mRNA_Ecto-sp13_S_contig14650.3560.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig14650.3560.1 vs. uniprot
Match: D7FPC8_ECTSI (Hypothetical leucine rich repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPC8_ECTSI) HSP 1 Score: 190 bits (483), Expect = 4.610e-55 Identity = 101/110 (91.82%), Postives = 101/110 (91.82%), Query Frame = 1
Query: 16 KGSLLAFTFLHTLTLGNNRIGNLQASLGILRLMRHLRYLELSGNPLAEETGYRLLVIKNLPWLETLDMHKITEEERISARRARVPKSWEASARGAHSDSVRLTQDLAAEE 345
KGSLLAFTFLHTLTLG ASLGILRLMRHLRYLELSGNPLAEETGYRLLVIKNLPWLETLDMHKITEEER SARRARVPKSWEASARGAHSDSVRLTQDLAAEE
Sbjct: 43 KGSLLAFTFLHTLTLGXXXXXXXXASLGILRLMRHLRYLELSGNPLAEETGYRLLVIKNLPWLETLDMHKITEEERSSARRARVPKSWEASARGAHSDSVRLTQDLAAEE 152
BLAST of mRNA_Ecto-sp13_S_contig14650.3560.1 vs. uniprot
Match: F0YDM7_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YDM7_AURAN) HSP 1 Score: 72.8 bits (177), Expect = 5.290e-14 Identity = 39/82 (47.56%), Postives = 53/82 (64.63%), Query Frame = 1
Query: 13 EKGSLLAFTFLHTLTLGNNRIGNLQASLGILRLMRHLRYLELSGNPLAEETGYRLLVIKNLPWLETLDMHKITEEERISARR 258
E S+ + L L +NR+ +L+ + IL+ +R L+ L+L NPLAEET YRL VIK +PWLE LD KIT EER A++
Sbjct: 56 EGSSVGRLLHVEELILNDNRLEDLKTHVDILQRLRRLKRLDLYNNPLAEETSYRLHVIKAMPWLEVLDQMKITPEERAKAKK 137
BLAST of mRNA_Ecto-sp13_S_contig14650.3560.1 vs. uniprot
Match: A0A7S3QKS1_DUNTE (Hypothetical protein n=1 Tax=Dunaliella tertiolecta TaxID=3047 RepID=A0A7S3QKS1_DUNTE) HSP 1 Score: 73.2 bits (178), Expect = 8.690e-13 Identity = 37/80 (46.25%), Postives = 50/80 (62.50%), Query Frame = 1
Query: 16 KGSLLAFTFLHTLTLGNNRIGNLQASLGILRLMRHLRYLELSGNPLAEETGYRLLVIKNLPWLETLDMHKITEEERISAR 255
KG LL F FL L L NN + NL + L ++L+ L L+GNP EE YR++VI N+P L+ LD+H +T+ ER AR
Sbjct: 93 KGCLLTFKFLEVLDLSNNLLRNLDKIIATLSKFKYLKNLNLTGNPCIEEPDYRMIVIYNIPSLQILDLHMVTDTERQKAR 172
BLAST of mRNA_Ecto-sp13_S_contig14650.3560.1 vs. uniprot
Match: A0A1X0NZK7_9TRYP (Uncharacterized protein n=1 Tax=Trypanosoma theileri TaxID=67003 RepID=A0A1X0NZK7_9TRYP) HSP 1 Score: 64.3 bits (155), Expect = 1.310e-9 Identity = 38/84 (45.24%), Postives = 50/84 (59.52%), Query Frame = 1
Query: 43 LHTLTLGNNRIGNLQASLGILRLMRHLRYLELSGNPLAEETGYRLLVIKNLPWLETLDMHKITEEERISA------RRARVPKS 276
L LTL +NR+GNL+A L+ +R LR L+L GNPL +E GYRL +I P +E LD + EER +A R R P+S
Sbjct: 257 LEVLTLAHNRLGNLRAVSARLKPLRWLRELDLRGNPLCDEVGYRLFLIHEHPNIEILDRRAVRPEERKAAAEMYGSNRTRTPQS 340
BLAST of mRNA_Ecto-sp13_S_contig14650.3560.1 vs. uniprot
Match: A0A3R7LAG9_9TRYP (Putative leucine-rich repeat-containing protein 72-like n=1 Tax=Trypanosoma conorhini TaxID=83891 RepID=A0A3R7LAG9_9TRYP) HSP 1 Score: 62.0 bits (149), Expect = 8.400e-9 Identity = 34/70 (48.57%), Postives = 43/70 (61.43%), Query Frame = 1
Query: 43 LHTLTLGNNRIGNLQASLGILRLMRHLRYLELSGNPLAEETGYRLLVIKNLPWLETLDMHKITEEERISA 252
L L L +NR+ NL A L+L+R LR L+L GNPL +E GYRL +I P LE LD + +EER A
Sbjct: 211 LEVLFLAHNRLSNLSAVSAQLKLLRCLRELDLRGNPLCDEVGYRLFLIHEHPHLEVLDRRVVRDEERKEA 280
BLAST of mRNA_Ecto-sp13_S_contig14650.3560.1 vs. uniprot
Match: UPI0004F499B1 (putative leucine-rich repeat-containing protein 72-like n=1 Tax=Trypanosoma grayi TaxID=71804 RepID=UPI0004F499B1) HSP 1 Score: 60.8 bits (146), Expect = 2.110e-8 Identity = 34/70 (48.57%), Postives = 42/70 (60.00%), Query Frame = 1
Query: 43 LHTLTLGNNRIGNLQASLGILRLMRHLRYLELSGNPLAEETGYRLLVIKNLPWLETLDMHKITEEERISA 252
L L L NNR+ NL A L+ +R LR L+L GNPL +E GYRL +I LP LE LD + +ER A
Sbjct: 189 LEVLALANNRLSNLTAVSTQLKPLRCLRELDLRGNPLCDEVGYRLFLIYELPQLEVLDRRAVRYDERKEA 258
BLAST of mRNA_Ecto-sp13_S_contig14650.3560.1 vs. uniprot
Match: K2N8P0_TRYCR (Uncharacterized protein n=1 Tax=Trypanosoma cruzi marinkellei TaxID=85056 RepID=K2N8P0_TRYCR) HSP 1 Score: 58.9 bits (141), Expect = 1.010e-7 Identity = 33/70 (47.14%), Postives = 42/70 (60.00%), Query Frame = 1
Query: 43 LHTLTLGNNRIGNLQASLGILRLMRHLRYLELSGNPLAEETGYRLLVIKNLPWLETLDMHKITEEERISA 252
L L L +NR+ NL A LR ++ LR L+L GNPL +E GYRL +I P LE LD + +EER A
Sbjct: 199 LEVLFLAHNRLSNLNAVSAQLRPLKCLRELDLRGNPLCDEEGYRLFLIHEHPHLEVLDRRVVRDEERKEA 268
BLAST of mRNA_Ecto-sp13_S_contig14650.3560.1 vs. uniprot
Match: A0A3R7MEW6_TRYRA (Putative leucine-rich repeat-containing protein 72-like n=1 Tax=Trypanosoma rangeli TaxID=5698 RepID=A0A3R7MEW6_TRYRA) HSP 1 Score: 57.0 bits (136), Expect = 4.760e-7 Identity = 32/70 (45.71%), Postives = 42/70 (60.00%), Query Frame = 1
Query: 43 LHTLTLGNNRIGNLQASLGILRLMRHLRYLELSGNPLAEETGYRLLVIKNLPWLETLDMHKITEEERISA 252
L L L +NR+ +L A L+ +R LR L+L GNPL +E GYRL +I P LE LD + +EER A
Sbjct: 198 LEVLFLAHNRLSDLSAVSAQLKPLRCLRELDLRGNPLCDEVGYRLFLIYEHPHLEVLDRRVVRDEERKEA 267
BLAST of mRNA_Ecto-sp13_S_contig14650.3560.1 vs. uniprot
Match: A0A0N1IMK0_LEPSE (Uncharacterized protein n=1 Tax=Leptomonas seymouri TaxID=5684 RepID=A0A0N1IMK0_LEPSE) HSP 1 Score: 56.2 bits (134), Expect = 8.960e-7 Identity = 30/70 (42.86%), Postives = 43/70 (61.43%), Query Frame = 1
Query: 43 LHTLTLGNNRIGNLQASLGILRLMRHLRYLELSGNPLAEETGYRLLVIKNLPWLETLDMHKITEEERISA 252
L L+L +N + +L + LR +RHLRYL+L GNP+ +E YR I LP +E LD +T++ER A
Sbjct: 184 LEHLSLAHNELTDLDCIMQPLRRLRHLRYLDLRGNPIVDEPSYRQRCIVALPQVEVLDGLTVTQDERRDA 253
BLAST of mRNA_Ecto-sp13_S_contig14650.3560.1 vs. uniprot
Match: H2YA28_CIOSA (Uncharacterized protein n=1 Tax=Ciona savignyi TaxID=51511 RepID=H2YA28_CIOSA) HSP 1 Score: 55.1 bits (131), Expect = 1.460e-6 Identity = 33/85 (38.82%), Postives = 46/85 (54.12%), Query Frame = 1
Query: 19 GSLLAFTFLHTLTLGNNRIGNLQASLGILRLMRHLRYLELSGNPLAEETGYRLLVIKNLPWLETLDMHKITEEERISARRARVPK 273
G L +L L L N++ NL A L + + LR L L NP+A E+GYRLLVI +LP + LD +T ER ++ P+
Sbjct: 88 GCLSHLRYLQVLMLQKNQLVNLNAVLHEISPLHALRVLNLFDNPVAHESGYRLLVIHSLPSVALLDREAVTSNERKRSKAIHEPE 172 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14650.3560.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig14650.3560.1 >prot_Ecto-sp13_S_contig14650.3560.1 ID=prot_Ecto-sp13_S_contig14650.3560.1|Name=mRNA_Ecto-sp13_S_contig14650.3560.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=116bp MVRYEKGSLLAFTFLHTLTLGNNRIGNLQASLGILRLMRHLRYLELSGNPback to top mRNA from alignment at Ecto-sp13_S_contig14650:1737..2756+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig14650.3560.1 ID=mRNA_Ecto-sp13_S_contig14650.3560.1|Name=mRNA_Ecto-sp13_S_contig14650.3560.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1020bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14650:1737..2756+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig14650:1737..2756+ >mRNA_Ecto-sp13_S_contig14650.3560.1 ID=mRNA_Ecto-sp13_S_contig14650.3560.1|Name=mRNA_Ecto-sp13_S_contig14650.3560.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=348bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14650:1737..2756+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |