mRNA_Ecto-sp13_S_contig1464.3558.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig1464.3558.1
Unique NamemRNA_Ecto-sp13_S_contig1464.3558.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig1464.3558.1 vs. uniprot
Match: D8LGK6_ECTSI (BTB domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGK6_ECTSI)

HSP 1 Score: 861 bits (2224), Expect = 2.540e-308
Identity = 440/501 (87.82%), Postives = 445/501 (88.82%), Query Frame = 1
Query:    1 LFSEDGAVYTWGRGDDGRLGHGDNGWKYVPRIVEALEGQRIVQATCGSYHTAAVTDKGELYTWGGGMYGKLGHGNESGHPTPCMVKHLRDEGARVTQIACGSRHTVVLTDLGKVYTWGDKENGVVGHTNADGHQYLPRMLESLQAKTVTQVAACGFHTAALTDAGEIFTWGEGKFGRLGHGMERNQMVPRMVEALMGKRVGHVACGGFHSAAILESGELYTWGGGEHGQLGHGDKVNKTSPTLVEGLVSHPLVQITCGWSHTVGLTATGKVYTFGNGDHGKLGHGDVRKVSVPTLVAGLVKMHVVKVASYNEHTAALAGASSSTPALSSMSSSFMADIRSLLDDQDLSDVTFIVEGSPVYAHKALLAARCQHFRAMFTSGMRESHEQEVVIPHVRLPIFKVLLEYIYADSVDVSLEDAVELFIAADQYTLDRLKGLCELSVQKGITADNSASLLHTSDDLRATRLREICMRFVVRHFDTVSKSEGFKVLSRELIFDVLSSR 1503
            + SEDGAVYTWGRGDDGRLGHGDNGWKYVPRIVEALEGQRIVQATCGSYHTAAVTDKGELYTWGGGMYGKLGHGNESGHPTPCMVKHLRDEGARVTQIACGSRHTVVLTDLGKVYTWGDKENGVVGHTNADGHQYLPRMLESLQAKTVTQVAACGFHTAALT AGEIFTWGEGKFGRLGHGMERNQMVPRMVEALMGKRVGHVACGGFHSAAIL+SGELYTWGGGEH                                                     KLGHGDVRKVSVPTLVAGLVKMHVVKVASYNEHTAALAGASSSTPALSSMSSSFM DIRSLLD+QDLSDVTF+VEGSPVYAHKALLAARCQHFRAMFTSGMRESHEQEVVIPHVRLPIFKVLLEYIYADSVDVSLEDAVELFIAADQYTLDRLKGLCEL+VQKGITADNSASLLHTSDDLRATRLREICMRFVVRHFDTVSKSEGFKVLSRELIFDVLSSR
Sbjct:   54 VLSEDGAVYTWGRGDDGRLGHGDNGWKYVPRIVEALEGQRIVQATCGSYHTAAVTDKGELYTWGGGMYGKLGHGNESGHPTPCMVKHLRDEGARVTQIACGSRHTVVLTDLGKVYTWGDKENGVVGHTNADGHQYLPRMLESLQAKTVTQVAACGFHTAALTAAGEIFTWGEGKFGRLGHGMERNQMVPRMVEALMGKRVGHVACGGFHSAAILDSGELYTWGGGEHXXXXXXXXXXXX-----------------------------------------KLGHGDVRKVSVPTLVAGLVKMHVVKVASYNEHTAALAGASSSTPALSSMSSSFMTDIRSLLDNQDLSDVTFVVEGSPVYAHKALLAARCQHFRAMFTSGMRESHEQEVVIPHVRLPIFKVLLEYIYADSVDVSLEDAVELFIAADQYTLDRLKGLCELAVQKGITADNSASLLHTSDDLRATRLREICMRFVVRHFDTVSKSEGFKVLSRELIFDVLSSR 513          
BLAST of mRNA_Ecto-sp13_S_contig1464.3558.1 vs. uniprot
Match: A0A2D4CB68_PYTIN (BTB domain-containing protein (Fragment) n=2 Tax=Pythium TaxID=4797 RepID=A0A2D4CB68_PYTIN)

HSP 1 Score: 686 bits (1770), Expect = 5.530e-239
Identity = 329/501 (65.67%), Postives = 402/501 (80.24%), Query Frame = 1
Query:    1 LFSEDGAVYTWGRGDDGRLGHGDNGWKYVPRIVEALEGQRIVQATCGSYHTAAVTDKGELYTWGGGMYGKLGHGNESGHPTPCMVKHLRDEGARVTQIACGSRHTVVLTDLGKVYTWGDKENGVVGHTNADGHQYLPRMLESLQAKTVTQVAACGFHTAALTDAGEIFTWGEGKFGRLGHGMERNQMVPRMVEALMGKRVGHVACGGFHSAAILESGELYTWGGGEHGQLGHGDKVNKTSPTLVEGLVSHPLVQITCGWSHTVGLTATGKVYTFGNGDHGKLGHGDVRKVSVPTLVAGLVKMHVVKVASYNEHTAALAGASSSTPALSSMSSSFMADIRSLLDDQDLSDVTFIVEGSPVYAHKALLAARCQHFRAMFTSGMRESHEQEVVIPHVRLPIFKVLLEYIYADSVDVSLEDAVELFIAADQYTLDRLKGLCELSVQKGITADNSASLLHTSDDLRATRLREICMRFVVRHFDTVSKSEGFKVLSRELIFDVLSSR 1503
            + ++DG VYTWGRGDDGRLGHGDNGWK+VPR+VE L G++I Q TCGSYHTAAVT  GEL+TWGGGMYGKLGHGNE+GH TPC+V+ L+ +  R  Q+ACGSRHTVVL +   VYTWGDKE GV GH + DGHQYLPR++E L+ + V Q++ACGFHTAALT++GE+FT+GEGKFGRLGH  ERNQ+V R VE L+GKRV  +ACGGFH+AA+ E+GE+ TWGGGEHGQLGHGDKVN+T PTLVE L+   +VQITCGWSHTVGLT TG VYT+GNGDHGKLGH D  KV++P  V  L    V+ VASYNEHT AL    + T   S ++SS+M D+R L+D+ + +DV FIVEG   + H+A+LAAR  HFRAMF+SGMRES E E+ + H+R+P+F  L+EYIY DSVDV  E A+ELF AAD YTLDRLKGLCE+ VQK IT DN+A+L  T+DDL+ATRLREIC+ ++VRHFD V+K++GF  LSR+LI +VL SR
Sbjct:   45 VLTDDGEVYTWGRGDDGRLGHGDNGWKFVPRLVEELRGKKIRQVTCGSYHTAAVTVSGELFTWGGGMYGKLGHGNETGHSTPCLVEALKAQPVR--QVACGSRHTVVLLENKDVYTWGDKEKGVSGHGDTDGHQYLPRVVEELRGQHVKQISACGFHTAALTESGEVFTFGEGKFGRLGHNSERNQLVARKVETLVGKRVKQIACGGFHTAAVTETGEVXTWGGGEHGQLGHGDKVNRTVPTLVEALMDKIVVQITCGWSHTVGLTDTGDVYTWGNGDHGKLGHNDTNKVTLPKAVEVLQSKRVIAVASYNEHTVALVDPIA-TVRTSLLTSSYMCDMRQLIDNPEFADVKFIVEGRAXHCHRAILAARSDHFRAMFSSGMRESRESEIPLTHMRIPVFLALMEYIYVDSVDVGAEMALELFAAADLYTLDRLKGLCEIIVQKNITVDNAATLFQTADDLQATRLREICLSYLVRHFDAVTKTDGFAHLSRDLIIEVLQSR 542          
BLAST of mRNA_Ecto-sp13_S_contig1464.3558.1 vs. uniprot
Match: H3H2V0_PHYRM (BTB domain-containing protein n=26 Tax=Peronosporaceae TaxID=4777 RepID=H3H2V0_PHYRM)

HSP 1 Score: 670 bits (1729), Expect = 9.910e-233
Identity = 323/501 (64.47%), Postives = 400/501 (79.84%), Query Frame = 1
Query:    1 LFSEDGAVYTWGRGDDGRLGHGDNGWKYVPRIVEALEGQRIVQATCGSYHTAAVTDKGELYTWGGGMYGKLGHGNESGHPTPCMVKHLRDEGARVTQIACGSRHTVVLTDLGKVYTWGDKENGVVGHTNADGHQYLPRMLESLQAKTVTQVAACGFHTAALTDAGEIFTWGEGKFGRLGHGMERNQMVPRMVEALMGKRVGHVACGGFHSAAILESGELYTWGGGEHGQLGHGDKVNKTSPTLVEGLVSHPLVQITCGWSHTVGLTATGKVYTFGNGDHGKLGHGDVRKVSVPTLVAGLVKMHVVKVASYNEHTAALAGASSSTPALSSMSSSFMADIRSLLDDQDLSDVTFIVEGSPVYAHKALLAARCQHFRAMFTSGMRESHEQEVVIPHVRLPIFKVLLEYIYADSVDVSLEDAVELFIAADQYTLDRLKGLCELSVQKGITADNSASLLHTSDDLRATRLREICMRFVVRHFDTVSKSEGFKVLSRELIFDVLSSR 1503
            + +++G VYTWGRGDDGRLGHGDNGWK+VPR+VE L G+ I Q TCGSYHTAAVT  G+LYTWGGGMYGKLGHGNE+GH TP +V+ L+  G +V Q+ACGSRHTVVL +   VYTWGDKENGV GH + +GHQYLP  +E L+ K++ Q++ACGFHTAAL++ GE+FT+GEGKFGRLGH  ERNQ V R+VEAL GKRV  VACGGFH+AA+ E+GE+YTWGGGEHGQLGHGDKVNKT PT VE LV   +VQITCGWSHTV LT TG+VYT+GNGDHGKLGH D  KV++P LV  L    V+ VASYNEHT AL    +   A S ++SS++ D+R L+D  + SDVTF++EG  V++H+A+LAAR  HFRAMF+SGMRESHEQE+ + H R+P+F  LLEYIY DS++V  E A+EL+ AAD YTLDRLKGLCE+ VQK I  +N+A+L  ++DDL + RLREIC+ ++V +FD V+KS+GF  LSR+LI +VL +R
Sbjct:   48 VLTDEGEVYTWGRGDDGRLGHGDNGWKFVPRLVEELRGKNIRQVTCGSYHTAAVTVSGDLYTWGGGMYGKLGHGNETGHSTPFLVETLK--GMQVRQVACGSRHTVVLLENKDVYTWGDKENGVSGHGDTEGHQYLPCPVEELRGKSIVQISACGFHTAALSEFGEVFTFGEGKFGRLGHNSERNQPVARLVEALAGKRVKQVACGGFHTAAVTETGEVYTWGGGEHGQLGHGDKVNKTVPTRVENLVDKLVVQITCGWSHTVALTDTGEVYTWGNGDHGKLGHNDTTKVTLPKLVDVLEGKRVISVASYNEHTVALVDPVAMLRA-SMLTSSYVGDMRQLIDSAEFSDVTFLIEGRAVHSHRAILAARSDHFRAMFSSGMRESHEQEIPLMHTRVPVFLALLEYIYVDSINVGAEMALELYAAADLYTLDRLKGLCEIIVQKNINVENAAALFQSADDLHSYRLREICLSYMVLNFDMVTKSDGFAGLSRDLILEVLQNR 545          
BLAST of mRNA_Ecto-sp13_S_contig1464.3558.1 vs. uniprot
Match: A0A5D6YMT2_9STRA (BTB domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YMT2_9STRA)

HSP 1 Score: 664 bits (1712), Expect = 7.290e-230
Identity = 321/501 (64.07%), Postives = 393/501 (78.44%), Query Frame = 1
Query:    1 LFSEDGAVYTWGRGDDGRLGHGDNGWKYVPRIVEALEGQRIVQATCGSYHTAAVTDKGELYTWGGGMYGKLGHGNESGHPTPCMVKHLRDEGARVTQIACGSRHTVVLTDLGKVYTWGDKENGVVGHTNADGHQYLPRMLESLQAKTVTQVAACGFHTAALTDAGEIFTWGEGKFGRLGHGMERNQMVPRMVEALMGKRVGHVACGGFHSAAILESGELYTWGGGEHGQLGHGDKVNKTSPTLVEGLVSHPLVQITCGWSHTVGLTATGKVYTFGNGDHGKLGHGDVRKVSVPTLVAGLVKMHVVKVASYNEHTAALAGASSSTPALSSMSSSFMADIRSLLDDQDLSDVTFIVEGSPVYAHKALLAARCQHFRAMFTSGMRESHEQEVVIPHVRLPIFKVLLEYIYADSVDVSLEDAVELFIAADQYTLDRLKGLCELSVQKGITADNSASLLHTSDDLRATRLREICMRFVVRHFDTVSKSEGFKVLSRELIFDVLSSR 1503
            + +E+G V+TWGRGDDGRLGHGDNGWK+VPR+VE L G+ I Q TCGSYHTAAVT  G+LYTWGGGMYGKLGHGNE+GH TP +V+ L+  G +V Q+ACGSRHTVVL +   VYTWGDKENGV GH   +G QYLP  LE L+ K+V Q++ACGFHTAALTDAGE++T+G+GKFGRLGH  ERNQ V R V+ L  KRV  VACGGFH+AA+ E+GE+YTWGGGEHGQLGHGDKVN+T+PTLV  L    +VQITCGWSHTV LT  G+V+T+GNGDHGKLGH D  KV+VP  V  L    VV VASYNEHT AL    ++  A S + SS++ D+R L+D  + +DVTFIVEG  V+AH+A+LAAR  HFRAMF+SGMRES E EV + H R+P+F  LLEYIY D+VDV  E A+ELF AAD YTL+RL+GLCE+ VQK +  +N+A+L  ++D+L + RLRE+C+ F+VRHFD V+K+EGF  LSR+LI DVL +R
Sbjct:   67 VLTEEGEVFTWGRGDDGRLGHGDNGWKFVPRLVEELRGRNIRQVTCGSYHTAAVTVAGDLYTWGGGMYGKLGHGNETGHSTPFLVESLK--GLQVRQVACGSRHTVVLLENRDVYTWGDKENGVSGHGETEGQQYLPSSLEELRGKSVKQISACGFHTAALTDAGEVYTFGDGKFGRLGHNSERNQAVARFVDGLADKRVRQVACGGFHTAAVTETGEVYTWGGGEHGQLGHGDKVNRTAPTLVRALADKLVVQITCGWSHTVALTDAGEVFTWGNGDHGKLGHSDTTKVTVPKPVDALAAKRVVAVASYNEHTVALVDPVATVRA-SQLVSSYLGDMRRLIDAPEFADVTFIVEGRAVHAHRAVLAARSDHFRAMFSSGMRESREHEVPLRHTRVPVFLALLEYIYVDTVDVGAEMALELFAAADLYTLERLQGLCEIIVQKSVAVENAAALFQSADELHSHRLREVCLAFIVRHFDQVTKTEGFANLSRDLILDVLQNR 564          
BLAST of mRNA_Ecto-sp13_S_contig1464.3558.1 vs. uniprot
Match: K3WAD0_GLOUD (BTB domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WAD0_GLOUD)

HSP 1 Score: 657 bits (1694), Expect = 2.100e-227
Identity = 317/503 (63.02%), Postives = 396/503 (78.73%), Query Frame = 1
Query:    1 LFSEDGAVYTWGRGDDGRLGHGDNGWKYVPRIVEALEGQRIVQATCGSYHTAAVTDKGELYTWGGGMYGKLGHGNESGHPTPCMVKHLRDEGARVTQIACGSRHTVVLTDLGKVYTWGDKENGVVGHTNADGHQYLPRMLESLQAKTVTQVAACGFHTAALTDAGEIFTWGEGKFGRLGHGMERNQMVPRMVEALMGKRVGHVACGGFHSAAILESGELYTWGGGEHGQLGHGDKVNKTSPTLVEGLV--SHPLVQITCGWSHTVGLTATGKVYTFGNGDHGKLGHGDVRKVSVPTLVAGLVKMHVVKVASYNEHTAALAGASSSTPALSSMSSSFMADIRSLLDDQDLSDVTFIVEGSPVYAHKALLAARCQHFRAMFTSGMRESHEQEVVIPHVRLPIFKVLLEYIYADSVDVSLEDAVELFIAADQYTLDRLKGLCELSVQKGITADNSASLLHTSDDLRATRLREICMRFVVRHFDTVSKSEGFKVLSRELIFDVLSSR 1503
            + +E+G VYTWGRGDDGRLGHGDNGWK+VPR+VE L G+ I Q TCGSYHTAAVT  GELYTWGGGMYGKLGHGNE+GH TP +V+ L+  G  V Q+ACGSRHTVVL +   VYTWGDKENGV GH + +G QYLP  +E L+ K++ Q++ACGFHTAAL+++G+++T+GEGKFGRLGH  ERNQ V R V+ L GKRV  +ACGGFH+AA+ E+G++YTWGGGEHGQLGHGDK+NK +PTLV  LV  +H +VQITCGWSHTV LT TG V T+GNGDHGKLGH D  KV+VP LV  L    VV VASYNEHT AL    +   + S ++SS++ D+R L++D + SDVTF++EG  VYAH+A+LA R  HFRAMFTSGMRES E E+ + H+R+P+F  LLEY+Y D+V V  E A+ELF AAD YTL+RLKGLCEL VQK +  +N+A+L  ++D+L A+RLREIC+ ++VRHFD V+K++ F  LSR+LI +VL SR
Sbjct:   48 VLTEEGEVYTWGRGDDGRLGHGDNGWKFVPRLVEELRGRAIRQVTCGSYHTAAVTVSGELYTWGGGMYGKLGHGNETGHSTPYLVESLK--GLPVRQVACGSRHTVVLLENKDVYTWGDKENGVSGHGDTEGQQYLPCNVEELRGKSIKQISACGFHTAALSESGDVYTFGEGKFGRLGHNSERNQSVARFVDGLAGKRVKQIACGGFHTAAVTETGQVYTWGGGEHGQLGHGDKINKPAPTLVRSLVENNHVVVQITCGWSHTVALTDTGHVLTWGNGDHGKLGHNDTNKVTVPKLVDVLDSKRVVSVASYNEHTVALVDPIAPLRS-SQLTSSYLGDMRHLINDAEFSDVTFLIEGRAVYAHRAILATRSDHFRAMFTSGMRESREHEITLQHLRVPVFLALLEYLYVDAVTVGPEMALELFAAADLYTLERLKGLCELLVQKHMAIENAAALFQSADELHASRLREICLAYMVRHFDQVTKTDAFANLSRDLILEVLQSR 547          
BLAST of mRNA_Ecto-sp13_S_contig1464.3558.1 vs. uniprot
Match: T0QPW3_SAPDV (BTB domain-containing protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=T0QPW3_SAPDV)

HSP 1 Score: 653 bits (1685), Expect = 5.780e-226
Identity = 317/503 (63.02%), Postives = 398/503 (79.13%), Query Frame = 1
Query:    1 LFSEDGAVYTWGRGDDGRLGHGDNGWKYVPRIVEALEGQRIVQATCGSYHTAAVTDKGELYTWGGGMYGKLGHGNESGHPTPCMVKHLRDEGARVTQIACGSRHTVVLTDLGKVYTWGDKENGVVGHTNADGHQYLPRMLESLQAKTVTQVAACGFHTAALTDAGEIFTWGEGKFGRLGHGMERNQMVPRMVEALMGKRVGHVACGGFHSAAILESGELYTWGGGEHGQLGHGDKVNKTSPTLVEGLVSHPLVQITCGWSHTVGLTATGKVYTFGNGDHGKLGHGDVRKVSVPTLVAGLVKMHVVKVASYNEHTAALAG-ASSSTPALSSMSSSFMADIRSLLDDQDLSDVTFIVEGSPVYAHKALLAARCQHFRAMFTSGMRESHEQEVVIPHVRLPIFKVLLEYIYADSVDVSLED-AVELFIAADQYTLDRLKGLCELSVQKGITADNSASLLHTSDDLRATRLREICMRFVVRHFDTVSKSEGFKVLSRELIFDVLSSR 1503
            +  E+G VYTWGRGDDGRLGHGDNGWK+VPR+VEAL G+RI Q TCGSYHTAAVT  GELYTWGGGMYGKLGHGNESGH  P +V  L +   +V Q+ACGSRHTVVL +   VYTWGDKENGV GH + DGHQYLP  ++ L+ K++ Q+AACGFHTAAL++ GE++T+GEGKFGRLGH  ERNQ+V R+VE L GKR+  VACGGFH+AA+ ++GE++TWGGGEHGQLGHGDKVNKT P+LV+ L    +VQITCGWSHTV LT  G+VYT+GNGDHGKLGH D  KV++P LV  L    VV +ASYNEHT AL    +   P+L  ++S++ A++RSL+D  + +DV F+V+G  V+AH+A+LAAR  HF+AMF+SGMRE+ E EV +  +R  +F +LLEY+Y D+VDV   + A+EL+ AAD YTLDRLKGLCEL VQKG+T +N+  LL  +D+L A RLR++CM F+VRHFDTV+K+EGF++LSRELI + L +R
Sbjct:   54 VLDENGDVYTWGRGDDGRLGHGDNGWKFVPRLVEALHGKRIKQVTCGSYHTAAVTVTGELYTWGGGMYGKLGHGNESGHSVPYLVDTLSNH--KVDQVACGSRHTVVLLENRDVYTWGDKENGVSGHGDTDGHQYLPCAVDELKDKSIMQIAACGFHTAALSEEGELYTFGEGKFGRLGHNSERNQLVARVVETLHGKRIKQVACGGFHTAAVTDTGEIFTWGGGEHGQLGHGDKVNKTIPSLVKHLADKVVVQITCGWSHTVALTENGEVYTWGNGDHGKLGHNDQVKVTLPKLVETLQSKRVVSIASYNEHTVALVDPVAMLRPSL--LTSTYAANMRSLIDQPEFADVVFLVDGRRVHAHRAILAARSDHFKAMFSSGMREARELEVHVETIRAAVFLLLLEYMYNDTVDVPTPELAIELYAAADMYTLDRLKGLCELVVQKGLTVENAGVLLSAADELHAGRLRDLCMHFIVRHFDTVTKTEGFQLLSRELILETLQNR 552          
BLAST of mRNA_Ecto-sp13_S_contig1464.3558.1 vs. uniprot
Match: A0A1V9ZGJ4_9STRA (Regulator of chromosome condensation (RCC1) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZGJ4_9STRA)

HSP 1 Score: 658 bits (1697), Expect = 4.430e-224
Identity = 321/517 (62.09%), Postives = 403/517 (77.95%), Query Frame = 1
Query:    1 LFSEDGAVYTWGRGDDGRLGHGDNGWKYVPRIVEALEGQRIVQATCGSYHTAAVTDKGELYTWGGGMYGKLGHGNESGHPTPCMVKHLRDEGARVTQIACGSRHTVVLTDLGKVYTWGDKENGVVGHTNADGHQYLPRMLESLQAKTVTQVAACGFHTAALTDAGEIFTWGEGKFGRLGHGMERNQMVPRMVEALMGKRVGHVACGGFHSAAILESGELYTWGGGEHGQLGHGDKVNKTSPTLVEGLVSHPLVQITCGWSHTVGLTATGKVYTFGNGDHGKLG--------------HGDVRKVSVPTLVAGLVKMHVVKVASYNEHTAALAG-ASSSTPALSSMSSSFMADIRSLLDDQDLSDVTFIVEGSPVYAHKALLAARCQHFRAMFTSGMRESHEQEVVIPHVRLPIFKVLLEYIYADSVDV-SLEDAVELFIAADQYTLDRLKGLCELSVQKGITADNSASLLHTSDDLRATRLREICMRFVVRHFDTVSKSEGFKVLSRELIFDVLSSR 1503
            +  EDG VYTWGRGDDGRLGHGDNGWK+VPR+VE+L G+RI Q TCGSYHTAAVT  GELYTWGGGMYGKLGHGNESGH  P +V  L +   +V Q+ACGSRHTVVL +   VYTWGDKENGV GH + DGHQYLP  ++ L+ K++ Q+AACGFHTAAL+D GE++T+GEGKFGRLGH  ERNQ+V RMVE L G+R+  VACGGFH+AA+ ++GE++TWGGGEHGQLGHGDKVNKT P+LV+ L    +VQITCGWSHTV LT  G+VYT+GNGDHGKLG              H D  KV++P LV  L    VV +ASYNEHT AL    +   P++  ++S++ A++RS++D ++ SDV FIVEG  +++H+A+LAAR  HF+AMF+SGMRES E EV +P +R+P+F  LLEYIY D+V V S E A+EL+ AAD YTLDRLKGLCE+ VQKG++ +N+  LL  +DDL+A+RLR++CM F+VRHFDTV+K+EGF++LSRELI + L +R
Sbjct:  289 VLDEDGNVYTWGRGDDGRLGHGDNGWKFVPRLVESLHGKRIKQVTCGSYHTAAVTSTGELYTWGGGMYGKLGHGNESGHSVPYLVSTLSNH--KVDQVACGSRHTVVLLENRDVYTWGDKENGVSGHGDTDGHQYLPCAVDELKDKSIMQIAACGFHTAALSDKGELYTFGEGKFGRLGHNSERNQLVARMVETLSGRRIKQVACGGFHTAAVTDTGEVFTWGGGEHGQLGHGDKVNKTVPSLVKHLADKVVVQITCGWSHTVALTENGEVYTWGNGDHGKLGTSKVSRSFADKTLGHNDQVKVTLPKLVDTLQSKRVVSIASYNEHTVALVDPVAMLRPSV--LTSTYAANMRSIIDQEEFSDVVFIVEGRRIFSHRAILAARSDHFKAMFSSGMRESRELEVHVPLIRIPVFLALLEYIYNDTVSVESPEMAIELYAAADMYTLDRLKGLCEIVVQKGLSVENAGMLLSAADDLQASRLRDLCMHFIVRHFDTVTKTEGFQLLSRELILETLQNR 801          
BLAST of mRNA_Ecto-sp13_S_contig1464.3558.1 vs. uniprot
Match: A0A024URS6_9STRA (BTB domain-containing protein n=3 Tax=Aphanomyces TaxID=100860 RepID=A0A024URS6_9STRA)

HSP 1 Score: 642 bits (1657), Expect = 8.310e-222
Identity = 313/504 (62.10%), Postives = 388/504 (76.98%), Query Frame = 1
Query:    1 LFSEDGAVYTWGRGDDGRLGHGDNGWKYVPRIVEALEGQRIVQATCGSYHTAAVTDKGELYTWGGGMYGKLGHGNESGHPTPCMVKHLRDEGARVTQIACGSRHTVVLTDLGKVYTWGDKENGVVGHTNADGHQYLPRMLESLQAKTVTQVAACGFHTAALTDAGEIFTWGEGKFGRLGHGMERNQMVPRMVEALMGKRVGHVACGGFHSAAILESGELYTWGGGEHGQLGHGDKVNKTSPTLVEGLVSHPLVQITCGWSHTVGLTATGKVYTFGNGDHGKLGHGDVRKVSVPTLVAGLVKMHVVKVASYNEHTAALAG-ASSSTPALSSMSSSFMADIRSLLDDQDLSDVTFIVEGSPVYAHKALLAARCQHFRAMFTSGMRESHEQEVVIPHVRLPIFKVLLEYIYADSV--DVSLEDAVELFIAADQYTLDRLKGLCELSVQKGITADNSASLLHTSDDLRATRLREICMRFVVRHFDTVSKSEGFKVLSRELIFDVLSSR 1503
            +  + G VYTWGRGDDGRLGHGDNGWK+VPR+VE+L+ ++I Q TCGSYHTAAVT  GELYTWGGGMYGKLGHGNE GH  P +V+ L +   +V Q+ACGSRHTVVL     VYTWGDKENGV G  + DGHQYLP  +E L+ K + Q+AACGFHTAAL+D GE++T+GEGKFGRLGH  ERNQ+V ++VE L+   +  VACGGFH+AA+ E GE+YTWGGGEHGQLGHGDKVNKT P+LVE L    +V+ITCGWSHTV LT TG V+T+GNGDHGKLGH D  KV++P LV GL    VV VASYNEHT AL     +  P L  ++S++  ++++L+D  D +DV F+VE   +Y H+A+LAARC HFRAMF+SGMRES E EV +P +R+P+F  LLEYIY D+V  D+  E A+EL+  AD Y LDRLKGLCE  VQKG+  DN++ LL  +D+L+A+RLREICM F+VRHFD V+K+EGF +LSR+LI + L +R
Sbjct:   48 VLDDKGDVYTWGRGDDGRLGHGDNGWKFVPRLVESLQNKQIKQVTCGSYHTAAVTVSGELYTWGGGMYGKLGHGNEIGHSVPYLVETLSN--LKVDQVACGSRHTVVLLKNSDVYTWGDKENGVSGQGDTDGHQYLPSAVEELKNKGIKQIAACGFHTAALSDKGELYTFGEGKFGRLGHNSERNQIVAKVVETLLSSPIRQVACGGFHTAAVTECGEVYTWGGGEHGQLGHGDKVNKTIPSLVEKLKDRVVVEITCGWSHTVALTNTGDVFTWGNGDHGKLGHNDQVKVTLPRLVDGLHGKRVVSVASYNEHTVALVDPVQAFRPLL--LNSTYSDEMQTLVDQPDFADVVFVVESRRIYGHRAILAARCPHFRAMFSSGMRESREMEVPVPLIRVPVFLALLEYIYNDTVSPDMKAEMAIELYACADMYGLDRLKGLCEAMVQKGLVVDNASVLLQAADELQASRLREICMHFIVRHFDYVTKTEGFHMLSRDLILETLQNR 547          
BLAST of mRNA_Ecto-sp13_S_contig1464.3558.1 vs. uniprot
Match: W4HDM6_9STRA (BTB domain-containing protein n=7 Tax=Aphanomyces astaci TaxID=112090 RepID=W4HDM6_9STRA)

HSP 1 Score: 640 bits (1650), Expect = 9.500e-221
Identity = 311/504 (61.71%), Postives = 390/504 (77.38%), Query Frame = 1
Query:    1 LFSEDGAVYTWGRGDDGRLGHGDNGWKYVPRIVEALEGQRIVQATCGSYHTAAVTDKGELYTWGGGMYGKLGHGNESGHPTPCMVKHLRDEGARVTQIACGSRHTVVLTDLGKVYTWGDKENGVVGHTNADGHQYLPRMLESLQAKTVTQVAACGFHTAALTDAGEIFTWGEGKFGRLGHGMERNQMVPRMVEALMGKRVGHVACGGFHSAAILESGELYTWGGGEHGQLGHGDKVNKTSPTLVEGLVSHPLVQITCGWSHTVGLTATGKVYTFGNGDHGKLGHGDVRKVSVPTLVAGLVKMHVVKVASYNEHTAALAG-ASSSTPALSSMSSSFMADIRSLLDDQDLSDVTFIVEGSPVYAHKALLAARCQHFRAMFTSGMRESHEQEVVIPHVRLPIFKVLLEYIYADSV--DVSLEDAVELFIAADQYTLDRLKGLCELSVQKGITADNSASLLHTSDDLRATRLREICMRFVVRHFDTVSKSEGFKVLSRELIFDVLSSR 1503
            +  + G VYTWGRGDDGRLGHGDNGWK+VPR+VE+L+ ++I Q TCGSYHTAAVT  GELYTWGGGMYGKLGHGNE GH  P +V+ L +   +V Q+ACGSRHTVVL     VYTWGDKENGV G  + DGHQYLP  +E L+ K + Q+AACGFHTAAL+D GE++T+GEGKFGRLGH  ERNQ+V ++V+ L+   +  VACGGFH+AA+ ESGE+YTWGGGEHGQLGHGDKVNKT P+LVE L    +VQITCGWSHTV LT TG+V+T+GNGDHGKLGH D  KV++P  V GL    VV VASYNEHT AL     +  P L  +SS++ +D+++L+D+ D +DV F+VE   ++ H+A+LAARC HF+AMF+SGMRES E EV +P +R+P+F  LLEY+Y D V  D++ E A+EL+  AD Y LDRLKGLCE+ VQKG+  DN+  LL  +D+L A+RLREICM F++RHFD V+K+EGF +LSR+LI + L +R
Sbjct:   48 VLDDKGDVYTWGRGDDGRLGHGDNGWKFVPRLVESLQTKQIKQVTCGSYHTAAVTVSGELYTWGGGMYGKLGHGNEVGHSVPYLVETLSN--LKVDQVACGSRHTVVLLQNSDVYTWGDKENGVSGQGDTDGHQYLPCAVEELKNKGIKQIAACGFHTAALSDKGELYTFGEGKFGRLGHNNERNQIVAKVVDTLVSSPIRQVACGGFHTAAVSESGEVYTWGGGEHGQLGHGDKVNKTIPSLVEKLNDRVVVQITCGWSHTVALTNTGEVFTWGNGDHGKLGHNDQVKVTLPRAVDGLHGKRVVSVASYNEHTVALVDPVLAFRPLL--LSSTYASDMQTLVDEPDFADVVFLVESRRIFGHRAILAARCPHFKAMFSSGMRESRELEVPVPSIRIPVFLALLEYVYNDVVAADMTAEMAIELYACADMYGLDRLKGLCEVLVQKGLVVDNAGVLLQAADELHASRLREICMHFIIRHFDYVTKTEGFHMLSRDLILETLQNR 547          
BLAST of mRNA_Ecto-sp13_S_contig1464.3558.1 vs. uniprot
Match: F0W8U3_9STRA (Regulator of chromosome condensation (RCC1)like protein putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W8U3_9STRA)

HSP 1 Score: 632 bits (1629), Expect = 1.320e-217
Identity = 295/501 (58.88%), Postives = 384/501 (76.65%), Query Frame = 1
Query:    1 LFSEDGAVYTWGRGDDGRLGHGDNGWKYVPRIVEALEGQRIVQATCGSYHTAAVTDKGELYTWGGGMYGKLGHGNESGHPTPCMVKHLRDEGARVTQIACGSRHTVVLTDLGKVYTWGDKENGVVGHTNADGHQYLPRMLESLQAKTVTQVAACGFHTAALTDAGEIFTWGEGKFGRLGHGMERNQMVPRMVEALMGKRVGHVACGGFHSAAILESGELYTWGGGEHGQLGHGDKVNKTSPTLVEGLVSHPLVQITCGWSHTVGLTATGKVYTFGNGDHGKLGHGDVRKVSVPTLVAGLVKMHVVKVASYNEHTAALAGASSSTPALSSMSSSFMADIRSLLDDQDLSDVTFIVEGSPVYAHKALLAARCQHFRAMFTSGMRESHEQEVVIPHVRLPIFKVLLEYIYADSVDVSLEDAVELFIAADQYTLDRLKGLCELSVQKGITADNSASLLHTSDDLRATRLREICMRFVVRHFDTVSKSEGFKVLSRELIFDVLSSR 1503
            + ++DG VYTWGRGDDGRLGHGDNGWK+VPR+VE L  +++ Q TCGSYHTAAVT  GELYTWGGGMYGKLGHGNE+GH TP +V+ ++  G  V Q+ACGSRHTVVL +   VYTWGDKENGV GH +  GHQY P  +  L    + Q++ACGFHTAAL++ G++FT+GEGKFGRLGH  ERNQ V + ++AL+GKR+  VACGGFH+AA+ ESG ++TWGGGEHGQLGHGDKVN+  PT VE L+   ++Q+TCGWSHTV LT  G+V+T+GNGDHGKLGH D  KV+ P L+       V+ VASYNEHT AL    ++    S + SS+  D+R L+D+ + SDVTFIVEG  ++AH+A+L+AR +HFRAMF SGMRES E+++ +  +R+P+F  LLE+IYAD+V  + + A+EL+ AAD YTLDRLKG+CE+ V K IT DN+A+ L  +++L   R+R IC+ F++RHFDTV+K++GF  LSR+LI ++L  R
Sbjct:   48 VLTDDGKVYTWGRGDDGRLGHGDNGWKFVPRLVEDLRDKKVRQVTCGSYHTAAVTVSGELYTWGGGMYGKLGHGNENGHSTPSLVESIK--GLYVRQVACGSRHTVVLLENQDVYTWGDKENGVSGHGDTSGHQYSPYCVSELVEINIKQISACGFHTAALSENGQVFTFGEGKFGRLGHNSERNQPVAKCIDALIGKRIKQVACGGFHTAAVTESGHVFTWGGGEHGQLGHGDKVNQIIPTRVESLIDKNIIQLTCGWSHTVALTDKGEVFTWGNGDHGKLGHNDTNKVTEPKLIETFNSKRVISVASYNEHTVALVNPDANLQN-SVLHSSYKCDMRKLIDNDEFSDVTFIVEGQAIHAHRAILSARSEHFRAMFASGMRESREEKIHLQQIRIPVFLALLEFIYADNVTANPQVAIELYAAADLYTLDRLKGICEVLVHKAITVDNAATYLQAAEELNCDRVRHICLSFIIRHFDTVTKTQGFANLSRDLILEILQIR 545          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1464.3558.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LGK6_ECTSI2.540e-30887.82BTB domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A2D4CB68_PYTIN5.530e-23965.67BTB domain-containing protein (Fragment) n=2 Tax=P... [more]
H3H2V0_PHYRM9.910e-23364.47BTB domain-containing protein n=26 Tax=Peronospora... [more]
A0A5D6YMT2_9STRA7.290e-23064.07BTB domain-containing protein n=1 Tax=Pythium bras... [more]
K3WAD0_GLOUD2.100e-22763.02BTB domain-containing protein n=1 Tax=Globisporang... [more]
T0QPW3_SAPDV5.780e-22663.02BTB domain-containing protein n=4 Tax=Saprolegniac... [more]
A0A1V9ZGJ4_9STRA4.430e-22462.09Regulator of chromosome condensation (RCC1) n=1 Ta... [more]
A0A024URS6_9STRA8.310e-22262.10BTB domain-containing protein n=3 Tax=Aphanomyces ... [more]
W4HDM6_9STRA9.500e-22161.71BTB domain-containing protein n=7 Tax=Aphanomyces ... [more]
F0W8U3_9STRA1.320e-21758.88Regulator of chromosome condensation (RCC1)like pr... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1464contigEcto-sp13_S_contig1464:965..9788 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score723.0
Seed ortholog evalue8.3e-206
Seed eggNOG ortholog2880.D8LGK6
Model size2363
KEGG koko:K11494
Hectar predicted targeting categoryother localisation
Exons14
EggNOG free text desc.guanyl-nucleotide exchange factor activity
EggNOG OGsCOG5184@1,KOG1426@2759
Ec32 ortholog descriptionBTB/POZ
Ec32 orthologEc-10_001680.1
Cds size1308
COG Functional cat.DZ
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03036
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1464.3558.1prot_Ecto-sp13_S_contig1464.3558.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig1464 2001..8899 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462781.89085-UTR-Ecto-sp13_S_contig1464:964..10931681462781.89085-UTR-Ecto-sp13_S_contig1464:964..1093Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1464 965..1093 +
1681462781.9010375-UTR-Ecto-sp13_S_contig1464:1931..20001681462781.9010375-UTR-Ecto-sp13_S_contig1464:1931..2000Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1464 1932..2000 +
1681462782.012935-UTR-Ecto-sp13_S_contig1464:8899..92131681462782.012935-UTR-Ecto-sp13_S_contig1464:8899..9213Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1464 8900..9213 +
1681462782.0210454-UTR-Ecto-sp13_S_contig1464:9245..97881681462782.0210454-UTR-Ecto-sp13_S_contig1464:9245..9788Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1464 9246..9788 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462781.9095585-CDS-Ecto-sp13_S_contig1464:2000..20121681462781.9095585-CDS-Ecto-sp13_S_contig1464:2000..2012Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1464 2001..2012 +
1681462781.920806-CDS-Ecto-sp13_S_contig1464:2216..23451681462781.920806-CDS-Ecto-sp13_S_contig1464:2216..2345Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1464 2217..2345 +
1681462781.9291232-CDS-Ecto-sp13_S_contig1464:2952..31301681462781.9291232-CDS-Ecto-sp13_S_contig1464:2952..3130Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1464 2953..3130 +
1681462781.937475-CDS-Ecto-sp13_S_contig1464:3676..37381681462781.937475-CDS-Ecto-sp13_S_contig1464:3676..3738Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1464 3677..3738 +
1681462781.945733-CDS-Ecto-sp13_S_contig1464:4015..41231681462781.945733-CDS-Ecto-sp13_S_contig1464:4015..4123Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1464 4016..4123 +
1681462781.9542165-CDS-Ecto-sp13_S_contig1464:4501..46241681462781.9542165-CDS-Ecto-sp13_S_contig1464:4501..4624Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1464 4502..4624 +
1681462781.9624796-CDS-Ecto-sp13_S_contig1464:5021..51291681462781.9624796-CDS-Ecto-sp13_S_contig1464:5021..5129Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1464 5022..5129 +
1681462781.9707358-CDS-Ecto-sp13_S_contig1464:5857..60281681462781.9707358-CDS-Ecto-sp13_S_contig1464:5857..6028Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1464 5858..6028 +
1681462781.9790792-CDS-Ecto-sp13_S_contig1464:6398..65381681462781.9790792-CDS-Ecto-sp13_S_contig1464:6398..6538Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1464 6399..6538 +
1681462781.987528-CDS-Ecto-sp13_S_contig1464:7049..71221681462781.987528-CDS-Ecto-sp13_S_contig1464:7049..7122Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1464 7050..7122 +
1681462781.9958441-CDS-Ecto-sp13_S_contig1464:7813..79631681462781.9958441-CDS-Ecto-sp13_S_contig1464:7813..7963Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1464 7814..7963 +
1681462782.0039964-CDS-Ecto-sp13_S_contig1464:8845..88991681462782.0039964-CDS-Ecto-sp13_S_contig1464:8845..8899Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1464 8846..8899 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig1464.3558.1

>prot_Ecto-sp13_S_contig1464.3558.1 ID=prot_Ecto-sp13_S_contig1464.3558.1|Name=mRNA_Ecto-sp13_S_contig1464.3558.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=436bp
MYGKLGHGNESGHPTPCMVKHLRDEGARVTQIACGSRHTVVLTDLGKVYT
WGDKENGVVGHTNADGHQYLPRMLESLQAKTVTQVAACGFHTAALTDAGE
IFTWGEGKFGRLGHGMERNQMVPRMVEALMGKRVGHVACGGFHSAAILES
GELYTWGGGEHGQLGHGDKVNKTSPTLVEGLVSHPLVQITCGWSHTVGLT
ATGKVYTFGNGDHGKLGHGDVRKVSVPTLVAGLVKMHVVKVASYNEHTAA
LAGASSSTPALSSMSSSFMADIRSLLDDQDLSDVTFIVEGSPVYAHKALL
AARCQHFRAMFTSGMRESHEQEVVIPHVRLPIFKVLLEYIYADSVDVSLE
DAVELFIAADQYTLDRLKGLCELSVQKGITADNSASLLHTSDDLRATRLR
EICMRFVVRHFDTVSKSEGFKVLSRELIFDVLSSR*
back to top

mRNA from alignment at Ecto-sp13_S_contig1464:965..9788+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig1464.3558.1 ID=mRNA_Ecto-sp13_S_contig1464.3558.1|Name=mRNA_Ecto-sp13_S_contig1464.3558.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=8824bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1464:965..9788+ (Ectocarpus species13 EcNAP12_S_4_19m)
TTGTTCTCAGAGGACGGCGCTGTGTACACATGGGGGCGGGGAGACGACGG GCGTCTCGGGCACGGAGACAACGGCTGGAAGTACGTGCCGCGGATTGTGG AGGCGCTGGAGGGGCAGCGAATCGTGCAGGTACGCGGTTAGGCGGCTGTG AGTGAACTAAGCCGGGTTACAGAGAGCGCCGTGGCTCGCCCTCGAGTAGG GGTGAAGGTTGGGGCGACGGTAAGTGGGACAGGGTGTGTGCTCGTACTTG TGCATGCCGTAGTCGTTGGACCGTGACCTTGCGTCCCCACAAAGCCGGGA CGGAGCAGGCCGGGTTGAAAATTGGGAGGAGGGGTTCAGGTTTTGAGAGT CTTCAGTGATTCCCGAAAGGAGGCGCGTCTTTGGTTGGTTGGCGAAGATT TGAGATGGTGTCGCGTGTGAGAGACCGGTGGCACGTGCGCTGTGCATGCA GGGTGGGCGAGAGGCGGCTCTTTCTAGCTCTCACCTGTCGTTTGCGTGCC GTCGTACAGTTGTCTTACGCTTTGCCGAAGCTTGCTCAAGTTCGTTTTGA GCTACTGATCGAATGGGGAAAATACGACGATACATTTCACGGCATGTACC TATGAACGTGTTTCACCACGGCGCTCCTATGTGACGTTGTTGTGGCTCTA ACTGCACGCGAACATACGCCTGATTCCAACCTTTCCCGTCGCCACTATTC GCCGCTGTATTGTAGTGGAACTAGAGAATATGGTGGCGTATTCGGTTGCA CGGCGTTACCGTCAGCATCCACGTTTCTCACACCAAGATTGCATGTGTGT GTTTTTTTGTCAAGGTGTGGTCTGTTGGCGTTGTTCTCCTCTTCTTGACG AGACCAGAATGCCAGGTGGCCACAAAGGACTCTCTCGGATGTATGTTTAT AACCCGGTATGCCATTCCTCTGCCCGTCTCCTCCTCTGTTTCCATGTGGA CCCCGTTGCTTCGACAGGCAACATGCGGAAGTTACCACACAGCCGCCGTG ACGGACAAAGGAGAGCTCTACACCTGGGGAGGGGGCATGTACGGGAAGGT GAGATGGACTGCGAGGCTTTACGAGCGATGCGGGCTTAGTACGTTGGCGA AGAGGTTGGCAGGGACGAGGGGCGGCACACGGACGCCTTGGGGTGCTCTT TCGCTTCAGGCTCAAGGCAATGACCGAATTGCCAATTGAATTACGTTACG CAACGCCCGTTTTCCCCTTTTTTCTCTCGGCGGTATTTACCCTGCTCGAC AGCTGGGGCACGGTAACGAGAGCGGGCACCCCACTCCCTGCATGGTGAAG CACCTTCGGGACGAGGGGGCGAGGGTCACGCAGATCGCTTGCGGCAGCCG CCACACCGTCGTGCTCACGGACCTGGGCAAGGTGGGAAAATCGTAGATAA CATGTGGTAGGTGGGTTCCGCAGACGATGAATTACTCCATTTGTTGCGAA TCTATCAAAGACTCTAATCTAGGGAGGAGGTGGGTTTGTGTTGTATGTAA GAAGACAAGAGAAGTGGACACGTACCGCCTCAGAAGTAGCTTTAGAACTA TCTGTAGACAAGAGTCAGTTGTTTGTGTCGGCCCTCGAAGCCCTCCAGGC CACCACACTGCTGTTGCTGATTGGGAGTAGCTTGTTTGCTGCGGTTGTGC TTGGACCGGGGTTTGTGGCGCTCTGTATGACGCTTGGTGGACTTTCTCTT TACTCCACCTCGGCCGTTCTTAACACTATTCATAGGCCCCAAGGGAAAAA ACTAGCCAGCGATTCTGATGGTTCTCGGTTGACTGCTCTCAGTTGCTCGG AGTAAGACCGGCCGTTGTCTGCTCCCAAGGAACTGATTCCAAGAGCGCGA GTAAAGACGTCTCCGCACTTCGTGCACAAGAAGAGTACAGGTTGTGTCTG CAAACCACAGAGGGGTGGTGCGCCCGCTGTCCTGCCTGTTTGCGACCGAA CTCCCATCACCGCCGCCGCCGCCGCTTTTCCTGAGCAGGTGTACACGTGG GGGGACAAGGAGAACGGGGTGGTGGGGCACACCAACGCGGACGGCCACCA GTACCTGCCCCGCATGCTGGAGTCCCTGCAGGCCAAGACGGTGACGCAGG TGGCGGCGTGCGGCTTCCACACGGCTGCCCTCACTGACGCGGGGGAGATC TTCACCTGGGGGGAAGGTACGGGTAACGCTTGCTGCTGCTGCTGCTTTCG GTAATGCACGGCTCTTCGCGGTGGGACCGTGTTGTTGCGTTGTGGGGAAG AACTAAGAAATATGGGAAGAGTTTGTACAAGGCGGAGTATTTGTGGTTTG CTGTTTGTTATTTTTAGCAGTGGTTCTGCGGGCTGACCGTGGGCAGCATC CGCAGGGGTGCCAGATGCTGTAGGGGAGGGTCAACTGGCCGCACGGAAGT GTCAAAGGAAGGCGGTCCGACAAATACTGTGCCGCGCGGGTAAATCAATC TTACGGTGGTCCTAGACCTTGTTGATTCATGGTGCCTGCTCACCCTCTCA ACCTCTGCTCGCATTTTTCTTTCGCCAGTGAAGACATGAGGGTAAAACAC GTCCTGCTGTGGGCAGAGATGCAGGGGTCAACATTGATATGCCGTACCCT TTGTGTTGTGTTTATTGCCTGTCTTTGTGGTAGGGAGCATCTTGCTGTGA GAACCGGAAGCGTTCAAAAGCCATAACACCACTCCTCTGCCCCCCCCCCT CCACTTGTCTAGGAAAATTCGGACGCTTGGGTCATGGAATGGAACGAAAT CAGATGGTGCCCCGAATGGTGGAGGTGAGCGAACGGCGCAGCGCATCTGC TTCGCCTGATTTTCTCTACGCGGCCGATGGACTTGAGGGGAGGGCCGAGG GGGGAAGGGACATTCTCCACTGCTGTTGATGGCCAGCGTCCGGCGCTTCG GAAGGATGCACACTCACGAAACGATTCTCTCTAGATCCACACGGCCGTGT TTCTTCGAAAACATTGTCGTTGTCTTGTTTTGTGACGTCGAGGCCCCCCA CCGTGATCTCCGCTTTTTCTTTCCGCGGGTCTCCCGGCGTGATTGTTGCA GGCGTTGATGGGGAAGCGGGTGGGACACGTGGCGTGCGGAGGCTTTCACT CGGCGGCGATTTTGGAGTCAGGGGAACTCTACACTTGGGGCGGCGGCGAG CATGGTCAGGTGTGTGGACTGCTGTTGTGTCGTTCCTCTGTCGTTGTCAT TGTTGCTTTTGTTTTTGTCCTTGGATAGAAGCTGGAGTGGTCTGGAACAA GGTTGTTGTTATTATTGTTGTTGTTGTTGTGGTGGTTGTGGTTTCACGTT GGTTTGTTTCGTATCTCGTATCCTTGGCAGAGGTAAGGGTTGGAACACGG GGGATTTGTTACAGCTTGGGCTGCCCCGCATGTTCAACTGCTGTTACGCA TTCCATCTTTCCTCCCCCTACTCTGAAGCCGAAGGGCACCCAGAAAAGTG AAGAAAGAAAGCTAGCCTTCCCTATTTACAAACCGAACGCCTTCTCCCTT TTGTTCGCTGCACACGTGCGGGGGGGGGGGGGTTCAGCTCGGACACGGAG ATAAGGTGAACAAGACGTCGCCCACCCTGGTGGAAGGCCTGGTCTCGCAT CCCCTCGTGCAGATCACGTGCGGCTGGAGTCATACCGTCGGTCTGACGGC CACGGGCAAGGTGACAAGACGCGGGGACGGGGGGAGGGGGGGGTCACATG GCAGTTTTCGTGTTTGCCGTACGTTATTTGTTTGTTTGCGGCCGATGGAT TCTTTGCCCTGAGCAGGCCAACGTGATCTTGGCCCGTGTCGGCAAAAACG AAAAGAGGGCCGTGCTTGTGCTTCGGCTCTCGTCGCAAATGGCTTGTGTT TTACAACAGTTATCGACGTCGTGAACAGGGGGCGCACCCGCTTTGCTTGG TGTTTTTCCCGAGATCTTGTTTTCGCCTTCTTTACCTGTTCCGCATTGTC AATCGCCGGCTTCTGTTCTTTTTGTACCTTGGTGTACCCTCTGGGTGCGT TCCTAGTGCTGTTCCAACCGCTTCTTGTCATGTGTGTTGTGTCGTGCGTA ACGGTAGGTTTATACCTTCGGGAACGGGGACCACGGCAAGCTGGGCCACG GGGATGTGAGAAAAGTCTCGGTGCCTACCCTCGTGGCTGGACTCGTCAAA ATGCACGTCGTCAAGGTGTGTGTGTGTGTGTGTGTTTGTGTTTCTTGGAC TTGCATCGACCGCGCTACCCGGCTGACCAATGAAATGACATTAGTCTCAT TGTGCGGCAGAAAACGGGGGAACATTTTGTAACGGCCGTGACCCGGGGCC CCATGAGGGGAGAGTTCCAATGTGTATGTGTGCGTGTTTCTCTGTGCTTG GCACTGACCGCGCTGTTCGGCTGATCAATGAGAGAGTGTCAGTCTTGTAG TAGTGTGTGTGTGGGCGAGCACTGCCGTTATGTCTTCTACATACTTTTGT TCTGAAATAGAGATCGAGAGGAGCATGCCCCATTACCTCTGGCATTCTCA CGTTGTGGGTTGCGGGAAGGTGTGGGCGTGGTTCCACCCATCCGAAAGGT ATCCAATATAAGCACTTTGGATTGGGGGAGAGACAACAGCGTTTGTGTGG GAAGGAAGCTATCCACGTACCAGAGCCATGCCTTTATAACGGCGCATTCC TAAGGTCGCGCAGAAAAACAAACCCGTGGCCTCACATATTCCGTGTAGAG CCTCACCGATCGCCGCCCACGCGTTGTGCGTGCTGGGTTGGCATGTGTAC ACCACGTGTCTCCTCCTCCTCCTCCTCCTCCTCCTCCTGCTGCTGCTGCT GCTGCTGCTACTGCTGCTGCTGCTGCTGCTGCTGCTACTGCTGCTGCTGC TAATTTCCCCCTGTTGTGCGTCCGTCTGAACGCCTACCTGAAGGTGGCGT CGTACAACGAGCACACGGCAGCGTTGGCGGGAGCGAGCTCGTCCACACCG GCGTTGAGTTCCATGTCTTCGTCGTTCATGGCGGACATCCGATCACTCCT CGACGACCAGGACCTCTCAGACGTTACTTTCATCGTGGAGGGGAGCCCGG TGTACGCGCACAAGGTGTGTACAGGTCGTCGGCAACGCATGGCGGGGGTG GGGATGGCTAACACGGAGCTAGCTGTGTTCTGTGGGCGCGCGTGCACACG TGCATGCGTACTAGATGGTTGGCTTCCTGGTTCTCTGAAAGAGCACCGGC GACTTCCATCGCACGGCATGGCGTACATGACGAGGCGGCTCCGGTTTCGG CCTCAATCCCCCCTGGGTTCCGCCAAAACGTTCGCTAAACTGTCCTGTGC CCTTCTTTATGTTTTATTTCGTTGTAGTGTTGCTGCGCTCACCCTCTTCA CCGACACGCCTTCCCCCTCCCTACCGACGCCTCTCCCGCCTGCAAACCAC GGCGTGTACCACCATGTTTCGACCCGGGGCGAAGGCTCTACTGGCGGCGC GCTGCCAGCACTTCCGCGCGATGTTCACATCGGGTATGCGGGAGAGCCAC GAGCAGGAGGTGGTCATCCCGCACGTCCGGCTACCGATCTTCAAGGTCCT CCTGGAGTACATCTACGCCGACAGGTGCACAAACTAAAGACGCCACTTGG CCGCTTTGAGTGGGGTCATCTACGTTTTGTCGGGTACAGCAGTGGTCAGA TCGAGTCTGGTCCGTCCTGGTGTATGTGCGAGTTTTTTCGTTTTTTTTCG GCTTTGTGTTGACAGTGATCTGTTGTGACGTCTGTGTGGCCATGTGCTGT GTTGTCACTTTTCGATCGTCATTTTTCGCGCCAGCCAAACCTCGCCCTTC GAGCCTTTGGGGCGGTCATCAAAAAACAAGATTTATATTGCAAGGTTTAT CCATGCTCTCCGAAATACTGAACTTGCAGAGAGAGAGAGAGATTTGGCGG TCCCTGCTGTACTTGACTTGCAAAGAGCGAGAGAGATTGAGAGAGGGCGA GAGTAAGGGAGAGACGAGAGAGAACAGAGTGAACGACAGTAAACCGCCCT TCTACTTTTACCTCTTCGTCTGTGCGTGCTCTCGCTTTTTCTTTCCTTCC CTTGGCTCTCTTACGTCCTGCCGCGCCATTGGCAGCGTCGATGTGTCGCT CGAGGACGCGGTGGAGCTGTTCATCGCAGCGGACCAGTACACGTTAGATC GTCTCAAGGTACGCTTGTTTTGTCGCCGGCGAGGGGTGGGGGATCTTTTA CGGGATCTTGAACTCACTGGCGAACTTTTTCTCGCTCATGTCTTGCGTTT TGTCGCAAATTGTTTTATTCGTGTGAAACAAGACGACTGGGGGTGTGTTT GGTGAAAAGCGATGATGCTTGTATGCGGTCTGAATTGGGTTCTTGGATGC TTCGCCTTGCCGCTGGTTTACGTTTTTCTGAGATGCCCTTAGAACCGCTT ACCACTATATACTCCTGTTCCGCTTTGCCTGTGTGCACACGTTTCAGGTA GAGGTAGAAAGTGTCATTCATCCGTCATGCCTGGGTTATTTTTTTCTTCG GTTCATGGTGTCCTCGCTAGCGAAGGCACCACGTGTGCGATGCTGATGCA TAAGTTGACGGGTTTTTTGAAAGCACAAACCGGTTTGCATCGGTACATAT CAAGTATGAACATCAAGTGTTGCCGGAAGGTACCACTGGTTGGCCGTAGC GAGGAAGGCCTCGACTACGTGCAATCACCCCGTGACTTGCTCCGTGCAGG TCTACCAAGTTCCTTCGTCAATTGCTTCGCCCCCCCGGCCACCCCCCCCC CCCCCCCCCCCCCCCCGAAGAACATTGTTTTCTCCTCTGATGTAGACTTT CTGTGTACGATGTATCCCCTTTGCATTGCCCGTTCAACCTGCCCGGCAGG GACTGTGCGAGCTATCCGTGCAGAAGGGAATAACCGCGGATAACTCCGCC TCCCTCCTGCACACCAGCGACGACCTCCGCGCGACCCGCCTGCGAGAGAT TTGCATGCGCTTTGTCGTGCGACACTTCGACACCGTCTCAAAATCAGAGG TGGGCTGTCACACAACGTATCTCTGATGAATGTGCAAGATGGGCTCTATG CAGCCGCTGCCTTCCATGTTTCGAAACCCTCTCCTGGGCGTCCTCGTTTG GACTGACTGAGAAGGAGATTCACCACAGGGGTCCTGCGTTTTTCGTTTGT GCTTGCGGAGCTGTTTCGCTTCATGGCGTGGATGGATGCTACGCCCGGTA TTCGCGTACAGTGTTAAATGTGTGCAAGCACGGCCGGCGAAGCATTCCGC TCACTTCCAGAACTGGTTTTTGCGTATACTATGGAGTAGTGTGCAGGCAA GCCCAGTGAAACGTCCCGCTCAGGACAACACGTCAGTTTCGCAGGACGTT GGAGCTGAAATGGCAACAGCCAGTAGAGCCCGTTACAAGCTAGCCGTCGA GAGGATGCACTAAGGCTGCTACTGATAGTCGACACATGTGGCGTGTCTTC TTCTTTTCCACATGACGTTCACACGACGACGCCAACATGGCACTGGTGTA TCAGCTTTCGTTGGGAGTAACAAAGCTGCCTACCTTCAGAATGATGCTCG TTGGAGCTGAAATGGCAACAGCCAGTAGAGCCCGTTACAAGCTAGCCGTC GAGAGGATGCACTAAGGCTGCTACTGATAGTCGCCACATGTGGCGTGTCT TCTTCTTTGCCACATGACGTTCGCACGACGACGCCGACATGGCACTGGTG TATCAGCTTTCGTTGGGAGTAACAAAGCTGCCTACCTTCAGAATGATGCT CGTTCTGCGGCATGCAAGACTCACAAGCGGTTTTTCTCTTGCCTCCCCTG CCCCCTCCTGCACCCTTCGCTTGCGCCCCCCATCATGTGGGTATCCCCCC CTGTTTGATGTTGGTGGCCGGTTTCTTACAGGGATTCAAGGTCTTGAGCC GTGAGTTGATATTCGATGTGCTCAGCAGCCGATGACTCATCGAAAACGGC TCGCACGCAGTACGCTCGGGTTTTTGGAGAGTCGCACAGCAGCAGTGACG GGGATTATAGCTCTAGCGTAAATCCGTGGTGGTAGTGTTCGCCTGTGCGT CGGGTTTGTGCCAATCGATGGACCGGGCATGTTTTTGTTTGTGCCTTGCT GCCGCTGCTGCTACTTGCTGGGAGGGAGGTTTCAGAGAGAGAGGGTCCCA TGAGGGCGCACGGACCGTTTTGTAGATTGGAGTGTGTTGTAATACTACGA CAAATGTTTTCGTTTTTTTTTTTTTTCCGACGTGTGTGTGTGTGTGTCTG TGTGTGTGAGTCCGTTTCGCCCGCCAGGGAGTGGTTTTCTTCGGGTCGAC AAGCCCTCGACGTAAGGAGGAGGAGGAGCAGTAAAGAAGTAGAGAATTGT TCTTGTGCATAGGGGATCATCATCCCGCCGTACGATTTTGTTTCATGATG CACAAGGCGCCTTAGCGGTAGTGCCCACGTGGCCTCAAATGACGCCTCGT TGTGTTCGTGCTGTTTGTTTTTGTTGTGTCTCGCGCGGGGCGGTAGTTGG CGACGGACATACTCGTGCAGCTAGCGGTGTCGTTTGCTTGTCGACTACAA ACGCGTGGTATTGTTTTTGTCCCTCAATATTCACCACCTCTTTGCCGTGT CCAACTTCATTCAAATATGGTTTCCGTTCTCGATGAATGCACGGAACCAT GTTTGTGACGGGTTGTCACGGCGAGCGGTGTGGAGACAATGTAGCTCATG GCGAGCAGAACCAACTGTGACGAATCACACGAAGGCGGAGCCGTTGTCGG TAGATTATCGTTTGATATTATGTGTGTTTCTTTCACATGATGACTGTAAG CAGAAATAAAAAGTTCCTCACCCC
back to top

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1464:965..9788+

>mRNA_Ecto-sp13_S_contig1464.3558.1 ID=mRNA_Ecto-sp13_S_contig1464.3558.1|Name=mRNA_Ecto-sp13_S_contig1464.3558.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1308bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1464:965..9788+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGTACGGGAAGCTGGGGCACGGTAACGAGAGCGGGCACCCCACTCCCTG
CATGGTGAAGCACCTTCGGGACGAGGGGGCGAGGGTCACGCAGATCGCTT
GCGGCAGCCGCCACACCGTCGTGCTCACGGACCTGGGCAAGGTGTACACG
TGGGGGGACAAGGAGAACGGGGTGGTGGGGCACACCAACGCGGACGGCCA
CCAGTACCTGCCCCGCATGCTGGAGTCCCTGCAGGCCAAGACGGTGACGC
AGGTGGCGGCGTGCGGCTTCCACACGGCTGCCCTCACTGACGCGGGGGAG
ATCTTCACCTGGGGGGAAGGAAAATTCGGACGCTTGGGTCATGGAATGGA
ACGAAATCAGATGGTGCCCCGAATGGTGGAGGCGTTGATGGGGAAGCGGG
TGGGACACGTGGCGTGCGGAGGCTTTCACTCGGCGGCGATTTTGGAGTCA
GGGGAACTCTACACTTGGGGCGGCGGCGAGCATGGTCAGCTCGGACACGG
AGATAAGGTGAACAAGACGTCGCCCACCCTGGTGGAAGGCCTGGTCTCGC
ATCCCCTCGTGCAGATCACGTGCGGCTGGAGTCATACCGTCGGTCTGACG
GCCACGGGCAAGGTTTATACCTTCGGGAACGGGGACCACGGCAAGCTGGG
CCACGGGGATGTGAGAAAAGTCTCGGTGCCTACCCTCGTGGCTGGACTCG
TCAAAATGCACGTCGTCAAGGTGGCGTCGTACAACGAGCACACGGCAGCG
TTGGCGGGAGCGAGCTCGTCCACACCGGCGTTGAGTTCCATGTCTTCGTC
GTTCATGGCGGACATCCGATCACTCCTCGACGACCAGGACCTCTCAGACG
TTACTTTCATCGTGGAGGGGAGCCCGGTGTACGCGCACAAGGCTCTACTG
GCGGCGCGCTGCCAGCACTTCCGCGCGATGTTCACATCGGGTATGCGGGA
GAGCCACGAGCAGGAGGTGGTCATCCCGCACGTCCGGCTACCGATCTTCA
AGGTCCTCCTGGAGTACATCTACGCCGACAGCGTCGATGTGTCGCTCGAG
GACGCGGTGGAGCTGTTCATCGCAGCGGACCAGTACACGTTAGATCGTCT
CAAGGGACTGTGCGAGCTATCCGTGCAGAAGGGAATAACCGCGGATAACT
CCGCCTCCCTCCTGCACACCAGCGACGACCTCCGCGCGACCCGCCTGCGA
GAGATTTGCATGCGCTTTGTCGTGCGACACTTCGACACCGTCTCAAAATC
AGAGGGATTCAAGGTCTTGAGCCGTGAGTTGATATTCGATGTGCTCAGCA
GCCGATGA
back to top