mRNA_Ecto-sp13_S_contig14652.3562.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig14652.3562.1 vs. uniprot
Match: D7FY61_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FY61_ECTSI) HSP 1 Score: 256 bits (653), Expect = 4.630e-86 Identity = 129/134 (96.27%), Postives = 133/134 (99.25%), Query Frame = 1
Query: 1 MELAAELSAARNAPGARQTAWMLNGIRTEVVVIPYADRTFVIVTQMKKLGNLLMATSDAAGGMMAGSGGRRYSVQVLLGRRDDPLLCLYARQMLEQMKSDKPLLLAVCLKEEGRDTKTFQEVINQILSLGGWGG 402
MELAA++SAARNAPGARQTAWML+GIRTEVVVIPYADRTFVIVTQMKKLGNLLMATSDAAGGMMAGSGGRRYSVQVLLGRRDDPLLCLYARQMLEQMKSDKPLLLAVCLKEEGRDTKTFQEVINQ+LSLGGW G
Sbjct: 1 MELAADMSAARNAPGARQTAWMLSGIRTEVVVIPYADRTFVIVTQMKKLGNLLMATSDAAGGMMAGSGGRRYSVQVLLGRRDDPLLCLYARQMLEQMKSDKPLLLAVCLKEEGRDTKTFQEVINQVLSLGGWSG 134
BLAST of mRNA_Ecto-sp13_S_contig14652.3562.1 vs. uniprot
Match: A0A835ZGZ8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGZ8_9STRA) HSP 1 Score: 130 bits (326), Expect = 1.630e-36 Identity = 65/114 (57.02%), Postives = 88/114 (77.19%), Query Frame = 1
Query: 49 RQTAWMLNGIRTEVVVIPYADRTFVIVTQMKKLGNLLMATSDAAGGMMAGSGGRRYSVQVLLGRRDDPLLCLYARQMLEQMKSDKPLLLAVCLKEEGRDTKTFQEVINQILSLG 390
RQ A L+GI TE+VV ++DRT V VTQ++K+G +L+ TS+A+G GGR ++V+ LLGRRDDPLL +YARQ+ EQM+ D PLLLA+ LKEEGRD+ TF V+N++L+LG
Sbjct: 6 RQGALELHGITTEIVVQSFSDRTMVNVTQLEKMGTMLLVTSEASG-----MGGRSFNVKTLLGRRDDPLLLVYARQLAEQMRLDHPLLLAIALKEEGRDSATFAAVVNKVLALG 114
BLAST of mRNA_Ecto-sp13_S_contig14652.3562.1 vs. uniprot
Match: A0A7S2V894_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V894_9STRA) HSP 1 Score: 114 bits (285), Expect = 5.030e-30 Identity = 58/118 (49.15%), Postives = 85/118 (72.03%), Query Frame = 1
Query: 52 QTAWMLNGIRTEVVVIPYADRTFVIVTQMKKLGNLLMATSDAAGGMMAGSGGRR----YSVQVLLGRRDDPLLCLYARQMLEQMKS--DKPLLLAVCLKEEGRDTKTFQEVINQILSL 387
Q+A ++NGI+TE++V+ +AD+ F+IVTQ+KK+G L+ + S G R Y VLLGRRDDPLL +YARQ++E++ S +KPLLL + LK EGRDT+TFQEV+N+++ +
Sbjct: 17 QSALVINGIKTEILVMYFADKIFIIVTQLKKIGTLVHVQPGNEATSVGASMGDRPLGIYDTSVLLGRRDDPLLLIYARQIMEKICSTLNKPLLLGIALKNEGRDTETFQEVLNELIKM 134
BLAST of mRNA_Ecto-sp13_S_contig14652.3562.1 vs. uniprot
Match: A0A7S2B7E1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B7E1_9STRA) HSP 1 Score: 113 bits (282), Expect = 1.010e-29 Identity = 57/113 (50.44%), Postives = 82/113 (72.57%), Query Frame = 1
Query: 49 RQTAWMLNGIRTEVVVIPYADRTFVIVTQMKKLGNLLMATSDAAGGMMAGSGGRRYSVQVLLGRRDDPLLCLYARQMLEQMKS---DKPLLLAVCLKEEGRDTKTFQEVINQI 378
RQTA +++GI T++VV +ADR FV VTQ++K+G +L A S+ + G +R+ + L+GRRDDPLL LYARQ++EQ+ DKPLLLA+ LK+EGR++ TFQ +IN +
Sbjct: 17 RQTAAIIDGIHTDIVVQSFADRVFVTVTQIQKIGTMLFAVSEDSS-----MGEKRFDISTLVGRRDDPLLTLYARQLIEQIAKTGCDKPLLLAISLKDEGRESSTFQAIINIV 124
BLAST of mRNA_Ecto-sp13_S_contig14652.3562.1 vs. uniprot
Match: A0A7S2F3L5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F3L5_9STRA) HSP 1 Score: 112 bits (280), Expect = 4.050e-29 Identity = 57/127 (44.88%), Postives = 85/127 (66.93%), Query Frame = 1
Query: 22 SAARNAPGARQTAWMLNGIRTEVVVIPYADRTFVIVTQMKKLGNLLMATSDAAGGMMAGSGGRRYSVQVLLGRRDDPLLCLYARQMLEQMK--SDKPLLLAVCLKEEGRDTKTFQEVINQILSLGGW 396
SA ++ +RQTA +NG+ T+++V + DR FVI+TQ+KK+G L+ A ++ G R ++ VLLGRRDDPL+ +YARQM+EQ+ S PLL++V + EGRD +TF+ +IN +L L W
Sbjct: 27 SAVKSCFRSRQTAMKINGVHTDIIVQVFQDRIFVIITQIKKIGTLVYAVAEETS-----MGSRTFTANVLLGRRDDPLVLIYARQMIEQISATSSLPLLMSVSMTPEGRDARTFETIINVVLKLKCW 148
BLAST of mRNA_Ecto-sp13_S_contig14652.3562.1 vs. uniprot
Match: A0A7S1TQ84_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TQ84_9STRA) HSP 1 Score: 95.5 bits (236), Expect = 1.360e-22 Identity = 52/123 (42.28%), Postives = 75/123 (60.98%), Query Frame = 1
Query: 40 PGARQTAWMLNGIRTEVVVIPYADRTFVIVTQMKKLGNLLMATSDAAGGMMAGSGGRRYSVQVLLGRRDDPLLCLYARQMLEQMKS----DKPLLLAVCLKEEGRDTKTFQEVINQILSLGGW 396
P R+ + GI TE+VV + D FV++TQ+KKLG L+M + +G + +VLLG+RDDPLL LYARQ+ EQ+ + D+ ++L++ LKE+GR FQE IN +L L W
Sbjct: 21 PQTRRKVVDIGGIETEIVVQGFQDAIFVVITQLKKLGTLIMTHIERGR-----TGKCLFDARVLLGKRDDPLLVLYARQIAEQISTRTTYDRNVVLSIALKEDGRGPAAFQETINHVLDLPVW 138
BLAST of mRNA_Ecto-sp13_S_contig14652.3562.1 vs. uniprot
Match: A0A482SY11_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SY11_9ARCH) HSP 1 Score: 86.3 bits (212), Expect = 2.810e-19 Identity = 47/99 (47.47%), Postives = 68/99 (68.69%), Query Frame = 1
Query: 91 VVIPYADRTFVIVTQMKKLGNLLMATSDAAGGMMAGSGGRRYSVQVLLGRRDDPLLCLYARQMLEQMK--SDKPLLLAVCLKEEGRDTKTFQEVINQIL 381
V+I ++ FVI+TQ+ K+G++L A ++ GG R+ V+ +LGRRDDPLL LYARQ++E++ S K L+LAV LKEEGR + FQ VIN+ +
Sbjct: 11 VLIVFSSNVFVIITQINKVGSMLKAWTEPKF-----DGGLRFMVENMLGRRDDPLLVLYARQLIERISIISPKQLILAVSLKEEGRGKEHFQNVINRTM 104
BLAST of mRNA_Ecto-sp13_S_contig14652.3562.1 vs. uniprot
Match: A0A7S0CAB8_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CAB8_9STRA) HSP 1 Score: 82.8 bits (203), Expect = 1.350e-17 Identity = 50/123 (40.65%), Postives = 75/123 (60.98%), Query Frame = 1
Query: 64 MLNGIRTEVVVIPYADRTFVIVTQMKKLGNLL---MATSDAAGGMMAGSGGRRYSVQVLLGRRDDPLLCLYARQMLEQMKS-DK-----------PLLLAVCLKEEGRDTKTFQEVINQILSL 387
++N I TE+++ ++DRTFV++TQ+ K+GNLL + TSD + Y V LLG R+D LL +YAR +LE++ DK PLLL + LK+EGR T+ FQ +I Q++S+
Sbjct: 19 LVNQIHTEIMLQRFSDRTFVLITQIGKVGNLLSCSLETSDI-------DCSKTYHVSNLLGNREDSLLGVYARAILEKIVDLDKEQQRSSLTTTVPLLLGIALKKEGRGTEIFQSIIKQVISM 134
BLAST of mRNA_Ecto-sp13_S_contig14652.3562.1 vs. uniprot
Match: A0A7S3WF90_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3WF90_EMIHU) HSP 1 Score: 80.1 bits (196), Expect = 2.500e-16 Identity = 49/134 (36.57%), Postives = 79/134 (58.96%), Query Frame = 1
Query: 1 MELAAELSAARNAPGARQTAWMLNGIRTEVVVIPYADRTFVIVTQMKKLGNLLMATSDAAGGMMAGSGGRRYSVQVLLGRRDDPLLCLYARQMLEQMKSDKP--LLLAVCLKEEGRDTKTFQEVINQILSLGGW 396
+E+ A A + P ++ + G+ T ++ YA+R FV+V+Q + LG L+ AT ++A G+ +G G YS +VLLGRRDD L +YAR ++E + +P LLLA+ L + R TF EV+ + ++ W
Sbjct: 33 LEMIANGCAQQPGPLSKSAEVCIGGVSTRLIATAYANRIFVVVSQRENLGTLISATRESATGLASGPG--CYSTRVLLGRRDDEALEVYARTLVELINKSRPADLLLALNLLDSSR--ATFHEVMRALDAIKVW 162
BLAST of mRNA_Ecto-sp13_S_contig14652.3562.1 vs. uniprot
Match: A0A4D9CRY9_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CRY9_9STRA) HSP 1 Score: 79.0 bits (193), Expect = 2.860e-16 Identity = 41/109 (37.61%), Postives = 69/109 (63.30%), Query Frame = 1
Query: 67 LNGIRTEVVVIPYADRTFVIVTQMKKLGNLLMATSDAAGGMMAGSGGRRYSVQVLLGRRDDPLLCLYARQMLEQMK--SDKPLLLAVCLKEEGRDTKTFQEVINQILSL 387
+NG+ T+V + ++DR F++++Q + G ++ A +D + + + V VLLGRRDDPLL +YARQ++E + S +PLLL++ L+E RD TF++V + L
Sbjct: 20 INGVLTDVAIFNFSDRIFLVISQNARFGTVISAKADDS--VARPGAAPSFDVSVLLGRRDDPLLLIYARQLVETVSRSSSRPLLLSISLRE--RDPSTFEQVAAWVRPL 124 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14652.3562.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig14652.3562.1 >prot_Ecto-sp13_S_contig14652.3562.1 ID=prot_Ecto-sp13_S_contig14652.3562.1|Name=mRNA_Ecto-sp13_S_contig14652.3562.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=135bp MELAAELSAARNAPGARQTAWMLNGIRTEVVVIPYADRTFVIVTQMKKLGback to top mRNA from alignment at Ecto-sp13_S_contig14652:471..2544+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig14652.3562.1 ID=mRNA_Ecto-sp13_S_contig14652.3562.1|Name=mRNA_Ecto-sp13_S_contig14652.3562.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2074bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14652:471..2544+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig14652:471..2544+ >mRNA_Ecto-sp13_S_contig14652.3562.1 ID=mRNA_Ecto-sp13_S_contig14652.3562.1|Name=mRNA_Ecto-sp13_S_contig14652.3562.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=405bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14652:471..2544+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |