mRNA_Ecto-sp13_S_contig1475.3631.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1475.3631.1 vs. uniprot
Match: D8LK03_ECTSI (Putative: similar to centrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK03_ECTSI) HSP 1 Score: 304 bits (779), Expect = 1.420e-102 Identity = 175/247 (70.85%), Postives = 175/247 (70.85%), Query Frame = 1
Query: 10 RQGRGRGGAAGGRGKQTLDEESMEEIKEAFSLFDTEGKGAIDIRELKAAFRALGFQVKKQEIRGMLTDVDKEGAASVSFNDFVEMVTPKVLARDPKDEIMKIFALFDEDGTGGISFRNLKRVATELGENLTDDELQASFGLRIFSFAGHRDSCRSVPIVVRFVRSFFFAL*PCRRRRGHRIAGGRANIHRLFSTCFRRRPC*CVPVVQEMIDEADRDQDGVVNADEFYRVMRKREDPLDDLDSDDEY 750
RQGRGRGGAAGGRGKQTLDEESMEEIKEAFSLFDTEGKGAIDIRELKAAFRALGFQVKKQEIRGMLTDVDKEGAASVSFNDFVEMVTPKVLARDPKDEIMKIFALFDEDGTGGISFRNLKRVATELGENLTDDELQ EMIDEADRDQDGVVNADEFYRVMRKREDPLDDLDSDDEY
Sbjct: 8 RQGRGRGGAAGGRGKQTLDEESMEEIKEAFSLFDTEGKGAIDIRELKAAFRALGFQVKKQEIRGMLTDVDKEGAASVSFNDFVEMVTPKVLARDPKDEIMKIFALFDEDGTGGISFRNLKRVATELGENLTDDELQ------------------------------------------------------------------------EMIDEADRDQDGVVNADEFYRVMRKREDPLDDLDSDDEY 182
BLAST of mRNA_Ecto-sp13_S_contig1475.3631.1 vs. uniprot
Match: A0A6H5K0C1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0C1_9PHAE) HSP 1 Score: 249 bits (637), Expect = 3.470e-80 Identity = 129/130 (99.23%), Postives = 130/130 (100.00%), Query Frame = 1
Query: 31 GAAGGRGKQTLDEESMEEIKEAFSLFDTEGKGAIDIRELKAAFRALGFQVKKQEIRGMLTDVDKEGAASVSFNDFVEMVTPKVLARDPKDEIMKIFALFDEDGTGGISFRNLKRVATELGENLTDDELQA 420
GAAGGRGKQTLDEESMEEIKEAFSLFDTEGKGAIDIRELKAAFRALGFQVKKQEIRGMLTDVDKEGAASVSFNDFVEMVTPKVLARDPK+EIMKIFALFDEDGTGGISFRNLKRVATELGENLTDDELQA
Sbjct: 25 GAAGGRGKQTLDEESMEEIKEAFSLFDTEGKGAIDIRELKAAFRALGFQVKKQEIRGMLTDVDKEGAASVSFNDFVEMVTPKVLARDPKEEIMKIFALFDEDGTGGISFRNLKRVATELGENLTDDELQA 154
BLAST of mRNA_Ecto-sp13_S_contig1475.3631.1 vs. uniprot
Match: A0A6V1NRV6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NRV6_HETAK) HSP 1 Score: 230 bits (587), Expect = 2.310e-73 Identity = 130/233 (55.79%), Postives = 148/233 (63.52%), Query Frame = 1
Query: 52 KQTLDEESMEEIKEAFSLFDTEGKGAIDIRELKAAFRALGFQVKKQEIRGMLTDVDKEGAASVSFNDFVEMVTPKVLARDPKDEIMKIFALFDEDGTGGISFRNLKRVATELGENLTDDELQASFGLRIFSFAGHRDSCRSVPIVVRFVRSFFFAL*PCRRRRGHRIAGGRANIHRLFSTCFRRRPC*CVPVVQEMIDEADRDQDGVVNADEFYRVMRKREDPLDDLDSDDEY 750
KQ LD+E+MEEIKEAF+LFDTEGKG ID+RELKAAFRALGFQVKK E+R ML ++DKE AA+V FN+FVE VTPK+L RD ++EIMK+F LFDEDG+GGISFRNLKRVA ELGENLTD+ELQ EMI+EADRD DGVVNADEFYRVMRKREDPLDDLDSDD++
Sbjct: 24 KQGLDDEAMEEIKEAFNLFDTEGKGIIDVRELKAAFRALGFQVKKAELRTMLQEIDKESAATVEFNEFVEFVTPKMLNRDTREEIMKVFQLFDEDGSGGISFRNLKRVANELGENLTDEELQ------------------------------------------------------------------------EMIEEADRDNDGVVNADEFYRVMRKREDPLDDLDSDDDF 184
BLAST of mRNA_Ecto-sp13_S_contig1475.3631.1 vs. uniprot
Match: A0A812WEV1_SYMMI (Calmodulin n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812WEV1_SYMMI) HSP 1 Score: 213 bits (542), Expect = 1.590e-66 Identity = 119/234 (50.85%), Postives = 147/234 (62.82%), Query Frame = 1
Query: 52 KQTLDEESMEEIKEAFSLFDTEGKGAIDIRELKAAFRALGFQVKKQEIRGMLTDVDKE-GAASVSFNDFVEMVTPKVLARDPKDEIMKIFALFDEDGTGGISFRNLKRVATELGENLTDDELQASFGLRIFSFAGHRDSCRSVPIVVRFVRSFFFAL*PCRRRRGHRIAGGRANIHRLFSTCFRRRPC*CVPVVQEMIDEADRDQDGVVNADEFYRVMRKREDPLDDLDSDDEY 750
KQ LD+ESMEEI+EAF+LFDTEG+ ID+RELKAAFRALGFQVKK EIR M D+DK+ G+A+++F++FVEMVTP++L RD ++EIMK+FALFD+D TG ISF+NLKRVA ELGENLTDDELQ EM+DEADRD DGV+N +EFYRVMRKRE+PLD++DSDD++
Sbjct: 24 KQGLDDESMEEIREAFNLFDTEGRAVIDVRELKAAFRALGFQVKKAEIRQMFVDMDKDLGSATITFDEFVEMVTPRMLGRDSREEIMKVFALFDDDNTGAISFKNLKRVANELGENLTDDELQ------------------------------------------------------------------------EMVDEADRDGDGVINEEEFYRVMRKRENPLDEIDSDDDF 185
BLAST of mRNA_Ecto-sp13_S_contig1475.3631.1 vs. uniprot
Match: A0A7S2V0E0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V0E0_9STRA) HSP 1 Score: 210 bits (535), Expect = 2.450e-65 Identity = 124/251 (49.40%), Postives = 151/251 (60.16%), Query Frame = 1
Query: 1 SPSRQGRGRGGAAGGRGKQTLDEESMEEIKEAFSLFDTEGKGAIDIRELKAAFRALGFQVKKQEIRGMLTDVDKEGAA-SVSFNDFVEMVTPKVLARDPKDEIMKIFALFDEDGTGGISFRNLKRVATELGENLTDDELQASFGLRIFSFAGHRDSCRSVPIVVRFVRSFFFAL*PCRRRRGHRIAGGRANIHRLFSTCFRRRPC*CVPVVQEMIDEADRDQDGVVNADEFYRVMRKREDPLDDLDSDDEY 750
SP R GRGRG G LD+E++EE++EAF+LFDTEGKG IDIRELKAAFRALGF VKK +IR M+ + KE +++FN+FV+MVTP+++ RD ++EIMK+FALFDED TGGISFRNLKRVA ELGENLTDDELQ EM+DEADRD DGV+N +EFYRVMRKREDPLD++DSDD++
Sbjct: 22 SPRRGGRGRGKETG------LDDEAIEEVREAFNLFDTEGKGTIDIRELKAAFRALGFTVKKNDIREMMAHLGKESHEYNIAFNEFVQMVTPRMMNRDTREEIMKVFALFDEDQTGGISFRNLKRVAAELGENLTDDELQ------------------------------------------------------------------------EMVDEADRDGDGVINQEEFYRVMRKREDPLDEIDSDDDF 194
BLAST of mRNA_Ecto-sp13_S_contig1475.3631.1 vs. uniprot
Match: F0YQ62_AURAN (Uncharacterized protein n=2 Tax=Pelagomonadales TaxID=54409 RepID=F0YQ62_AURAN) HSP 1 Score: 199 bits (506), Expect = 5.840e-61 Identity = 117/230 (50.87%), Postives = 138/230 (60.00%), Query Frame = 1
Query: 61 LDEESMEEIKEAFSLFDTEGKGAIDIRELKAAFRALGFQVKKQEIRGMLTDVDKEGAASVSFNDFVEMVTPKVLARDPKDEIMKIFALFDEDGTGGISFRNLKRVATELGENLTDDELQASFGLRIFSFAGHRDSCRSVPIVVRFVRSFFFAL*PCRRRRGHRIAGGRANIHRLFSTCFRRRPC*CVPVVQEMIDEADRDQDGVVNADEFYRVMRKRED-PLDDLDSDDE 747
+ EE MEEI+EAF+LFDTEGKG IDI+ELKAAFRALGFQVKK EIR M+ DVDKE + +V F++FVEM TPK+ +RD ++EIMK+FALFD+D TG ISFRNLKRVA ELGENLTD+ELQ EMIDEADRD DG++N DEF+RVM+KR D PLDDL SDD+
Sbjct: 34 VSEEEMEEIREAFNLFDTEGKGVIDIKELKAAFRALGFQVKKAEIRRMMQDVDKESSPTVLFDEFVEMATPKMQSRDTREEIMKVFALFDDDQTGAISFRNLKRVANELGENLTDEELQ------------------------------------------------------------------------EMIDEADRDGDGMINEDEFFRVMKKRGDNPLDDLSSDDD 191
BLAST of mRNA_Ecto-sp13_S_contig1475.3631.1 vs. uniprot
Match: A0A067CJV4_SAPPC (Caltractin n=7 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CJV4_SAPPC) HSP 1 Score: 191 bits (486), Expect = 4.360e-58 Identity = 110/233 (47.21%), Postives = 137/233 (58.80%), Query Frame = 1
Query: 52 KQTLDEESMEEIKEAFSLFDTEGKGAIDIRELKAAFRALGFQVKKQEIRGMLTDVDKEGAASVSFNDFVEMVTPKVLARDPKDEIMKIFALFDEDGTGGISFRNLKRVATELGENLTDDELQASFGLRIFSFAGHRDSCRSVPIVVRFVRSFFFAL*PCRRRRGHRIAGGRANIHRLFSTCFRRRPC*CVPVVQEMIDEADRDQDGVVNADEFYRVMRKRE-DPLDDLDSDDE 747
K+ LDEE MEEIKEAFSLFDT+G G+ID RELKAA RALGFQVKK E+R M+ D+DK+ ++ F +FVEM+T ++ +RD +DE+MKIF LFD+D TG ISF+NLKRV +ELGENLTD+E+Q EMIDEADRD DG++N DEF+RVM+KR +PLDDLDSDD+
Sbjct: 22 KKALDEEQMEEIKEAFSLFDTDGSGSIDARELKAAMRALGFQVKKAEVRKMIADIDKDENGTIEFENFVEMMTSRMNSRDTRDEVMKIFKLFDDDNTGKISFKNLKRVCSELGENLTDEEMQ------------------------------------------------------------------------EMIDEADRDGDGLINEDEFFRVMKKRSGNPLDDLDSDDD 182
BLAST of mRNA_Ecto-sp13_S_contig1475.3631.1 vs. uniprot
Match: A0A7S2WQU2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WQU2_9STRA) HSP 1 Score: 190 bits (482), Expect = 3.010e-57 Identity = 116/238 (48.74%), Postives = 140/238 (58.82%), Query Frame = 1
Query: 43 GRGKQTLDEESMEEIKEAFSLFDTEGKGAIDIRELKAAFRALGFQVKKQEIRGMLTDVDKEGAASVSFNDFVEMVTPKVLARDPKDEIMKIFALFDEDGTGGISFRNLKRVATELGENLTDDELQASFGLRIFSFAGHRDSCRSVPIVVRFVRSFFFAL*PCRRRRGHRIAGGRANIHRLFSTCFRRRPC*CVPVVQEMIDEADRDQDGVVNADEFYRVMRKRED-PLDDLDSD-DEY 750
G+ K L EE MEE+KEAF LFDTE KG+ID++ELKAAFRALGFQVKK EIR M+TD+DK AA V +++FVEMVTPK+ +RD ++EI+K+F LFD+D T ISF+NL+RVA ELGENLTD+ELQ EM+DEADRD DGV+N +EFYRVM+KR D PLDDL SD DEY
Sbjct: 34 GQKKVGLSEEEMEEVKEAFQLFDTEQKGSIDVKELKAAFRALGFQVKKAEIRQMMTDIDKLDAAVVLYDEFVEMVTPKMQSRDTREEIIKVFKLFDDDQTNTISFKNLQRVARELGENLTDEELQ------------------------------------------------------------------------EMVDEADRDGDGVINEEEFYRVMKKRGDNPLDDLSSDEDEY 199
BLAST of mRNA_Ecto-sp13_S_contig1475.3631.1 vs. uniprot
Match: A0A485KQW7_9STRA (Aste57867_10397 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KQW7_9STRA) HSP 1 Score: 188 bits (477), Expect = 6.000e-57 Identity = 108/233 (46.35%), Postives = 136/233 (58.37%), Query Frame = 1
Query: 52 KQTLDEESMEEIKEAFSLFDTEGKGAIDIRELKAAFRALGFQVKKQEIRGMLTDVDKEGAASVSFNDFVEMVTPKVLARDPKDEIMKIFALFDEDGTGGISFRNLKRVATELGENLTDDELQASFGLRIFSFAGHRDSCRSVPIVVRFVRSFFFAL*PCRRRRGHRIAGGRANIHRLFSTCFRRRPC*CVPVVQEMIDEADRDQDGVVNADEFYRVMRKRE-DPLDDLDSDDE 747
+Q LD+E MEEIKEAFSLFDT+G G+ID RELKAA RALGFQVKK E+R M+ D+DK+ ++ F +FVEM+T ++ +RD K+E+ KIF LFD+D TG ISF+NLKRV TELGENLTD+E+Q EMIDEADRD DG++N +EF+RVM+KR +PLDDLDSDD+
Sbjct: 6 RQALDDEQMEEIKEAFSLFDTDGSGSIDARELKAAMRALGFQVKKAEVRKMIADIDKDENCTIEFENFVEMMTSRMNSRDTKEEVSKIFKLFDDDNTGKISFKNLKRVCTELGENLTDEEMQ------------------------------------------------------------------------EMIDEADRDGDGLINEEEFFRVMKKRSGNPLDDLDSDDD 166
BLAST of mRNA_Ecto-sp13_S_contig1475.3631.1 vs. uniprot
Match: K3WUB8_GLOUD (Uncharacterized protein n=2 Tax=Pythiaceae TaxID=4782 RepID=K3WUB8_GLOUD) HSP 1 Score: 186 bits (473), Expect = 2.420e-56 Identity = 108/232 (46.55%), Postives = 135/232 (58.19%), Query Frame = 1
Query: 55 QTLDEESMEEIKEAFSLFDTEGKGAIDIRELKAAFRALGFQVKKQEIRGMLTDVDKEGAASVSFNDFVEMVTPKVLARDPKDEIMKIFALFDEDGTGGISFRNLKRVATELGENLTDDELQASFGLRIFSFAGHRDSCRSVPIVVRFVRSFFFAL*PCRRRRGHRIAGGRANIHRLFSTCFRRRPC*CVPVVQEMIDEADRDQDGVVNADEFYRVMRKRE-DPLDDLDSDDE 747
+ LD+E +EEIKEAF LFDT+G G ID+RELKAA RALGFQVKK EIR M+ D+DK+ + +++ ++F+EM+T K+ ARDP++EIMKIF LFD+D TG ISFRNLKRV ELGE LTD+E+Q EMIDEADRD DG +N DEF+RVM+KR +PLDDLDSDD+
Sbjct: 7 KALDDEDLEEIKEAFQLFDTDGSGFIDVRELKAAMRALGFQVKKAEIRQMIADIDKDESGTINQDEFIEMMTGKMNARDPREEIMKIFKLFDDDNTGKISFRNLKRVCAELGETLTDEEMQ------------------------------------------------------------------------EMIDEADRDGDGFINEDEFFRVMKKRSGNPLDDLDSDDD 166 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1475.3631.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1475.3631.1 >prot_Ecto-sp13_S_contig1475.3631.1 ID=prot_Ecto-sp13_S_contig1475.3631.1|Name=mRNA_Ecto-sp13_S_contig1475.3631.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=174bp SPSRQGRGRGGAAGGRGKQTLDEESMEEIKEAFSLFDTEGKGAIDIRELKback to top mRNA from alignment at Ecto-sp13_S_contig1475:9153..12547- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1475.3631.1 ID=mRNA_Ecto-sp13_S_contig1475.3631.1|Name=mRNA_Ecto-sp13_S_contig1475.3631.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3395bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1475:9153..12547- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1475:9153..12547- >mRNA_Ecto-sp13_S_contig1475.3631.1 ID=mRNA_Ecto-sp13_S_contig1475.3631.1|Name=mRNA_Ecto-sp13_S_contig1475.3631.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=522bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1475:9153..12547- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |