mRNA_Ecto-sp13_S_contig14674.3579.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig14674.3579.1 vs. uniprot
Match: D7FRT0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRT0_ECTSI) HSP 1 Score: 412 bits (1058), Expect = 9.150e-144 Identity = 199/210 (94.76%), Postives = 207/210 (98.57%), Query Frame = 1
Query: 10 GLPAGAVASSSTLWRNSKIRPRMGTEFEDENAKEKLKAMLNRQFGIGDTSRPEEWCKPTDILQTGTVLLADPKAFTTKSHPRMLDKFGLAQPLPGSDQIPPDRAADLLPVVLLVGIDAGRTIGLMLNRRTGVLMGDLGEDFTSFMIQPLWLGGTQGENGITFIHTYPEIEGAQAISEEEGLYFSGNMESASKVVTDGPGSGFNFRFFAQV 639
GLPAGAVAS ST WRN+KIRPRMGTEFEDENAKEKLKAMLNRQFGIGDTSRP+EWCKPTD+LQTGTVLLADPKAFTT+SHP+MLDKFGLAQPLPGS+QIPPDRAADLLPVVLLVGIDAGRTIGLMLNRRTGVLMGDLG DFTSFMIQPLWLGGTQGENGITFIHTYPE+EGAQAISEEEGLYFSGNMESASKVVTDGPGSGFNFRFFAQ+
Sbjct: 35 GLPAGAVASRSTSWRNNKIRPRMGTEFEDENAKEKLKAMLNRQFGIGDTSRPDEWCKPTDVLQTGTVLLADPKAFTTRSHPKMLDKFGLAQPLPGSEQIPPDRAADLLPVVLLVGIDAGRTIGLMLNRRTGVLMGDLGNDFTSFMIQPLWLGGTQGENGITFIHTYPEVEGAQAISEEEGLYFSGNMESASKVVTDGPGSGFNFRFFAQI 244
BLAST of mRNA_Ecto-sp13_S_contig14674.3579.1 vs. uniprot
Match: A0A835YZZ3_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZZ3_9STRA) HSP 1 Score: 195 bits (495), Expect = 3.060e-58 Identity = 109/211 (51.66%), Postives = 143/211 (67.77%), Query Frame = 1
Query: 10 GLPAGAVASSSTLWRNSKIRP-RMGTEFEDENAKEKLKAMLNRQFGIG-DTSRPEEWCKPTDILQTGTVLLADPKAFTTKSHPRMLDKFGLAQPLPGSDQIPPDRAADLLPVVLLVGIDAGRTIGLMLNRRTGVLMGDLGEDFTSFMIQPLWLGGTQGENGITFIHTYPEIEGAQAISEEEGLYFSGNMESASKVVTDGPGSGFNFRFFAQ 636
G +GA + + L S RMG E+ DE A+ KL+ MLN+QFG G T + +EW KP D + GTVLLADP+ F K + L +FGL +P+P I PDR ADLLP +LLV +IG+MLNRRTG+LMGDLGED ++FMIQP++LGGT G ++FIHTYPE+ A+ ++ E+GL+F G+ +SA V +G GSGFNFRFF Q
Sbjct: 44 GDSSGATKAPAALSSRSGSHVLRMG-EYMDEEAQRKLRDMLNKQFGKGAGTVKADEWAKPADAIGVGTVLLADPRPFF-KGDAKTLQRFGLPEPIP--QVISPDRQADLLPCILLVQHGPRGSIGVMLNRRTGMLMGDLGEDMSAFMIQPIFLGGTLGSQSLSFIHTYPEVAQAEQVT-EDGLFFGGDFKSAVHCVREGIGSGFNFRFFVQ 249
BLAST of mRNA_Ecto-sp13_S_contig14674.3579.1 vs. uniprot
Match: A0A7S1UHR3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UHR3_9STRA) HSP 1 Score: 129 bits (325), Expect = 5.700e-33 Identity = 82/211 (38.86%), Postives = 116/211 (54.98%), Query Frame = 1
Query: 28 VASSSTLWRNSKIRPRMGTEFEDENA--KEKLKA---MLNRQFGIGDTSRPEEWCKPTDILQTGTVLLADPKAFTTKSHPRMLDKFGLAQPLPGSDQIPPDRAADLLPVVLLVGIDAGRTIGLMLNRRTGVLMGDLGED--FTSFMIQPLWLGGTQGENGITFIHTYPEIEGAQAISEEEGLYFSGNMESASKVVTDGPGSGFNFRFFAQV 639
+ ST P ED+ A +EKL A +R +T EW +P G +L+A+P AF P K+G+ PG +PPDR A+LLPVV+L ++ G +LNRRTG++MGDL E F +QP+W GG GE ++ +HTYP++EGA+ IS +GL+ G+ E+A VT+G SG+NF+FF QV
Sbjct: 67 LMEQSTSGATPNTPPPAPASAEDDVASFREKLLAGAMEFDRVTEAQNTPEATEWVQPCGGPVGGGLLIANPDAFF--EDPMFQGKYGVQGFAPGD--LPPDRLAELLPVVMLYMHGDLQSAGFVLNRRTGMMMGDLAEQHGLRCFQVQPIWYGGPHGEGQLSMVHTYPQVEGARKIS--DGLWLGGSFEAAQDEVTEGIASGWNFKFFLQV 271
BLAST of mRNA_Ecto-sp13_S_contig14674.3579.1 vs. uniprot
Match: A0A4D9D9B7_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D9B7_9STRA) HSP 1 Score: 115 bits (289), Expect = 1.660e-27 Identity = 66/164 (40.24%), Postives = 93/164 (56.71%), Query Frame = 1
Query: 169 EWCKPTDILQTGTVLLADPKAFTTKSHPRMLDKF--------GLAQPLPGSDQIPPDRAADLLPVVLLVGIDAGRTIGLMLNRRTGVLMGDLGEDFTSFMIQPLWLGGTQGENGITFIHTYPEIEGAQAISEEEGLYFSGNMESASKVVTDGPGSGFNFRFFAQ 636
+W + L+ G VL+A+P F + +F GL G Q D A++LPVVLL+G +G T GL+LNRRTG L+GDL D + F IQP+ LGGT +GI +HTYPE+E A ++ +GL+F GN +A ++V + S F+FF Q
Sbjct: 88 DWAVYSSALRGGVVLVANPAVFLAGPPAGLASRFLLPSDLSLGLFSSFGGESQQAIDNLANILPVVLLLGSGSGGTSGLVLNRRTGYLVGDLNVDSSGFKIQPVHLGGTGESDGIFMVHTYPELERATQVT-NDGLFFGGNYTAAQELVREQGASSSRFKFFIQ 250
BLAST of mRNA_Ecto-sp13_S_contig14674.3579.1 vs. uniprot
Match: W7TWF9_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TWF9_9STRA) HSP 1 Score: 115 bits (289), Expect = 4.520e-27 Identity = 67/164 (40.85%), Postives = 93/164 (56.71%), Query Frame = 1
Query: 169 EWCKPTDILQTGTVLLADPKAFTTKSHPRMLDKF--------GLAQPLPGSDQIPPDRAADLLPVVLLVGIDAGRTIGLMLNRRTGVLMGDLGEDFTSFMIQPLWLGGTQGENGITFIHTYPEIEGAQAISEEEGLYFSGNMESASKVVTDGPGSGFNFRFFAQ 636
+W + L+ G VL+A+P F + +F GL G Q D A++LPVVLL+G +G T GL+LNRRTG L+GDL D + F IQP+ LGGT +GI IHTYPE+E A ++ +GL+F GN +A ++V + S F+FF Q
Sbjct: 88 DWAVYSSALRGGVVLVANPAVFLAGPPAGLASRFLLPSDLSLGLFSSFGGGGQQAIDNLANILPVVLLLGSGSGGTSGLVLNRRTGYLVGDLNVDSSGFKIQPVHLGGTGESDGIFMIHTYPELERATQVT-NDGLFFGGNYTAAQELVREQGASSSRFKFFIQ 250
BLAST of mRNA_Ecto-sp13_S_contig14674.3579.1 vs. uniprot
Match: A0A7S2DJT8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DJT8_9STRA) HSP 1 Score: 114 bits (284), Expect = 1.530e-26 Identity = 69/175 (39.43%), Postives = 98/175 (56.00%), Query Frame = 1
Query: 163 PEEWCKPTDI---LQTGTVLLADPKAFTTKSHPR-MLDKFGLAQPLPGSDQIPPDRAADLLPVVLLVGIDAGRTIGLMLNRRTGVLMGDLGE-DFTSFMIQPLWLGGTQGE-NGITFIHTYPEIEGAQAISE-------------EEGLYFSGNMESASKVVTDGPGSGFNFRFF 630
P W K I L+ G V+L +PK F + P ML +FGL QP+P ++ + P+ A+LLPV+LLV D G GL+LNRRTG LMG+L + D + F +QPL LGG E + +++IH Y E+ G + +S E L+ GN + A +V + GF F+FF
Sbjct: 121 PSYWSKTVAIEGALRPGLVVLGNPKLFCNEEAPEEMLMQFGLRQPVPNAEDLDPNSRANLLPVILLVETDNGPAKGLLLNRRTGYLMGELKDKDVSGFRVQPLNLGGMADEASDLSYIHPYAELSGCEGLSSDYDNDNAGDRKEGESSLFLGGNFKEAQDMVQEEIFDGFKFKFF 295
BLAST of mRNA_Ecto-sp13_S_contig14674.3579.1 vs. uniprot
Match: A0A1E7FXR6_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FXR6_9STRA) HSP 1 Score: 107 bits (268), Expect = 1.820e-24 Identity = 75/208 (36.06%), Postives = 105/208 (50.48%), Query Frame = 1
Query: 166 EEWCKPTDILQTGTVLLADPKAF---------------------------TTKSHPRMLDKFGLAQPLPGSDQIPPDRAADLLPVVLLVGIDAGRTIGLMLNRRTGVLMGDL---GEDFTS---------------FMIQPLWLGGTQGEN-GITFIHTYPEIEGAQAISEEEGLYFSGNMESASKVVTDGPG-----SGFNFRFFAQ 636
E+W KP + ++ GTVL+A+P+ F ++K P +L KFGL QP P + DR ADLLPVV++V D G+ G++LNRRTG L+GDL ED +S F IQPLW GG + G+ +H P + AQ I+ E+G+Y+ G+ A + D P SGF+F+FF Q
Sbjct: 58 EDWAKPMEGIRPGTVLIANPRKFCEDGDFGDSGSDDNESTGVKDFLKFGWSSKPDPSLLAKFGLTQPPPR--HLGADRQADLLPVVIVVSTDGGQIQGVLLNRRTGYLLGDLEQPAEDGSSDDNNDNNDMAPILEKFCIQPLWFGGIDSLSVGLDMLHLCPTVNDAQQIT-EDGMYWGGDPTQAQDAMED-PSLDRIYSGFDFKFFVQ 261
BLAST of mRNA_Ecto-sp13_S_contig14674.3579.1 vs. uniprot
Match: A0A7S2B470_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B470_9STRA) HSP 1 Score: 102 bits (255), Expect = 5.020e-24 Identity = 55/106 (51.89%), Postives = 73/106 (68.87%), Query Frame = 1
Query: 322 ADLLPVVLLV-GIDAGRTIGLMLNRRTGVLMGDLGEDFTSFMIQPLWLGGTQGENGITFIHTYPEIEGAQAISEEEGLYFSGNMESASKVVTDGPGSGFNFRFFAQ 636
A+L+PV+++ G ++ +GLMLNRRTG LMGDL +D + FMIQPL GGTQ ++F+H YPEI G+ I E+GLY+SGN + A +V G S F FRFF Q
Sbjct: 1 ANLMPVIIVTSGSESEGYMGLMLNRRTGYLMGDLEQDVSGFMIQPLNFGGTQPPADLSFLHPYPEIGGSTQIG-EDGLYYSGNFKDAQMLVEKGTCSQFKFRFFIQ 105
BLAST of mRNA_Ecto-sp13_S_contig14674.3579.1 vs. uniprot
Match: A0A7S1BTP6_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BTP6_9STRA) HSP 1 Score: 106 bits (265), Expect = 1.880e-23 Identity = 62/142 (43.66%), Postives = 90/142 (63.38%), Query Frame = 1
Query: 256 MLDKFGLAQPLPGSDQIPPDRAADLLPVVLLVGID---AGRTIGLMLNRRTGVLMGDLGED--------FTSFMIQPLWLGGTQGENGITFIHTYPEIEGAQAISEEEGLYFSGNMESASKVVTDGP-GSGF---NFRFFAQ 636
+L KFGL P P ++ PDR ADLLPV+L++ D G + +++NRRTG L+GDL D + FMIQPLW GGT G +G+T +H +EG++ I+ E+G+YF G++ S ++++G GSGF NF+FF Q
Sbjct: 204 LLSKFGLTLPPPS--ELGPDRQADLLPVLLILSHDPSIVGGSTAVLVNRRTGYLLGDLESDDGAGPLAGLSPFMIQPLWFGGTSGGSGMTVVHQCEGVEGSEKIT-EDGIYFGGDVGSVGTLLSEGDAGSGFSSFNFKFFVQ 342
BLAST of mRNA_Ecto-sp13_S_contig14674.3579.1 vs. uniprot
Match: A0A7S0L8V4_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0L8V4_9EUKA) HSP 1 Score: 104 bits (259), Expect = 3.290e-23 Identity = 71/195 (36.41%), Postives = 109/195 (55.90%), Query Frame = 1
Query: 91 EDENAKEKLKAMLNRQFGIG-DTSRP------EEWCKPTDILQTGTVLLADPKAFTTKS---HP-RMLDKFGLAQPLPGSDQIPPDRAADLLPVVLLVGIDAGRTIGLMLNRRTGVLMGDLG-EDFTSFMIQPLWLGGTQGENGITFIHTYPEIEGAQAISEEEGLYFSGNMESASKVVTDGPGSGFNFRFFAQV 639
ED E +A L RQFG+G D P EE + +D+ TG +L+A+P+ F +++ P R + +FGL P+ G D++ PD A +LPV+L+ G + L+L RRTG LMGD+ +DF I PLWLGGT ++ + +HT ++ GA ++ EG++ G ++A V D + F+FF V
Sbjct: 64 EDSGEIEAYRAKLMRQFGMGADADTPASPAASEETVELSDVPATGLLLVANPRKFCSRNPFARPVRDIQRFGLQGPVSG-DELSPDLKAQMLPVLLITEHGDGGSKALLLERRTGALMGDISMDDFGCVAIAPLWLGGTGRQSSLYVLHTVEDLAGATPVA--EGIWLGG-WDAARPKVADSSLAESRFKFFLGV 254 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14674.3579.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig14674.3579.1 >prot_Ecto-sp13_S_contig14674.3579.1 ID=prot_Ecto-sp13_S_contig14674.3579.1|Name=mRNA_Ecto-sp13_S_contig14674.3579.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=213bp APPGLPAGAVASSSTLWRNSKIRPRMGTEFEDENAKEKLKAMLNRQFGIGback to top mRNA from alignment at Ecto-sp13_S_contig14674:682..4342- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig14674.3579.1 ID=mRNA_Ecto-sp13_S_contig14674.3579.1|Name=mRNA_Ecto-sp13_S_contig14674.3579.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3661bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14674:682..4342- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig14674:682..4342- >mRNA_Ecto-sp13_S_contig14674.3579.1 ID=mRNA_Ecto-sp13_S_contig14674.3579.1|Name=mRNA_Ecto-sp13_S_contig14674.3579.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=639bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14674:682..4342- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |