mRNA_Ecto-sp13_S_contig14845.3697.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig14845.3697.1 vs. uniprot
Match: D7FTI4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTI4_ECTSI) HSP 1 Score: 349 bits (896), Expect = 1.150e-113 Identity = 175/184 (95.11%), Postives = 178/184 (96.74%), Query Frame = 1
Query: 4 DATYRHPLAEENRSKYVTLQKDLGGFNNIRLSLECAVAIAAATGRTLVIPPPFQIWNMKGTAKNEVDLRELFSFDKLRASGRVNVITTAEFLEREAVTGNLGVQPDKSVMLLDVKAVEAYIEQVASQYDGGLPELSVERAALVMPRRIDGKVDLEDESYRFAKRWIYGRELLEYIGQPWEQAKV 555
DA YRHPLAEEN SKYVTLQKDLGGFNNIRLSLECAVAIAAATGRTLVIPPPFQIWNMKGTAK EVDLRELFSFDKLRASGRVNVITTAEFLEREAVTGNLGVQPDKSVMLLDVKAVEAY+EQVASQYDGGLPELSVERAALVMPRRIDGKVDLEDE Y FAK+WIYGRELLEY GQPWE+AKV
Sbjct: 365 DAAYRHPLAEENASKYVTLQKDLGGFNNIRLSLECAVAIAAATGRTLVIPPPFQIWNMKGTAKKEVDLRELFSFDKLRASGRVNVITTAEFLEREAVTGNLGVQPDKSVMLLDVKAVEAYMEQVASQYDGGLPELSVERAALVMPRRIDGKVDLEDERYGFAKKWIYGRELLEYQGQPWEEAKV 548
BLAST of mRNA_Ecto-sp13_S_contig14845.3697.1 vs. uniprot
Match: A0A6H5JBR4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBR4_9PHAE) HSP 1 Score: 351 bits (900), Expect = 1.620e-110 Identity = 176/184 (95.65%), Postives = 179/184 (97.28%), Query Frame = 1
Query: 4 DATYRHPLAEENRSKYVTLQKDLGGFNNIRLSLECAVAIAAATGRTLVIPPPFQIWNMKGTAKNEVDLRELFSFDKLRASGRVNVITTAEFLEREAVTGNLGVQPDKSVMLLDVKAVEAYIEQVASQYDGGLPELSVERAALVMPRRIDGKVDLEDESYRFAKRWIYGRELLEYIGQPWEQAKV 555
DATYRHPLAEE+ SKYVTLQKDLGGFNNIRLSLECAVAIAAATGRTLVIPPPF IWNMKGTAKNEVDLRELFSFDKLRASGRVNVITTAEFLEREAVTGNLGVQPDKSVMLLDVKAVEAY+EQVASQYDGGLPELSVE+AALVMPRRIDGKVDLEDESY FAKRWIYGRELLEY GQPWE AKV
Sbjct: 834 DATYRHPLAEEHGSKYVTLQKDLGGFNNIRLSLECAVAIAAATGRTLVIPPPFHIWNMKGTAKNEVDLRELFSFDKLRASGRVNVITTAEFLEREAVTGNLGVQPDKSVMLLDVKAVEAYMEQVASQYDGGLPELSVEKAALVMPRRIDGKVDLEDESYSFAKRWIYGRELLEYKGQPWEHAKV 1017
BLAST of mRNA_Ecto-sp13_S_contig14845.3697.1 vs. uniprot
Match: B5Y3N4_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B5Y3N4_PHATC) HSP 1 Score: 87.4 bits (215), Expect = 9.470e-17 Identity = 43/105 (40.95%), Postives = 63/105 (60.00%), Query Frame = 1
Query: 4 DATYRHPLAEENRSKYVTLQKDLGGFNNIRLSLECAVAIAAATGRTLVIPPPFQIW---NMKGTAKNEVDLRELFSFDKLRAS-GRVNVITTAEFLEREAVTGNL 306
D+ ++ P E +Y+T + D+GGFNN+R+S+E +AIA ATGRTLV+PP I+ GT K + F D L + +++I+T EFL RE + GNL
Sbjct: 107 DSKFKSPFLESGTQRYLTFEPDIGGFNNVRMSMETVIAIAHATGRTLVLPPEQNIYLLNKQSGTHKKSFSFADFFPLDTLSSEQDGLDIISTNEFLRREGIAGNL 211
BLAST of mRNA_Ecto-sp13_S_contig14845.3697.1 vs. uniprot
Match: A0A7S2XRR0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XRR0_9STRA) HSP 1 Score: 80.1 bits (196), Expect = 2.810e-14 Identity = 41/97 (42.27%), Postives = 57/97 (58.76%), Query Frame = 1
Query: 1 RDATYRHPLAE-ENRSKYVTLQKDLGGFNNIRLSLECAVAIAAATGRTLVIPPPFQIWNMKGTAKNEVDLRELFSFDKLRASGRVNVITTAEFLERE 288
RD ++ P AE E ++KY++ + D GG+NNIR+SLE +AAA GRTLV+PP ++ K E F+ L +V +ITT EFL RE
Sbjct: 154 RDIAFQSPFAEQEGKTKYISFEPDSGGWNNIRISLETIFILAAAMGRTLVMPPKQHLYLFNADGKKERSFSNFFALQNLELLKKVPIITTEEFLRRE 250
BLAST of mRNA_Ecto-sp13_S_contig14845.3697.1 vs. uniprot
Match: K0R8K8_THAOC (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R8K8_THAOC) HSP 1 Score: 77.8 bits (190), Expect = 2.320e-13 Identity = 47/120 (39.17%), Postives = 70/120 (58.33%), Query Frame = 1
Query: 1 RDATYRHPLAEEN---RSKYVTLQKDLGGFNNIRLSLECAVAIAAATGRTLVIPPPFQIWNMKGTAKNEVDLRELFSFDKLRASGRVNVITTAEFLEREAVTG----NLGVQPDKSVMLL 339
RD + P E+ ++KY+T + D GGFNNIR+SLE + IAA TGRTLV+PPP +I+ ++ +++ L + F + R+ VIT +EFL+RE G N+G + LL
Sbjct: 331 RDEEFESPFKVEDLPGKAKYLTFEPDPGGFNNIRMSLENILVIAAVTGRTLVLPPPQRIYLLQ----DKMQLSDFFPILNDKFQKRIKVITMSEFLQREMKEGGYLYNVGKDDNDEATLL 446
BLAST of mRNA_Ecto-sp13_S_contig14845.3697.1 vs. uniprot
Match: A0A7R9ZS86_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZS86_9STRA) HSP 1 Score: 77.0 bits (188), Expect = 3.370e-13 Identity = 52/172 (30.23%), Postives = 86/172 (50.00%), Query Frame = 1
Query: 1 RDATYRHPL--AEENRSKYVTLQKDLGGFNNIRLSLECAVAIAAATGRTLVIPPPFQIWNMKGTAKN-EVDLRELFSFDKLRASGRVNVITTAEFLEREAVTGNLGVQPD-------KSVMLLD-VKAVEAYIEQVASQYD--GGLPELSVERAALVMPRRIDGKVDLEDES 477
RD ++ P ++ + KY+T D GG+NNIR+S+E IAAATGRTLV+PP ++ ++G KN + F D +V +I+T EF+E+E + P+ KSV + + +K ++ E +A G +P+ + V + ++ DES
Sbjct: 14 RDQQFQPPFKGSDGDAEKYITFTVDTGGWNNIRMSMEIIFVIAAATGRTLVLPPKAPLYRLRGDLKNIHRGFADFFPLDTEEFQKKVKIISTEEFVEKEGGANGVAPIPEDMREGVMKSVKVCNKMKKMDNACENIAQYLSQVGHVPDARAKDYCFVFDEDVFNGDEVSDES 185
BLAST of mRNA_Ecto-sp13_S_contig14845.3697.1 vs. uniprot
Match: A0A7S3HL40_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HL40_9STRA) HSP 1 Score: 77.0 bits (188), Expect = 3.500e-13 Identity = 41/112 (36.61%), Postives = 65/112 (58.04%), Query Frame = 1
Query: 4 DATYRHPLAE---ENRSKYVTLQKDLGGFNNIRLSLECAVAIAAATGRTLVIPPPFQIWNM------KGTAK--NEVDLRELFSFDKLRASGRVNVITTAEFLEREAVTGNL 306
D TY P+ ++ KY+T + D GG+NN+R+ +EC + IA ATGRTLV+PP ++ + KG K +E+ + F D LR+ ++++ EFL +E V+G L
Sbjct: 17 DRTYESPITPHHADHHDKYLTFEYDAGGWNNVRMGMECLLVIAHATGRTLVVPPQQHLYLLGVNHQDKGDEKPHDEMGFEDFFDLDLLRSHQGLHIMHMEEFLAKEGVSGGL 128
BLAST of mRNA_Ecto-sp13_S_contig14845.3697.1 vs. uniprot
Match: A0A7S1ZW72_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZW72_TRICV) HSP 1 Score: 74.7 bits (182), Expect = 2.360e-12 Identity = 41/101 (40.59%), Postives = 62/101 (61.39%), Query Frame = 1
Query: 4 DATYRHPLAEENRSKYVTLQKDLGGFNNIRLSLECAVAIAAATGRTLVIPPPFQIWNMKGTAKNEVDLRELFSFDKLRASGRVNVITTAEFLEREAVTGNL 306
D + P EE KY+T + DLGG+NN+R+++E VA+A A GRTLV+ P +I+ ++ K+ D L + K ++V+T EFL++EAV GNL
Sbjct: 98 DTEFASPFKEEGEVKYLTFEHDLGGWNNMRMAMETMVALAHAMGRTLVLLPKTKIF-LQSEGKSYTDFFHLEALGKEHKG--IDVVTMDEFLQQEAVIGNL 195
BLAST of mRNA_Ecto-sp13_S_contig14845.3697.1 vs. uniprot
Match: A0A7S1VL35_9STRA (Hypothetical protein (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VL35_9STRA) HSP 1 Score: 72.8 bits (177), Expect = 3.320e-12 Identity = 43/112 (38.39%), Postives = 69/112 (61.61%), Query Frame = 1
Query: 4 DATYRHPLAEENRSKYVTLQKDLGGFNNIRLSLECAVAIAAATGRTLVIPPP---FQIWNMKGTAKN------EVDLRELFSFD--KLRASGRVNVITTAEFLEREAVTGNL 306
D+++ P ++++ KY+T + D GG+NNIR+S+E AVA+A A GRTLV+PP + + K +N + + F FD +L +G V VI+ +FL+RE +TG+L
Sbjct: 10 DSSFVSPFYDDSKPKYLTFEPDEGGWNNIRMSMETAVAMAHAMGRTLVLPPQQGMYLLQKQKNDHRNGTKQQHQFGFSDFFHFDSFELEHAG-VKVISFEDFLKREVLTGHL 120
BLAST of mRNA_Ecto-sp13_S_contig14845.3697.1 vs. uniprot
Match: B8BUS9_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BUS9_THAPS) HSP 1 Score: 73.9 bits (180), Expect = 5.220e-12 Identity = 41/91 (45.05%), Postives = 56/91 (61.54%), Query Frame = 1
Query: 34 ENRSKYVTLQKDLGGFNNIRLSLECAVAIAAATGRTLVIPPPFQIWNMKGTAKNEVDLRELFSFDKLRASGRVNVITTAEFLEREAVTGNL 306
++ +KY+T +D G FNNIR+SLE IAAATGRT+V+PP + +G + N+ D FSF+ RV VIT EF+ERE + L
Sbjct: 896 KDTAKYITFWQDSGRFNNIRISLEIIFVIAAATGRTIVLPPTQNLHLEQGPSINDFD--SFFSFNNDEFQKRVPVITMKEFIEREGRSSGL 984 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14845.3697.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig14845.3697.1 >prot_Ecto-sp13_S_contig14845.3697.1 ID=prot_Ecto-sp13_S_contig14845.3697.1|Name=mRNA_Ecto-sp13_S_contig14845.3697.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=185bp RDATYRHPLAEENRSKYVTLQKDLGGFNNIRLSLECAVAIAAATGRTLVIback to top mRNA from alignment at Ecto-sp13_S_contig14845:827..3738+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig14845.3697.1 ID=mRNA_Ecto-sp13_S_contig14845.3697.1|Name=mRNA_Ecto-sp13_S_contig14845.3697.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2912bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14845:827..3738+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig14845:827..3738+ >mRNA_Ecto-sp13_S_contig14845.3697.1 ID=mRNA_Ecto-sp13_S_contig14845.3697.1|Name=mRNA_Ecto-sp13_S_contig14845.3697.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=555bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14845:827..3738+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |