mRNA_Ecto-sp13_S_contig148.3662.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig148.3662.1 vs. uniprot
Match: D7FNM5_ECTSI (SET domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNM5_ECTSI) HSP 1 Score: 721 bits (1861), Expect = 2.590e-256 Identity = 390/444 (87.84%), Postives = 396/444 (89.19%), Query Frame = 3
Query: 261 MTWDVRLALALLEATSDPQVGGKFWHVYGRLLPQPHTVTVPFCLPERLLGQLHNSGMAERARKQVERVRCLYPDLMQTLLSHPKTAVYAARRTAEGEATVAAGEAATAAATKEAAEKETDAVPMALLWAFAMVRSRAFAADGDRFAFVPFLDMANHGFADPAANFTYISGGKSQPGVFQLQAMRSISAGEEVTISYGEQLNAEQLMVQYGFPAPPNVPLERPLCGSDALVRDTVAVAMKEGKETAGAATATAAAGEGVVGGGDAAGLPTAAAQEEGEERGSRGALSEAERVGLMNELFLRAQQRFAREAGGDELRFEIGARKVLPLVPPIATKIGELMGDGEDGMIKGAERYLEELQAYRSENFPSTEEQDRELLSYCLGNGRGKVDPRLADVVRYRLGRKEAHSTAAGILEEFTAPSPPALSTPPA---GDATDPPQEAQEEE 1583
MTWDVRLALALLEATSDPQVGGKFWHVYGRLLPQPHTVTVPFCLPERLLGQLHNSGMAERARKQVERVR LYPDLM+TLLSHPKTAVYA R+TAEGEA AAGE ATAAATKEAAEKETDAVPMALLWAFAMVRSRAFAADGDRFAFVPFLDMANHGFADPAANFTYISGG+SQPGVFQLQAMR+ISAGEEVTISYGEQLNAEQLMVQYGFPAPPNVPLE PLCGSDALVRDTVAVA +E KETAGAATATA V RGSRGALSEAERVGLMNELFLRAQQRFAREAGGDE RFEIG RKVLPLVPPIATKIGELMGDGEDGMIKGAE YLEELQAYRSENFPSTEEQDRELLSYCLGNGRGKVDPRLADVVRYRLGRKEAHSTAAGILEEFTAP+P GDAT PPQEAQEEE
Sbjct: 1 MTWDVRLALALLEATSDPQVGGKFWHVYGRLLPQPHTVTVPFCLPERLLGQLHNSGMAERARKQVERVRSLYPDLMRTLLSHPKTAVYATRKTAEGEAAAAAGETATAAATKEAAEKETDAVPMALLWAFAMVRSRAFAADGDRFAFVPFLDMANHGFADPAANFTYISGGESQPGVFQLQAMRNISAGEEVTISYGEQLNAEQLMVQYGFPAPPNVPLELPLCGSDALVRDTVAVATEEVKETAGAATATAXXXXXVXXXXXXXXXXXXXXXXXXXXRGSRGALSEAERVGLMNELFLRAQQRFAREAGGDERRFEIGVRKVLPLVPPIATKIGELMGDGEDGMIKGAELYLEELQAYRSENFPSTEEQDRELLSYCLGNGRGKVDPRLADVVRYRLGRKEAHSTAAGILEEFTAPAPXXXXXXXXXXXGDATAPPQEAQEEE 444
BLAST of mRNA_Ecto-sp13_S_contig148.3662.1 vs. uniprot
Match: A0A835YIR1_9STRA (SET domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIR1_9STRA) HSP 1 Score: 229 bits (584), Expect = 3.600e-65 Identity = 120/239 (50.21%), Postives = 157/239 (65.69%), Query Frame = 3
Query: 177 GLYGQTDLCWEAAGDLRDPVSDEDFARGMTWDVRLALALLEATSDPQVGGKFWHVYGRLLPQPHTVTVPFCLPERLLGQLHNSGMAERARKQVERVRCLYPDLMQTLLSHPKTAVYAARRTAEGEATVAAGEAATAAATKEAAEKETDAVPMALLWAFAMVRSRAFAADGDRFAFVPFLDMANHGFADPAANFTYISGGKSQPGVFQLQAMRSISAGEEVTISYGEQLNAEQLMVQYGF 893
GL GQTDLCW+ AGDLRDPV D +A+G+TWDVRLALAL +AT+D VGG+FW +YGRLLP PH VTVP CLP LL ++ ++ +A RA+ Q +R+ L+P +MQT ++HP+TA Y+A ++P AL WAFA+VRSRAF+A D+FAFVPFLDMANH ++P ANFT+ S G F+L A+ + A +V ISYG+ L+ +L QYGF
Sbjct: 29 GLQGQTDLCWDQAGDLRDPVDDTSYAKGLTWDVRLALALQDATADIAVGGQFWDLYGRLLPAPHEVTVPLCLPSALLKEMQHAQLARRAQAQKDRLSGLFPLMMQTHMAHPRTACYSAL-----------------------GPGVLQSLPFALQWAFALVRSRAFSAGNDQFAFVPFLDMANHN-SNPNANFTF----DSAIGSFKLTALTDVKADSQVYISYGQALDDGKLATQYGF 239
BLAST of mRNA_Ecto-sp13_S_contig148.3662.1 vs. uniprot
Match: A0A7S4D535_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D535_HETAK) HSP 1 Score: 182 bits (461), Expect = 1.620e-46 Identity = 102/240 (42.50%), Postives = 140/240 (58.33%), Query Frame = 3
Query: 174 QGLYGQTDLCWEAAGDLRDPVSDEDFARGMTWDVRLALALLEATSDPQVGGKFWHVYGRLLPQPHTVTVPFCLPERLLGQLHNSGMAERARKQVERVRCLYPDLMQTLLSHPKTAVYAARRTAEGEATVAAGEAATAAATKEAAEKETDAVPMALLWAFAMVRSRAFAADGDRFAFVPFLDMANHGFADPAANFTYISGGKSQPGVFQLQAMRSISAGEEVTISYGEQLNAEQLMVQYGF 893
+GL GQ+D+ W AGDLR D A+G+TWD+RLA+ALLEA S+ + G FW VYG +LP PHTVT+P C P+ L ++ N M + A +Q R+ YP L++ HPK +Y T +VP AL+W FA+VRSR F+A +RFAFVPFLDM NH + P A+++Y S F L A++ I +G+E+ ISYG+ L+ + LMV+YGF
Sbjct: 136 RGLDGQSDMTWAVAGDLRADYPDLLRAQGLTWDLRLAVALLEAASEQRCAGGFWDVYGFMLPAPHTVTMPLCFPQELTAEVQNPFMMKAAGQQQVRLESHYPTLVKPNY-HPKLKIYQDLGM-------------------------TSSVPNALMWCFALVRSRCFSASPERFAFVPFLDMCNH-WVKPNADYSYNEATDS----FDLVALKPIRSGDEILISYGQGLSNDDLMVRYGF 344
BLAST of mRNA_Ecto-sp13_S_contig148.3662.1 vs. uniprot
Match: R1CZ63_EMIHU (SET domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1CZ63_EMIHU) HSP 1 Score: 173 bits (439), Expect = 5.810e-44 Identity = 118/271 (43.54%), Postives = 147/271 (54.24%), Query Frame = 3
Query: 177 GLYGQTDLCWEAAGDLRDPVSDEDFARGMTWDVRLALALLEATSDPQVGGKFWHVYGRLLPQPHTVTVPFCLPERLLGQLHNSGMAERARKQVERVRCLYPDLMQTLLSHPKTAVYAARRTAEGEATVAAGEAATAAATKEAAEKETDAVPMALLWAFAMVRSRAFA-ADGDRFAFVPFLDMANHGFADPAANFTYISGGKSQPGVFQLQAMRSISAGEEVTISYGEQLNAEQLMVQYGFPAPPNVPLERPLCGSDA-LVRDTVAVAMKEG 983
GL GQTDL W+AAGDLR+ V + F RG TWDVRLALA+LEAT+ GG+ W Y R LP PH ++ P CLP LL +L +A A + E + LY LM +HP TA Y AR GEAA VP L WA+A+V SR FA + GD F FVPFLDM H A P+ANFT + G+ L+ +R ++AGEEVTISYG ++ + QYGF C +DA L+ + VA A G
Sbjct: 111 GLAGQTDLVWDAAGDLREEVGEAMFKRGATWDVRLALAVLEATAG--CGGELWDAYRRFLPLPHELSSPVCLPAELLAELREPAVASAAAARNELLADLYAPLMAHE-AHPATAGYVAR----------GGEAA------------RGLVPAPLSWAYALVSSRCFALSGGDTFGFVPFLDMCQHS-AVPSANFT-----SDERGIV-LRTLRPVAAGEEVTISYGGDYSSRRTFEQYGFVLSEG-------CAADATLLEEAVAAAAAAG 342
BLAST of mRNA_Ecto-sp13_S_contig148.3662.1 vs. uniprot
Match: A0A0M0JQY2_9EUKA (Ribulose-bisphosphate carboxylase oxygenase large subunit n-chloroplast n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JQY2_9EUKA) HSP 1 Score: 159 bits (402), Expect = 1.320e-38 Identity = 114/272 (41.91%), Postives = 149/272 (54.78%), Query Frame = 3
Query: 177 GLYGQTDLCWEAAGDLRDPVSDEDFARGMTWDVRLALALLEATSDPQVGGKFWHVYGRLLPQPHTVTVPFCLPERLLGQLHNSGMAERARKQVERVRCLYPDLMQTL---LSHPKTAVYAARRTAEGEATVAAGEAATAAATKEAAEKETDAVPMALLWAFAMVRSRAFA-ADGDRFAFVPFLDMANHGFAD-PAANFTYISGGKSQPGVFQLQAMRSISAGEEVTISYGEQLNAEQLMVQYGFPAPPNVPLERPLCGSDA-LVRDTVAVAM 974
GL GQT++ WEAAGDLR+ V +E F RG TWDVRLALA+ EAT+ G FW Y +L+P P ++T P CLP+ +L +L N + + +V+ R L+ DL +L +HP TA Y R + +P L +A+A+V SR FA ADGD FAFVPFLDMA H AD P ANF +Q G L A+ + GEEVTI+Y ++EQL QYGF VP + C DA L+R T+ A+
Sbjct: 107 GLQGQTEVMWEAAGDLREEVGEELFQRGATWDVRLALAVYEATAGG--AGGFWDDYRKLMPPPPSMTHPLCLPQAMLPELQNVEL----QAKVQAKRALFQDLHPSLHAHATHPVTASYTNRGF------------------------PMEYIPRPLPYAYALVVSRCFAMADGDTFAFVPFLDMAQH--ADVPTANFRV----DAQDGA-TLTALADLKPGEEVTINYDPDYSSEQLFAQYGF-----VPSDG--CAKDAKLLRATLGAAI 334
BLAST of mRNA_Ecto-sp13_S_contig148.3662.1 vs. uniprot
Match: A0A7S0NTJ5_9EUKA (Hypothetical protein n=2 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0NTJ5_9EUKA) HSP 1 Score: 152 bits (385), Expect = 1.430e-36 Identity = 103/241 (42.74%), Postives = 129/241 (53.53%), Query Frame = 3
Query: 177 GLYGQTDLCWEAAGDLRDPVSDEDFARGMTWDVRLALALLEATSDPQVGGKFWHVYGRLLPQPHTVTVPFCLPERLLGQLHNSGMAERARKQVERVRCLYPDLMQTLLSHPKTAVYAARRTAEGEATVAAGEAATAAATKEAAEKETDAVPMALLWAFAMVRSRAFA-ADGDRFAFVPFLDMANHGFADPAANFTYISGGKSQPGVFQLQAMRSISAGEEVTISY-GEQLNAEQLMVQYGF 893
GL GQTD +AAGDLRD V +E F +G TWDVRLALA+ EAT+ GG FW Y RLLP P T LP LL +L + + +R + +R LYP L T HP T+ YAA + + VP+ L W +++V SR FA AD D FAFVPFLDM H A P+ANFT S G F L +R + AGE VTISY G+ ++ ++ YGF
Sbjct: 71 GLIGQTDAMVDAAGDLRDEVGEEAFNQGATWDVRLALAVFEATAG--CGGPFWDEYRRLLPLPPFATAAASLPPVLLEELQDPVLQKRGLAKDALLRELYPSLA-THSVHPVTSSYAAM------------------------DAPLELVPLPLQWTYSLVVSRCFAMADEDTFAFVPFLDMCQHS-ASPSANFT------SSDGDFVLSTLRRMQAGEAVTISYDGDAYDSRRMFELYGF 277
BLAST of mRNA_Ecto-sp13_S_contig148.3662.1 vs. uniprot
Match: A0A7S4F9T8_CHRCT (Hypothetical protein (Fragment) n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4F9T8_CHRCT) HSP 1 Score: 151 bits (382), Expect = 1.750e-36 Identity = 111/295 (37.63%), Postives = 147/295 (49.83%), Query Frame = 3
Query: 45 WNVPFPNQEQGVESGGSQQRRRLLIASCRIRQ--------RPVTCTSFHG*--QGLYGQTDLCWEAAGDLRDPVSDEDFARGMTWDVRLALALLEATSDPQVGGKFWHVYGRLLPQPHTVTVPFCLPERLLGQLHNSGMAERARKQVERVRCLYPDLMQTLLSHPKTAVYAARRTAEGEATVAAGEAATAAATKEAAEKETDAVPMALLWAFAMVRSRAFA-ADGDRFAFVPFLDMANHGFADPAANFTYISGGKSQPGVFQLQAMRSISAGEEVTISY-GEQLNAEQLMVQYGF 893
+N+ E V GG R L A Q R + T+ GL GQTD+ +AAGDLR V ++ F RG TWDVRLALA+ EAT+ GG FW Y +LLP P LPE L+ +L + + +RA+++ + LYP L Q +HP TA+Y + G + +P L W +MV SR F+ AD D FAFVPFLDM H A P ANF+ +SG F+L A+R I AGEE+TISY G + + ++ YGF
Sbjct: 109 YNILPSGSESVVLRGGRGDDSRGLFAGKSFEQGEVLVRVPRDLLLTAHRSGVVSGLIGQTDVMLDAAGDLRSEVGEKMFERGATWDVRLALAVFEATAG--CGGPFWDRYRQLLPLPPFSMSAASLPEFLIDELQDPVLEQRAKQKASMLVSLYPALSQHA-AHPATAMY-----------IRMG-------------APLEMIPSPLAWCHSMVVSRCFSMADVDTFAFVPFLDMCQHAEA-PTANFSSVSGD------FELTALRPIEAGEEITISYDGNEYASRRMFELYGF 369
BLAST of mRNA_Ecto-sp13_S_contig148.3662.1 vs. uniprot
Match: A0A7S1NQL8_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1NQL8_9EUGL) HSP 1 Score: 118 bits (295), Expect = 2.260e-26 Identity = 87/239 (36.40%), Postives = 111/239 (46.44%), Query Frame = 3
Query: 246 DFARGMTWDVRLALALLEATSDPQVGGKFWHVYGRLLPQPHTVTVPFCLPERLLGQLHNSGMAERARKQVERVRCLYPDLMQTLLSHPKTAVYAARRTAEGEATVAAGEAATAAATKEAAEKETDAVPMALLWAFAMVRSRAFAADGDRFAFVPFLDMANHGFADPAANFTYISGGKSQPGVFQLQAMRSISAGEEVTISYGEQLNAEQLMVQYGFPAPPNVPLERPLCGSDALVRDTV 962
D TWD+RLA+ LLEA FW YG L+ T+ P L +LL +L + MA+ A +Q +R+R L+PD++ VYA + P L+W +A+VRSR F A FAFVPFLDMANH P A+F Y Q F L+A+R I EEVTISYG + +L QYGF P P + L G D L D V
Sbjct: 8 DIPADFTWDIRLAIKLLEAIDGRW--SPFWASYGELMQPYLTMANPMLLYPQLLVELQHEDMADAAVQQQQRLRDLFPDMVP--------GVYA----------------------------PAEEFPSPLMWTWALVRSRCFTAGEQAFAFVPFLDMANH-LEIPNADFEYAP----QDSCFYLRAVRQIRQNEEVTISYGAAYDNRRLFAQYGFVEPGGNPYDT-LPGMDGLPSDLV 202
BLAST of mRNA_Ecto-sp13_S_contig148.3662.1 vs. uniprot
Match: A0A7S3SFS5_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3SFS5_9SPIT) HSP 1 Score: 115 bits (288), Expect = 6.010e-26 Identity = 83/212 (39.15%), Postives = 106/212 (50.00%), Query Frame = 3
Query: 264 TWDVRLALALLEATSDPQVGGKFWHVYGRLLPQPHTVTVPFCLPERLLGQLHNSGMAERARKQVERVRCLYPDLMQTLLSHPKTAVYAARRTAEGEATVAAGEAATAAATKEAAEKETDAVPMALLWAFAMVRSRAFAA-DGDRFAFVPFLDMANHGFADPAANFTYISGGKSQPGVFQLQAMRSISAGEEVTISY-GEQLNAEQLMVQYGF 893
TWDVRLALA++EAT+ GG FW Y +LLP P V+ CLP + L ++ + ++A R+R LYP L TL +HP T Y R E+ +P L W A+V SR F+ D D FAF PFLDMANH P ANFT G L A+R +SAG+EVTI Y G ++ + YGF
Sbjct: 2 TWDVRLALAVMEATAG--AGGPFWDGYRQLLPLPPHVSNAACLPVGFIPMLCDAVLEKQAHDTRARLRKLYPTL-HTLSAHPATGFYEQRF----------------------GEEAVGYIPSPLDWCHALVVSRCFSTVDEDTFAFTPFLDMANHA-ETPTANFT-----TGPDGSMHLYALRDMSAGDEVTICYDGGSYSSRRFFELYGF 182
BLAST of mRNA_Ecto-sp13_S_contig148.3662.1 vs. uniprot
Match: A0A7S2MSJ8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MSJ8_9STRA) HSP 1 Score: 113 bits (282), Expect = 5.240e-23 Identity = 97/282 (34.40%), Postives = 127/282 (45.04%), Query Frame = 3
Query: 72 QGVESGGSQQRRRLLIASC--RIRQRPVTCTSFHG*-QGLYGQTDLCWEAAGDLRDPVSDEDFARGMTWDVRLALALLEATSDPQVG--GKFWHVYGRLLPQPHTVT-VPFCLPERLLGQLHNSGMAERARKQVERVRCLYPDLMQTLLSHPKTAVYAARRTAEGEATVAAGEAATAAATKEAAEKETDAVPMALLWAFAMVRSRAFAA--DGDRFAFVPFLDMANHGFADPAANFTYISGGKSQPGVFQLQAMRSISAGEEVTISYGEQLNAEQLMVQYGF 893
+GV S G R L I + C G GL GQTDL E AGDLR+ + + + R +TWD+RLAL LLEATS +G G+ W Y LLP H +P LP LL +L + + RA + ++ + P+ HP A + P L WA A V SR+F D D FAFVPF D+ANH P NFT ++ F L+A++ I AGEEVTI YG + ++ YGF
Sbjct: 58 KGVSSRGLIANRDLRIGETVLAVPIEACLCVQRRGSVSGLQGQTDLTMEVAGDLREELPGDAW-RTITWDIRLALGLLEATSGNNLGTPGELWDGYFHLLPPLHRGPHIPLVLPPALLPELQDLELTRRAERMSALLQDILPECTDPFC-HPAGA--------------------------NGGPPRMQSSP--LHWALAQVWSRSFTCGDDIDSFAFVPFFDLANHKDI-PNTNFTTEIHPEAGVECFVLKALQDIGAGEEVTICYGSH-DPARMFELYGF 307 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig148.3662.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig148.3662.1 >prot_Ecto-sp13_S_contig148.3662.1 ID=prot_Ecto-sp13_S_contig148.3662.1|Name=mRNA_Ecto-sp13_S_contig148.3662.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=442bp MTWDVRLALALLEATSDPQVGGKFWHVYGRLLPQPHTVTVPFCLPERLLGback to top mRNA from alignment at Ecto-sp13_S_contig148:31340..35461- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig148.3662.1 ID=mRNA_Ecto-sp13_S_contig148.3662.1|Name=mRNA_Ecto-sp13_S_contig148.3662.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4122bp|location=Sequence derived from alignment at Ecto-sp13_S_contig148:31340..35461- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig148:31340..35461- >mRNA_Ecto-sp13_S_contig148.3662.1 ID=mRNA_Ecto-sp13_S_contig148.3662.1|Name=mRNA_Ecto-sp13_S_contig148.3662.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1326bp|location=Sequence derived from alignment at Ecto-sp13_S_contig148:31340..35461- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |