mRNA_Ecto-sp13_S_contig14821.3678.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig14821.3678.1
Unique NamemRNA_Ecto-sp13_S_contig14821.3678.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig14821.3678.1 vs. uniprot
Match: A0A6H5KYH2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYH2_9PHAE)

HSP 1 Score: 301 bits (772), Expect = 2.470e-96
Identity = 257/323 (79.57%), Postives = 259/323 (80.19%), Query Frame = 1
Query:    1 RTWMDDAENSLNRGGVETARAIYAHALGHFRSKKGVWMRACALEKKHGTAESLEQARGPTQMLKKAVTHCPRAEMLWLMAAKEKWLSNDVDGARTIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXACDRAPTALVWMKAALLERELKAPEAALKLIDTALPSYPTFAKLYMMAGQLCSEELNLPERAREYYQRGLRACPGSIPLWRLAARLEERTVGVNKARPMLEVARLRNPKSEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEQKSKSLEALKRCDNDPHVITAVARRFWADRK 969
            RTWMDDAENSLNRGGVETARAIYAHALGHFRSKKGV                                                            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXACDRAPTALVWMKAALLEREL+APEAALKLIDTALPSYPTFAKLYMMAGQLCSEEL+LPERAREYYQRGLRACPGSIPLWRLAARLEERTVGVNKARPMLEVARLRNPKSEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    AEQKSKSLEALKRCDNDPHVITAVARRFWADRK
Sbjct:   52 RTWMDDAENSLNRGGVETARAIYAHALGHFRSKKGVXXXXXXXXXXXXXXXXXXXXXXXXXXX------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXACDRAPTALVWMKAALLERELQAPEAALKLIDTALPSYPTFAKLYMMAGQLCSEELDLPERAREYYQRGLRACPGSIPLWRLAARLEERTVGVNKARPMLEVARLRNPKSEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAQRAEQKSKSLEALKRCDNDPHVITAVARRFWADRK 368          
BLAST of mRNA_Ecto-sp13_S_contig14821.3678.1 vs. uniprot
Match: D7FHD2_ECTSI (PRP1_N domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHD2_ECTSI)

HSP 1 Score: 305 bits (781), Expect = 7.960e-94
Identity = 263/323 (81.42%), Postives = 263/323 (81.42%), Query Frame = 1
Query:    1 RTWMDDAENSLNRGGVETARAIYAHALGHFRSKKGVWMRACALEKKHGTAESLEQARGPTQMLKKAVTHCPRAEMLWLMAAKEKWLSNDVDGARTIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXACDRAPTALVWMKAALLERELKAPEAALKLIDTALPSYPTFAKLYMMAGQLCSEELNLPERAREYYQRGLRACPGSIPLWRLAARLEERTVGVNKARPMLEVARLRNPKSEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEQKSKSLEALKRCDNDPHVITAVARRFWADRK 969
            RTWMDDAENSLNRGGVETARAIYAHALGHFRSKKGV                                                            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXACDRAPTALVWMKAALLERELKAPEAALKLIDTALPSYPTFAKLYMMAGQLCSEELNLPERAREYYQRGLRACPGSIPLWRLAARLEERTVGVNKARPMLEVARLRNPKSEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEQKSKSLEALKRCDNDPHVITAVARRFWADRK
Sbjct:  413 RTWMDDAENSLNRGGVETARAIYAHALGHFRSKKGVXXXXXXXXXXXXXXXXXXXXXXXXXXX------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXACDRAPTALVWMKAALLERELKAPEAALKLIDTALPSYPTFAKLYMMAGQLCSEELNLPERAREYYQRGLRACPGSIPLWRLAARLEERTVGVNKARPMLEVARLRNPKSEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEQKSKSLEALKRCDNDPHVITAVARRFWADRK 729          
BLAST of mRNA_Ecto-sp13_S_contig14821.3678.1 vs. uniprot
Match: A0A7S3XY73_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XY73_HETAK)

HSP 1 Score: 252 bits (644), Expect = 1.350e-74
Identity = 209/297 (70.37%), Postives = 237/297 (79.80%), Query Frame = 1
Query:   79 LGHFRSKKGVWMRACALEKKHGTAESLEQARGPTQMLKKAVTHCPRAEMLWLMAAKEKWLSNDVDGARTIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXACDRAPTALVWMKAALLERELKAPEAALKLIDTALPSYPTFAKLYMMAGQLCSEELNLPERAREYYQRGLRACPGSIPLWRLAARLEERTVGVNKARPMLEVARLRNPKSEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEQKSKSLEALKRCDNDPHVITAVARRFWADRK 969
            L  F +KKGVW+RACALEKKHG  E     R    ML++AV +CP+AE+LWLMAAKE+WL+ DV GAR + XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   A ++APTA VWMK ALLEREL  PEAAL+L+D     YPTFAK YMM GQ C E+L  P+RAR YYQ GLR CPGS+PLWRLAARL+ER +G  KARP+LE+ARLRNPK   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX          ++K++S+EALKRCDNDPHV+ AVAR F +DRK
Sbjct:  341 LAAFPTKKGVWLRACALEKKHGDPEG----RALAAMLRRAVAYCPQAEVLWLMAAKERWLAGDVAGARAVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRRAREKAPTARVWMKGALLERELGRPEAALELVDGGARRYPTFAKFYMMGGQACDEDLAAPDRARRYYQDGLRRCPGSLPLWRLAARLDERELGAAKARPVLELARLRNPKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEEIGAAPRPQRKARSVEALKRCDNDPHVVLAVARLFASDRK 633          
BLAST of mRNA_Ecto-sp13_S_contig14821.3678.1 vs. uniprot
Match: A0A507DC59_9FUNG (PRP1_N domain-containing protein n=1 Tax=Synchytrium endobioticum TaxID=286115 RepID=A0A507DC59_9FUNG)

HSP 1 Score: 207 bits (528), Expect = 5.220e-57
Identity = 161/322 (50.00%), Postives = 213/322 (66.15%), Query Frame = 1
Query:    4 TWMDDAENSLNRGGVETARAIYAHALGHFRSKKGVWMRACALEKKHGTAESLEQARGPTQMLKKAVTHCPRAEMLWLMAAKEKWLSNDVDGARTIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXACDRAPTALVWMKAALLERELKAPEAALKLIDTALPSYPTFAKLYMMAGQLCSEELNLPERAREYYQRGLRACPGSIPLWRLAARLEERTVGVNKARPMLEVARLRNPKSEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEQKSKSLEALKRCDNDPHVITAVARRFWADRK 969
            T+++DAE+ +  G + TARAI+AHA       + +W +A  LEK+HGT ESLE+      +LK+AV +CP AE+LWLM AK+KWL  D+DGAR +                                     A + A T  VWMK+A+ ER+L  P+AA+KL+D AL  +P+ AKL+MM GQ+  +E      ARE+Y +G+++C  SIPLW L++RLEE+   + +AR +LE ARL NP ++  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   +KSKS +ALK+C+NDP V+  +AR FW++RK
Sbjct:  521 TFVEDAESCIAHGSIVTARAIFAHATSLLPKDRSLWQKAAFLEKEHGTNESLEE------LLKRAVRYCPDAEVLWLMGAKQKWLMGDIDGARAVLQEAFAANPNSEQLYLAAVKLEAENEQYHRARPLLAKARNEAGTVRVWMKSAVFERQLGQPDAAIKLLDEALVKFPSAAKLWMMRGQVEEDENGNLAAAREFYAKGVKSCSKSIPLWILSSRLEEKADMMTRARALLERARLLNPANDLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPTRKSKSTDALKKCENDPRVLVTIARLFWSERK 836          
BLAST of mRNA_Ecto-sp13_S_contig14821.3678.1 vs. uniprot
Match: A0A1V9ZAY2_9STRA (Pre-mRNA-processing factor n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZAY2_9STRA)

HSP 1 Score: 206 bits (524), Expect = 2.220e-56
Identity = 165/323 (51.08%), Postives = 200/323 (61.92%), Query Frame = 1
Query:    1 RTWMDDAENSLNRGGVETARAIYAHALGHFRSKKGVWMRACALEKKHGTAESLEQARGPTQMLKKAVTHCPRAEMLWLMAAKEKWLSNDVDGARTIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXACDRAPTALVWMKAALLERELKAPEAALKLIDTALPSYPTFAKLYMMAGQLCSEELNLPERAREYYQRGLRACPGSIPLWRLAARLEERTVGVNKARPMLEVARLRNPKSEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEQKSKSLEALKRCDNDPHVITAVARRFWADRK 969
            RTWMDDAE    R  + TA+AIYAHAL  F  KK +W+RA ALEK+  T  S   A     +L++A+T CP  E+LWLMAAKE WL   V+ AR  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    AP+A VWMK+ LLERE +  +A  +L+ + +  Y +F KL+MMAGQ   E++   E AR+ Y+ GL ACP S+PLWRL+ARLEE T G  KAR +LEVARLRNPK++                                               ++K  SLEALK+ DNDP V  AVA+ FW +RK
Sbjct:  545 RTWMDDAETFTGRQALATAKAIYAHALATFPGKKSIWLRAVALEKQINTPASKAAAMS---LLREAITACPTCELLWLMAAKEAWLQGSVEDARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAVAPSARVWMKSVLLERETQRGDAEEELLRSGIERYKSFDKLHMMAGQFY-EDMGNVEAARKAYRDGLAACPKSVPLWRLSARLEEATAGATKARSVLEVARLRNPKNDLLWLEAVRLEMRLGNTKGQENLLAKALQDCPESGVLLAEAIDNAPRTQKKRVSLEALKKKDNDPAVCLAVAKLFWHERK 863          
BLAST of mRNA_Ecto-sp13_S_contig14821.3678.1 vs. uniprot
Match: A0A067CRR5_SAPPC (PRP1_N domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CRR5_SAPPC)

HSP 1 Score: 202 bits (513), Expect = 7.250e-55
Identity = 159/323 (49.23%), Postives = 195/323 (60.37%), Query Frame = 1
Query:    1 RTWMDDAENSLNRGGVETARAIYAHALGHFRSKKGVWMRACALEKKHGTAESLEQARGPTQMLKKAVTHCPRAEMLWLMAAKEKWLSNDVDGARTIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXACDRAPTALVWMKAALLERELKAPEAALKLIDTALPSYPTFAKLYMMAGQLCSEELNLPERAREYYQRGLRACPGSIPLWRLAARLEERTVGVNKARPMLEVARLRNPKSEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEQKSKSLEALKRCDNDPHVITAVARRFWADRK 969
            RTWMDDAE    R    TA+AIYAHAL  F +KK +W+RA ALEK+  T  S   A    ++L  ++  CP  E+LWLMAAKE WL   V+ AR+I   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    APTA VWMK+ LLERE +   A   L+ + + +Y +F KLYMMAGQ   E+    E AR+ Y+ G+ ACP S+PLWRL++RLEE+  G  KAR +LEVARLRNPK++                                               ++K  SLEALK+ DNDP V  +VA+ FW +RK
Sbjct:  546 RTWMDDAETFTARSAFATAKAIYAHALETFPAKKSIWLRAVALEKQINTPASKAHAM---ELLVASIAACPHCELLWLMAAKEAWLQGSVEDARSILRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPTARVWMKSVLLERETERGAAEEDLLKSGMANYKSFDKLYMMAGQFY-EDHEQWEAARQAYRDGIAACPKSVPLWRLSSRLEEKLQGATKARSVLEVARLRNPKNDLLWLEAIRLEGRHANVKGQENLLAKALQDCPDSGLLLAASIDMAPRTQKKRVSLEALKKKDNDPSVCLSVAKLFWHERK 864          
BLAST of mRNA_Ecto-sp13_S_contig14821.3678.1 vs. uniprot
Match: A0A7S3MCI9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MCI9_9STRA)

HSP 1 Score: 199 bits (505), Expect = 5.150e-54
Identity = 125/319 (39.18%), Postives = 159/319 (49.84%), Query Frame = 1
Query:    4 TWMDDAENSLNRG--GVETARAIYAHALGHFRSKKGVWMRACALEKKHGTAESLEQARGPTQMLKKAVTHCPRAEMLWLMAAKEKWLSNDVDGARTIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXACDRAPTALVWMKAALLERELKAPEAALKLIDTALPSYPTFAKLYMMAGQLCSEELNLPERAREYYQRGLRACPGSIPLWRLAARLEERTVGVNKARPMLEVARLRNPKSEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEQKSKSLEALKRCDNDPHVITAVARRF 954
            TWMDDAE  L+    G+ETARAI   AL  +  KK +W +A  LEK HGTA +LE        L++ V HCP+AE+LWLM AKEKWL  DV GAR I                                     A + AP+  VW+K+ALLERE+  P+ ALKL++ A+  YP F+K Y+MAGQ+  EEL    +AR  Y  G++A P  +PLWR   RLEER  GV +ARP  E ARLR P ++                                                QKS+S++ALK C +DP V+ AVAR F
Sbjct:  540 TWMDDAEVCLSHDPPGIETARAILTFALEKYPQKKRLWQQAAMLEKDHGTAVTLEAK------LREGVQHCPKAEILWLMWAKEKWLGGDVPGAREILKNAFATNSQSQQIWLAAVKLEWENDEFERARLLLLKAREGAPSERVWLKSALLEREVGRPQEALKLLEEAMKRYPAFSKFYLMAGQVLDEELKEVVKARNVYLAGIQATPECVPLWRSLIRLEERVKGVIRARPTGEQARLRLPGNDLVWLECIRLERRSGHEKLAESLMAKALRECPKSGALWAEELLTCAKPLQKSRSIDALKACTDDPLVLVAVARLF 852          
BLAST of mRNA_Ecto-sp13_S_contig14821.3678.1 vs. uniprot
Match: K3WCC0_GLOUD (PRP1_N domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WCC0_GLOUD)

HSP 1 Score: 198 bits (503), Expect = 1.880e-53
Identity = 164/326 (50.31%), Postives = 200/326 (61.35%), Query Frame = 1
Query:    1 RTWMDDAENSLNRGGVETARAIYAHALGHFRSKKGVWMRACALEKKHGTAESLEQARGPTQMLKKAVTHCPRAEMLWLMAAKEKWLSNDVDGARTIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXACDRAPTALVWMKAALLEREL-KAPEAALKLIDTALPSYPTFAKLYMMAGQLCSEELNLP--ERAREYYQRGLRACPGSIPLWRLAARLEERTVGVNKARPMLEVARLRNPKSEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEQKSKSLEALKRCDNDPHVITAVARRFWADRK 969
            RTWMDDAEN   RG + TA+AI+A+AL  F  KK +W+RA ALEK+    E         Q+L+KAVT CP AE+LWLMAAKE W +  V+ AR  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   +AP+A VWMK+ LLERE  + PE    L+   +  YP FAKLYMM GQ   E  + P  ERA+  Y+ G++ CP SIPLW L++RLEE+  GV KAR +LE+ARL+NPK++                                              A+QK  S  ALK+ DNDP V  +VA+ FW +RK
Sbjct:  567 RTWMDDAENCAGRGALLTAKAIFANALKVFPGKKSIWLRAVALEKQIN--EGKNNGESVEQLLQKAVTACPHAEILWLMAAKEVWTNGSVENARLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAQAPSAHVWMKSVLLERECAENPEVEENLLKEGIKLYPDFAKLYMMGGQFY-EAQSPPQYERAKSMYRDGVQHCPKSIPLWILSSRLEEKMNGVTKARSVLELARLKNPKNDRLWLEAARLEARWDNPKGQEMLMAKALQECPESGLLLAESIDIAPRAQQKRASFTALKKKDNDPSVCLSVAKLFWQERK 889          
BLAST of mRNA_Ecto-sp13_S_contig14821.3678.1 vs. uniprot
Match: A0A1V9ZC51_9STRA (Pre-mRNA-processing factor n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZC51_9STRA)

HSP 1 Score: 196 bits (498), Expect = 1.200e-52
Identity = 153/323 (47.37%), Postives = 190/323 (58.82%), Query Frame = 1
Query:    1 RTWMDDAENSLNRGGVETARAIYAHALGHFRSKKGVWMRACALEKKHGTAESLEQARGPTQMLKKAVTHCPRAEMLWLMAAKEKWLSNDVDGARTIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXACDRAPTALVWMKAALLERELKAPEAALKLIDTALPSYPTFAKLYMMAGQLCSEELNLPERAREYYQRGLRACPGSIPLWRLAARLEERTVGVNKARPMLEVARLRNPKSEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEQKSKSLEALKRCDNDPHVITAVARRFWADRK 969
            RTW+DDAE   ++G   TA+AIY+ AL  F +KK +W+RA ALEK+  TA+S         +L+KA+  CP  E+LWLMAAKE WL   VD AR+I        XXXXXXXXXXXXXXXXXXXXXXXXXXXXX    APTA VWMK+ LLERE++   A   L+   +  Y TF K+YMMAGQ      N  E AR+ Y+ G+ ACP S+PLW+L+  LEERT G  KAR +LE+ARLRNPK++                                               ++K  SLEALK+ DNDP V  +V+R FW +RK
Sbjct:  699 RTWIDDAETFTSKGAYITAKAIYSVALETFPTKKSIWLRAVALEKQMNTADSKANIM---VLLQKAIEACPLCEVLWLMAAKEAWLQGSVDEARSILRRAFLQNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPTARVWMKSILLEREIEIDSAEEALLLEGMGRYKTFDKMYMMAGQYYEGRENW-ESARKAYRDGIAACPKSVPLWKLSCNLEERTQGPVKARTVLELARLRNPKNDLLWLEAVRLERRHGNIKGQENLLAKALQECPDSGMLLAESIELAPRTQKKRVSLEALKKKDNDPAVCLSVSRLFWHERK 1017          
BLAST of mRNA_Ecto-sp13_S_contig14821.3678.1 vs. uniprot
Match: A0A150G7Y9_GONPE (PRP1_N domain-containing protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150G7Y9_GONPE)

HSP 1 Score: 195 bits (496), Expect = 1.290e-52
Identity = 173/322 (53.73%), Postives = 208/322 (64.60%), Query Frame = 1
Query:   16 DAENSLNRGGVETARAIYAHALGHFRSKKGVWMRACALEKKHGTAESLEQARGPTQMLKKAVTHCPRAEMLWLMAAKEKWLSNDVDGARTIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXACDRAPTAL---VWMKAALLERELKAPEAALKLIDTALPSYPTFAKLYMMAGQLCSEELNLPERAREYYQRGLRACPGSIPLWRLAARLEERTVG-VNKARPMLEVARLRNPKSEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEQKSKSLEALKRCDNDPHVITAVARRFWADRK 969
            DAE S  RG VETARA+YA AL  F S+  +W  A +LEK HGT   L++      +L++AVT CP+AE+LWLMAAKE WL  DVDG+R  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA +    +    VWMK+A++EREL   +   +L++  +  +PTF K Y+M GQL     N+ + AR  Y+ GL  CP  IPLWR AARLEE   G V +AR +LE ARLRNP    XXXXXXXXXXXXX                                  ++SK+ +ALKRCDNDPHV+ AVA+ FWADRK
Sbjct:  512 DAEESAKRGSVETARALYAQALATFPSQAHIWRAAASLEKSHGTRAQLDE------LLRRAVTFCPQAEVLWLMAAKEAWLGGDVDGSRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARENEAASSYPRVWMKSAIVERELGDADKERQLLEEGIRRFPTFEKFYLMLGQLEQRAGNV-DGARTAYRNGLARCPNCIPLWRSAARLEEEAGGGVARARALLEQARLRNPXXXXXXXXXXXXXXXXXNEKAAEVALAKALQDCPTSGPLWAEAIAAAPRPARRSKATDALKRCDNDPHVVAAVAQLFWADRK 826          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14821.3678.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KYH2_9PHAE2.470e-9679.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FHD2_ECTSI7.960e-9481.42PRP1_N domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A7S3XY73_HETAK1.350e-7470.37Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A507DC59_9FUNG5.220e-5750.00PRP1_N domain-containing protein n=1 Tax=Synchytri... [more]
A0A1V9ZAY2_9STRA2.220e-5651.08Pre-mRNA-processing factor n=1 Tax=Achlya hypogyna... [more]
A0A067CRR5_SAPPC7.250e-5549.23PRP1_N domain-containing protein n=2 Tax=Saprolegn... [more]
A0A7S3MCI9_9STRA5.150e-5439.18Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
K3WCC0_GLOUD1.880e-5350.31PRP1_N domain-containing protein n=1 Tax=Globispor... [more]
A0A1V9ZC51_9STRA1.200e-5247.37Pre-mRNA-processing factor n=1 Tax=Thraustotheca c... [more]
A0A150G7Y9_GONPE1.290e-5253.73PRP1_N domain-containing protein n=1 Tax=Gonium pe... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14821contigEcto-sp13_S_contig14821:380..4322 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score299.3
Seed ortholog evalue2.2e-78
Seed eggNOG ortholog2880.D7FHD2
Model size969
KEGG koko:K12855
KEGG Pathwayko03040,map03040
KEGG ModuleM00354
Hectar predicted targeting categoryother localisation
GOsGO:0000244,GO:0000375,GO:0000377,GO:0000387,GO:0000398,GO:0003674,GO:0003676,GO:0003712,GO:0003713,GO:0003723,GO:0003824,GO:0004553,GO:0004565,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005681,GO:0005682,GO:0005684,GO:0005737,GO:0005773,GO:0006139,GO:0006259,GO:0006304,GO:0006305,GO:0006306,GO:0006355,GO:0006357,GO:0006396,GO:0006397,GO:0006403,GO:0006725,GO:0006807,GO:0006950,GO:0007275,GO:0008134,GO:0008150,GO:0008152,GO:0008380,GO:0009266,GO:0009409,GO:0009628,GO:0009791,GO:0009845,GO:0009889,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0015030,GO:0015925,GO:0016043,GO:0016070,GO:0016071,GO:0016458,GO:0016604,GO:0016607,GO:0016787,GO:0016798,GO:0019219,GO:0019222,GO:0022607,GO:0022613,GO:0022618,GO:0030312,GO:0030532,GO:0031047,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031974,GO:0031981,GO:0032259,GO:0032501,GO:0032502,GO:0032991,GO:0033036,GO:0034622,GO:0034641,GO:0035257,GO:0035258,GO:0043021,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043414,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0044728,GO:0044877,GO:0045893,GO:0045935,GO:0045944,GO:0046483,GO:0046540,GO:0048518,GO:0048519,GO:0048522,GO:0048583,GO:0048584,GO:0048856,GO:0050681,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051179,GO:0051252,GO:0051254,GO:0051427,GO:0060147,GO:0060148,GO:0060255,GO:0060964,GO:0060966,GO:0060968,GO:0065003,GO:0065007,GO:0070013,GO:0070920,GO:0071005,GO:0071011,GO:0071013,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0080090,GO:0080188,GO:0090304,GO:0090351,GO:0097159,GO:0097525,GO:0097526,GO:0120114,GO:0140110,GO:1901360,GO:1901363,GO:1902494,GO:1902680,GO:1903506,GO:1903508,GO:1903798,GO:1903800,GO:1990904,GO:2000112,GO:2000628,GO:2000630,GO:2000634,GO:2000636,GO:2000637,GO:2001141
Exons6
EggNOG free text desc.spliceosomal tri-snRNP complex assembly
EggNOG OGsKOG0495@1,KOG0495@2759
Cds size960
COG Functional cat.A
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03041
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14821.3678.1prot_Ecto-sp13_S_contig14821.3678.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig14821 389..4322 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462791.024776-UTR-Ecto-sp13_S_contig14821:379..3881681462791.024776-UTR-Ecto-sp13_S_contig14821:379..388Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig14821 380..388 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462791.0363019-CDS-Ecto-sp13_S_contig14821:388..5571681462791.0363019-CDS-Ecto-sp13_S_contig14821:388..557Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14821 389..557 +
1681462791.045466-CDS-Ecto-sp13_S_contig14821:968..11171681462791.045466-CDS-Ecto-sp13_S_contig14821:968..1117Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14821 969..1117 +
1681462791.063634-CDS-Ecto-sp13_S_contig14821:1428..16501681462791.063634-CDS-Ecto-sp13_S_contig14821:1428..1650Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14821 1429..1650 +
1681462791.0758493-CDS-Ecto-sp13_S_contig14821:2537..26981681462791.0758493-CDS-Ecto-sp13_S_contig14821:2537..2698Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14821 2538..2698 +
1681462791.085634-CDS-Ecto-sp13_S_contig14821:3458..36311681462791.085634-CDS-Ecto-sp13_S_contig14821:3458..3631Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14821 3459..3631 +
1681462791.0955162-CDS-Ecto-sp13_S_contig14821:4236..43221681462791.0955162-CDS-Ecto-sp13_S_contig14821:4236..4322Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14821 4237..4322 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig14821.3678.1

>prot_Ecto-sp13_S_contig14821.3678.1 ID=prot_Ecto-sp13_S_contig14821.3678.1|Name=mRNA_Ecto-sp13_S_contig14821.3678.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=320bp
MDDAENSLNRGGVETARAIYAHALGHFRSKKGVWMRACALEKKHGTAESL
EQARGPTQMLKKAVTHCPRAEMLWLMAAKEKWLSNDVDGARTILKEAFLA
NPDSEQVWLAAVKLEWENNAFERARILLKKACDRAPTALVWMKAALLERE
LKAPEAALKLIDTALPSYPTFAKLYMMAGQLCSEELNLPERAREYYQRGL
RACPGSIPLWRLAARLEERTVGVNKARPMLEVARLRNPKSEGLWLEAVRL
ERRAGNNKGADSLMAKALQECPGSGVLWAEEILVAQRAEQKSKSLEALKR
CDNDPHVITAVARRFWADRK
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mRNA from alignment at Ecto-sp13_S_contig14821:380..4322+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig14821.3678.1 ID=mRNA_Ecto-sp13_S_contig14821.3678.1|Name=mRNA_Ecto-sp13_S_contig14821.3678.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3943bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14821:380..4322+ (Ectocarpus species13 EcNAP12_S_4_19m)
AGGACCTGGATGGATGATGCGGAGAACTCCCTTAACCGCGGAGGTGTGGA GACGGCGCGGGCGATCTACGCCCATGCCTTGGGCCACTTCAGGTCCAAGA AGGGCGTGTGGATGCGGGCCTGCGCTCTTGAGAAGAAGCACGGCACTGCA GAGTCGCTGGAGCAGGCAAGAGGACCGAGTTAGCTAGCTCTAAGCAGGAC AACGCCACCGAAGCGGTTGTACTATTGCCGCTGCTTGCATACGTGTGGCC TGTCTTGTTTACTTTTCTGTGTGTCAACTGGATGGTAACGCTGGGCGTAG CCATGCGCCACGGCAAACGTACCGCTCTACTGGTGTGGACGCTAGTCACC CACCTTCTCTGTGTGCGTTTTCAGTTTGAAAGCCTTGGTTCTCAGAGGGA GCGGGGGCGTTAACTTGCCACACCTCCCCCCACCCCGTGTGTTTCTATGT TGTCGTTCATTGTATGCCTTTTTTTTCGTTCGTCACTTGAAGTCAGCGCT CAAAACGATTCTGCCGCATTGCATGCCGTTCTTTGTTTTTCTCTCGTATT GTTGTTGTTGTTGTTGTCGTCGTTGTTGTTGTTGTTGAGCGCAGATGTTG AAGAAGGCCGTGACTCACTGTCCCCGTGCGGAGATGCTGTGGCTCATGGC GGCGAAGGAGAAGTGGCTCAGCAACGACGTCGACGGGGCGAGGACCATCC TCAAGGAGGCTTTCCTTGCAAACCCTGACAGCGAGCAGGTACTGCTATTA TTGTTGTTTTTAGAATGAAACGCATCGAAAGGCGGCCGTATATGTATATA TGTTTTTTTCACCACTTTGTATCATCTCAGTGCTCACAGCGTTTCTACTG GGTATTGGAGCTCCGATCTTTGGTCACGCAGCGGAAGGGTTCCGCTCTAC TTGAGACCACCCATCCTCCACTCCTGCGGTGCATGCACCTTGAAAGTGCC GCGAGAGCAAACCTCTGACTACGCGAGTGTGACTGGTGATGTACTGCTGT TGCGTGTTTTTTTCATGCTGCTTGCAAATTCGAACTCCTAATGAAAAAGG TGTGGCTGGCTGCGGTGAAGCTGGAGTGGGAGAACAACGCCTTTGAGCGA GCCCGCATCCTGCTCAAGAAGGCGTGCGACCGCGCCCCCACGGCGCTAGT GTGGATGAAAGCCGCCCTGCTAGAGAGGGAGCTCAAGGCGCCCGAGGCGG CGCTGAAGCTGATCGACACAGCGCTGCCGTCCTACCCCACTTTCGCCAAG CTCTACATGATGGCGGGACAGGTGCGTTTTTTTGGCCTTGACCCTGCTGC TAGCCACTCCGTTGATCTATGGACCATTGTGGTATTCACGTCCTAGCCCT GCTGCTTACCGCTCCGTTTTTATAGGGACCATTGGGGTATTCACGTCATG GCCCTGCTGCCTTCACTCCGTTGATACAGGGACCATTCGGGTATTCACGT TTGTAGCCGAATATCGCTCTGCTACTTATTAGAATAACATGTCAGCGTTG TCGTTTCGATGTTTGTTGGGGGTTCCGTGTCTCGCTATGGTCGTGACCTT TTTTAGGCCTTTCGGCCTGCTCTCTGTCCGCACCAGGCGGTGTTAGTGAT CGCTAGAATGTAGGGCGTGTCGCGTTTCGTCACGTTCTCAACGCGGCACT GTTGCCATGCTTTACGGCTTTCGGCGTGCTGCGCTCGCTGGTAGTGGTGG CGCAGAGGGATGGGTGTTGGTGCTTGGTTCATTTCTTTTTTTTCTTCTTT TTTTTTCTTTTTTTTTCTTATTTCATTACCTGGAAACAGCGGAGCACAAC TCGAGCCAATCAGGTGACCGTGGTCGTGTCTATCGTGCCGTGCCTGCCTG TGTTTAACGCGAGAGAGCTCGAGACCAAAACATCGGAGAAGGACCCCCTT AATGACGGACTGAATTATTTTTGTCGAGTTGGGAATACGAGCCCCGTTGG AACGATGATGCCCATGCTGACTGCTGTAAGGTGACACACCTCTTGCACGA CAGCTCTTTAGCAGTCTGCGTTTTTTCACCGCAAAAAGTGAGTCCTTTTT TTTTGCTATTTCAGTGCGCATTCTTGTCTTTTTCGGAGTATGGCGTGTTC TCAAACCGATGTTTGATGCTGCTCCCCCCCTCCCCCCCCCATGACGTTTA ATCTTTAGCTATGCTCGGAGGAACTCAACTTGCCGGAACGCGCTCGAGAG TACTACCAAAGGGGGCTCCGTGCATGCCCTGGGTCTATCCCCCTGTGGCG GCTCGCGGCACGGCTGGAAGAGCGCACCGTAGGGGTTAACAAGGCCAGGC CTATGCTTGAGGTCGCGAGGTAAGGGTGATGTGTTGTTGTTGTTGTTGTT GTTGTTGTTGTTGTTGTTGTTCTTGGCTGAGGCTGAAAGGTGATGTGAGT TAAGCGACAGTTCAGCTGTTGCCACCGAAGGACAAGGAGAAATCGTTCAT TAGAACACAATCTTTTCACCAAAAGTGGAGTCGCCGCCCTGATAGTCGTA CATGTAGGGATGGCTCAAGCGCACGTGCGCGCACGGGATGCCACCTGTTT CGCGTTGAAATGGAGGCGGCGACAAAGGGTCTTCTTGTTGTCCATGCCTC GAGAGCAAGCCTCATACCCATTACGTATCCGCAGTAGCCGCCCACGCCCA ATATTGTTTTTTCGTTCCTTATGTAAAAGTTCTAAAATCCCAACCACGGC AACAGCCATCAACAACCCCAAAATATTTTCTCGCGCCATAGGCTGAGAAA TCCATATCACCGCAACAGCCACCAACACACCCCTATGATTTCGAGTACCA TACGTACCAATCAAGAAATCCTGAGTCACCCCAACAGCCACCAGTACACT CGCATAAATTCTTGTACCGTAACTTGAGCAGCATCAACAGTCCCCGATTT CCTGCATCATTGGATGAACAGCCACCACCACACCTCGACACTTACTCGCA CGATGCGTAGGTTTAGAAATCCCAACCACCGCAAAAACCACCTGCACGCC CCAATGTTTACTTGTATCAACAACCACCACCGCAACAAGCCACCAACACC CCCCGATAATTTCTTGTGCCATAACTCAGGTTGAGAAACCCGAAGAGTGA GGGTCTATGGTTGGAGGCGGTCCGGCTGGAGAGGCGAGCGGGGAACAACA AGGGCGCGGATAGCCTCATGGCCAAGGCGCTGCAGGAGTGTCCCGGTTCC GGCGTGCTTTGGGCGGAGGAGATCTTGGTGGCACAACGAGCCGAGCAGAA AAGTGAGAGATGGCCTAGGCGCAGAAATAATGTTTCTTCTATGACATATT AGTCAAAGAGGGAGGGCTTACGTAGATCCTAACCAGAACCCACGAAATTC CACCTTTCCTAGACTTTACCCGATATGTTTGTTCGGTGGAAAGATAGGGA GGGGTGGCGTGGCGAAGTTCCACCTGTGCTGCAACTCTTCATCCAATATA TGCGTTTGCTGAGTACAAACCTGCGTAGGCTATGTACTGAAAGTGAGAGA GACCGCGATGCGAGAAGCAGGAGCAAGGGTAGCCGTGGCGTGACGTCACG TCCGTAGCGTGTTGTGTTGGTATTGGTAGGCATCGCTGTGTAGCAGTCTT CGCGTCCGCAAGCGTGTTGTATGGTAGGTATTGCTGTGGACCTAATCACA ATGTGGGTGTTGCTGTTAAGTGTTGGTAGGAGGGGAATGCTGTTGGGAAG ATGGCACAGCAGGCTGAGCCGGCAAACAGATTTAGTGGTTGGGTTGTTCC TGCTACCATGATTGCCATCGTTTCACTCCGTAGGCGGTTCACCACGACCT TGCCTACCCGGTTGGACAAGAAATGACAACACCACCAACACCGTTCTAAC CGAACAGGCAAATCCCTGGAGGCGCTCAAGCGGTGCGACAACGACCCGCA CGTCATCACCGCCGTGGCCAGGCGCTTCTGGGCGGACCGCAAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig14821:380..4322+

>mRNA_Ecto-sp13_S_contig14821.3678.1 ID=mRNA_Ecto-sp13_S_contig14821.3678.1|Name=mRNA_Ecto-sp13_S_contig14821.3678.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=960bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14821:380..4322+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGATGATGCGGAGAACTCCCTTAACCGCGGAGGTGTGGAGACGGCGCG
GGCGATCTACGCCCATGCCTTGGGCCACTTCAGGTCCAAGAAGGGCGTGT
GGATGCGGGCCTGCGCTCTTGAGAAGAAGCACGGCACTGCAGAGTCGCTG
GAGCAGGCAAGAGGACCGACGCAGATGTTGAAGAAGGCCGTGACTCACTG
TCCCCGTGCGGAGATGCTGTGGCTCATGGCGGCGAAGGAGAAGTGGCTCA
GCAACGACGTCGACGGGGCGAGGACCATCCTCAAGGAGGCTTTCCTTGCA
AACCCTGACAGCGAGCAGGTGTGGCTGGCTGCGGTGAAGCTGGAGTGGGA
GAACAACGCCTTTGAGCGAGCCCGCATCCTGCTCAAGAAGGCGTGCGACC
GCGCCCCCACGGCGCTAGTGTGGATGAAAGCCGCCCTGCTAGAGAGGGAG
CTCAAGGCGCCCGAGGCGGCGCTGAAGCTGATCGACACAGCGCTGCCGTC
CTACCCCACTTTCGCCAAGCTCTACATGATGGCGGGACAGCTATGCTCGG
AGGAACTCAACTTGCCGGAACGCGCTCGAGAGTACTACCAAAGGGGGCTC
CGTGCATGCCCTGGGTCTATCCCCCTGTGGCGGCTCGCGGCACGGCTGGA
AGAGCGCACCGTAGGGGTTAACAAGGCCAGGCCTATGCTTGAGGTCGCGA
GGTTGAGAAACCCGAAGAGTGAGGGTCTATGGTTGGAGGCGGTCCGGCTG
GAGAGGCGAGCGGGGAACAACAAGGGCGCGGATAGCCTCATGGCCAAGGC
GCTGCAGGAGTGTCCCGGTTCCGGCGTGCTTTGGGCGGAGGAGATCTTGG
TGGCACAACGAGCCGAGCAGAAAAGCAAATCCCTGGAGGCGCTCAAGCGG
TGCGACAACGACCCGCACGTCATCACCGCCGTGGCCAGGCGCTTCTGGGC
GGACCGCAAG
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