mRNA_Ecto-sp13_S_contig14659.3566.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig14659.3566.1
Unique NamemRNA_Ecto-sp13_S_contig14659.3566.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig14659.3566.1 vs. uniprot
Match: D7G3Q6_ECTSI (Glutamate dehydrogenase 2 (NADP-dependent) n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G3Q6_ECTSI)

HSP 1 Score: 409 bits (1050), Expect = 2.710e-139
Identity = 205/210 (97.62%), Postives = 207/210 (98.57%), Query Frame = 1
Query:    4 QYKRMSLDASPIGRGLLWGGAVPHPECAGYGVVYFAEKAMRGQGESLMGKRCIVTGSGKVALHVAEKLLELGATPMTFTDSSGHVFEPEGFDVEKFKKIAKIKQERGARTPRGYIVASPSAKYNEPQSVFDAPADVAFLCRTSNELTEVEANALVASGCKTVVDGGYRPVSTAAAEVLKKNGIFHVPYRGTMIGAAISGGRELDRNPLKP 633
            QYKRMSLDASPIGRGLLWGGAVPHPECAGYGVVYFAEKAMRG+GESLMGKRCIVTGSGKVALHVAEKLLELGATPMTFTDSSGHVFEPEGFDVEKFKKIAKIKQERGAR  R YIVASPSAKYNEPQSVFDAPADVAFLCRTSNELTEVEANALVASGCKTVVDGGYRPVSTAAAEVLKKNGIFHVPYRGTMIGAAISGGRELDRNPL+P
Sbjct:  272 QYKRMSLDASPIGRGLLWGGAVPHPECAGYGVVYFAEKAMRGRGESLMGKRCIVTGSGKVALHVAEKLLELGATPMTFTDSSGHVFEPEGFDVEKFKKIAKIKQERGARVGR-YIVASPSAKYNEPQSVFDAPADVAFLCRTSNELTEVEANALVASGCKTVVDGGYRPVSTAAAEVLKKNGIFHVPYRGTMIGAAISGGRELDRNPLQP 480          
BLAST of mRNA_Ecto-sp13_S_contig14659.3566.1 vs. uniprot
Match: D8LK56_ECTSI (Glutamate dehydrogenase 1 (NADP-dependent) n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LK56_ECTSI)

HSP 1 Score: 225 bits (573), Expect = 1.240e-67
Identity = 108/208 (51.92%), Postives = 143/208 (68.75%), Query Frame = 1
Query:    4 QYKRMSLDASPIGRGLLWGGAVPHPECAGYGVVYFAEKAMRGQGESLMGKRCIVTGSGKVALHVAEKLLELGATPMTFTDSSGHVFEPEGFDVEKFKKIAKIKQERGARTPRGYIVASPSAKYNEPQSVFDAPADVAFLCRTSNELTEVEANALVASGCKTVVDGGYRPVSTAAAEVLKKNGIFHVPYRGTMIGAAISGGRELDRNPL 627
            QYKR++   +  GRG+LWGGA+P+PE  GYGVV FA   +  +G+SL GKRC++TGSGKVA+HVAEKLL+LGA P+TF+DSSGH++EPEG D  K + I KIK ERGAR  R YI+AS +A+Y EP ++FD P D+AF C   NE+ E  A  L  +GC  V++G   P + AA  V +K G+   P+  T+ G+ I  G  L  NP+
Sbjct:  265 QYKRINDHVAQRGRGVLWGGAMPYPEATGYGVVEFARCMLEDKGDSLKGKRCLITGSGKVAVHVAEKLLQLGAIPLTFSDSSGHIYEPEGIDSAKLRTIVKIKSERGARVGR-YIIASTTAQYTEPANIFDIPCDLAFACSHRNEVDETAATLLADTGCSAVIEGASAPCTKAAKAVFRKRGLLFAPHVATLAGSGIVSGLALATNPV 471          
BLAST of mRNA_Ecto-sp13_S_contig14659.3566.1 vs. uniprot
Match: A0A6V1RCQ3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1RCQ3_HETAK)

HSP 1 Score: 218 bits (555), Expect = 4.970e-65
Identity = 107/208 (51.44%), Postives = 138/208 (66.35%), Query Frame = 1
Query:    4 QYKRMSLDASPIGRGLLWGGAVPHPECAGYGVVYFAEKAMRGQGESLMGKRCIVTGSGKVALHVAEKLLELGATPMTFTDSSGHVFEPEGFDVEKFKKIAKIKQERGARTPRGYIVASPSAKYNEPQSVFDAPADVAFLCRTSNELTEVEANALVASGCKTVVDGGYRPVSTAAAEVLKKNGIFHVPYRGTMIGAAISGGRELDRNPL 627
            QYKR     S +GRGLLWGGA P P C G+GV +FA++ +  +GESL GKRC++TGSGK A  VA KLLE GA P+TF+DSSGH++EP+G D  KFK++AKIK ERGAR  R YI+AS +A+YNEP+ +F  P D+ FLC   NE+    A  +   G   VV+G   P S  A +V KK G+   PYR T+ GA++  G  L  N +
Sbjct:  258 QYKRTHNHISHLGRGLLWGGAPPFPHCTGFGVAHFAQQMLEDKGESLKGKRCLITGSGKNAQAVARKLLEFGAVPLTFSDSSGHIYEPDGLDAVKFKQVAKIKAERGARIGR-YIIASTTARYNEPEDLFGIPCDLVFLCGPMNEVGAAAAQQIADGGALGVVEGCNMPCSPEAIKVFKKRGLLFAPYRATLAGASLVNGTALAHNRI 464          
BLAST of mRNA_Ecto-sp13_S_contig14659.3566.1 vs. uniprot
Match: A0A4D9CY97_9STRA (Glutamate dehydrogenase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CY97_9STRA)

HSP 1 Score: 214 bits (544), Expect = 1.860e-63
Identity = 104/206 (50.49%), Postives = 140/206 (67.96%), Query Frame = 1
Query:    4 QYKRMSLDASPIGRGLLWGGAVPHPECAGYGVVYFAEKAMRGQGESLMGKRCIVTGSGKVALHVAEKLLELGATPMTFTDSSGHVFEPEGFDVEKFKKIAKIKQERGARTPRGYIVASPSAKYNEPQSVFDAPADVAFLCRTSNELTEVEANALVASGCKTVVDGGYRPVSTAAAEVLKKNGIFHVPYRGTMIGAAISGGRELDRN 621
            QYKRMS+  +  G+GLLWGG  P P+    GVV++A + + G+G+SL GKRC++TGSGK+ALHVAEKL+E+GA P+T +D+SGHV+EP+G D  K K I KIK ERGAR  R YI+AS +AKYNEP++VF  PAD+ F C T NE+  V A  L   G + V +G + P +  A  + KK GI H  +  T+   +I  G EL ++
Sbjct:  253 QYKRMSIHHAQKGKGLLWGGVYPFPQATASGVVHWAARVLEGKGDSLEGKRCLITGSGKMALHVAEKLVEMGAVPLTLSDTSGHVYEPDGIDAAKLKTIMKIKSERGARIGR-YIIASTTAKYNEPENVFSVPADLVFPCATHNEIDGVTATMLADMGVQGVFEGSHMPCTNQAISIFKKRGILHGGHVATLAADSIFNGLELSKS 457          
BLAST of mRNA_Ecto-sp13_S_contig14659.3566.1 vs. uniprot
Match: A0A836CHL3_9STRA (Glutamate dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHL3_9STRA)

HSP 1 Score: 207 bits (527), Expect = 3.180e-61
Identity = 101/210 (48.10%), Postives = 139/210 (66.19%), Query Frame = 1
Query:    4 QYKRMSLDASPIGRGLLWGGAVPHPECAGYGVVYFAEKAMRGQGESLMGKRCIVTGSGKVALHVAEKLLELGATPMTFTDSSGHVFEPEGFDVEKFKKIAKIKQERGARTPRGYIVASPSAKYNEPQSVFDAPADVAFLCRTSNELTEVEANALVASGCKTVVDGGYRPVSTAAAEVLKKNGIFHVPYRGTMIGAAISGGRELDRNPLKP 633
            QYKR++   +  GRG+LWGG   +PE  G+GVVYFA + +R +G+SL GKRC+VTGSGK+AL +A KLLELGA P++F+DS+GH+ E +GFD  K + +  IK ERGAR  R YI++S +A++N+P+ +FD PADV F     NE+    A  L  +GC  V++G   P + AA  V +K G+   P+  T+ G  I  G EL  NPL P
Sbjct:  222 QYKRVNDHVAQKGRGVLWGGIPLYPEGVGHGVVYFANEMLRDKGDSLKGKRCLVTGSGKLALSIAGKLLELGAIPISFSDSNGHIVETDGFDAAKLRTVVSIKNERGARLGR-YIISSTTARFNDPECIFDVPADVVFAAAHRNEIDADRAQRLAENGCLAVIEGANSPCTKAAKAVFRKRGVLFGPHMATLAGNGIVSGFELSSNPLLP 430          
BLAST of mRNA_Ecto-sp13_S_contig14659.3566.1 vs. uniprot
Match: A0A7S2RRL7_9STRA (Glutamate dehydrogenase n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RRL7_9STRA)

HSP 1 Score: 195 bits (496), Expect = 7.250e-57
Identity = 95/208 (45.67%), Postives = 134/208 (64.42%), Query Frame = 1
Query:    4 QYKRMSLDASPIGRGLLWGGAVPHPECAGYGVVYFAEKAMRGQGESLMGKRCIVTGSGKVALHVAEKLLELGATPMTFTDSSGHVFEPEGFDVEKFKKIAKIKQERGARTPRGYIVASPSAKYNEPQSVFDAPADVAFLCRTSNELTEVEANALVASGCKTVVDGGYRPVSTAAAEVLKKNGIFHVPYRGTMIGAAISGGRELDRNPL 627
            QYKR+    +  G G LWGG VP     G+GV +FAE+ +R + E+L GKR ++TGSG +AL VAE+LL+ GA P+TF+DSSGH++E +G D  K   I  IK ERGAR  R YIVAS +AKY++P+ +F  P D+   C  S E+T+  A  L+A+GCK +V+GG  P +  A   L++NGI   PY+ T+   A++ G  L  + +
Sbjct:  197 QYKRIKDIGAKQGSGFLWGGRVPWRFAYGHGVAHFAERMLRDKKETLQGKRVLITGSGNIALGVAERLLQFGAIPVTFSDSSGHIYEQDGIDASKLATIKHIKSERGARLGR-YIVASTTAKYSDPEDIFSIPCDICIPCGPSQEVTDSVAQTLIANGCKAIVEGGSSPCTPDAIVTLRRNGILFAPYKATLSAGAVTSGGALQSSSI 403          
BLAST of mRNA_Ecto-sp13_S_contig14659.3566.1 vs. uniprot
Match: A0A7S3ZJ22_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZJ22_9STRA)

HSP 1 Score: 193 bits (491), Expect = 1.060e-55
Identity = 101/199 (50.75%), Postives = 133/199 (66.83%), Query Frame = 1
Query:    4 QYKRMSLDASPIGRGLLWGGAVPHPECAGYGVVYFAEKAMRGQGESLMGKRCIVTGSGKVALHVAEKLLELGATPMTFTDSSGHVFEPEGFDVEKFKKIAKIKQERGARTPRGYIVASPSAKYNEPQSVFDAPADVAFLCRTSNELTEVEANALVASGCKTVVDGGYRPVSTAAAEVLKKNGIFHVPYRGTM-IGAAIS 597
            QYKR + + S  G G+LWGG+VPHPE  GYG V FA+  +  +G+SL GKRC+VTGSGKVAL VA+KL+  GA P+T +D+SG ++E  G    K  +I+ IK ERGAR  R YIVAS +AKYN+P+ +FD P D+ F    SNE+    A  L  +GC T+VD GY P +  A   LKK G+ H P+R T+ IG A++
Sbjct:  246 QYKRTATNLSKHGFGMLWGGSVPHPEVHGYGPVSFAKSFLEARGDSLRGKRCLVTGSGKVALAVADKLVAEGAIPLTLSDTSGFIYEEGGLPSAKLAQISTIKAERGARIGR-YIVASTTAKYNDPEDIFDVPCDLVFPTN-SNEIDAQAAEKLANNGCSTIVDAGYSPTTPEAIASLKKLGVAHCPFRATLAIGNALA 442          
BLAST of mRNA_Ecto-sp13_S_contig14659.3566.1 vs. uniprot
Match: F0Y860_AURAN (Uncharacterized protein GDH n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y860_AURAN)

HSP 1 Score: 192 bits (488), Expect = 1.190e-55
Identity = 97/199 (48.74%), Postives = 135/199 (67.84%), Query Frame = 1
Query:    4 QYKRMSLDASPIGRGLLWGGAVPHPECAGYGVVYFAEKAMRGQGESLMGKRCIVTGSGKVALHVAEKLLELGATPMTFTDSSGHVFEPEGFDVEKFKKIAKIKQERGARTPRGYIVASPSAKYNEPQSVFDAPADVAFLCRTSNELTEVEANALVASGCKTVVDGGYRPVSTAAAEVLKKNGIFHVPYRGTMI-GAAIS 597
            QYKR +   +  GRG+LWGGA+PHPE  GY  V+FA+  +  +GESL GKRC++TGSGKVAL VAE+LL LGA P+TF+D+SGH++EP+G    KF++I+ IK ERGAR  R YI+AS +AK+NEP+ ++  P D+ F         +V A  L  +GC  VVD GY P + +A    KK G+ + P++ ++  G AI+
Sbjct:  203 QYKRTTEHYARHGRGILWGGALPHPEVFGYSAVHFAKHLVESRGESLAGKRCLITGSGKVALAVAERLLALGAVPLTFSDTSGHIYEPDGIAATKFEQISTIKAERGARVGR-YIIASTTAKFNEPEDIYSIPCDIVFPTIRGEIDADVAAR-LADNGCAAVVDAGYAPSTPSAIRAYKKLGMAYGPFKASLAAGTAIA 399          
BLAST of mRNA_Ecto-sp13_S_contig14659.3566.1 vs. uniprot
Match: A0A7S3PXE2_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PXE2_9STRA)

HSP 1 Score: 189 bits (479), Expect = 8.010e-54
Identity = 97/197 (49.24%), Postives = 131/197 (66.50%), Query Frame = 1
Query:    4 QYKRMSLDASPIGRGLLWGGAVPHPECAGYGVVYFAEKAMRGQGESLMGKRCIVTGSGKVALHVAEKLLELGATPMTFTDSSGHVFEPEGFDVEKFKKIAKIKQERGARTPRGYIVASPSAKYNEPQSVFDAPADVAFLCRTSNELTEVEANALVASGCKTVVDGGYRPVSTAAAEVLKKNGIFHVPYRGTMIGAAI 594
            Q+KR+S+ +S  GR  L   A   PE  G GVV+FA + M+ +G+SL GKRC++ G+GKVA  VA KLLE GA P+TF+DSSGHV+EP G D  K K I KIK ERGA   R Y++AS +A++N+PQ++ D P D+ F C   N++TE  A  L  +GC  VV+GGY  V+     +LKK G+ + P+  TM G+AI
Sbjct:  267 QHKRISIKSSSGGRPFL---AASCPEAPGVGVVHFANEMMKDKGDSLQGKRCLIIGAGKVARSVAAKLLEFGAIPLTFSDSSGHVYEPNGIDQAKLKTIDKIKDERGALLGR-YVIASTTAQFNDPQNILDVPCDLCFPCAAMNDITEEAATKLADNGCMAVVEGGYSTVTPEGRTILKKRGLAYGPHTLTMTGSAI 459          
BLAST of mRNA_Ecto-sp13_S_contig14659.3566.1 vs. uniprot
Match: A0A7S2U9C4_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U9C4_9STRA)

HSP 1 Score: 187 bits (474), Expect = 6.170e-53
Identity = 99/212 (46.70%), Postives = 138/212 (65.09%), Query Frame = 1
Query:    4 QYKRMSLDASPIGRGLLWGGAVPHPECAGYGVVYFAEKAMRGQGESLMGKRCIVTGSGKVALHVAEKLLELGATPMTFTDSSGHVFEPEGFDVEKFKKIAKIKQERGARTPRGYIVASPSAKYNEPQSVFDAPADVAFLCRTSNELTEVEANALVASGCKTVVDGGYRPVSTAAAEVLKKNGIFHVPYRGTMIGAAIS---GGRELDRNPLK 630
            QYKR+S+ +S  GR  L  GA+  PE  GY V +FA + M+ + +SL GKRC++ GSGKVA  +AEKLLE GA P+TF+D SGH++EP+G D  K K I+ IK ERGA   R YI+AS SA++NEP+   D P D+ F C   N + E   N L  +GC+ V++GG+  V+ A  ++LKK G+ + P+  TM G AI+   GG+ +D   L+
Sbjct:  283 QYKRISVKSSAGGRPFLMNGAM-QPEAPGYAVAHFANEMMKHKHDSLQGKRCMIIGSGKVARALAEKLLEYGAIPLTFSDGSGHIYEPDGIDSGKLKTISNIKSERGALLGR-YIIASTSAQFNEPEDKMDIPCDLCFPCGAMNCVDEAAINKLADNGCQGVIEGGHCAVTVAGRKILKKRGLVYGPHTLTMTGDAIAHAIGGKHVDDKMLQ 492          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14659.3566.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G3Q6_ECTSI2.710e-13997.62Glutamate dehydrogenase 2 (NADP-dependent) n=2 Tax... [more]
D8LK56_ECTSI1.240e-6751.92Glutamate dehydrogenase 1 (NADP-dependent) n=2 Tax... [more]
A0A6V1RCQ3_HETAK4.970e-6551.44Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A4D9CY97_9STRA1.860e-6350.49Glutamate dehydrogenase n=2 Tax=Monodopsidaceae Ta... [more]
A0A836CHL3_9STRA3.180e-6148.10Glutamate dehydrogenase n=1 Tax=Tribonema minus Ta... [more]
A0A7S2RRL7_9STRA7.250e-5745.67Glutamate dehydrogenase n=2 Tax=Rhizochromulina ma... [more]
A0A7S3ZJ22_9STRA1.060e-5550.75Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
F0Y860_AURAN1.190e-5548.74Uncharacterized protein GDH n=1 Tax=Aureococcus an... [more]
A0A7S3PXE2_9STRA8.010e-5449.24Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7S2U9C4_9STRA6.170e-5346.70Hypothetical protein n=1 Tax=Attheya septentrional... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14659contigEcto-sp13_S_contig14659:3..3359 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score411.0
Seed ortholog evalue3.4e-112
Seed eggNOG ortholog2880.D7G3Q6
Model size633
KEGG rclassRC00006,RC02799
KEGG koko:K00262
KEGG ReactionR00248
KEGG Pathwayko00220,ko00250,ko00910,ko01100,map00220,map00250,map00910,map01100
Hectar predicted targeting categoryother localisation
Exons6
EggNOG free text desc.glutamate dehydrogenase [NAD(P) ] activity
EggNOG OGsCOG0334@1,KOG2250@2759
EC1.4.1.4
Cds size633
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14659.3566.1prot_Ecto-sp13_S_contig14659.3566.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig14659 3..3359 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462782.4606493-CDS-Ecto-sp13_S_contig14659:2..1041681462782.4606493-CDS-Ecto-sp13_S_contig14659:2..104Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14659 3..104 -
1681462782.471243-CDS-Ecto-sp13_S_contig14659:1081..12711681462782.471243-CDS-Ecto-sp13_S_contig14659:1081..1271Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14659 1082..1271 -
1681462782.4804683-CDS-Ecto-sp13_S_contig14659:1908..19191681462782.4804683-CDS-Ecto-sp13_S_contig14659:1908..1919Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14659 1909..1919 -
1681462782.4900718-CDS-Ecto-sp13_S_contig14659:1973..20331681462782.4900718-CDS-Ecto-sp13_S_contig14659:1973..2033Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14659 1974..2033 -
1681462782.5013084-CDS-Ecto-sp13_S_contig14659:2454..25441681462782.5013084-CDS-Ecto-sp13_S_contig14659:2454..2544Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14659 2455..2544 -
1681462782.5115914-CDS-Ecto-sp13_S_contig14659:3179..33591681462782.5115914-CDS-Ecto-sp13_S_contig14659:3179..3359Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14659 3180..3359 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig14659.3566.1

>prot_Ecto-sp13_S_contig14659.3566.1 ID=prot_Ecto-sp13_S_contig14659.3566.1|Name=mRNA_Ecto-sp13_S_contig14659.3566.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=211bp
MQYKRMSLDASPIGRGLLWGGAVPHPECAGYGVVYFAEKAMRGQGESLMG
KRCIVTGSGKVALHVAEKLLELGATPMTFTDSSGHVFEPEGFDVEKFKKI
AKIKQERGARTPRGYIVASPSAKYNEPQSVFDAPADVAFLCRTSNELTEV
EANALVASGCKTVVDGGYRPVSTAAAEVLKKNGIFHVPYRGTMIGAAISG
GRELDRNPLKP
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mRNA from alignment at Ecto-sp13_S_contig14659:3..3359-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig14659.3566.1 ID=mRNA_Ecto-sp13_S_contig14659.3566.1|Name=mRNA_Ecto-sp13_S_contig14659.3566.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3357bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14659:3..3359- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCAGTACAAGCGCATGAGCCTTGACGCGTCTCCGATCGGAAGGGGCCT CCTGTGGGGCGGCGCTGTTCCCCACCCGGAGTGTGCGGGCTACGGCGTGG TTTACTTCGCGGAGAAGGCGATGCGAGGCCAGGGCGAGTCGCTCATGGGA AAGCGGTGCATCGTTACGGGAAGCGGGAAGGTGACCGATAGGTTCGGAGC TGCGTGGCACGCGCAACCAGCTAGTTTCGCGAGCGCACGTGCGTGTCTGG TCCCATTTATTCTCGAGCCCCATTCTATGCATAGTAATGGCTCATACGTT TGATGCACCAGCAGGGTCACACAAGAGGAAATTAGTGCTCAGTACTTGTT TAAGATGACGTTCATACGAGGTCCTGCGGGATGGTCCGTATTGATCTCTT GGGTCTCGAGTTTCCGGTTTCGTGTTTTCGGTTAGCATGTTTATTGTTGT TGCCGATAAGCAGGATATTTTCTGCAAATGCGGGTTCGGACTTGTGAATG ACGGCTCCGAGGTGTGAATGACGGCTCCGAGGGACCCGATGTGTCGTGCT GGTGTGCCAGCCGAGTCTTGGTGCAGTGGACACAGCACGTGTGTGTCTGC GCTGTTGCATATCCTCTCCGCGGGTCGTCATGCGACGGGCGAACCCTTTT TAAACGCTGAGCTGTGACGTGGCAAGCATTTGTTGTGCGGTGTACATGCA CGCGACATGTGGTTCAATATTTCAATGCTCTGAGCCACTTTCATGCGCTG AGCCCTTGTGAGGTACCTCTGTGTGACGTGCCGAAGACGTGATGGGTTTT CGTCGTGCAATAAAGGTGGCCCTGCATGTCGCGGAGAAACTTCTCGAGCT GGGTGCCACTCCGATGACGTTCACGGACAGCAGTGGACACGTCTTCGAGC CAGAGGTGAGACGTACCTACCGCTGCTGGCGATGTTATTTTCGTGCAGTC GTATTGATTCTAATGTTAATGATTCCTTGAAAGACGATGATACCTTTACG ATCGCCCTTTGCGCCCAAGTTTCAAGAGGAAACAATTTAAAATATAACAC AAGAGCAAACCGACCAAGGCAACATAACCACAGCAACGAAGACACCTTCG CGCCGAAAGCCTGCCGTACTTGTAGCCGTGACCACGAGTGGGTACTGGCC CTTCTGACTAGTCTACGCGGTGAGTTTTGTTGAGACAACGTCACAGGAAC AAGAAAATGAACGGAACAACACCGCCAGCCGACGCGGCTCGGTAAGGCCC GTGTACGGACAACGTTGCTGTATGTCAAGTCACGGTAACAACCACACGCT GCTTCCTTTTGCTACCACCGCGTCAGGGTTTCGACGTCGAGAAGTTCAAG AAAATCGCCAAGATTAAGCAGGAGAGAGGAGCACGAGTTGGAAGGCAAGG CCTCTACTCGATCACTGCCATTGTGATGGCTGCACACGAGACCCCAAGGG GGTTTGTTTGACGATCTAAAATGGGTGAACTTGGTCCGGAACATATGGAA AGCCCGACGTGATCTGCAGTAATATCTCCTTGGAAGTGACGTCATAACCA TTGTTGTTGGCTTGAGTTGAGGTAGCATTCCAATCACATGCTCTTTTTCA GCGCCATCCGGAATCCGATGATACTTGCGCCGCCCTCTTGGCCCGCGTTG ATCGCATTGCTGTTGACACCCGTCTTCACCGCGGGTGGCGGTGCATCCAC ACGCCGACCCACGATCGATGTTGACTTCCAATCCAACCCCGAGATTTATC AACCCCATGCCAGGATGAGCCCGGCACCGAAAATGAGCCACGTGTATTCC GGTATCGCTGCTCGCTCAAAAAAACTGGTATCAACCTTCCACAATGTCTA TCCGTACCACTACCTTGCGGTGGCGTTGATCTAGCCAGACTAGCATACTT TTTCGTGTTTATCGTCCGACACTCTTGTCCAGAGTTGTCCCATGCCTTTA AATGGGTAGTTTTTCCTAAGGCACGCATTTGAAAAGGGAAATCATGCCCA CGCTGCTGGTGTCGCACCCACTAGTAGCAGCGACAGCGGCGTTTTGACTT GTCTTGTCTCGTCTTTTTTTTTGTTCGCTTGCCGTCAGGTACATCGTCGC TTCCCCCTCAGCCAAGTACAACGAGCCGCAGTCGGTGTTTGACGCACCGG CAGACGTGGCATTCCTCTGCAGGACCTCCAACGAGCTTACCGAAGTGGAG GCAAATGCGCTGGTCGCGAGCGGCTGCAAGACCGTCGTTGACGGGGGGTA CCGGCCCGTGTCGACGGCTGCGGCTGAGGTGTGGACGTATGCTACTGCTG CTGTTGCTGTGGTCGTTATTGTTGTTGGTGGTTGTTGGATGTGGTGGTGG TTCATGTTTGTCCTCCCTCATGCATAAAAAATACTACTTGGAGCCTTAGC TTTTTTGTCTTTGTTTCTTCGTTGTTGTCGACGTCTGCCCTCGTAGACAC CTGTTTAAAGCTATGCGATTCAGAAAAAAATTATCGCACGTATGCATGAG ATGGATTTAAGACGGAGATTTCACACTATCGAGAAAATGATCAGCTACCG CTTGAGAAAATGATCAGCTACCGCTTGGTTGAAACTGTTGGAAAGTGGTG GTCTCCCTGTCGGAACATGATGCCACCTCACGCTGGCACGTATCCCCAGT GCAAGCCAGCCTTACACCTACTATCCATGTTGCGCTGACCTCACATGACC CGGCTGTGTTCGGGTAGGGTTAGGGTTTATTCAGACCAGGGTTCAAATGG ACTTATCTTGTCTTGCTGTGTCGATTTTTTTGTTGGATAAGAGTCGAAAG GATGCCTGAGCATGGTGCTTCTAAACAAGACAGGATGGGCGTTCACGCAA CCAAGGACGCTTGGCAGCGCCGAAACAATGGTGCTTGTTCGATGTATTGC GGTTTTGACAACAAAGTATTAAACACCAAAACCAACCCAGGGACAGCTCA GGTTTCGGCCGCTCCAAAGCGGTTTGGCTTGCTTGCTTTAGCTGTCCAGA GCGATTGCTGCCGCGAGATTGTCAAGAACCACGCCTCCGTTCTAGGACAC GCGTGAGAAACACCCAGAGACGCTCTTCGGCATCCTGGTCAACCCGCTCT TGTCTCGCCAAGATCGCATGGCCCTTTCAACCTAGTGTGCTCCCCTGCAC AGATCCTCGACACTTCCTCGACGAAACCCTTAACTCGGGCCGCTGCTTGC TCTCTCCCGCCCCGACTTCATCGTCCCACTTCGTCCATCTTGGAACGGTT CTCAGGTTCTTAAGAAGAACGGGATTTTCCACGTGCCATACCGCGGGACC ATGATTGGCGCCGCCATCAGCGGCGGAAGGGAGTTAGACCGCAACCCTCT TAAGCCC
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig14659:3..3359-

>mRNA_Ecto-sp13_S_contig14659.3566.1 ID=mRNA_Ecto-sp13_S_contig14659.3566.1|Name=mRNA_Ecto-sp13_S_contig14659.3566.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=633bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14659:3..3359- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCAGTACAAGCGCATGAGCCTTGACGCGTCTCCGATCGGAAGGGGCCT
CCTGTGGGGCGGCGCTGTTCCCCACCCGGAGTGTGCGGGCTACGGCGTGG
TTTACTTCGCGGAGAAGGCGATGCGAGGCCAGGGCGAGTCGCTCATGGGA
AAGCGGTGCATCGTTACGGGAAGCGGGAAGGTGGCCCTGCATGTCGCGGA
GAAACTTCTCGAGCTGGGTGCCACTCCGATGACGTTCACGGACAGCAGTG
GACACGTCTTCGAGCCAGAGGGTTTCGACGTCGAGAAGTTCAAGAAAATC
GCCAAGATTAAGCAGGAGAGAGGAGCACGAACCCCAAGGGGGTACATCGT
CGCTTCCCCCTCAGCCAAGTACAACGAGCCGCAGTCGGTGTTTGACGCAC
CGGCAGACGTGGCATTCCTCTGCAGGACCTCCAACGAGCTTACCGAAGTG
GAGGCAAATGCGCTGGTCGCGAGCGGCTGCAAGACCGTCGTTGACGGGGG
GTACCGGCCCGTGTCGACGGCTGCGGCTGAGGTTCTTAAGAAGAACGGGA
TTTTCCACGTGCCATACCGCGGGACCATGATTGGCGCCGCCATCAGCGGC
GGAAGGGAGTTAGACCGCAACCCTCTTAAGCCC
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