mRNA_Ecto-sp13_S_contig14659.3566.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig14659.3566.1 vs. uniprot
Match: D7G3Q6_ECTSI (Glutamate dehydrogenase 2 (NADP-dependent) n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G3Q6_ECTSI) HSP 1 Score: 409 bits (1050), Expect = 2.710e-139 Identity = 205/210 (97.62%), Postives = 207/210 (98.57%), Query Frame = 1
Query: 4 QYKRMSLDASPIGRGLLWGGAVPHPECAGYGVVYFAEKAMRGQGESLMGKRCIVTGSGKVALHVAEKLLELGATPMTFTDSSGHVFEPEGFDVEKFKKIAKIKQERGARTPRGYIVASPSAKYNEPQSVFDAPADVAFLCRTSNELTEVEANALVASGCKTVVDGGYRPVSTAAAEVLKKNGIFHVPYRGTMIGAAISGGRELDRNPLKP 633
QYKRMSLDASPIGRGLLWGGAVPHPECAGYGVVYFAEKAMRG+GESLMGKRCIVTGSGKVALHVAEKLLELGATPMTFTDSSGHVFEPEGFDVEKFKKIAKIKQERGAR R YIVASPSAKYNEPQSVFDAPADVAFLCRTSNELTEVEANALVASGCKTVVDGGYRPVSTAAAEVLKKNGIFHVPYRGTMIGAAISGGRELDRNPL+P
Sbjct: 272 QYKRMSLDASPIGRGLLWGGAVPHPECAGYGVVYFAEKAMRGRGESLMGKRCIVTGSGKVALHVAEKLLELGATPMTFTDSSGHVFEPEGFDVEKFKKIAKIKQERGARVGR-YIVASPSAKYNEPQSVFDAPADVAFLCRTSNELTEVEANALVASGCKTVVDGGYRPVSTAAAEVLKKNGIFHVPYRGTMIGAAISGGRELDRNPLQP 480
BLAST of mRNA_Ecto-sp13_S_contig14659.3566.1 vs. uniprot
Match: D8LK56_ECTSI (Glutamate dehydrogenase 1 (NADP-dependent) n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LK56_ECTSI) HSP 1 Score: 225 bits (573), Expect = 1.240e-67 Identity = 108/208 (51.92%), Postives = 143/208 (68.75%), Query Frame = 1
Query: 4 QYKRMSLDASPIGRGLLWGGAVPHPECAGYGVVYFAEKAMRGQGESLMGKRCIVTGSGKVALHVAEKLLELGATPMTFTDSSGHVFEPEGFDVEKFKKIAKIKQERGARTPRGYIVASPSAKYNEPQSVFDAPADVAFLCRTSNELTEVEANALVASGCKTVVDGGYRPVSTAAAEVLKKNGIFHVPYRGTMIGAAISGGRELDRNPL 627
QYKR++ + GRG+LWGGA+P+PE GYGVV FA + +G+SL GKRC++TGSGKVA+HVAEKLL+LGA P+TF+DSSGH++EPEG D K + I KIK ERGAR R YI+AS +A+Y EP ++FD P D+AF C NE+ E A L +GC V++G P + AA V +K G+ P+ T+ G+ I G L NP+
Sbjct: 265 QYKRINDHVAQRGRGVLWGGAMPYPEATGYGVVEFARCMLEDKGDSLKGKRCLITGSGKVAVHVAEKLLQLGAIPLTFSDSSGHIYEPEGIDSAKLRTIVKIKSERGARVGR-YIIASTTAQYTEPANIFDIPCDLAFACSHRNEVDETAATLLADTGCSAVIEGASAPCTKAAKAVFRKRGLLFAPHVATLAGSGIVSGLALATNPV 471
BLAST of mRNA_Ecto-sp13_S_contig14659.3566.1 vs. uniprot
Match: A0A6V1RCQ3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1RCQ3_HETAK) HSP 1 Score: 218 bits (555), Expect = 4.970e-65 Identity = 107/208 (51.44%), Postives = 138/208 (66.35%), Query Frame = 1
Query: 4 QYKRMSLDASPIGRGLLWGGAVPHPECAGYGVVYFAEKAMRGQGESLMGKRCIVTGSGKVALHVAEKLLELGATPMTFTDSSGHVFEPEGFDVEKFKKIAKIKQERGARTPRGYIVASPSAKYNEPQSVFDAPADVAFLCRTSNELTEVEANALVASGCKTVVDGGYRPVSTAAAEVLKKNGIFHVPYRGTMIGAAISGGRELDRNPL 627
QYKR S +GRGLLWGGA P P C G+GV +FA++ + +GESL GKRC++TGSGK A VA KLLE GA P+TF+DSSGH++EP+G D KFK++AKIK ERGAR R YI+AS +A+YNEP+ +F P D+ FLC NE+ A + G VV+G P S A +V KK G+ PYR T+ GA++ G L N +
Sbjct: 258 QYKRTHNHISHLGRGLLWGGAPPFPHCTGFGVAHFAQQMLEDKGESLKGKRCLITGSGKNAQAVARKLLEFGAVPLTFSDSSGHIYEPDGLDAVKFKQVAKIKAERGARIGR-YIIASTTARYNEPEDLFGIPCDLVFLCGPMNEVGAAAAQQIADGGALGVVEGCNMPCSPEAIKVFKKRGLLFAPYRATLAGASLVNGTALAHNRI 464
BLAST of mRNA_Ecto-sp13_S_contig14659.3566.1 vs. uniprot
Match: A0A4D9CY97_9STRA (Glutamate dehydrogenase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CY97_9STRA) HSP 1 Score: 214 bits (544), Expect = 1.860e-63 Identity = 104/206 (50.49%), Postives = 140/206 (67.96%), Query Frame = 1
Query: 4 QYKRMSLDASPIGRGLLWGGAVPHPECAGYGVVYFAEKAMRGQGESLMGKRCIVTGSGKVALHVAEKLLELGATPMTFTDSSGHVFEPEGFDVEKFKKIAKIKQERGARTPRGYIVASPSAKYNEPQSVFDAPADVAFLCRTSNELTEVEANALVASGCKTVVDGGYRPVSTAAAEVLKKNGIFHVPYRGTMIGAAISGGRELDRN 621
QYKRMS+ + G+GLLWGG P P+ GVV++A + + G+G+SL GKRC++TGSGK+ALHVAEKL+E+GA P+T +D+SGHV+EP+G D K K I KIK ERGAR R YI+AS +AKYNEP++VF PAD+ F C T NE+ V A L G + V +G + P + A + KK GI H + T+ +I G EL ++
Sbjct: 253 QYKRMSIHHAQKGKGLLWGGVYPFPQATASGVVHWAARVLEGKGDSLEGKRCLITGSGKMALHVAEKLVEMGAVPLTLSDTSGHVYEPDGIDAAKLKTIMKIKSERGARIGR-YIIASTTAKYNEPENVFSVPADLVFPCATHNEIDGVTATMLADMGVQGVFEGSHMPCTNQAISIFKKRGILHGGHVATLAADSIFNGLELSKS 457
BLAST of mRNA_Ecto-sp13_S_contig14659.3566.1 vs. uniprot
Match: A0A836CHL3_9STRA (Glutamate dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHL3_9STRA) HSP 1 Score: 207 bits (527), Expect = 3.180e-61 Identity = 101/210 (48.10%), Postives = 139/210 (66.19%), Query Frame = 1
Query: 4 QYKRMSLDASPIGRGLLWGGAVPHPECAGYGVVYFAEKAMRGQGESLMGKRCIVTGSGKVALHVAEKLLELGATPMTFTDSSGHVFEPEGFDVEKFKKIAKIKQERGARTPRGYIVASPSAKYNEPQSVFDAPADVAFLCRTSNELTEVEANALVASGCKTVVDGGYRPVSTAAAEVLKKNGIFHVPYRGTMIGAAISGGRELDRNPLKP 633
QYKR++ + GRG+LWGG +PE G+GVVYFA + +R +G+SL GKRC+VTGSGK+AL +A KLLELGA P++F+DS+GH+ E +GFD K + + IK ERGAR R YI++S +A++N+P+ +FD PADV F NE+ A L +GC V++G P + AA V +K G+ P+ T+ G I G EL NPL P
Sbjct: 222 QYKRVNDHVAQKGRGVLWGGIPLYPEGVGHGVVYFANEMLRDKGDSLKGKRCLVTGSGKLALSIAGKLLELGAIPISFSDSNGHIVETDGFDAAKLRTVVSIKNERGARLGR-YIISSTTARFNDPECIFDVPADVVFAAAHRNEIDADRAQRLAENGCLAVIEGANSPCTKAAKAVFRKRGVLFGPHMATLAGNGIVSGFELSSNPLLP 430
BLAST of mRNA_Ecto-sp13_S_contig14659.3566.1 vs. uniprot
Match: A0A7S2RRL7_9STRA (Glutamate dehydrogenase n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RRL7_9STRA) HSP 1 Score: 195 bits (496), Expect = 7.250e-57 Identity = 95/208 (45.67%), Postives = 134/208 (64.42%), Query Frame = 1
Query: 4 QYKRMSLDASPIGRGLLWGGAVPHPECAGYGVVYFAEKAMRGQGESLMGKRCIVTGSGKVALHVAEKLLELGATPMTFTDSSGHVFEPEGFDVEKFKKIAKIKQERGARTPRGYIVASPSAKYNEPQSVFDAPADVAFLCRTSNELTEVEANALVASGCKTVVDGGYRPVSTAAAEVLKKNGIFHVPYRGTMIGAAISGGRELDRNPL 627
QYKR+ + G G LWGG VP G+GV +FAE+ +R + E+L GKR ++TGSG +AL VAE+LL+ GA P+TF+DSSGH++E +G D K I IK ERGAR R YIVAS +AKY++P+ +F P D+ C S E+T+ A L+A+GCK +V+GG P + A L++NGI PY+ T+ A++ G L + +
Sbjct: 197 QYKRIKDIGAKQGSGFLWGGRVPWRFAYGHGVAHFAERMLRDKKETLQGKRVLITGSGNIALGVAERLLQFGAIPVTFSDSSGHIYEQDGIDASKLATIKHIKSERGARLGR-YIVASTTAKYSDPEDIFSIPCDICIPCGPSQEVTDSVAQTLIANGCKAIVEGGSSPCTPDAIVTLRRNGILFAPYKATLSAGAVTSGGALQSSSI 403
BLAST of mRNA_Ecto-sp13_S_contig14659.3566.1 vs. uniprot
Match: A0A7S3ZJ22_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZJ22_9STRA) HSP 1 Score: 193 bits (491), Expect = 1.060e-55 Identity = 101/199 (50.75%), Postives = 133/199 (66.83%), Query Frame = 1
Query: 4 QYKRMSLDASPIGRGLLWGGAVPHPECAGYGVVYFAEKAMRGQGESLMGKRCIVTGSGKVALHVAEKLLELGATPMTFTDSSGHVFEPEGFDVEKFKKIAKIKQERGARTPRGYIVASPSAKYNEPQSVFDAPADVAFLCRTSNELTEVEANALVASGCKTVVDGGYRPVSTAAAEVLKKNGIFHVPYRGTM-IGAAIS 597
QYKR + + S G G+LWGG+VPHPE GYG V FA+ + +G+SL GKRC+VTGSGKVAL VA+KL+ GA P+T +D+SG ++E G K +I+ IK ERGAR R YIVAS +AKYN+P+ +FD P D+ F SNE+ A L +GC T+VD GY P + A LKK G+ H P+R T+ IG A++
Sbjct: 246 QYKRTATNLSKHGFGMLWGGSVPHPEVHGYGPVSFAKSFLEARGDSLRGKRCLVTGSGKVALAVADKLVAEGAIPLTLSDTSGFIYEEGGLPSAKLAQISTIKAERGARIGR-YIVASTTAKYNDPEDIFDVPCDLVFPTN-SNEIDAQAAEKLANNGCSTIVDAGYSPTTPEAIASLKKLGVAHCPFRATLAIGNALA 442
BLAST of mRNA_Ecto-sp13_S_contig14659.3566.1 vs. uniprot
Match: F0Y860_AURAN (Uncharacterized protein GDH n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y860_AURAN) HSP 1 Score: 192 bits (488), Expect = 1.190e-55 Identity = 97/199 (48.74%), Postives = 135/199 (67.84%), Query Frame = 1
Query: 4 QYKRMSLDASPIGRGLLWGGAVPHPECAGYGVVYFAEKAMRGQGESLMGKRCIVTGSGKVALHVAEKLLELGATPMTFTDSSGHVFEPEGFDVEKFKKIAKIKQERGARTPRGYIVASPSAKYNEPQSVFDAPADVAFLCRTSNELTEVEANALVASGCKTVVDGGYRPVSTAAAEVLKKNGIFHVPYRGTMI-GAAIS 597
QYKR + + GRG+LWGGA+PHPE GY V+FA+ + +GESL GKRC++TGSGKVAL VAE+LL LGA P+TF+D+SGH++EP+G KF++I+ IK ERGAR R YI+AS +AK+NEP+ ++ P D+ F +V A L +GC VVD GY P + +A KK G+ + P++ ++ G AI+
Sbjct: 203 QYKRTTEHYARHGRGILWGGALPHPEVFGYSAVHFAKHLVESRGESLAGKRCLITGSGKVALAVAERLLALGAVPLTFSDTSGHIYEPDGIAATKFEQISTIKAERGARVGR-YIIASTTAKFNEPEDIYSIPCDIVFPTIRGEIDADVAAR-LADNGCAAVVDAGYAPSTPSAIRAYKKLGMAYGPFKASLAAGTAIA 399
BLAST of mRNA_Ecto-sp13_S_contig14659.3566.1 vs. uniprot
Match: A0A7S3PXE2_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PXE2_9STRA) HSP 1 Score: 189 bits (479), Expect = 8.010e-54 Identity = 97/197 (49.24%), Postives = 131/197 (66.50%), Query Frame = 1
Query: 4 QYKRMSLDASPIGRGLLWGGAVPHPECAGYGVVYFAEKAMRGQGESLMGKRCIVTGSGKVALHVAEKLLELGATPMTFTDSSGHVFEPEGFDVEKFKKIAKIKQERGARTPRGYIVASPSAKYNEPQSVFDAPADVAFLCRTSNELTEVEANALVASGCKTVVDGGYRPVSTAAAEVLKKNGIFHVPYRGTMIGAAI 594
Q+KR+S+ +S GR L A PE G GVV+FA + M+ +G+SL GKRC++ G+GKVA VA KLLE GA P+TF+DSSGHV+EP G D K K I KIK ERGA R Y++AS +A++N+PQ++ D P D+ F C N++TE A L +GC VV+GGY V+ +LKK G+ + P+ TM G+AI
Sbjct: 267 QHKRISIKSSSGGRPFL---AASCPEAPGVGVVHFANEMMKDKGDSLQGKRCLIIGAGKVARSVAAKLLEFGAIPLTFSDSSGHVYEPNGIDQAKLKTIDKIKDERGALLGR-YVIASTTAQFNDPQNILDVPCDLCFPCAAMNDITEEAATKLADNGCMAVVEGGYSTVTPEGRTILKKRGLAYGPHTLTMTGSAI 459
BLAST of mRNA_Ecto-sp13_S_contig14659.3566.1 vs. uniprot
Match: A0A7S2U9C4_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U9C4_9STRA) HSP 1 Score: 187 bits (474), Expect = 6.170e-53 Identity = 99/212 (46.70%), Postives = 138/212 (65.09%), Query Frame = 1
Query: 4 QYKRMSLDASPIGRGLLWGGAVPHPECAGYGVVYFAEKAMRGQGESLMGKRCIVTGSGKVALHVAEKLLELGATPMTFTDSSGHVFEPEGFDVEKFKKIAKIKQERGARTPRGYIVASPSAKYNEPQSVFDAPADVAFLCRTSNELTEVEANALVASGCKTVVDGGYRPVSTAAAEVLKKNGIFHVPYRGTMIGAAIS---GGRELDRNPLK 630
QYKR+S+ +S GR L GA+ PE GY V +FA + M+ + +SL GKRC++ GSGKVA +AEKLLE GA P+TF+D SGH++EP+G D K K I+ IK ERGA R YI+AS SA++NEP+ D P D+ F C N + E N L +GC+ V++GG+ V+ A ++LKK G+ + P+ TM G AI+ GG+ +D L+
Sbjct: 283 QYKRISVKSSAGGRPFLMNGAM-QPEAPGYAVAHFANEMMKHKHDSLQGKRCMIIGSGKVARALAEKLLEYGAIPLTFSDGSGHIYEPDGIDSGKLKTISNIKSERGALLGR-YIIASTSAQFNEPEDKMDIPCDLCFPCGAMNCVDEAAINKLADNGCQGVIEGGHCAVTVAGRKILKKRGLVYGPHTLTMTGDAIAHAIGGKHVDDKMLQ 492 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14659.3566.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig14659.3566.1 >prot_Ecto-sp13_S_contig14659.3566.1 ID=prot_Ecto-sp13_S_contig14659.3566.1|Name=mRNA_Ecto-sp13_S_contig14659.3566.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=211bp MQYKRMSLDASPIGRGLLWGGAVPHPECAGYGVVYFAEKAMRGQGESLMGback to top mRNA from alignment at Ecto-sp13_S_contig14659:3..3359- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig14659.3566.1 ID=mRNA_Ecto-sp13_S_contig14659.3566.1|Name=mRNA_Ecto-sp13_S_contig14659.3566.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3357bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14659:3..3359- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig14659:3..3359- >mRNA_Ecto-sp13_S_contig14659.3566.1 ID=mRNA_Ecto-sp13_S_contig14659.3566.1|Name=mRNA_Ecto-sp13_S_contig14659.3566.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=633bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14659:3..3359- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |