mRNA_Ecto-sp13_S_contig14653.3563.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig14653.3563.1 vs. uniprot
Match: D7FM01_ECTSI (Sedoheptulose-bisphosphatase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FM01_ECTSI) HSP 1 Score: 203 bits (516), Expect = 1.550e-63 Identity = 103/105 (98.10%), Postives = 105/105 (100.00%), Query Frame = 1
Query: 1 RYTLRYTGGMVPDVYHILIKSKGVFSNVSSAAAKAKLRLLYECAPIALLIEAAGGASVIAPSPGAASGGTPLSVLDVEIDNLDKRLGLCLGGKEEVDVFNRFMFG 315
RYTLRYTGGMVPDVYHILIK+KGVFSNVSSAAAKAKLRLLYECAPIALLIEAAGGASV+APSPGAASGGTPLSVLDVEIDNLDKRLGLCLGGKEEVDVFNRFMFG
Sbjct: 187 RYTLRYTGGMVPDVYHILIKNKGVFSNVSSAAAKAKLRLLYECAPIALLIEAAGGASVMAPSPGAASGGTPLSVLDVEIDNLDKRLGLCLGGKEEVDVFNRFMFG 291
BLAST of mRNA_Ecto-sp13_S_contig14653.3563.1 vs. uniprot
Match: A0A7S3US16_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3US16_HETAK) HSP 1 Score: 141 bits (355), Expect = 4.420e-41 Identity = 72/109 (66.06%), Postives = 84/109 (77.06%), Query Frame = 1
Query: 1 RYTLRYTGGMVPDVYHILIKSKGVFSNVSSAAAKAKLRLLYECAPIALLIEAAGGASVIAP----SPGAASGGTPLSVLDVEIDNLDKRLGLCLGGKEEVDVFNRFMFG 315
RYTLRYTGG+VPD+YHIL K KGVF+NVSS +A AKLRLLYECAPIALL+EAAGGAS +AP +P G SVLD + +LD+R+G+C GG EEV F RFMFG
Sbjct: 30 RYTLRYTGGLVPDIYHILTKGKGVFANVSSPSAIAKLRLLYECAPIALLVEAAGGASCLAPPPDYNPDEGPGAGVSSVLDAAVSDLDRRVGVCYGGAEEVAAFRRFMFG 138
BLAST of mRNA_Ecto-sp13_S_contig14653.3563.1 vs. uniprot
Match: A0A835YXX8_9STRA (Sedoheptulose-bisphosphatase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXX8_9STRA) HSP 1 Score: 139 bits (350), Expect = 5.020e-38 Identity = 73/113 (64.60%), Postives = 83/113 (73.45%), Query Frame = 1
Query: 1 RYTLRYTGGMVPDVYHILIKSKGVFSNVSSAAAKAKLRLLYECAPIALLIEAAGGASVIAPSPGAASGG---------TPLSVLDVEIDNLDKRLGLCLGGKEEVDVFNRFMF 312
RYTLRYTGGMVPDVY+ L+K KGVF+NV S +A AKLRLLYECAPIALL+EAAGG SV+AP+PG P SVLDV D +D RLG+C GG +EV FNRFMF
Sbjct: 227 RYTLRYTGGMVPDVYYSLVKGKGVFANVPSPSAPAKLRLLYECAPIALLVEAAGGRSVVAPAPGXXXXXXXXXXXXXXAPQSVLDVVADGMDVRLGVCYGGVDEVATFNRFMF 339
BLAST of mRNA_Ecto-sp13_S_contig14653.3563.1 vs. uniprot
Match: A0A7S2UUN7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UUN7_9STRA) HSP 1 Score: 139 bits (350), Expect = 6.450e-38 Identity = 72/117 (61.54%), Postives = 87/117 (74.36%), Query Frame = 1
Query: 1 RYTLRYTGGMVPDVYHILIKSKGVFSNVSSAAAKAKLRLLYECAPIALLIEAAGGASVIAPS-PGAASGG------------TPLSVLDVEIDNLDKRLGLCLGGKEEVDVFNRFMF 312
RYTLRY+GG+VPDVYHI IKSKG+ +NVSSA A+AKLRLLYECAP+ LL+EAAGGA+ I P P S TP+S+LDV IDNLDKR+G+C G EEVD++ RF+F
Sbjct: 237 RYTLRYSGGLVPDVYHIFIKSKGILTNVSSATAQAKLRLLYECAPVGLLVEAAGGATCIQPPFPPLPSEDXXXXXXXXXXPITPISILDVPIDNLDKRVGVCYGSTEEVDIYKRFLF 353
BLAST of mRNA_Ecto-sp13_S_contig14653.3563.1 vs. uniprot
Match: A0A8J1ZBM4_9DINO (Fructose-bisphosphatase n=1 Tax=Amoebophrya sp. A25 TaxID=1410381 RepID=A0A8J1ZBM4_9DINO) HSP 1 Score: 128 bits (322), Expect = 4.780e-34 Identity = 66/104 (63.46%), Postives = 78/104 (75.00%), Query Frame = 1
Query: 1 RYTLRYTGGMVPDVYHILIKSKGVFSNVSSAAAKAKLRLLYECAPIALLIEAAGGASVIAPSPGAASGGTPLSVLDVEIDNLDKRLGLCLGGKEEVDVFNRFMF 312
RYTLRYTGGMVPDVYHIL K KGVFSN SSA AKAKLRLLYECAPIA ++EAAGG S++ P +A P SVLDV + LD+R+G+ G E+++F MF
Sbjct: 218 RYTLRYTGGMVPDVYHILFKGKGVFSNCSSAGAKAKLRLLYECAPIAFIVEAAGGKSLVDPMFASA----PQSVLDVAVAALDQRIGVAYGSSAEIELFQTHMF 317
BLAST of mRNA_Ecto-sp13_S_contig14653.3563.1 vs. uniprot
Match: A0A8J1VZP9_9DINO (Hypothetical protein n=1 Tax=Amoebophrya sp. A120 TaxID=2202890 RepID=A0A8J1VZP9_9DINO) HSP 1 Score: 128 bits (322), Expect = 4.880e-34 Identity = 64/104 (61.54%), Postives = 79/104 (75.96%), Query Frame = 1
Query: 1 RYTLRYTGGMVPDVYHILIKSKGVFSNVSSAAAKAKLRLLYECAPIALLIEAAGGASVIAPSPGAASGGTPLSVLDVEIDNLDKRLGLCLGGKEEVDVFNRFMF 312
+YTLRYTGGMVPDVYHIL K KG+F+N SS AKAKLRLLYECAPIA L+E AGGAS++ P+ A P SVL++ LD+R+G+ GGKEEVD+ + +F
Sbjct: 220 KYTLRYTGGMVPDVYHILFKGKGIFTNCSSPGAKAKLRLLYECAPIAFLVERAGGASLVDPAFSA----VPQSVLEIAAQELDQRIGVVYGGKEEVDLCQKHLF 319
BLAST of mRNA_Ecto-sp13_S_contig14653.3563.1 vs. uniprot
Match: A0A482S7V3_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S7V3_9ARCH) HSP 1 Score: 127 bits (319), Expect = 1.360e-33 Identity = 64/104 (61.54%), Postives = 80/104 (76.92%), Query Frame = 1
Query: 1 RYTLRYTGGMVPDVYHILIKSKGVFSNVSSAAAKAKLRLLYECAPIALLIEAAGGASVIAPSPGAASGGTPLSVLDVEIDNLDKRLGLCLGGKEEVDVFNRFMF 312
+YTLRY+GG+VPDVYHI IK G+ SN SS AAKAKLRLLYECAPIAL++EAAGG S + S A P+S+LDV + +LDKR+G+C G KEEV+ F ++F
Sbjct: 218 KYTLRYSGGLVPDVYHIFIKQGGILSNASSKAAKAKLRLLYECAPIALIVEAAGGMSCVCSSE-ANEHCEPVSLLDVAVTDLDKRVGVCYGSKEEVERFKSYIF 320
BLAST of mRNA_Ecto-sp13_S_contig14653.3563.1 vs. uniprot
Match: A0A7S0C0C6_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C0C6_9STRA) HSP 1 Score: 126 bits (316), Expect = 3.790e-33 Identity = 66/104 (63.46%), Postives = 77/104 (74.04%), Query Frame = 1
Query: 1 RYTLRYTGGMVPDVYHILIKSKGVFSNVSSAAAKAKLRLLYECAPIALLIEAAGGASVIAPSPGAASGGTPLSVLDVEIDNLDKRLGLCLGGKEEVDVFNRFMF 312
RYTLRYTGGMVPD+YHIL K KGVF+NVSS A AKLRLLYE API L+IE AGG +V G +SVLD+ I++LD+RLGLCLG +EVD + FMF
Sbjct: 220 RYTLRYTGGMVPDIYHILCKGKGVFTNVSSNVAPAKLRLLYEVAPIGLIIELAGGKTVHESREG-------VSVLDITIEDLDQRLGLCLGSTDEVDTYVNFMF 316
BLAST of mRNA_Ecto-sp13_S_contig14653.3563.1 vs. uniprot
Match: K8YYP4_NANGC (Sedoheptulose-bisphosphatase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8YYP4_NANGC) HSP 1 Score: 121 bits (304), Expect = 2.650e-31 Identity = 63/104 (60.58%), Postives = 77/104 (74.04%), Query Frame = 1
Query: 1 RYTLRYTGGMVPDVYHILIKSKGVFSNVSSAAAKAKLRLLYECAPIALLIEAAGGASVIAPSPGAASGGTPLSVLDVEIDNLDKRLGLCLGGKEEVDVFNRFMF 312
RYTLRYTGG+VPDVYH+LIK KGV +NV SAAAKAKLRLLYE APIAL++E AG AS AP P P+S+LD+ I L+ + G+ GG EEV +F + M+
Sbjct: 225 RYTLRYTGGLVPDVYHVLIKGKGVVTNVVSAAAKAKLRLLYEAAPIALVMECAGAASCTAPGPNGEHP-EPISILDLPIMGLEFKCGVAYGGVEEVAIFKKLMY 327
BLAST of mRNA_Ecto-sp13_S_contig14653.3563.1 vs. uniprot
Match: A0A7R9VKH4_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VKH4_9STRA) HSP 1 Score: 121 bits (304), Expect = 5.180e-31 Identity = 63/103 (61.17%), Postives = 75/103 (72.82%), Query Frame = 1
Query: 1 RYTLRYTGGMVPDVYHILIKSKGVFSNVSSAAAKAKLRLLYECAPIALLIEAAGGASVIAPSPGAASGGTPLSVLDVEIDNLDKRLGLCLGGKEEVDVFNRFM 309
RYTLRY+GGMVPDVYH+ KSKGVFSNVSS A+AKLRLLYE API L++E AGG + G SVLD ID+LD+RLG+C G +EEV+ + RFM
Sbjct: 272 RYTLRYSGGMVPDVYHMFAKSKGVFSNVSSEKARAKLRLLYEVAPIGLIVECAGGMTTHEAHDG--------SVLDEVIDDLDRRLGVCFGSREEVEKYKRFM 366 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14653.3563.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig14653.3563.1 >prot_Ecto-sp13_S_contig14653.3563.1 ID=prot_Ecto-sp13_S_contig14653.3563.1|Name=mRNA_Ecto-sp13_S_contig14653.3563.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=97bp MVPDVYHILIKSKGVFSNVSSAAAKAKLRLLYECAPIALLIEAAGGASVIback to top mRNA from alignment at Ecto-sp13_S_contig14653:2..812+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig14653.3563.1 ID=mRNA_Ecto-sp13_S_contig14653.3563.1|Name=mRNA_Ecto-sp13_S_contig14653.3563.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=811bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14653:2..812+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig14653:2..812+ >mRNA_Ecto-sp13_S_contig14653.3563.1 ID=mRNA_Ecto-sp13_S_contig14653.3563.1|Name=mRNA_Ecto-sp13_S_contig14653.3563.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=291bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14653:2..812+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |