mRNA_Ecto-sp13_S_contig1475.3629.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1475.3629.1 vs. uniprot
Match: A0A6H5JGR4_9PHAE (Cation_ATPase_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGR4_9PHAE) HSP 1 Score: 385 bits (990), Expect = 1.200e-122 Identity = 207/215 (96.28%), Postives = 211/215 (98.14%), Query Frame = 1
Query: 7 IYAVSVFESESSTDMESLQLGLVLAVVILLNTLLDFTQRQNAEKVLKSFSKLCPSSSLVNRGGETLEVDSTELVMGDVVTLKAGDKIPADLRFIWCNGATVDNSSLTGESAPLKRTATARTDSSREAENMGFFGTTLVQGSALGVVIRTGDSTTMGQIAASAGVKRTIESPLTVEIEMFVKMTAVIATITGVIFFALGYLLVDSDFLDQFVFLVG 651
IYA +VFES+SSTDMESLQLGLVLAVVILLNTLLDFTQRQNAEKVLKSFSKLCPSSSLVNRGGETLEVDSTELVMGDVVTLKAGDKIPAD+RFIWCNGATVDNSSLTGESAPLKRTATARTD+SREAENMGFFGTTLVQGSALGVVIRTGDSTTMGQIAASAG KR IESPLTVEIEMFVKMTAVIATITGVIFF LGYLLVDSDFLDQFVFLVG
Sbjct: 244 IYAATVFESDSSTDMESLQLGLVLAVVILLNTLLDFTQRQNAEKVLKSFSKLCPSSSLVNRGGETLEVDSTELVMGDVVTLKAGDKIPADIRFIWCNGATVDNSSLTGESAPLKRTATARTDNSREAENMGFFGTTLVQGSALGVVIRTGDSTTMGQIAASAGAKRAIESPLTVEIEMFVKMTAVIATITGVIFFLLGYLLVDSDFLDQFVFLVG 458
BLAST of mRNA_Ecto-sp13_S_contig1475.3629.1 vs. uniprot
Match: D8LK05_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK05_ECTSI) HSP 1 Score: 380 bits (975), Expect = 1.820e-122 Identity = 203/212 (95.75%), Postives = 209/212 (98.58%), Query Frame = 1
Query: 16 VSVFESESSTDMESLQLGLVLAVVILLNTLLDFTQRQNAEKVLKSFSKLCPSSSLVNRGGETLEVDSTELVMGDVVTLKAGDKIPADLRFIWCNGATVDNSSLTGESAPLKRTATARTDSSREAENMGFFGTTLVQGSALGVVIRTGDSTTMGQIAASAGVKRTIESPLTVEIEMFVKMTAVIATITGVIFFALGYLLVDSDFLDQFVFLVG 651
+++FES+SSTDMESLQLGLVLAVVILLNTLLDFTQRQNAEKVLKSFSKLCPSSSLVNRGGETLE+DSTELVMGDVVTLKAGDKIPADLRFIWCN ATVDNSSLTGESAPLKRTATARTDSSREAENMGFFGTTLVQGSA+GVVIRTGDSTTMGQIAASAGVKR IESPLTVEIEMFVKMTAVIATITGVIFF LGYLLVDSDFLDQFVFLVG
Sbjct: 1 MTIFESDSSTDMESLQLGLVLAVVILLNTLLDFTQRQNAEKVLKSFSKLCPSSSLVNRGGETLEIDSTELVMGDVVTLKAGDKIPADLRFIWCNSATVDNSSLTGESAPLKRTATARTDSSREAENMGFFGTTLVQGSAVGVVIRTGDSTTMGQIAASAGVKRAIESPLTVEIEMFVKMTAVIATITGVIFFCLGYLLVDSDFLDQFVFLVG 212
BLAST of mRNA_Ecto-sp13_S_contig1475.3629.1 vs. uniprot
Match: A0A836CCV5_9STRA (Cation_ATPase_N domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCV5_9STRA) HSP 1 Score: 162 bits (411), Expect = 1.890e-42 Identity = 95/206 (46.12%), Postives = 133/206 (64.56%), Query Frame = 1
Query: 37 SSTDMESLQLGLVLAVVILLNTLLDFTQRQNAEKVLKSFSKLCPSSSLVNRGGETLEVDSTELVMGDVVTLKAGDKIPADLRFIWCNGATVDNSSLTGESAPLKRTATARTDSSREAENMGFFGTTLVQGSALGVVIRTGDSTTMGQIAASAGVKRTIE-SPLTVEIEMFVKMTAVIATITGVIFFALGYLLVDSDFLDQFVFLVG 651
S D + LG VL VV+L NT +DF Q + + +LKS S L P +L R G T++V + EL GDVV L+AGDK+PAD+R + C TVDNS+LTGE+ P KRT +A + + EAEN+ F GTT+V G +GVVIR GD++ +G+IA+ AG + E SPL +EI FV M A+ A +T +I FA+ + + +DF+ +G
Sbjct: 132 SPDDWTPIYLGSVLLVVVLANTTVDFVQARKSASMLKSLSNLAPPKALALRDGTTVDVPAQELARGDVVILRAGDKVPADVRLVGCTDMTVDNSNLTGENEPQKRTVSADSMAVLEAENLAFMGTTVVNGRGVGVVIRRGDASILGRIASLAGAPKEEELSPLALEIRSFVIMIALGAFLTAIILFAVS-MGMGNDFISSLSLFIG 336
BLAST of mRNA_Ecto-sp13_S_contig1475.3629.1 vs. uniprot
Match: A0A8J6GT72_MICOH (Sodium/potassium-transporting ATPase subunit alpha-4 n=1 Tax=Microtus ochrogaster TaxID=79684 RepID=A0A8J6GT72_MICOH) HSP 1 Score: 159 bits (401), Expect = 5.290e-42 Identity = 88/214 (41.12%), Postives = 134/214 (62.62%), Query Frame = 1
Query: 10 YAVSVFESESSTDMESLQLGLVLAVVILLNTLLDFTQRQNAEKVLKSFSKLCPSSSLVNRGGETLEVDSTELVMGDVVTLKAGDKIPADLRFIWCNGATVDNSSLTGESAPLKRTATARTDSSREAENMGFFGTTLVQGSALGVVIRTGDSTTMGQIAASAGVKRTIESPLTVEIEMFVKMTAVIATITGVIFFALGYLLVDSDFLDQFVFLVG 651
Y ++V SE S ++L LG+VLAVV+L+ + Q + K+++SF + P +LV RGGE ++++ ++V+GD+V +K GD+IPAD+R I G VDNSSLTGES P R ++ E N+ FF T V+G+A G+VI TGDST MG+IA+ T ++P+ EIE F+ + +A G+ FF+L L++ +LD +FL+G
Sbjct: 125 YGINVHYSEKSNK-DNLYLGIVLAVVVLITGCFSYYQEAKSSKIMESFKNMVPQQALVIRGGEKMQINVKDVVLGDLVEVKGGDQIPADIRVIAAQGCKVDNSSLTGESEPQSRCPECTHENPLETRNIIFFSTNCVEGTARGIVIATGDSTVMGRIASLTSGLATGQTPIAAEIEHFIHLITAVAVFLGITFFSLS-LILGYGWLDAVIFLIG 336
BLAST of mRNA_Ecto-sp13_S_contig1475.3629.1 vs. uniprot
Match: A0A1U7RKA2_MESAU (sodium/potassium-transporting ATPase subunit alpha-3-like n=1 Tax=Mesocricetus auratus TaxID=10036 RepID=A0A1U7RKA2_MESAU) HSP 1 Score: 150 bits (380), Expect = 6.380e-42 Identity = 82/198 (41.41%), Postives = 125/198 (63.13%), Query Frame = 1
Query: 58 LQLGLVLAVVILLNTLLDFTQRQNAEKVLKSFSKLCPSSSLVNRGGETLEVDSTELVMGDVVTLKAGDKIPADLRFIWCNGATVDNSSLTGESAPLKRTATARTDSSREAENMGFFGTTLVQGSALGVVIRTGDSTTMGQIAASAGVKRTIESPLTVEIEMFVKMTAVIATITGVIFFALGYLLVDSDFLDQFVFLVG 651
L LG+VLA V+++ + Q + K+++SF + P +LV R GE ++V++ E+V+GD+V +K GD++PADLR I +G VDNSSLTGES P R+ D+ E N+ FF T V+G+A GVV+ TGD T MG+IA A ++P+ +EIE F+++ +A GV FF L L++ +L+ +FL+G
Sbjct: 10 LYLGIVLAAVVIITGCFSYYQEAKSSKIMESFKNMVPQQALVIREGEKMQVNAEEVVVGDLVEIKGGDRVPADLRIISAHGCKVDNSSLTGESEPQTRSPDCTHDNPLETRNITFFSTNCVEGTARGVVVATGDRTVMGRIATLASGLEVGKTPIAIEIEHFIQLITGVAVFLGVSFFILS-LILGYSWLEAVIFLIG 206
BLAST of mRNA_Ecto-sp13_S_contig1475.3629.1 vs. uniprot
Match: E9PRA5_HUMAN (Sodium/potassium-transporting ATPase subunit alpha-4 n=3 Tax=Hominidae TaxID=9604 RepID=E9PRA5_HUMAN) HSP 1 Score: 157 bits (398), Expect = 6.940e-42 Identity = 86/214 (40.19%), Postives = 135/214 (63.08%), Query Frame = 1
Query: 10 YAVSVFESESSTDMESLQLGLVLAVVILLNTLLDFTQRQNAEKVLKSFSKLCPSSSLVNRGGETLEVDSTELVMGDVVTLKAGDKIPADLRFIWCNGATVDNSSLTGESAPLKRTATARTDSSREAENMGFFGTTLVQGSALGVVIRTGDSTTMGQIAASAGVKRTIESPLTVEIEMFVKMTAVIATITGVIFFALGYLLVDSDFLDQFVFLVG 651
Y++ ++ +E T ++L L +VL+VV+++ + Q + K+++SF + P +LV RGGE ++++ E+V+GD+V +K GD++PADLR I G VDNSSLTGES P R+ ++ E N+ FF T V+G+A G+VI TGDST MG+IA+ ++P+ EIE F+ + V+A GV FFAL LL+ +L+ +FL+G
Sbjct: 123 YSIQIYFNEEPTK-DNLYLSIVLSVVVIVTGCFSYYQEAKSSKIMESFKNMVPQQALVIRGGEKMQINVQEVVLGDLVEIKGGDRVPADLRLISAQGCKVDNSSLTGESEPQSRSPDFTHENPLETRNICFFSTNCVEGTARGIVIATGDSTVMGRIASLTSGLAVGQTPIAAEIEHFIHLITVVAVFLGVTFFALS-LLLGYGWLEAIIFLIG 334
BLAST of mRNA_Ecto-sp13_S_contig1475.3629.1 vs. uniprot
Match: A0A452T014_URSMA (ATPase Na+/K+ transporting subunit alpha 4 n=2 Tax=Ursus TaxID=9639 RepID=A0A452T014_URSMA) HSP 1 Score: 157 bits (396), Expect = 1.390e-41 Identity = 91/214 (42.52%), Postives = 133/214 (62.15%), Query Frame = 1
Query: 10 YAVSVFESESSTDMESLQLGLVLAVVILLNTLLDFTQRQNAEKVLKSFSKLCPSSSLVNRGGETLEVDSTELVMGDVVTLKAGDKIPADLRFIWCNGATVDNSSLTGESAPLKRTATARTDSSREAENMGFFGTTLVQGSALGVVIRTGDSTTMGQIAASAGVKRTIESPLTVEIEMFVKMTAVIATITGVIFFALGYLLVDSDFLDQFVFLVG 651
Y + + E ST ++L LG+VLAVV+++ + Q + K+++SF + P +LV RGGE +++ E+V+GDVV +K GD+IPADLR I G VDNSSLTGES P R+ +S E N+ FF T V+G+A GVVI TGDST MG+IA+ ++P+ VEIE F+++ +A GV FF L L++ +L+ +FL+G
Sbjct: 121 YGIQLHYKEESTK-DNLYLGIVLAVVVIVTGCFSYYQEAKSSKIMESFRNMVPQQALVIRGGEKMQIKVEEVVVGDVVEVKGGDRIPADLRLISSQGCKVDNSSLTGESEPQFRSPEFTHESPLETRNICFFSTNCVEGTARGVVIATGDSTVMGRIASLTSGLVVGKTPIAVEIEHFIRLITAVAVFLGVSFFGLS-LILGYGWLEAVIFLIG 332
BLAST of mRNA_Ecto-sp13_S_contig1475.3629.1 vs. uniprot
Match: A0A061HVE0_CRIGR (Sodium/potassium-transporting ATPase subunit alpha-2-like isoform 1 (Fragment) n=1 Tax=Cricetulus griseus TaxID=10029 RepID=A0A061HVE0_CRIGR) HSP 1 Score: 153 bits (386), Expect = 3.050e-41 Identity = 83/207 (40.10%), Postives = 129/207 (62.32%), Query Frame = 1
Query: 31 SESSTDMESLQLGLVLAVVILLNTLLDFTQRQNAEKVLKSFSKLCPSSSLVNRGGETLEVDSTELVMGDVVTLKAGDKIPADLRFIWCNGATVDNSSLTGESAPLKRTATARTDSSREAENMGFFGTTLVQGSALGVVIRTGDSTTMGQIAASAGVKRTIESPLTVEIEMFVKMTAVIATITGVIFFALGYLLVDSDFLDQFVFLVG 651
+E ++L LG+VLA V+++ + Q + K+++SF + P +LV R GE ++V++ E+V+GD+V +K GD++PADLR I +G VDNSSLTGES P R+ D+ E N+ FF T V+G+A GVV+ TGD T MG+IA A ++P+ +EIE F+++ +A GV FF L L++ +L+ +FL+G
Sbjct: 155 TEDDPSRDNLYLGIVLAAVVIITGCFSYYQEAKSSKIMESFKNMVPQQALVIREGEKMQVNAEEVVVGDLVEIKGGDRVPADLRIISAHGCKVDNSSLTGESEPQTRSPDCTHDNPLETRNITFFSTNCVEGTARGVVVATGDRTVMGRIATLASGLEVGKTPIAIEIEHFIQLITGVAVFLGVSFFILS-LILGYTWLEAVIFLIG 360
BLAST of mRNA_Ecto-sp13_S_contig1475.3629.1 vs. uniprot
Match: A0A8C2NGA3_CAPHI (Cation_ATPase_N domain-containing protein n=2 Tax=Capra hircus TaxID=9925 RepID=A0A8C2NGA3_CAPHI) HSP 1 Score: 155 bits (392), Expect = 3.180e-41 Identity = 85/214 (39.72%), Postives = 135/214 (63.08%), Query Frame = 1
Query: 10 YAVSVFESESSTDMESLQLGLVLAVVILLNTLLDFTQRQNAEKVLKSFSKLCPSSSLVNRGGETLEVDSTELVMGDVVTLKAGDKIPADLRFIWCNGATVDNSSLTGESAPLKRTATARTDSSREAENMGFFGTTLVQGSALGVVIRTGDSTTMGQIAASAGVKRTIESPLTVEIEMFVKMTAVIATITGVIFFALGYLLVDSDFLDQFVFLVG 651
+++ ++ SE +T ++L LG+VL VV+++ + Q + K+++SF + P +LV RGGE ++ E+V+GD+V +K GD+IPAD+R I +G VDNSSLTGES P R+ ++ E +N+ FF T V+GSA G+VI TGDST MG+IA+ ++P+ +EIE F+ + +A GV FF L L++ +L+ +FL+G
Sbjct: 100 FSIQLYFSEDATK-DNLYLGIVLTVVVVITGCFSYYQEAKSSKIMESFKNMVPQQALVIRGGEKFQIPVREVVVGDLVEVKGGDRIPADIRLISSHGCKVDNSSLTGESEPQSRSTEFTNENPLETQNICFFSTNCVEGSAQGIVIATGDSTVMGRIASLTSGLVVGKTPIAIEIEHFIHLITAVAVFLGVTFFGLS-LILGYTWLEAVIFLIG 311
BLAST of mRNA_Ecto-sp13_S_contig1475.3629.1 vs. uniprot
Match: A0A6G3MIX7_HENSL (Sodium/potassium-transporting ATPase subunit alpha-3 (Trinotate prediction) (Fragment) n=1 Tax=Henneguya salminicola TaxID=69463 RepID=A0A6G3MIX7_HENSL) HSP 1 Score: 149 bits (377), Expect = 3.580e-41 Identity = 82/214 (38.32%), Postives = 130/214 (60.75%), Query Frame = 1
Query: 10 YAVSVFESESSTDMESLQLGLVLAVVILLNTLLDFTQRQNAEKVLKSFSKLCPSSSLVNRGGETLEVDSTELVMGDVVTLKAGDKIPADLRFIWCNGATVDNSSLTGESAPLKRTATARTDSSREAENMGFFGTTLVQGSALGVVIRTGDSTTMGQIAASAGVKRTIESPLTVEIEMFVKMTAVIATITGVIFFALGYLLVDSDFLDQFVFLVG 651
Y +S F S+ + ++L LG+ L +V+L++ + + Q + +++ SF KL P S++ R G+ L + + ++V+GD+V ++ GD IPADLR I VDNSSLTGES P KR++ D+ E N+ F T +G+ GVV+ TGD+T MG+IA ++P+ EI+ F+++ +IA I G+IFF L +L S F+ VFL+G
Sbjct: 16 YLISYF-SDPTASQDNLWLGIFLVLVVLISGVFSYYQESKSSRIMDSFKKLVPQESIIIRDGKKLNIRADQIVVGDIVIIQGGDLIPADLRVIESKSFKVDNSSLTGESEPQKRSSECTNDNLLETANIAFAFTYATEGTCTGVVVMTGDNTVMGRIAKLTSGVEVNKTPIGKEIQKFIRLITIIAFIIGIIFFILTLILTSSGFMTAVVFLIG 228 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1475.3629.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1475.3629.1 >prot_Ecto-sp13_S_contig1475.3629.1 ID=prot_Ecto-sp13_S_contig1475.3629.1|Name=mRNA_Ecto-sp13_S_contig1475.3629.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=220bp MKIYAVSVFESESSTDMESLQLGLVLAVVILLNTLLDFTQRQNAEKVLKSback to top mRNA from alignment at Ecto-sp13_S_contig1475:166..2935- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1475.3629.1 ID=mRNA_Ecto-sp13_S_contig1475.3629.1|Name=mRNA_Ecto-sp13_S_contig1475.3629.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2770bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1475:166..2935- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1475:166..2935- >mRNA_Ecto-sp13_S_contig1475.3629.1 ID=mRNA_Ecto-sp13_S_contig1475.3629.1|Name=mRNA_Ecto-sp13_S_contig1475.3629.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=660bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1475:166..2935- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |