5JYT7_9PHAE1.590e-5049.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14866contigEcto-sp13_S_contig14866:2077..4231 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeBacteria
Stop1
Start1
Seed ortholog score180.3
Seed ortholog evalue1e-42
Seed eggNOG ortholog1121935.AQXX01000136_gene4114
Model size827
Hectar predicted targeting categoryother localisation
Exons4
EggNOG free text desc.Parallel beta-helix repeats
EggNOG OGs1NHJ7@1224,1SHNB@1236,COG3420@1,COG3420@2
Ec32 ortholog descriptionputative nosD copper-binding protein
Ec32 orthologEc-05_004070.1
Cds size678
COG Functional cat.P
Best tax levelGammaproteobacteria
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14866.3706.1prot_Ecto-sp13_S_contig14866.3706.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig14866 2145..4150 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462793.0493507-UTR-Ecto-sp13_S_contig14866:2076..21441681462793.0493507-UTR-Ecto-sp13_S_contig14866:2076..2144Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig14866 2077..2144 -
1681462793.0961106-UTR-Ecto-sp13_S_contig14866:4150..42311681462793.0961106-UTR-Ecto-sp13_S_contig14866:4150..4231Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig14866 4151..4231 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462793.0589254-CDS-Ecto-sp13_S_contig14866:2144..23601681462793.0589254-CDS-Ecto-sp13_S_contig14866:2144..2360Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14866 2145..2360 -
1681462793.0671215-CDS-Ecto-sp13_S_contig14866:2709..29221681462793.0671215-CDS-Ecto-sp13_S_contig14866:2709..2922Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14866 2710..2922 -
1681462793.0760686-CDS-Ecto-sp13_S_contig14866:3239..33371681462793.0760686-CDS-Ecto-sp13_S_contig14866:3239..3337Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14866 3240..3337 -
1681462793.0860841-CDS-Ecto-sp13_S_contig14866:3999..41501681462793.0860841-CDS-Ecto-sp13_S_contig14866:3999..4150Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14866 4000..4150 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig14866.3706.1

>prot_Ecto-sp13_S_contig14866.3706.1 ID=prot_Ecto-sp13_S_contig14866.3706.1|Name=mRNA_Ecto-sp13_S_contig14866.3706.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=226bp
MKIYNCGGEGIRIRYFVTNCVVFHNRITSTGCYDFKFDEGDHGTKNGEGI
YVGTSSKQWSKNVTDEPDICRWTRIYENYIDTHGNECVDVKEGAVDTVIE
TNYCTGQLDEDSSGIDSRASSTTIRYNKVVGCKGAGVRLGGHKVGREQYG
INCKVYCNILENNEYAGVKVMTEPNEICQNTVSGSDKAFRGDAAKSFEEG
SECPFDVKPPQQDIETTRWFQNCKP*
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mRNA from alignment at Ecto-sp13_S_contig14866:2077..4231-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig14866.3706.1 ID=mRNA_Ecto-sp13_S_contig14866.3706.1|Name=mRNA_Ecto-sp13_S_contig14866.3706.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2155bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14866:2077..4231- (Ectocarpus species13 EcNAP12_S_4_19m)
GGCAACCGCCAACCCCGTGACCACACCAACGAGAAGGGCGTCGCGTACAA GTCCGCGGTCGACGGCGTTGTCGTGAAGAACATGAAGATCTACAACTGCG GCGGCGAGGGCATCCGCATCCGGTACTTCGTCACCAACTGCGTCGTGTTC CACAACCGCATCACTTCCACCGGCTGCTACGACTTCAAGTTCGACGAGGG CGACCACGGCACCAAGAACGGAGAGGGCATATGTGAGTTGTGTGCTCCGA ACGTTTTTTTCTTGCTCTGTTTTTTTTTTTTTTGTCATTTGGCGCGTTTT TCCGCATCTAATTCTTGCGTGCATGAGACTGCTGTTGTCATCCTGCCGCT GACGCCAGTATGAGACTGTTGTCTCCAGGTTCGCGCGTGAGCAAGTTCTA TTAGGGATGTGTGGTGCGGATACACACCGGTTCAGCCTCTGGTGGAGAGG CTGGTGTACGGATAGTCGTGTTGAGTGAGATTGTGTGTCAGGGGGGAGCA ACCTTGTGTTAAAGCAAGGTTCAGCGTCCGACCTGCACTGGCTCTTTATG TGGTAACACCCAGAAGGTAGATCTCCGACAGGTCATCTGAGGTCACAATC TACGACCGTCTGAGGTGGCATTCACACGTGTTGTGGTACTTTCAGCAGTG CATGATGGGCCGCGCTATTTTTTGGGTGAGGCATCCCTCCCTCCCATGTT GTGTTTCTTGTCCTTTGGGGCTTACTCAAATCTGCGACGAAAAGAACAAT CTATGGTCAAGTAAACCTCCTCCCTCTTTGTGTTGCCGCGCCTGCGCATC TGACCCGACCCTTGCCTTCCTCCTCTTGTCCGGCAATGGTATCATATCAT TCCATGCCACTCCCGTTCCGTCGTTGTCCTATGGCTTGGTTCAGACGTTG GCACCTCGAGCAAGCAGTGGAGCAAGAACGTGACCGACGAGCCGGACATC TGCCGCTGGACCCGCATCTACGAGAACTACATCGACACACACGTGAGTAA AGTAGTTCCCATTATCTTGTCTTGTCGTCTTCGCACAGCCTCTGGGAGAT TTGCCACAGGGTTTTATCTTGTTTTTTCGCTCATGTTCGAATGTTCAAGA TCTTTGTAGATGCTCGTAGCTTTTCGGTGATGTCCCTCACGTAAATCTTG CACTCATTGCATTTGGGAGACGATCGGTCGATTGAACGCGCGTTCACGTT AGGGGGTCTTCCGCCGTATCATGAAGTGTAGAAAGAGTGCGCGCGCAATG AAAAACACTCGAAACCTCATCTATTTTACTTTTTTGTCGATCCAAAATAA AAAAAACAGGGTAACGAGTGCGTGGACGTGAAAGAGGGCGCGGTGGACAC CGTCATCGAGACCAACTACTGCACCGGACAGCTGGACGAGGACTCTTCCG GCATCGACTCGCGTGCGAGCTCCACGACCATCCGCTACAACAAGGTGGTG GGCTGCAAGGGCGCCGGCGTGCGCCTCGGCGGGCACAAGGTCGGCCGCGA GCAGTACGGCATCAACTGCAAGGTGCGTGCGCGCGGCGTTTGTTTTTCCC GTGCCTTTTGGTTTGTGTGTCCCGTGTAAACGGCTCTTTTCTGCTGAACC TTGACGACACGTCAACATGGTGTTGGTACAACTGCTGTACCCGAAAAATG AAGTGGCACATGTGAGATAGAAATGTGAGATGGGAGGAAAAGAATATGTA CGGCAGTGAGCGACCGGCCCAACCAGATACGCGTCAGGCGGTCCACGTAG CCGATTGCTTATTTTGATCGCCCATGACGCGACTCCCGTCCACGCTTCCG TTGTGATGGAAAGCCACGCGTCCCCCAACCCCTTCGCCCCTCCCCCCCTC ACGCCACACCCGCTTCTCTAGGTGTACTGCAACATCCTCGAGAACAACGA GTACGCCGGGGTGAAGGTCATGACCGAGCCTAACGAGATCTGCCAGAACA CCGTCAGCGGCAGCGACAAGGCCTTCCGCGGAGACGCCGCCAAGAGCTTC GAGGAGGGCAGCGAGTGCCCCTTCGACGTGAAGCCCCCCCAGCAGGACAT CGAGACCACCCGGTGGTTCCAGAACTGCAAGCCCTAAGTAAGCGCCGCCG CGTGGCGAAGCGAAGTCTTGACGATGAGCGAAAGAGGGAGGCCTGCCCAT CCGTT
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig14866:2077..4231-

>mRNA_Ecto-sp13_S_contig14866.3706.1 ID=mRNA_Ecto-sp13_S_contig14866.3706.1|Name=mRNA_Ecto-sp13_S_contig14866.3706.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=678bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14866:2077..4231- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGAAGATCTACAACTGCGGCGGCGAGGGCATCCGCATCCGGTACTTCGT
CACCAACTGCGTCGTGTTCCACAACCGCATCACTTCCACCGGCTGCTACG
ACTTCAAGTTCGACGAGGGCGACCACGGCACCAAGAACGGAGAGGGCATA
TACGTTGGCACCTCGAGCAAGCAGTGGAGCAAGAACGTGACCGACGAGCC
GGACATCTGCCGCTGGACCCGCATCTACGAGAACTACATCGACACACACG
GTAACGAGTGCGTGGACGTGAAAGAGGGCGCGGTGGACACCGTCATCGAG
ACCAACTACTGCACCGGACAGCTGGACGAGGACTCTTCCGGCATCGACTC
GCGTGCGAGCTCCACGACCATCCGCTACAACAAGGTGGTGGGCTGCAAGG
GCGCCGGCGTGCGCCTCGGCGGGCACAAGGTCGGCCGCGAGCAGTACGGC
ATCAACTGCAAGGTGTACTGCAACATCCTCGAGAACAACGAGTACGCCGG
GGTGAAGGTCATGACCGAGCCTAACGAGATCTGCCAGAACACCGTCAGCG
GCAGCGACAAGGCCTTCCGCGGAGACGCCGCCAAGAGCTTCGAGGAGGGC
AGCGAGTGCCCCTTCGACGTGAAGCCCCCCCAGCAGGACATCGAGACCAC
CCGGTGGTTCCAGAACTGCAAGCCCTAA
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