mRNA_Ecto-sp13_S_contig1483.3680.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
|
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1483.3680.1 vs. uniprot
Match: D8LPW3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPW3_ECTSI) HSP 1 Score: 1117 bits (2888), Expect = 0.000e+0 Identity = 592/600 (98.67%), Postives = 594/600 (99.00%), Query Frame = 1
Query: 1 QLVKKAGWAIINKIPTMVKSRVDLASYLVEDAFGTVRDISKNVMSHYFVAATSQVLSFVGAMRALGSPADLISNIGGGAKALVYAPAQGLVQGPAEFFEXXXXXXXXXXKGTVKGVFNSVAGVGGAVTDTVSKLSFDNDYQLRRERDKNKAIANQGGVGHGLLQGSKDIAGGLTSGVSGIFMDPVSGAKKGGVGGFFKGVGKGLVGAVVKPVVGVTDSVISVAQGISNEAENVQRQKHLRPRRALTKDSETGQLVLLDFSMEAAEAQALVESGVEGKGSTGDKYESHTQISDLTIIFADTRMILVKRTKKDRLGSAKMLERSGAAKPLQMVSKPWEEVARVDAVGESIVIGRYNGGDISLKAAIGSRREELYRQFYVHRDKMGDPTAMRTPEEVFGTGAFEMAPPLAMTMRAYSTSMKDSLKAYTFGSACGRQIQSHGLSNAQVLDRAERQLQSFVVGNWSGLDYLTWELIQNWSSANVGMNSTRCLCVVFINASTSPVQFLEISKRDGQGYRLMIGPLCDVDSQQLLPGGVAILFAWGHPSTNILKQGFVAMVAETTAFSAVLAVQREKVTMSSKSGFQAGFLEKTMQERWSKQVVVIK 1800
+LVKKAGWAIINKIPTMVKSRVDLASYLVEDAFGTVRDISKNV+SHYFVAATSQVLSFVGAMRALGSPADLISNIGGGAKALVYAPAQGLVQGPAEFFEXXXXXXXXXXKGTVKGVFNSVAGVGGAVTDTVSKLSFDNDYQLRRERDKNKAIANQGGVG GLLQGSKDIAGGLTSGVSGIFMDPVSGAKKGGVGGFFKGVGKGLVGAVVKPVVGVTDSVISVAQGISNEAENVQRQKHLRPRRALTKDSETGQLVLLDFSMEAAEAQALVESGV GKGSTGDKYESHTQISDLTIIFADTRMILVKRTK DRLGSAKMLERSGAAKPLQMVSKPWEEVARVDAV ESIVIGRYNGGDISLKAAIGSRREELYRQFYVHRDKMGDPTAMRTPEEVFGTGAFEMAPPLAMTMRAYSTSMKDSLKAYTFGSACGRQIQSHGLSNAQVLDRAERQLQSFVVGNWSGLDYLTWELIQNWSSANVGMNSTRCLCVVFINASTSPVQFLEISKRDGQGYRLMIGPLCDVDSQQLLPGGVAILFAWGHPSTNILKQGFVAMVAETTAFS V AVQREKVTMSSKSGFQAGFLEKTMQERWSKQVVVIK
Sbjct: 3165 RLVKKAGWAIINKIPTMVKSRVDLASYLVEDAFGTVRDISKNVISHYFVAATSQVLSFVGAMRALGSPADLISNIGGGAKALVYAPAQGLVQGPAEFFEXXXXXXXXXXKGTVKGVFNSVAGVGGAVTDTVSKLSFDNDYQLRRERDKNKAIANQGGVGQGLLQGSKDIAGGLTSGVSGIFMDPVSGAKKGGVGGFFKGVGKGLVGAVVKPVVGVTDSVISVAQGISNEAENVQRQKHLRPRRALTKDSETGQLVLLDFSMEAAEAQALVESGVAGKGSTGDKYESHTQISDLTIIFADTRMILVKRTKNDRLGSAKMLERSGAAKPLQMVSKPWEEVARVDAVAESIVIGRYNGGDISLKAAIGSRREELYRQFYVHRDKMGDPTAMRTPEEVFGTGAFEMAPPLAMTMRAYSTSMKDSLKAYTFGSACGRQIQSHGLSNAQVLDRAERQLQSFVVGNWSGLDYLTWELIQNWSSANVGMNSTRCLCVVFINASTSPVQFLEISKRDGQGYRLMIGPLCDVDSQQLLPGGVAILFAWGHPSTNILKQGFVAMVAETTAFSGVFAVQREKVTMSSKSGFQAGFLEKTMQERWSKQVVVIK 3764
BLAST of mRNA_Ecto-sp13_S_contig1483.3680.1 vs. uniprot
Match: A0A6H5JHN3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JHN3_9PHAE) HSP 1 Score: 557 bits (1435), Expect = 6.170e-168 Identity = 317/453 (69.98%), Postives = 359/453 (79.25%), Query Frame = 1
Query: 4 LVKKAGWAIINKIPTMVKSRVDLASYLVEDAFGTVRDISKNVMSHYFVAATSQ------VLSFVGAMRALGSPADLISNIGGGAKALVYAPAQGLVQGPAEFFEXXXXXXXXXXKGTVKGVFNSVAGVGGAVTDTVSKLSFDNDYQLRRERDKNKAIANQGGVGHGLLQGSKDIAGGLTSGVSGIFMDPVSGAKKGGVGGFFKGVGKGLVGAVVKPVVGVTDSVISVAQGISNEAENVQRQKHLRPRRALTKDSETGQLVLLDFSMEAAEAQALVESGVEGKGSTG-DKYESHTQISDLTIIFADTRMILVKRTKKDRLGSAKMLERSGAAKPLQMVSKPWEEVARVDAVGESIVIGRYNGGDISLKAAIGSRREELYRQFYVHRDKMGDPTAMRTPEEVFGTG---AFEMAPPLAMTMRAYSTSMKDSLKAYTFGSACGRQIQSHGLSNAQV 1332
L+++AG AIINKIP+MVKS VDLASYLVEDAFG+VRDISKNV+SHY VA + Q VLS VG+MRALGSPADLISN+GGGAKALVYAPAQGLVQGP EFFE G +G + V GVGGAVTDTVSKL+FD++YQL+RERDKNKA+ANQGGVG GL+QG K+IAGG TSGVSG+F DPV GAKKGG+GGFFKGVGKGL GAVVKPVVGVTDSVISVAQ HLRPRRALTKDSETGQLVL++FSMEAAEAQALVESGVEGKGS+ DKYESHT++ DLTIIFA+TRMI+VKR K + A+M A + VSK WEEVA VD E IVI Y GGDISLKA + S REELYRQFYVHR+KMGDPTA+RTPEEVFGTG A E A P+AM+MRA+ST+++DSL YTFG+A R+I H LS +QV
Sbjct: 2845 LMEEAGMAIINKIPSMVKSNVDLASYLVEDAFGSVRDISKNVVSHYTVAGSMQANLLSTVLSLVGSMRALGSPADLISNVGGGAKALVYAPAQGLVQGPGEFFE-----------GVGRGAQSFVKGVGGAVTDTVSKLTFDDEYQLKRERDKNKALANQGGVGQGLVQGGKNIAGGFTSGVSGVFTDPVRGAKKGGMGGFFKGVGKGLAGAVVKPVVGVTDSVISVAQ------------VHLRPRRALTKDSETGQLVLMEFSMEAAEAQALVESGVEGKGSSSRDKYESHTRVGDLTIIFANTRMIMVKRAKV-KTERARM-----KAMIFRWVSKRWEEVACVDVQDERIVIRLYEGGDISLKATVRSNREELYRQFYVHRNKMGDPTAVRTPEEVFGTGSAGASERAAPVAMSMRAHSTAVQDSLNDYTFGTANDRKIPGHKLSESQV 3268
BLAST of mRNA_Ecto-sp13_S_contig1483.3680.1 vs. uniprot
Match: A0A836C8S3_9STRA (Peroxin/Ferlin domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8S3_9STRA) HSP 1 Score: 422 bits (1084), Expect = 1.070e-121 Identity = 254/631 (40.25%), Postives = 366/631 (58.00%), Query Frame = 1
Query: 4 LVKKAGWAIINKIPTMVKSRVDLASYLVEDAFGTVRDISKNVMSHYFVAATSQVLSFVGAMRALGSPADLISNIGGGAKALVYAPAQGLVQGPAEFFEXXXXXXXXXXKGTVKGVFNSVAGVGGAVTDTVSKLSFDNDYQLRRERDKNKAIANQGGVGHGLLQGSKDIAGGLTSGVSGIFMDPVSGAKKGGVGGFFKGVGKGLVGAVVKPVVGVTDSVISVAQGISNEAENVQRQKHLRPRRALT--KDSETGQLVLLDFSMEAAEAQALVESGVEGKGSTGDKYESHTQISD-LTIIFADTRMILVKRTKKDRLGSAKMLERSGAAKPLQMVSKPWEEVARVDAVGESIVIGRYNGGDISLKAAIGSRREELYRQFYVHRDKMGDPTAMRTPEEVFGTGAF-----------------EMAPPLA------------MTMRAYSTSMKDSLKAYTFGSACGRQIQSHGLSNAQVLDRAERQLQSFVVGNWSGLDYLTWELIQNWSSANVGMNSTRCLCVVFINASTSPVQFLEISKRDGQGYRLMIGPLCDVDSQQLLPGGVAILFAWGHPSTNILKQGFVAMVAETTAFSAVLAVQREKVTMSSKSGFQAGFLEKTMQERWSKQVVVIK 1800
L + A +I IPT+ +SR+ + SYLVE+AFG ++ N+M HY A +QVL VG++RALGSPAD +S +G GAKAL+YAP + P EFF V GVFNS+AGV G +T+ +KL+ D DY+ +RE + +A+ GGV GL +G ++IAGG+ GVSGIF P+ GAK GVGGF KGVG G++GAVVKPVVG++D V+SV QG+SN ++NV +K LRPRRAL + T Q VL+ +S AAEAQ L + D Y H + + + ++F + ++I+V++ + + + S W+ ++ + + IV+ Y G I L +R +YRQ H D MG+PT M + +VFG A E +P M+ ++++ SL AYTFG A + L+ A ++ RAE++L+ VGNW LD L+WEL+Q W + G + +RCL VVFINAS + VQF E+ K+D G+RL+ GP CD+ ++Q+ PGGV IL AWG+ + ++LK+G V + ETTAFSA+ + R+ + M SK + GF E+T+ E +SKQVV+IK
Sbjct: 3589 LAEAAQLQLIGAIPTVHRSRLAMTSYLVENAFGVRDELLNNIMHHYITQAVTQVLKLVGSIRALGSPADFVSGVGSGAKALLYAPISASILEPGEFFRYVCRCFWL-----VHGVFNSMAGVAGGMTNVAAKLALDKDYRRKREARQVGWMASGGGVVDGLARGGENIAGGVYEGVSGIFTTPIRGAKNAGVGGFLKGVGHGVLGAVVKPVVGLSDGVVSVLQGVSNSSDNVVAKKPLRPRRALELMPGTSTMQAVLVPYSQAAAEAQELAYA-------LDDLYMGHALLPNGMLLVFGEKKIIMVQQREDGKK---------------KTFSPTWQAISHAEVTQQGIVLLTYEGPRIGLSIPDLEQRVTVYRQLLAHADAMGNPTRMPSVCDVFGAAAASGTSSTDVSAAAFWARNEESPSATGEDSEALRRGSNSAMQNLTSAVTASLDAYTFGRANRNAVPFERLTEAGLIARAEQKLRLVGVGNWERLDSLSWELVQLWDQNHTGFSRSRCLAVVFINASPAAVQFNEVFKQDALGWRLLAGPQCDLAARQMSPGGVCILLAWGY-TPSLLKRGTVEIRIETTAFSALFTLDRKLLYMRSKGAYSCGFAEETITEWYSKQVVIIK 4191
BLAST of mRNA_Ecto-sp13_S_contig1483.3680.1 vs. uniprot
Match: A0A6H5L0S6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0S6_9PHAE) HSP 1 Score: 377 bits (969), Expect = 8.900e-107 Identity = 205/225 (91.11%), Postives = 208/225 (92.44%), Query Frame = 1
Query: 1 QLVKKAGWAIINKIPTMVKSRVDLASYLVEDAFGTVRDISKNVMSHYFVAATSQVLSFVGAMRALGSPADLISNIGGGAKALVYAPAQGLVQGPAEFFEXXXXXXXXXXKGTVKGVFNSVAGVGGAVTDTVSKLSFDNDYQLRRERDKNKAIANQGGVGHGLLQGSKDIAGGLTSGVSGIFMDPVSGAKKGGVGGFFKGVGKGLVGAVVKPVVGVTDSVISVAQG 675
QLVKKAGWAIINKIPTMVKSRVDLASYLVEDAFGTVRDISKNVMSHYFVAATSQVLSFVGAMRALGSPADLISNIGGGAKALVYAPAQGLVQGPAEFFE G +G + V GVGGAVTDTVSKLSFDNDYQLRRERDKNKAIA+QGGVGHGLLQGSKDIAGGLTSGVSGIFMDPVSGAKKGGVGGFFKGVGKGLVGAVVKPVVGVTDSVISVAQG
Sbjct: 2551 QLVKKAGWAIINKIPTMVKSRVDLASYLVEDAFGTVRDISKNVMSHYFVAATSQVLSFVGAMRALGSPADLISNIGGGAKALVYAPAQGLVQGPAEFFE-----------GVGRGAHSFVKGVGGAVTDTVSKLSFDNDYQLRRERDKNKAIASQGGVGHGLLQGSKDIAGGLTSGVSGIFMDPVSGAKKGGVGGFFKGVGKGLVGAVVKPVVGVTDSVISVAQG 2764
BLAST of mRNA_Ecto-sp13_S_contig1483.3680.1 vs. uniprot
Match: A0A7S2W8U1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W8U1_9STRA) HSP 1 Score: 272 bits (696), Expect = 4.940e-74 Identity = 202/629 (32.11%), Postives = 290/629 (46.10%), Query Frame = 1
Query: 70 LASYLVEDAFGTVRDISKNVMSHYFVAATSQVLSFVGAMRALGSPADLISNIGGGAKALVYAPAQGLVQGPAEFFEXXXXXXXXXXKGTVKGVFNSVAGVGGAVTDTVSKLSFDNDYQLRRE-RDKNKAIANQGGVGHGLLQGSKDIAGGLTSGVSGIFMDPVSGAKKGGVGGFFKGVGKGLVGAVVKPVVGVTDSVISVAQGISNEAEN--VQRQKHLRPRRALTKDSETGQLVLLDFSMEAAEAQALV--ESGVEGKGSTG---------------------DKYESHTQISDLTIIFADTRMILVKRTKKDRLGSAKMLERSGAAKPLQMVSKPWEEVARVDAVGESIVIGRYNGGDI---------SLKAAIGSRREELYRQFYVHRDKMGDPTAMRTPEEVF------GTGAFEMAPPLAMTMRAYSTSMKDSLKA-YTFGSACGRQIQS-HGLSNAQVLDRAERQLQSFVVGNWSGLD--------YLTWELIQNWSSANVGMNSTRCLCVVFINASTSPVQFLEISKRDGQGYRLMIGPLCDVDSQQLLPGGVAILFAWGHPSTNILKQGFVAMVAETTAFSAVLAVQREKVTMSSKSGFQAGFLEKTM--QERWSKQVVVI 1797
L+S+LVEDA TV ++K + HY SQ+ G++ A+G+P DL+SN+GGG KA +Y PAQGLV GP EF + G V GV SVAGVG V ++ L+FD++Y RE R + GG+G G + + + GG+ GV+G+F P+ GA+K G+GG KG+G+G++G VKPVVGVT++ +SV Q SN + HLRPRRA+ T ++VL F AAE Q V +S V G G D Y +H + + + ++++ + D VS+PW +VA S+ + Y ++ L A + R ELY++ Y HR MGDP M + + V G G+ A A S S ++ Y FG+ G ++S G V+ L+ V SGLD W LI W + N + + +N ST PVQF E + GQG +++ G D + L PGG A+ W KQ A++ +T+A LA R K +K GF AG LE + + W+K VV I
Sbjct: 269 LSSFLVEDAIETVGTVAKILAQHYTGQVLSQLYKLAGSIAAIGNPVDLVSNVGGGVKAFIYEPAQGLVLGPEEFVKGGLRGTGSLVSGVVHGVTQSVAGVGDTVNRNLALLAFDDEYAAEREMRRSSTKQGGTGGIGAGFVNAGESLVGGIAEGVTGVFTAPIRGARKEGLGGLAKGLGRGILGLAVKPVVGVTEAAVSVVQTASNATSGDVTEELTHLRPRRAIPMLPGTTRMVLTPFDQHAAECQEAVFPQSTVSPTGDLGKQLRERTSRQRRLRRHQRALDDAYVAHLALEHGVTVVLSLKHLVIRTEQGD-------------------VSRPWHQVAFCTPEKRSVRVHFYTQVEVVKGVPSNRFDLPAPAPALRLELYQRIYAHRAAMGDPRRMPSIDAVTADDRSGGPGSSAATAFQAEDAAAEDASSGPSRRSSYIFGTVNGSAVKSLRGAGEDDVIRECHASLRR--VSTSSGLDDRMRRELDACCWTLIARWDQVHNVFNKKKLAVALIVNESTKPVQFNEPQLQIGQGVQVLHGAAYDPSFRHLAPGGAAMFVCWSTGPVLFQKQHVEALI-QTSAIVLHLADSRRKTRAQAKPGFSAGLLEHSSHPEREWTKIVVAI 875
BLAST of mRNA_Ecto-sp13_S_contig1483.3680.1 vs. uniprot
Match: W7U6N6_9STRA (Vacuolar protein sortingassociated protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U6N6_9STRA) HSP 1 Score: 260 bits (665), Expect = 7.660e-68 Identity = 190/625 (30.40%), Postives = 305/625 (48.80%), Query Frame = 1
Query: 28 IINKIPTMVKSRVDLASYLVEDAFGTVRDISKNVMSHYFVAATSQVLSFVGAMRALGSPADLISNIGGGAKALVYAPAQGLVQGPAEFFEXXXXXXXXXXKGTVKGVFNSVAGVGGAVTDTVSKLSFDNDYQLRRERDKNKAIANQGGVGHGLLQGSKDIAGGLTSGVSGIFMDPVSGAKKGGVGGFFKGVGKGLVGAVVKPVVGVTDSVISVAQGISNEAENVQRQKHLRPRRALTKDSETGQLVLLDFSMEAAEAQALVESGVEGKGSTGDKYESHTQISD--LTIIFADTRMILVKRTKKDRLGSAKMLERSGAAKPLQMVSKPWEEVARVDAVGESIVIGR------------YNGGDISLKAAIGSRREE----LYRQFYVHRDKMGDPTAMRT---------PEEVFGTGAFEMAPPLAMTMRAYSTSMKDSLKAYTFGSACGRQIQSHGLSNAQVLDRA-ERQLQSFVVGNWSGLDYLTWELIQNWSSANVG-MNSTRCLCVVFINASTSPVQFLEISKRDGQGYRLMIGPLCDVDSQQLLPGGVAILFAWGHPSTNILKQGFVAMVAETTAFSAVLAVQREKV-TMSSKSGFQAGFLEKTMQERWSKQVVVIK*RRN 1812
++ + ++ ++ + + S+ VE T + V++HY A +Q+L+ G++ LGSP DL++++G G K Y P GLV P EF + KG V G NSVAGVG ++ V+ L+ D +Y + RE+ + A A G+ GL G G G+SG+F+ PV A+ GG+GGF KGVGKG+VG VKP+VGV+D+V+SV QG S A++++ +RPRRAL + S GQ VL D+S+ AA Q +E G D Y H + +IF D + L + R G +PW ++A + E+ G+ Y + S + EE +Y Q + HRD+MG+ + M++ +E GTG + R+ + Y FGS + ++ L + ++ RA +R ++S+ W LD W++I +W+ + G N +C+ V+ +N TS VQ + RDG ++ + S+ L P G ++FAW H +++K +A+ ETTAF +KV + ++ G F+EKT + + K VVV++ RR+
Sbjct: 2469 VVKNLASISRAPLQMKSFQVEHVMETPPFFLQIVLAHYKRQALAQILTIAGSLSTLGSPLDLVTSVGTGVKDFFYEPINGLVHSPQEFAKGLKRGTTSLLKGVVSGALNSVAGVGDSLNRNVAMLAADREYTVAREQRRQAATAGGTGLLDGLKDGGDSFVRGFADGISGVFLSPVKEARTGGIGGFLKGVGKGVVGLAVKPLVGVSDAVVSVIQGASQAAQDLEVHVPVRPRRALPRWSVAGQKVLTDYSLSAALVQERLEPG--------DAYVCHVSLEKEGKDVIFTDKHLSLFNPS------------RGGV-----FWKRPWRDIAWCEVTEETREGGKEGRKNRGIWLHLYRNDNESKGTLLQIDGEEDVWKVYAQLWRHRDRMGNGSMMKSVGTLQQEGLEQEKEGTGE------MVGDGRSPQFVGGGLVDGYVFGSKNDQDLRCRKLRSWDIVARARDRMIKSWTT--WPELDDAVWKVINDWTKNHWGPWNFRKCMAVLVVNKGTSGVQLQNMQFRDGSEVHVIESRGFEATSRVLSPEGAVLIFAWSH-IPSLVKNANIAVRMETTAFKGEFT---DKVGNLEARPGSDVSFVEKTRKSAYVKYVVVVRDRRS 3056
BLAST of mRNA_Ecto-sp13_S_contig1483.3680.1 vs. uniprot
Match: A0A4D9D3E8_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D3E8_9STRA) HSP 1 Score: 260 bits (664), Expect = 1.110e-67 Identity = 190/625 (30.40%), Postives = 305/625 (48.80%), Query Frame = 1
Query: 28 IINKIPTMVKSRVDLASYLVEDAFGTVRDISKNVMSHYFVAATSQVLSFVGAMRALGSPADLISNIGGGAKALVYAPAQGLVQGPAEFFEXXXXXXXXXXKGTVKGVFNSVAGVGGAVTDTVSKLSFDNDYQLRRERDKNKAIANQGGVGHGLLQGSKDIAGGLTSGVSGIFMDPVSGAKKGGVGGFFKGVGKGLVGAVVKPVVGVTDSVISVAQGISNEAENVQRQKHLRPRRALTKDSETGQLVLLDFSMEAAEAQALVESGVEGKGSTGDKYESHTQIS--DLTIIFADTRMILVKRTKKDRLGSAKMLERSGAAKPLQMVSKPWEEVARVDAVGESIVIGR------------YNGGDISLKAAIGSRREE----LYRQFYVHRDKMGDPTAMRT---------PEEVFGTGAFEMAPPLAMTMRAYSTSMKDSLKAYTFGSACGRQIQSHGLSNAQVLDRA-ERQLQSFVVGNWSGLDYLTWELIQNWSSANVG-MNSTRCLCVVFINASTSPVQFLEISKRDGQGYRLMIGPLCDVDSQQLLPGGVAILFAWGHPSTNILKQGFVAMVAETTAFSAVLAVQREKV-TMSSKSGFQAGFLEKTMQERWSKQVVVIK*RRN 1812
++ + ++ ++ + + S+ VE T + V++HY A +Q+L+ G++ LGSP DL++++G G K Y P GLV P EF + KG V G NSVAGVG ++ V+ L+ D +Y + RE+ + A A G+ GL G G G+SG+F+ PV A+ GG+GGF KGVGKG+VG VKP+VGV+D+V+SV QG S A++++ +RPRRAL + S GQ VL D+S+ AA Q ++ G D Y H + + +IF D + L + R G +PW ++A + E+ GR Y + S + EE +Y Q + HRD+MG+ + M++ +E GTG + R+ + Y FGS + ++ L + ++ RA +R +S+ W LD W++I +W+ + G N +C+ V+ +N TS VQ + RDG ++ + S+ L P G ++FAW H +++K +A+ ETTAF +KV + ++ G F+EKT + + K VVV++ RR+
Sbjct: 3302 VVKNLASISRAPLQMKSFQVEHVMETPPFFLQIVLAHYKRQALAQILTIAGSLSTLGSPLDLVTSVGTGVKDFFYEPINGLVHSPQEFAKGLKRGTTSLLKGVVSGALNSVAGVGDSLNRNVAMLAADREYTVAREQRRQAATAGGTGLVDGLRDGGDSFVRGFADGISGVFLSPVKEARTGGIGGFLKGVGKGVVGLAVKPLVGVSDAVVSVIQGASQAAQDLEVHVPVRPRRALPRWSVAGQKVLTDYSLSAALVQERLDPG--------DAYVCHVSLEKEEKDVIFTDKHLSLFNPS------------RGGV-----FWKRPWRDIAWCEVTKETREGGREGRKNRGIWLHLYRNDNESKGTLLQIDGEEDVWKVYAQLWRHRDRMGNGSMMKSVGTLQQEGLEQEKEGTGE------VVGDGRSPQFVGGGLVDGYVFGSKNDQDLRCRKLRSWDIVARARDRMTKSWTT--WPELDDAVWKVINDWTKNHWGPWNFRKCMAVLVVNKGTSGVQLQNMHFRDGSEVHVIESRGFEATSRVLSPEGAVLIFAWSH-IPSLVKNANIAVRMETTAFKGEFT---DKVGNLEARPGSDVSFVEKTRKSAYVKYVVVVRDRRS 3889
BLAST of mRNA_Ecto-sp13_S_contig1483.3680.1 vs. uniprot
Match: A0A7S3Y5K3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y5K3_HETAK) HSP 1 Score: 231 bits (588), Expect = 1.030e-58 Identity = 164/598 (27.42%), Postives = 274/598 (45.82%), Query Frame = 1
Query: 25 AIINKIPTMVKSRVDLASYLVEDAFGTVRDISKNVMSHYFVAATSQVLSFVGAMRALGSPADLISNIGGGAKALVYAPAQGLVQGPAEFFEXXXXXXXXXXKGTVKGVFNSVAGVGGAVTDTVSKLSFDNDYQLRRERDKNKAIANQGGVGHGLLQGSKDIAGGLTSGVSGIFMDPVSGAKKGGVGGFFKGVGKGLVGAVVKPVVGVTDSVISVAQGISNEAENVQRQKHLRPRRALTKDSETGQLVLLDFSMEAAEAQALVESGVEGKGSTGDKYESHTQISDLTIIFADTRMILVKRTKKDRLGSAKMLERSGAAKPLQMVSKPWEEVARVDAVGESIV-IGRYNGGDISLKAAIGSRREELYRQFYVH------RDKMGDPTAMRTPEEVFGTGAFEMAPPLAMTMRAYSTSMKDSLKAYTFGSACGRQIQSHGLSNAQVLDRAERQLQSFVVGNWSGLDYLTWELIQNWSSANVGMNSTRCLCVVFINASTSPVQFLEISKRDGQGYRLMIGPLCDVDSQQLLPGGVAILFAWGHPSTNILKQGFVAMVAETTAFSAVLAVQREKVTMSSKSGFQAGFLEKTMQERWSKQVVVI 1797
+I+ ++ ++ +++ L S+ + T + + + Y +SQVL G++ LGSPADL+SNIG G Y P GL+ GP+ F + K V G FNS+AGVGG + L+FD ++Q GG G+ QG++++ G+ +G++G+ PV GA++GG+GGF +GV V D+ +SV +G+S A + LR RRAL D +G++VL +S AA AQ V + + GD YE ++ +F D R+++V R +R PW E+A D GE +V + +G + L A + EEL + H R + DP R P + +G A E ++ + + + Y +G G + L +++ A L +W +D + W LI W + G +C+ VV +N S+ +Q + G+ + + GP + LLP G ++FA+GH + + K V + ET +FS ++ + K + G+Q LE +M+E++ K V+ +
Sbjct: 607 SILAEMVSLDHAQIKLKSFGADYVMETPEGFGRTLTAFYVRQLSSQVLKIAGSISMLGSPADLLSNIGTGVGDFFYEPYDGLMLGPSAFAKGVKRGATSLVKNVVHGAFNSLAGVGGGAVHGLGALTFDQEFQXXXXXXXXXXXXXXGGFRSGVAQGARNLGSGVVAGLTGVVAQPVRGARQGGLGGFVRGVXXXXXXXXXXXXXXVGDAGVSVLEGVSQGALGDTLYRPLRRRRALDLDPRSGKVVLTPYSALAASAQE-----VATEQAPGDAYEGFLALTASWAVFTDRRLVVVLRATAERQ------------------FYPWHEIAFYDLPGEHLVEVHLPDGASVPLHCAGPEQTEELLARLAPHGAAMSQRGRNHDPR--RAPRD-WGRRAVETR---SLQDQDFDKTSYARKLTYRWGEINGTHLPYEALDKDAIINHARDALPKLNSDDWPAIDNVVWRLISEWKDNHTGFGVRKCIAVVIVNLSSVNIQLRGVDVTSGRLHETLPGPRYSEAGRTLLPQGSVVVFAYGHRAKYVSKST-VELTLETDSFSGTISNRSGKALLQPAPGYQVDVLEASMEEKYCKFVIGV 1174
BLAST of mRNA_Ecto-sp13_S_contig1483.3680.1 vs. uniprot
Match: A0A482T661_9ARCH (VPS13_C domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482T661_9ARCH) HSP 1 Score: 167 bits (424), Expect = 2.520e-38 Identity = 174/667 (26.09%), Postives = 292/667 (43.78%), Query Frame = 1
Query: 28 IINKIPTMVKSRVDLASYLVEDAFGTVRDISKNVMSHYFVAATSQVL----SFVGAMRALGSPADLISNIGGGAKALVYA---------------------PAQGLVQGPAEFFEXXXXXXXXXXKGTVKGVFNSVAGVGGAVTDTVS-------KLSFDNDYQLRRERDKNKAIANQGGVGHGLLQGSKDIAGGLTSGVSGIFMDPVSGAKKGGVGGFFKGVGKGLVGAVVKPVVGVTDSVISVAQGISNEAENVQRQKHLRPRRALTK-DSETGQLVLLDFSMEAAEAQALVESGVEGKGSTGDKYESHTQISDLTIIFADTRMILVKRTKKDRLGSAKMLERSGAAKPLQMVSKPWEEVARVDAVGES-IVIGRYN---GGDIS------------LKAAIGSRREELYRQFYVHRDKMGDPTAMRTPEEVF------------GTGAFEMAPPLAMTMRAYSTSMKDS-LKAYTFGSACGRQIQSHGLSNAQVLDRAERQLQSFVVGN-----------WSGLDYLTWELIQNWSSAN-VGMNSTRCLCVVFINASTSPVQFLEISKRDGQGYRLMIGPLCDVDSQ--QLLP-GGVAILFAWGHPSTNILKQGFVAMVAETTAFSAVLAVQREKVTMSSKSGFQAGFLEKTMQERWSKQVVVI 1797
++ I V + S++ ++A + +S +++ + +L + +G++ LG PA L NIGGG + Y P GL++ P F + KG GV +S A V G T V+ KLS D Y +RE K + +GG+ G G+ P+ +K G GF KGVG+GLVG VKPV+GVT+ + +VA GI++ +H RP RA+ + D E LVL +M A AQA + + K Y+ T ++ T+ F +++ +A+ + + K +++K + + + S I + + N G +IS L A S ++Y + Y R G+P AM +P + + + RA ++ K S ++ Y FG+A ++ L+ V+++ ++ S V LD + WEL+ NW+S + + +N +RCL +V IN S +PV+ ++S ++G Y +++G DS+ L P GG A+LFA+G + I K+ V + +TAF+ ++A + + SS +GF FLEKT + W+K V+ I
Sbjct: 2178 VVESISGFEDMAVKVKSFIAKNALESPDSLSTRIVNKIVRDMQANLLGLAGNLIGSLSILGKPAGLYKNIGGGVQDFFYEVTFACLMLFNILFLHVSCYLQPYTGLMESPLSFAKGVTKGTGSLLKGVTTGVVSSTANVVGTATGGVTSLAKGVAKLSGDQKYIKQREEKKREFQTARGGIFSGFKAGTXXXXXXXXXXXXXXVTKPLEQGQKEGALGFIKGVGQGLVGVAVKPVMGVTEGISNVAMGINHHFSESLSGQHFRPPRAMIRRDVEDADLVLGRLNMFDARAQAFLNNRALSKN-----YKD-TFLTAFTLGFGVSKV-----------ENAQAYGVAISTKVFAVLNKECDAIWMIPVPSISHISLAKINDTFGLEISDYEQKLSPSQRYLMCASKSNAIQVYSEAYRFRSIFGNPAAMYSPADSLLHLQALNPDSSSSQSTAHSDHSASNSPRALASVRKQSSIQTYKFGTANSSKVPVSRLNEQGVINKTCEKMSSLAVKPPVTIPDQVYFFHKLLDEIAWELVNNWNSNHDMIINPSRCLVMVIINHSHAPVRITDVSLKEG-AYTVIMGAAGGYDSKFMTLTPAGGAALLFAYGKRPSLISKE-HVKVSVSSTAFTCMVATRENRSECSSLAGFSPSFLEKTRNDWWAKYVLSI 2825
BLAST of mRNA_Ecto-sp13_S_contig1483.3680.1 vs. uniprot
Match: A0A1Z5JHE9_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JHE9_FISSO) HSP 1 Score: 166 bits (421), Expect = 5.910e-38 Identity = 164/600 (27.33%), Postives = 267/600 (44.50%), Query Frame = 1
Query: 76 SYLVEDAFGTVRDISKNVMSHYFVAATSQVLSFVGAMRALGSPADLISNIGGGAKALVYAPAQGLVQGPAEFFEXXXXXXXXXXKGTVKGVFNSVAGVGGAVTDTVSKLSFDNDYQLRR---ERDKNKAIANQGGVGHGLLQGSKDIAGG-----LTSGVSGIFMDPVSGAKKGGVGGFFKGVGKGLVGAVVKPVVGVTDSVISVAQGISNEA--ENVQRQKHLRPRRALT-KDSETGQLVLLD-FSMEAAEAQALVESGVEGKGSTGDKYESHTQISDLTIIFADTRMILVKRTKKDRLGSAKMLERSGAAKPLQMVSKPWEEVARVDAVGESI--VIGRYNGGDISL-KAAIGSRREELYRQFYVHRDKMGDPTAMRTPEEVFGTGAFEMAPPLAMTMRAYSTSMKDSLKAYTFGSACG--RQIQSHGLSNAQVLDRAE---RQLQSFVVGNWSGLDYLTWELIQNWSSANVGMNSTRCLCVVFINASTSPVQFLEISKRDGQGYRLMIGPLCDVDSQQ--LLPGGVAILFAWGHPSTNILKQGFVAMVAETTAFSAVLAVQREKVTMS-SKSGFQAGFLEKTMQER--WSKQVVVIK 1800
S++V F + + + + +HY T Q+ +G++ LG+PAD ISN+G G + Y P QG V GP +F E +G GV V+ V V ++ L+ D+++ R +R I+ G+ H S +AG + SG GI P A K G GF KGVGK L+GAVVKPVVG+ D+ + V +S+ + + + +R RRAL + E V L+ F AA+AQ +V G + D Y H I + II ++ + + R ++ WEE++ + E I VI NG + + ++ +L+ + KM + + + A A P +++ R +K + FGS R++ S+ + ++++ R + S + LD W L+ NW G++S RC+ IN + P+Q +G I P + D+QQ L GG + FAWG + N+L+ G V M ET AF LA +++ T + G++ GFLEK+ + W+K ++ +
Sbjct: 2498 SFVVGHVFEAPQTLMRVIATHYSSQLTKQIFGILGSLAILGAPADFISNVGSGVRDFFYEPIQGAVHGPRQFIEGLEAGTQSLARGLFVGVVRGVSNVTEVVNTNLAGLTADDEFMDERRAYQRIMTDTISR--GLEHRTFSDSLYLAGASVARSVRSGALGIVEQPGVYASKQGPVGFAKGVGKALIGAVVKPVVGIGDAAVLVMNHLSDATSKKRIIPKIPIRMRRALPCRSIEKINCVRLEPFDERAAKAQRIVTGG----DTLDDVYIGHIDIPNHLIIASEQCLWAIDRRSREPW------------------CVDWEEISHFGTLDEGIRIVIFSQNGVKAYMFQTESSAQSTQLHNLLSMQSRKMANSSELED--------AILSADPDSLSRRTIP-GIKARQVDHVFGSFNNSKRRLGSNMKNEVDLVEQCRARVRAIGSESSSYFRSLDDEAWSLVSNWGQVFSGLSSRRCIVASIINGTDGPLQIKSAKLLEGGSPCYSI-PTKEYDAQQGILYSGGCILFFAWGV-APNLLQAGNVFMHIETNAFECELADHKDRATYGKAMPGYKLGFLEKSYDDSGWWAKYWILTR 3062 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1483.3680.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1483.3680.1 >prot_Ecto-sp13_S_contig1483.3680.1 ID=prot_Ecto-sp13_S_contig1483.3680.1|Name=mRNA_Ecto-sp13_S_contig1483.3680.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=585bp MVKSRVDLASYLVEDAFGTVRDISKNVMSHYFVAATSQVLSFVGAMRALGback to top mRNA from alignment at Ecto-sp13_S_contig1483:334..9999+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1483.3680.1 ID=mRNA_Ecto-sp13_S_contig1483.3680.1|Name=mRNA_Ecto-sp13_S_contig1483.3680.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=9666bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1483:334..9999+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1483:334..9999+ >mRNA_Ecto-sp13_S_contig1483.3680.1 ID=mRNA_Ecto-sp13_S_contig1483.3680.1|Name=mRNA_Ecto-sp13_S_contig1483.3680.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1755bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1483:334..9999+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |