mRNA_Ecto-sp13_S_contig14671.3577.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig14671.3577.1 vs. uniprot
Match: A0A6H5K7W3_9PHAE (PUM-HD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7W3_9PHAE) HSP 1 Score: 157 bits (397), Expect = 9.180e-43 Identity = 83/87 (95.40%), Postives = 85/87 (97.70%), Query Frame = 1
Query: 13 QEVVPQLVDSYMLLLSTRPGSMAAAMCAAHGGAKERKRMMRALKGYVIASLMHRDAYIAVIRLVESVDDTVTCQKTILAELLKPKEV 273
QE+VPQLVDSY+LLLSTRPGSMAAAMCAAHGGAKERKRMMRALKGYV ASLMHRDAYIAVIRLVESVDDTVTCQK ILAELLKPKEV
Sbjct: 361 QELVPQLVDSYILLLSTRPGSMAAAMCAAHGGAKERKRMMRALKGYVAASLMHRDAYIAVIRLVESVDDTVTCQKAILAELLKPKEV 447
BLAST of mRNA_Ecto-sp13_S_contig14671.3577.1 vs. uniprot
Match: A0A835Z7T9_9STRA (Armadillo-type protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7T9_9STRA) HSP 1 Score: 115 bits (289), Expect = 3.990e-28 Identity = 58/83 (69.88%), Postives = 71/83 (85.54%), Query Frame = 1
Query: 16 EVVPQLVDSYMLLLSTRPGSMAAAMCAAHGGAKERKRMMRALKGYVIASLMHRDAYIAVIRLVESVDDTVTCQKTILAELLKP 264
++VP ++D YM LLSTR GS AAA+CAA+G AK+RKRMM+ KG+V SLMHRDAY+AV+RLV SVDDTVTCQK++LAELL P
Sbjct: 386 DMVPTVIDGYMALLSTRDGSRAAALCAAYGSAKDRKRMMKGFKGFVGTSLMHRDAYLAVLRLVASVDDTVTCQKSVLAELLVP 468
BLAST of mRNA_Ecto-sp13_S_contig14671.3577.1 vs. uniprot
Match: D7FHP3_ECTSI (PUM-HD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHP3_ECTSI) HSP 1 Score: 100 bits (248), Expect = 1.370e-22 Identity = 51/55 (92.73%), Postives = 52/55 (94.55%), Query Frame = 1
Query: 13 QEVVPQLVDSYMLLLSTRPGSMAAAMCAAHGGAKERKRMMRALKGYVIASLMHRD 177
QE+VPQLVDSYMLLLSTRPGSMAAAMCAAHGGAKERKRMMRALKGYV ASL H D
Sbjct: 362 QELVPQLVDSYMLLLSTRPGSMAAAMCAAHGGAKERKRMMRALKGYVAASLTHSD 416
BLAST of mRNA_Ecto-sp13_S_contig14671.3577.1 vs. uniprot
Match: A0A4D9CTP5_9STRA (PUM-HD domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CTP5_9STRA) HSP 1 Score: 88.2 bits (217), Expect = 2.110e-18 Identity = 43/87 (49.43%), Postives = 63/87 (72.41%), Query Frame = 1
Query: 13 QEVVPQLVDSYMLLLSTRPGSMAAAMCAAHGGAKERKRMMRALKGYVIASLMHRDAYIAVIRLVESVDDTVTCQKTILAELLKPKEV 273
+E+VP L+D +LL TRPG A A CAA+G K+RK+M++ALKGYV+ +L+H+DAY+ ++RL + +DDTV K + ELL+ V
Sbjct: 260 RELVPTLLDYLLLLTGTRPGCKALAECAAYGTPKDRKKMLKALKGYVVPTLLHKDAYLLILRLADVIDDTVAFNKAVWQELLERNAV 346
BLAST of mRNA_Ecto-sp13_S_contig14671.3577.1 vs. uniprot
Match: A0A7S1ZSE9_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZSE9_9STRA) HSP 1 Score: 85.9 bits (211), Expect = 5.190e-18 Identity = 44/81 (54.32%), Postives = 59/81 (72.84%), Query Frame = 1
Query: 13 QEVVPQLVDSYMLLLSTRPGSMAAAMCAAHGGAKERKRMMRALKGYVIASLMHRDAYIAVIRLVESVDDTVTCQKTILAEL 255
+ + P +VD + +LSTR G+ A CAA+G K+RK +MR+LKGY +SL+HRDAYIAV+RL + VDDTVT K +L EL
Sbjct: 2 RSIPPSVVDHSIHMLSTRAGARVVAECAAYGTVKDRKNIMRSLKGYTRSSLLHRDAYIAVLRLADVVDDTVTLDKNVLVEL 82
BLAST of mRNA_Ecto-sp13_S_contig14671.3577.1 vs. uniprot
Match: A0A7S4QEX1_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QEX1_9STRA) HSP 1 Score: 86.7 bits (213), Expect = 7.180e-18 Identity = 44/81 (54.32%), Postives = 59/81 (72.84%), Query Frame = 1
Query: 13 QEVVPQLVDSYMLLLSTRPGSMAAAMCAAHGGAKERKRMMRALKGYVIASLMHRDAYIAVIRLVESVDDTVTCQKTILAEL 255
+ + P +VD + +LSTR G+ A CAA+G K+RK +MR+LKGY +SL+HRDAYIAV+RL + VDDTVT K +L EL
Sbjct: 264 RSIAPSVVDHSIHMLSTRAGARVVAECAAYGTVKDRKNIMRSLKGYTRSSLLHRDAYIAVLRLADVVDDTVTLDKNVLVEL 344
BLAST of mRNA_Ecto-sp13_S_contig14671.3577.1 vs. uniprot
Match: A0A7S2XI69_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XI69_9STRA) HSP 1 Score: 84.7 bits (208), Expect = 1.350e-17 Identity = 41/76 (53.95%), Postives = 61/76 (80.26%), Query Frame = 1
Query: 31 LVDSYMLLLSTRPGSMAAAMCAAHGGAKERKRMMRALKGYVIASLMHRDAYIAVIRLVESVDDTVTCQKTILAELL 258
+VD + LSTRPGS+ A CA++G K+RKR++++LKGY +SL+HRDAYIA++R+V+ DDTV+ K++LAE+L
Sbjct: 31 VVDHSIHFLSTRPGSIVVAACASYGTPKDRKRIIKSLKGYTRSSLLHRDAYIAILRIVDVTDDTVSVHKSVLAEIL 106
BLAST of mRNA_Ecto-sp13_S_contig14671.3577.1 vs. uniprot
Match: A0A7S1TQU4_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TQU4_9STRA) HSP 1 Score: 84.7 bits (208), Expect = 2.930e-17 Identity = 44/85 (51.76%), Postives = 65/85 (76.47%), Query Frame = 1
Query: 16 EVVPQLVDSYMLLLSTRPGSMAAAMCAAHGGAKERKRMMRALKGYVIASLMHRDAYIAVIRLVESVDDTVTCQKTILAELLKPKE 270
+ P L + ++LL++R G+ AAA+ AA+GGA+ERKRM +ALKG+V A+L HRDAYIA+++LV+ DDTV+ +K IL E+ + E
Sbjct: 94 KAAPALAEHAIMLLTSREGARAAALVAAYGGARERKRMTKALKGHVKATLHHRDAYIALLKLVDVTDDTVSTKKNILPEIFEVAE 178
BLAST of mRNA_Ecto-sp13_S_contig14671.3577.1 vs. uniprot
Match: A0A7S1CXQ3_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1CXQ3_CYCTE) HSP 1 Score: 82.8 bits (203), Expect = 1.030e-16 Identity = 40/76 (52.63%), Postives = 59/76 (77.63%), Query Frame = 1
Query: 31 LVDSYMLLLSTRPGSMAAAMCAAHGGAKERKRMMRALKGYVIASLMHRDAYIAVIRLVESVDDTVTCQKTILAELL 258
+VD + +LSTR G+ A CA +G AK+RKR+M++LKGY +SL+HRDAY+A++RL++ DDTV K++LAE+L
Sbjct: 50 VVDHSIHMLSTRAGTCVVAACAGYGTAKDRKRIMKSLKGYTRSSLLHRDAYLAILRLIQVTDDTVALHKSVLAEIL 125
BLAST of mRNA_Ecto-sp13_S_contig14671.3577.1 vs. uniprot
Match: A0A7S2SB37_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2SB37_9STRA) HSP 1 Score: 83.2 bits (204), Expect = 1.150e-16 Identity = 44/79 (55.70%), Postives = 56/79 (70.89%), Query Frame = 1
Query: 19 VVPQLVDSYMLLLSTRPGSMAAAMCAAHGGAKERKRMMRALKGYVIASLMHRDAYIAVIRLVESVDDTVTCQKTILAEL 255
+ P + D + LLSTR G+ A CAA+ KERKRMMR+LKGY +SL H DAYIA++RL++ DDTVT QK +L EL
Sbjct: 282 IAPSISDHAIHLLSTRSGARVVAECAAYSTPKERKRMMRSLKGYTRSSLKHADAYIALLRLIDVTDDTVTAQKLLLEEL 360 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14671.3577.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig14671.3577.1 >prot_Ecto-sp13_S_contig14671.3577.1 ID=prot_Ecto-sp13_S_contig14671.3577.1|Name=mRNA_Ecto-sp13_S_contig14671.3577.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=91bp THVFQEVVPQLVDSYMLLLSTRPGSMAAAMCAAHGGAKERKRMMRALKGYback to top mRNA from alignment at Ecto-sp13_S_contig14671:221..896+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig14671.3577.1 ID=mRNA_Ecto-sp13_S_contig14671.3577.1|Name=mRNA_Ecto-sp13_S_contig14671.3577.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=676bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14671:221..896+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig14671:221..896+ >mRNA_Ecto-sp13_S_contig14671.3577.1 ID=mRNA_Ecto-sp13_S_contig14671.3577.1|Name=mRNA_Ecto-sp13_S_contig14671.3577.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=273bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14671:221..896+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |