mRNA_Ecto-sp13_S_contig14842.3693.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig14842.3693.1 vs. uniprot
Match: A0A6H5KT02_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT02_9PHAE) HSP 1 Score: 237 bits (604), Expect = 1.250e-74 Identity = 150/184 (81.52%), Postives = 153/184 (83.15%), Query Frame = 1
Query: 1 VVRLLDALTYQGHYCLVTELFSGTLSLSRAEGRAGQRERTSVPTAAATAAEAPALXXXXXXXXXXXXXX-----SSTRSYSSAVEKWSVARLFVDKGTRESPGGFQRAGAPAEPSGRLGWGSVAGVGPSAPCGGGLEDSVSSNGSSSIGRKKGERSTGDGGAAGFPSGGGGCPVVVIRHVALHL 537
VVRLLDALTYQGHYCLVTELFSGTLSL AEG AGQRERTSVP XXXXXXXXXXXXXX SSTRSYSSAVEKWSVARLFVD+G RESPGGFQR GAPAEPSGRLGW S+AGVG S+P GGGLEDSVSSNGSS IGRKKGER GDGGAAGF SGGGGCPV VIRHVAL L
Sbjct: 30 VVRLLDALTYQGHYCLVTELFSGTLSLLGAEGGAGQRERTSVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHNSSTRSYSSAVEKWSVARLFVDQGARESPGGFQRVGAPAEPSGRLGWSSLAGVGASSPSGGGLEDSVSSNGSSGIGRKKGERGAGDGGAAGFSSGGGGCPVAVIRHVALQL 213
BLAST of mRNA_Ecto-sp13_S_contig14842.3693.1 vs. uniprot
Match: A0A7S2ST04_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2ST04_9STRA) HSP 1 Score: 80.1 bits (196), Expect = 2.250e-15 Identity = 51/113 (45.13%), Postives = 62/113 (54.87%), Query Frame = 1
Query: 502 PVVVIRHVALHLVSALLLLHSHGLIHADVKPENVLLRMEGRRQEGEGEGEACRRGRPLCLADFVSGRAGGGGGGVVERLTVKLGDLGSAIHRSETYLFYGDFEIQTLAYRAPE 840
P+ V+R VAL L+SALL L G+IHAD+KPENVLL + P A F G + VKL D G+AIHR+E L++ FEIQTLAYRAPE
Sbjct: 11 PLGVVRRVALDLISALLCLGHQGIIHADIKPENVLLSTDPE--------------PPATEASF--------GQLMSPPFRVKLADFGNAIHRAEAPLYHATFEIQTLAYRAPE 101
BLAST of mRNA_Ecto-sp13_S_contig14842.3693.1 vs. uniprot
Match: A0A4D9CR04_9STRA (Protein kinase domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CR04_9STRA) HSP 1 Score: 77.0 bits (188), Expect = 4.160e-12 Identity = 58/133 (43.61%), Postives = 67/133 (50.38%), Query Frame = 1
Query: 460 DGGAAGFPSGGGGCPVVVIRHVALHLVSALLLLHSHGLIHADVKPENVLLRMEGRRQEGEGEGEACRRGRPLCLADFVSGRAGGGGGGVVERLTVKLGDLGSAIHRSETYLFYGDFEIQTLAYRAPEAR--GC 852
DG G G G V ++R ALHLV ALLLLH+ +IHAD+KPENVLL G G+ R GG G RLT DLG+AI E L+ D+EIQTL YRAPE GC
Sbjct: 254 DGRRDGGRGAGPGLTVPLVREAALHLVKALLLLHNQDVIHADLKPENVLLAGPMGGALGPERGQHSPR----------------GGWGQHVRLT----DLGNAIKSREVKLYRDDYEIQTLGYRAPEVLVGGC 366
BLAST of mRNA_Ecto-sp13_S_contig14842.3693.1 vs. uniprot
Match: D8LS44_ECTSI (N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS44_ECTSI) HSP 1 Score: 72.4 bits (176), Expect = 1.460e-10 Identity = 35/38 (92.11%), Postives = 35/38 (92.11%), Query Frame = 3
Query: 747 VGRLGQRHPSQ*DVPVLRRLRDTDARLQGTRGKGVYLV 860
VGRLGQRHPSQ DVPVLRRL D DARLQGTRGKGVYLV
Sbjct: 98 VGRLGQRHPSQRDVPVLRRLPDADARLQGTRGKGVYLV 135
BLAST of mRNA_Ecto-sp13_S_contig14842.3693.1 vs. uniprot
Match: A0A835ZFW0_9STRA (Protein kinase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFW0_9STRA) HSP 1 Score: 69.7 bits (169), Expect = 1.180e-9 Identity = 47/119 (39.50%), Postives = 62/119 (52.10%), Query Frame = 1
Query: 502 PVVVIRHVALHLVSALLLLHSHGLIHADVKPENVLLRMEGRRQEGEGEGEACRRGRPLCLADFVSGRAGGGGGGVVERLTVKLGDLGSAIHRSETYLFYGDFEIQT-LAYRAPEA-RGC 852
PV +R +A+ L+S L+LL G++H ++KP+NVLL EG R L D G V+ L V L G A+HRSE L Y +F++QT LAYRAPE GC
Sbjct: 189 PVPAVRALAMRLLSGLVLLEQEGIVHGNLKPDNVLLSTAK-----EGSAATATRLDALLTRDRR--------GAVLGELLVTLCGFGHALHRSEARLHYENFDVQTTLAYRAPEVLHGC 294
BLAST of mRNA_Ecto-sp13_S_contig14842.3693.1 vs. uniprot
Match: A0A2P6MPE9_9EUKA (Protein kinase domain-containing protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6MPE9_9EUKA) HSP 1 Score: 65.1 bits (157), Expect = 4.160e-8 Identity = 39/114 (34.21%), Postives = 61/114 (53.51%), Query Frame = 1
Query: 514 IRHVALHLVSALLLLHSHGLIHADVKPENVLLRMEGR-RQEGEGEGEACRRGRPLCLAD----FVSGRAGGGGGGVVERLTVKLGDLGSAIHRSETYLFYGDFEIQTLAYRAPE 840
I + + ++S L +LH+ +IH D+KPEN++ + R E E EA RG F S + +K+ D G+AI RS+++L+Y +FE+Q+L YRAPE
Sbjct: 627 IAKITVQIISCLQMLHAENIIHGDLKPENIIFKHPIRLTSEHIEEHEASFRGMKASTEGPRKKFTS-------------VALKIADFGNAIDRSDSHLYYDNFEVQSLLYRAPE 727
BLAST of mRNA_Ecto-sp13_S_contig14842.3693.1 vs. uniprot
Match: A0A0H5RBC3_9EUKA (Protein kinase domain-containing protein (Fragment) n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5RBC3_9EUKA) HSP 1 Score: 63.2 bits (152), Expect = 1.030e-7 Identity = 40/109 (36.70%), Postives = 53/109 (48.62%), Query Frame = 1
Query: 514 IRHVALHLVSALLLLHSHGLIHADVKPENVLLRMEGRRQEGEGEGEACRRGRPLCLADFVSGRAGGGGGGVVERLTVKLGDLGSAIHRSETYLFYGDFEIQTLAYRAPE 840
+R VA+ LVSAL+ L GLIHAD+KPEN+LLR G + +KL DLG+++ ET ++ DF IQ+L YRAPE
Sbjct: 149 LRKVAVQLVSALIHLQKAGLIHADIKPENILLRTPDSDISCSGS------------------------------MAIKLTDLGNSVLSKETCAYWDDFNIQSLFYRAPE 227
BLAST of mRNA_Ecto-sp13_S_contig14842.3693.1 vs. uniprot
Match: L1JPH2_GUITC (Protein kinase domain-containing protein (Fragment) n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JPH2_GUITC) HSP 1 Score: 56.2 bits (134), Expect = 2.840e-6 Identity = 34/109 (31.19%), Postives = 57/109 (52.29%), Query Frame = 1
Query: 514 IRHVALHLVSALLLLHSHGLIHADVKPENVLLRMEGRRQEGEGEGEACRRGRPLCLADFVSGRAGGGGGGVVERLTVKLGDLGSAIHRSETYLFYGDFEIQTLAYRAPE 840
++ ++ L+++L L S+G++HAD++PENVLLR ++ E P L+ + VKL D+G++ + ++ DFE+QTL YRAPE
Sbjct: 28 LQKLSFQLLTSLSFLASNGVVHADIRPENVLLRESPWKKVNGRE-------LPKSLS-----------------IKVKLADMGNSFRMKNSSAYHDDFELQTLYYRAPE 112
BLAST of mRNA_Ecto-sp13_S_contig14842.3693.1 vs. uniprot
Match: A0A2P4YHK0_9STRA (CMGC protein Kinase n=2 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YHK0_9STRA) HSP 1 Score: 58.2 bits (139), Expect = 6.160e-6 Identity = 41/123 (33.33%), Postives = 56/123 (45.53%), Query Frame = 1
Query: 505 VVVIRHVALHLVSALLLLHSHGLIHADVKPENVLLRMEGRRQEGEGEGEACRRGRPLCLADFVSGRAGGGGGGVVERLTVKLGDLGSAIHRSETYLFY-----GDFEIQTLAYRAPEARGCTL 858
+V +R +A+HL AL LH GLIHADVKPENV+ + G G + C + VKL D G+ + SE ++ G F++QT+ YRAPE L
Sbjct: 165 LVDVRQMAVHLCGALAFLHDQGLIHADVKPENVV-------RSGAGSSTSLSS----CSSP------------------VKLVDFGNCLDASEVAVYAQEQTSGGFDVQTITYRAPEVAAGLL 258
BLAST of mRNA_Ecto-sp13_S_contig14842.3693.1 vs. uniprot
Match: A0A484ED60_BRELC (Protein kinase domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484ED60_BRELC) HSP 1 Score: 57.8 bits (138), Expect = 8.410e-6 Identity = 40/120 (33.33%), Postives = 54/120 (45.00%), Query Frame = 1
Query: 514 IRHVALHLVSALLLLHSHGLIHADVKPENVLLRMEGRRQEGEGEGEACRRGRPLCLADFVSGRAGGGGGGVVERLTVKLGDLGSAIHRSETYLFYGD-----FEIQTLAYRAPEARGCTL 858
+R +A HL AL LH GLIHAD+KPENV+ R E +C PLC + +KL D G+ + +E + G F++QT+ YRAPE L
Sbjct: 183 VRQIAAHLCGALAFLHDLGLIHADIKPENVV------RSNAEAFVGSCAS-LPLCSSP------------------IKLVDFGNCLTANELEAYNGKHTSGGFDVQTVTYRAPEVAAGLL 277 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14842.3693.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 22
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig14842.3693.1 >prot_Ecto-sp13_S_contig14842.3693.1 ID=prot_Ecto-sp13_S_contig14842.3693.1|Name=mRNA_Ecto-sp13_S_contig14842.3693.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=287bp VVRLLDALTYQGHYCLVTELFSGTLSLSRAEGRAGQRERTSVPTAAATAAback to top mRNA from alignment at Ecto-sp13_S_contig14842:169..1029+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig14842.3693.1 ID=mRNA_Ecto-sp13_S_contig14842.3693.1|Name=mRNA_Ecto-sp13_S_contig14842.3693.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=861bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14842:169..1029+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig14842:169..1029+ >mRNA_Ecto-sp13_S_contig14842.3693.1 ID=mRNA_Ecto-sp13_S_contig14842.3693.1|Name=mRNA_Ecto-sp13_S_contig14842.3693.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=861bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14842:169..1029+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |