mRNA_Ecto-sp13_S_contig14863.3705.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig14863.3705.1 vs. uniprot
Match: D8LEU7_ECTSI (Cysteine desulfurase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEU7_ECTSI) HSP 1 Score: 316 bits (810), Expect = 3.610e-104 Identity = 163/171 (95.32%), Postives = 167/171 (97.66%), Query Frame = 1
Query: 1 IMHSNNEVGCLQPITEIAEACRQRRIMCHTDAAQSIGKVPVKVENLGVDMLTLVGHKFGAPKGVAALFVRRGLALPPMIHGGGQEAGRRAGTENVLLISGMGKAAEIVDVGLERLSKHLAAMRERLLELLMAANLGDGVKVHGPRNPSLRLPNTLSIGLPGVEARVLLERL 513
IMHSNNEVG LQPITEIAEACRQR IMCHTDAAQSIGKVPVKV +LGVDMLTLVGHKFGAPKGVAALFVRRGLALPPMIHGGGQEAGRRAGTENVLLISGMGKAAEIVDV LERLSKHLAAMRERLLELLMAA+LGDGVKVHGPR+PSLRLPNTLSIGLPGVEARVLLER+
Sbjct: 253 IMHSNNEVGSLQPITEIAEACRQRGIMCHTDAAQSIGKVPVKVADLGVDMLTLVGHKFGAPKGVAALFVRRGLALPPMIHGGGQEAGRRAGTENVLLISGMGKAAEIVDVELERLSKHLAAMRERLLELLMAADLGDGVKVHGPRSPSLRLPNTLSIGLPGVEARVLLERV 423
BLAST of mRNA_Ecto-sp13_S_contig14863.3705.1 vs. uniprot
Match: A0A2P6TKZ5_CHLSO (Cysteine desulfurase n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TKZ5_CHLSO) HSP 1 Score: 262 bits (670), Expect = 3.920e-83 Identity = 131/224 (58.48%), Postives = 174/224 (77.68%), Query Frame = 1
Query: 1 IMHSNNEVGCLQPITEIAEACRQRRIMCHTDAAQSIGKVPVKVENLGVDMLTLVGHKFGAPKGVAALFVRRGLALPPMIHGGGQEAGRRAGTENVLLISGMGKAAEIVDVGLERLSKHLAAMRERLLELLMAANLGDGVKVHGPRNPSLRLPNTLSIGLPGVEARVLLERLSETVAASAGSACHAGEATMSGVLQAMGVDEPTGFGTLRLSVGRHTTRKEVDQA 672
+MHSNNEVG LQP+ ++A A RQR ++ H DAAQSIGKVPV V+ LGVDMLT+VGHKFGAPKGVAAL++RRG+A+ ++ GGGQE GRRAGTENVLL++G+GKAA++V L + H+ A+R+ L L+A +++GP + + RLPNTLSIG+ G++A LL LSE +AASAG+ACH+G ++S VL+AMGV GTLRLSVGRH+T+++VD+A
Sbjct: 181 LMHSNNEVGSLQPVADVAAAARQRGVLVHCDAAQSIGKVPVDVQQLGVDMLTIVGHKFGAPKGVAALYIRRGVAIERLLCGGGQEGGRRAGTENVLLLAGLGKAADLVSQELPATAAHMRALRDSLQSQLLAGLPAGAARINGPSDDAQRLPNTLSIGIKGIQASALLAELSEQLAASAGAACHSGGQSVSAVLRAMGVPHEHALGTLRLSVGRHSTQRDVDRA 404
BLAST of mRNA_Ecto-sp13_S_contig14863.3705.1 vs. uniprot
Match: A0A7S4C1G4_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4C1G4_CHRCT) HSP 1 Score: 250 bits (639), Expect = 5.750e-80 Identity = 136/227 (59.91%), Postives = 166/227 (73.13%), Query Frame = 1
Query: 1 IMHSNNEVGCLQPITEIAEACRQR--RIMCHTDAAQSIGKVPVKVENLGVDMLTLVGHKFGAPKGVAALFVRRGLALPPMIHGGGQEAGRRAGTENVLLISGMGKAAEIVDVGLERLSKHLAAMRERLLELLMAANLGDGVKVHGPRNPSLRLPNTLSIGLPGVEARVLLERLSETVAASAGSACHAGEA-TMSGVLQAMGVDEPTGFGTLRLSVGRHTTRKEVDQA 672
+MHSNNEVG +QPI EI+ + ++ HTDAAQSIGKVP+ V LGVDMLTLVGHK GAPKGV AL+VR GL LPP++HGGGQEAGRRAGTE+VLL++ +G AA I L LS+H+ A R+RL + +A + +V+GP N + RLPNTLSIGL GV A LL L + +AASAG+ACH+ EA T+S VL+AM V GTLRLS GRHTT +EVDQA
Sbjct: 61 VMHSNNEVGSVQPIAEISSMVKSEMPHVLIHTDAAQSIGKVPIDVRELGVDMLTLVGHKMGAPKGVGALYVRAGLKLPPLLHGGGQEAGRRAGTESVLLLAALGAAATIARTDLVPLSRHMRATRDRLAYRITSALGPNATRVNGPHNDAQRLPNTLSIGLKGVSAAELLHTLRDQLAASAGAACHSQEAATVSAVLRAMRVPREYALGTLRLSTGRHTTMREVDQA 287
BLAST of mRNA_Ecto-sp13_S_contig14863.3705.1 vs. uniprot
Match: A0A2P6V8I3_9CHLO (Cysteine desulfurase isoform A n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6V8I3_9CHLO) HSP 1 Score: 244 bits (622), Expect = 5.710e-76 Identity = 127/226 (56.19%), Postives = 167/226 (73.89%), Query Frame = 1
Query: 1 IMHSNNEVGCLQPITEIAEACRQRRIMCHTDAAQSIGKVPVKVENLGVDMLTLVGHKFGAPKGVAALFVRRGLALPPMIHGGGQEAGRRAGTENVLLISGMGKAAEIVDVGLERLSKHLAAMRERLLELLMAANLGDGVKVHGPRNPSLRLPNTLSIGLPGVEARVLLERLSETVAASAGSACHAGEATMSGVLQAMGVDEPTGFGTLRLSVGRHTTRKEVDQAGA 678
+MHSNNEVG + P+ E+A RQR I+ H+DAAQS+GKV V V LGVD LT+VGHKFGAPKGVAALFVRRG+ L ++ GGGQE G+RAGTE+VLL++G+G AA +V L + H+AA+R+ L + L+A +++GP + + RLPNTLSIG+ G++A LL LS+ +AASAG+ACH+G ++S VL+AM V P GTLRLSVGRHT + +VD A A
Sbjct: 179 VMHSNNEVGSILPVAELAALARQRGILLHSDAAQSLGKVEVDVTRLGVDALTIVGHKFGAPKGVAALFVRRGVHLERLLCGGGQEGGQRAGTESVLLLAGLGAAAAVVAAELPATAAHMAALRDSLQQQLLAGLPPGTARINGPSDAARRLPNTLSIGIAGIQASALLAELSQQLAASAGAACHSGGGSVSAVLRAMQVPLPHALGTLRLSVGRHTAQADVDAAAA 404
BLAST of mRNA_Ecto-sp13_S_contig14863.3705.1 vs. uniprot
Match: E1ZDB8_CHLVA (Aminotran_5 domain-containing protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZDB8_CHLVA) HSP 1 Score: 242 bits (617), Expect = 3.050e-75 Identity = 129/226 (57.08%), Postives = 165/226 (73.01%), Query Frame = 1
Query: 4 MHSNNEVGCLQPITEIAEACRQRRIMCHTDAAQSIGKVPVKVENLGVDMLTLVGHKFGAPKGVAALFVRRGLALPPMIHGGGQEAGRRAGTENVLLISGMGKAAEIVDVGLERLSKHLAAMRERLLELLMAANLGDGVKVHGPRNPSLRLPNTLSIGLPGVEARVLLERLSETVAASAGSACHAGEAT-MSGVLQAMGVDEPTGFGTLRLSVGRHTTRKEVDQAGA 678
MHSNNEVG +QP+ ++A R+ + H DAAQS+GKV V V+ LGVDMLT+V HKFG PKGVAAL+VRRG+ L ++ GGGQE GRRAGTENV+L++G+GKAAE+V L + H+AAMR+ L + L+A +HGP + +LRLPNTLSIG+ G+ A LL LSE +AASAG+ACH+G +S VLQAM V GTLRLS GRHTT+++VD+A A
Sbjct: 173 MHSNNEVGSIQPVAQLAALARRAGALMHCDAAQSLGKVDVDVQQLGVDMLTVVAHKFGGPKGVAALYVRRGVRLERLLCGGGQEGGRRAGTENVVLVAGLGKAAELVSRELPATAAHMAAMRDSLQQQLLAGLPPSTALIHGPADDALRLPNTLSIGIRGIAAARLLAELSEQLAASAGAACHSGGGHGVSAVLQAMAVPTEHAVGTLRLSTGRHTTQQDVDRAAA 398
BLAST of mRNA_Ecto-sp13_S_contig14863.3705.1 vs. uniprot
Match: A4S300_OSTLU (Aminotran_5 domain-containing protein n=2 Tax=Ostreococcus sp. 'lucimarinus' TaxID=242159 RepID=A4S300_OSTLU) HSP 1 Score: 239 bits (609), Expect = 4.120e-74 Identity = 132/237 (55.70%), Postives = 168/237 (70.89%), Query Frame = 1
Query: 1 IMHSNNEVGCLQPITEIAEACRQRRIMCHTDAAQSIGKVPVKVENLGVDMLTLVGHKFGAPKGVAALFVRRGLALPPM--IHGGGQEAGRRAGTENVLLISGMGKAAEIVDVGLERLSKHLAAMRERLLELLMAA---NLGDGVKVHGPRNPSLRLPNTLSIGLPGVEARVLLERLSETVAASAGSACH------AGEATMSGVLQAMGVDEPTGFGTLRLSVGRHTTRKEVDQAGA 678
+MH+NNE G +QP+ EIA R+R ++ HTDAAQS GKVPVKV+ LGVDM T+VGHK GAPKGV AL++RRG L +GGGQE+GRRAGTENVL I G+GKA EIV+ ++ KHL AMR+ L + L+ A G GV+V+GPR+ RLPNTL+IG+ G+ A + L LSE +AASAG+ACH +G AT+S VL+AM V GTLRLSVGRHT ++V++ A
Sbjct: 154 VMHANNETGAIQPVAEIARRARERGVLTHTDAAQSAGKVPVKVDALGVDMATIVGHKIGAPKGVGALYIRRGTDLGDAKPFYGGGQESGRRAGTENVLHIVGLGKACEIVEREMDTCPKHLKAMRDDLQKRLVDALGGTDGSGVRVNGPRDDDKRLPNTLNIGIKGLLASITLMELSELLAASAGAACHTPDAATSGGATVSSVLEAMNVPMEYAVGTLRLSVGRHTVERDVERGAA 390
BLAST of mRNA_Ecto-sp13_S_contig14863.3705.1 vs. uniprot
Match: C1EHB0_MICCC (Aminotran_5 domain-containing protein (Fragment) n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1EHB0_MICCC) HSP 1 Score: 233 bits (593), Expect = 6.000e-72 Identity = 126/229 (55.02%), Postives = 163/229 (71.18%), Query Frame = 1
Query: 1 IMHSNNEVGCLQPITEIAEACRQRR--IMCHTDAAQSIGKVPVKVENLGVDMLTLVGHKFGAPKGVAALFVRRGLALPPMIHGGGQEAGRRAGTENVLLISGMGKAAEIVDVGLERLSKHLAAMRERLLELLMAANLGD---GVKVHGPRNPSLRLPNTLSIGLPGVEARVLLERLSETVAASAGSACHAGEA--TMSGVLQAMGVDEPTGFGTLRLSVGRHTTRKEVD 666
+MH+NNE G +QP+ E A R++ ++ HTDAAQS GK+PVKV +LGVDM T+VGHK GAPKGVAAL+V ++HGGGQE+GRRAGTENVL I G+G A E+V+ + L H++AMR+ L L + GD GV+V+GPR+ + RLPNTLS+G+ GV A LL+ L + VAASAG+ACH+GEA ++S VL AM V E GTLRLSVGRHT +V+
Sbjct: 157 VMHANNETGAIQPVAECARLAREKNEDVLIHTDAAQSCGKIPVKVNDLGVDMCTVVGHKIGAPKGVAALYVASAAPFSKLLHGGGQESGRRAGTENVLEIVGLGAACELVEREKDILPSHMSAMRDELSRRLASGLGGDDGSGVRVNGPRDDAKRLPNTLSVGIKGVSASQLLDVLKDDVAASAGAACHSGEAAASVSAVLSAMAVPEEYAIGTLRLSVGRHTCPADVE 385
BLAST of mRNA_Ecto-sp13_S_contig14863.3705.1 vs. uniprot
Match: A0A7S0PSY7_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0PSY7_MICPS) HSP 1 Score: 235 bits (599), Expect = 8.730e-71 Identity = 127/233 (54.51%), Postives = 165/233 (70.82%), Query Frame = 1
Query: 1 IMHSNNEVGCLQPITEIAEACRQRR--IMCHTDAAQSIGKVPVKVENLGVDMLTLVGHKFGAPKGVAALFVRRGLALPPMIHGGGQEAGRRAGTENVLLISGMGKAAEIVDVGLERLSKHLAAMRERLLELLMAA---NLGDGVKVHGPRNPSLRLPNTLSIGLPGVEARVLLERLSETVAASAGSACHAGEA--TMSGVLQAMGVDEPTGFGTLRLSVGRHTTRKEVDQAGA 678
+MH+NNE G +QP+ E A R++ ++ HTDAAQS GK+PVKV L VDM T+VGHK GAPKGVAAL+V+ G ++HGGGQE+GRRAGTENVL I G+G A E+V+ + L H++AMR+ LL L+ N G GV+V+GP + + RLPNTLS+G+ GV A LL+ L + VAASAG+ACH+GEA ++S VL+AM V E GTLRLSVGRHT +V+ A
Sbjct: 309 VMHANNETGAIQPVAECARLAREKNGDVLIHTDAAQSCGKIPVKVNELRVDMCTVVGHKIGAPKGVAALYVKSGAPFSKLVHGGGQESGRRAGTENVLEIVGLGAACELVEREKDVLPSHMSAMRDELLRRLVVGLGENDGSGVRVNGPIDDAERLPNTLSVGIRGVSASQLLDVLKDDVAASAGAACHSGEAAASVSAVLKAMAVPEEYAIGTLRLSVGRHTCPADVENGAA 541
BLAST of mRNA_Ecto-sp13_S_contig14863.3705.1 vs. uniprot
Match: R1CHP5_EMIHU (Cysteine desulfurase NFS1 n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1CHP5_EMIHU) HSP 1 Score: 229 bits (584), Expect = 2.620e-70 Identity = 127/223 (56.95%), Postives = 156/223 (69.96%), Query Frame = 1
Query: 1 IMHSNNEVGCLQPITEIAEACRQRR--IMCHTDAAQSIGKVPVKVENLGVDMLTLVGHKFGAPKGVAALFVRRGLALPPMIHGGGQEAGRRAGTENVLLISGMGKAAEIVDVGLERLSKHLAAMRERLLELLMAANLGDGVKVHGPRNPSLRLPNTLSIGLPGVEARVLLERLSETVAASAGSACHAGEATMSGVLQAMGVDEPTGFGTLRLSVGRHTTRKEV 663
+MHSNNEVG +QP+ +IA+A R R ++ HTDAAQSIGKV V LGVD+LTLVGHKFGAPKG+AAL++R GLALP MIHGGGQE+GRRAGTE ++ +G AA I L +H+ R+ L L+ +V+GP + S RLPNTLSIGL V A LLE LSE +AASAG+ACHA A++S VL+A+ V GTLRLS GRHTT +EV
Sbjct: 156 VMHSNNEVGSVQPVRQIADAVRALRPSVLVHTDAAQSIGKVDVDTRALGVDLLTLVGHKFGAPKGIAALYIRSGLALPRMIHGGGQESGRRAGTECTPMVVALGTAAAIARAEAAPLREHMRRTRDALESALVERLPAGSTRVNGPADASRRLPNTLSIGLRDVRAAELLETLSERLAASAGAACHANAASVSAVLRALRVPPEFAVGTLRLSTGRHTTLEEV 378
BLAST of mRNA_Ecto-sp13_S_contig14863.3705.1 vs. uniprot
Match: D8U8R1_VOLCA (Uncharacterized protein n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8U8R1_VOLCA) HSP 1 Score: 227 bits (578), Expect = 1.460e-69 Identity = 130/249 (52.21%), Postives = 165/249 (66.27%), Query Frame = 1
Query: 1 IMHSNNEVGCLQPITEIAEACRQRR---------------------IMCHTDAAQSIGKVPVKVENLGVDMLTLVGHKFGAPKGVAALFVRRGLALPPMIHGGGQEAGRRAGTENVLLISGMGKAAEIVDVGLERLSKHLAAMRERLLELLMAA---NLGDGVKVHGPRNPSLRLPNTLSIGLPGVEARVLLERLSETVAASAGSACHAGEA-TMSGVLQAMGVDEPTGFGTLRLSVGRHTTRKEVDQA 672
+MHSNNEVG +QPI EIA A R+ ++ H+DAAQS GKV + V LGVD LT+VGHKFGAPKGVAAL++RRG+ L HGGGQE GRRAGTEN++ + G+G AAE+ RL +HL M ERL+E L A D ++++GPR P+ RLPNTLS+ + G+ + V L+RLS +AASAG+ACH+GEA ++S VL+AM V GTLRLS GRHTT +EVD A
Sbjct: 133 VMHSNNEVGAVQPIAEIAAAARRAHARFTXXXXXXXXXXGCTGTNGLLVHSDAAQSTGKVELDVRTLGVDALTIVGHKFGAPKGVAALYIRRGVHLDNYFHGGGQEGGRRAGTENIMQVVGLGAAAELARREGPRLRRHLGDMAERLMEALRAGLRPEDQDKLRLNGPRQPASRLPNTLSLSIRGLNSAVALQRLSGQLAASAGAACHSGEAASVSAVLRAMRVPFEFAAGTLRLSTGRHTTAEEVDAA 381 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14863.3705.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig14863.3705.1 >prot_Ecto-sp13_S_contig14863.3705.1 ID=prot_Ecto-sp13_S_contig14863.3705.1|Name=mRNA_Ecto-sp13_S_contig14863.3705.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=225bp MHSNNEVGCLQPITEIAEACRQRRIMCHTDAAQSIGKVPVKVENLGVDMLback to top mRNA from alignment at Ecto-sp13_S_contig14863:3..4314+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig14863.3705.1 ID=mRNA_Ecto-sp13_S_contig14863.3705.1|Name=mRNA_Ecto-sp13_S_contig14863.3705.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4312bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14863:3..4314+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig14863:3..4314+ >mRNA_Ecto-sp13_S_contig14863.3705.1 ID=mRNA_Ecto-sp13_S_contig14863.3705.1|Name=mRNA_Ecto-sp13_S_contig14863.3705.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=675bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14863:3..4314+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |