mRNA_Ecto-sp13_S_contig14638.3557.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig14638.3557.1 vs. uniprot
Match: D7FXL2_ECTSI (Sexually induced protein 3 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXL2_ECTSI) HSP 1 Score: 318 bits (814), Expect = 4.180e-109 Identity = 146/153 (95.42%), Postives = 147/153 (96.08%), Query Frame = 1
Query: 1 RGAAWAMEVVAANDAHPEVECSAKGTCDRATGICACFENYEGVACERTICPNDCSGNGFCFTEKQLAADAGGTYNTPWDAEKQVGCKCDAGFRGPDCSLQECPSGADVMGGDGSTEGRDCSGRGECICDYTTGLCGCFLGFYGTMCEYQTILS 459
+GAAWA E VAANDAHPEVECSAKGTCDRATGIC CFENYEGVACERTICPNDCSGNGFCFTEKQLAADAGGTYNTPWDAEKQVGCKCDAGFRGPDCSLQECPSGADVMGGDGS EGRDCSGRG ICDYTTGLCGCFLGFYGTMCEYQTILS
Sbjct: 62 KGAAWAKEAVAANDAHPEVECSAKGTCDRATGICTCFENYEGVACERTICPNDCSGNGFCFTEKQLAADAGGTYNTPWDAEKQVGCKCDAGFRGPDCSLQECPSGADVMGGDGSIEGRDCSGRG--ICDYTTGLCGCFLGFYGTMCEYQTILS 212
BLAST of mRNA_Ecto-sp13_S_contig14638.3557.1 vs. uniprot
Match: A0A7S2WLA1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WLA1_9STRA) HSP 1 Score: 238 bits (608), Expect = 2.020e-77 Identity = 104/153 (67.97%), Postives = 123/153 (80.39%), Query Frame = 1
Query: 1 RGAAWAMEVVAANDAHPEVECSAKGTCDRATGICACFENYEGVACERTICPNDCSGNGFCFTEKQLAADAGGTYNTPWDAEKQVGCKCDAGFRGPDCSLQECPSGADVMGGDGSTEGRDCSGRGECICDYTTGLCGCFLGFYGTMCEYQTILS 459
+ AAW AAN+AHPEVECS KG C+R TG C CFENY+G+ACERT+CPNDCSG G C+T+KQLAA+A TY PWDA K VGC CD G+RGPDCSL+ECPSG DV+ GDG+ +GRDCSGRG ICDY+TGLC CF G++GT C++QTIL
Sbjct: 84 KAAAWVAVATAANEAHPEVECSNKGLCNRKTGECECFENYDGIACERTVCPNDCSGRGICYTQKQLAAEASMTYTEPWDAMKHVGCVCDLGYRGPDCSLEECPSGPDVLLGDGNEKGRDCSGRG--ICDYSTGLCKCFTGYFGTKCQHQTILG 234
BLAST of mRNA_Ecto-sp13_S_contig14638.3557.1 vs. uniprot
Match: A0A7S2BSV2_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BSV2_9STRA) HSP 1 Score: 235 bits (599), Expect = 2.290e-76 Identity = 102/153 (66.67%), Postives = 122/153 (79.74%), Query Frame = 1
Query: 1 RGAAWAMEVVAANDAHPEVECSAKGTCDRATGICACFENYEGVACERTICPNDCSGNGFCFTEKQLAADAGGTYNTPWDAEKQVGCKCDAGFRGPDCSLQECPSGADVMGGDGSTEGRDCSGRGECICDYTTGLCGCFLGFYGTMCEYQTILS 459
+ AAW AAN+AHP VECS KG+C+R TG C CF+NY+G+ACERT+CP DCS +GFC+TEKQLAADA TY PWDA K VGC CD G+RGPDCSLQECPSG DV+ GDG+++GRDCSGRG IC+Y GLC CF G++GT C++QTIL
Sbjct: 62 KSAAWVAVATAANEAHPSVECSNKGSCNRKTGECDCFDNYDGIACERTVCPGDCSNHGFCYTEKQLAADASKTYTKPWDAMKHVGCVCDLGYRGPDCSLQECPSGVDVLKGDGNSKGRDCSGRG--ICNYGAGLCKCFTGYFGTKCQHQTILG 212
BLAST of mRNA_Ecto-sp13_S_contig14638.3557.1 vs. uniprot
Match: A0A812W0K4_SYMMI (Tnc protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812W0K4_SYMMI) HSP 1 Score: 232 bits (592), Expect = 2.410e-75 Identity = 106/153 (69.28%), Postives = 118/153 (77.12%), Query Frame = 1
Query: 1 RGAAWAMEVVAANDAHPEVECSAKGTCDRATGICACFENYEGVACERTICPNDCSGNGFCFTEKQLAADAGGTYNTPWDAEKQVGCKCDAGFRGPDCSLQECPSGADVMGGDGSTEGRDCSGRGECICDYTTGLCGCFLGFYGTMCEYQTILS 459
+ AAW +V AN+AHP VECS KG CDR TG C CFENYEG+ACERT+CPN CS G CFTEKQLAA+A Y++PWDAEK VGC CD G RGPDCSL ECPSGADV+ G G+ GRDCSGRG +CDYT G C CF G+YGT CEYQTIL
Sbjct: 59 KSAAWIGDVAGANNAHPVVECSNKGICDRETGECQCFENYEGIACERTVCPNSCSDAGVCFTEKQLAAEASRDYDSPWDAEKHVGCICDLGRRGPDCSLVECPSGADVLKGYGNEAGRDCSGRG--LCDYTDGTCSCFHGYYGTKCEYQTILG 209
BLAST of mRNA_Ecto-sp13_S_contig14638.3557.1 vs. uniprot
Match: A0A7S0SS37_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SS37_9STRA) HSP 1 Score: 229 bits (585), Expect = 3.090e-74 Identity = 103/150 (68.67%), Postives = 118/150 (78.67%), Query Frame = 1
Query: 10 AWAMEVVAANDAHPEVECSAKGTCDRATGICACFENYEGVACERTICPNDCSGNGFCFTEKQLAADAGGTYNTPWDAEKQVGCKCDAGFRGPDCSLQECPSGADVMGGDGSTEGRDCSGRGECICDYTTGLCGCFLGFYGTMCEYQTILS 459
AW EV NDAHP ECS KGTCDR TG C C+ NY+G+AC+RTICPN CS +G CFTE QLA++AG TY+TPWDA K VGC CD G RGPDCSL ECPSGADV+GG G+ GRDCSGRG ICDY++G+CGCF G+YG CEYQT+L
Sbjct: 65 AWVGEVSNTNDAHPLTECSNKGTCDRKTGQCICYPNYDGIACDRTICPNRCSESGVCFTEYQLASEAGRTYSTPWDANKYVGCVCDLGRRGPDCSLLECPSGADVLGGYGNETGRDCSGRG--ICDYSSGICGCFHGYYGHRCEYQTVLG 212
BLAST of mRNA_Ecto-sp13_S_contig14638.3557.1 vs. uniprot
Match: A0A835ZIV1_9STRA (Sexually induced protein 3 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIV1_9STRA) HSP 1 Score: 229 bits (584), Expect = 4.380e-74 Identity = 100/154 (64.94%), Postives = 121/154 (78.57%), Query Frame = 1
Query: 4 GAAWAMEVVAANDAHPEVECSAKGTCDRATGICACFENYEGVACERTICPNDCSGNGFCFTEKQLAADAGGT---YNTPWDAEKQVGCKCDAGFRGPDCSLQECPSGADVMGGDGSTEGRDCSGRGECICDYTTGLCGCFLGFYGTMCEYQTIL 456
G AW E+V A+ HP + CSAKG C+R TG+C C+E YEG+ACERT+CPN+CSGNGFC+T++QL D G+ Y PWDA+K VGCKCD G+RGPDCSL+ECP+G D MGG G+ +GRDCSGRG ICDYT+GLC CF GF+GT CE QTIL
Sbjct: 60 GIAWVSEMVEASGEHPVLTCSAKGNCNRETGVCDCYEGYEGIACERTVCPNNCSGNGFCYTQQQLVDDLAGSNIEYTQPWDAQKHVGCKCDPGYRGPDCSLRECPTGPDQMGGSGAAQGRDCSGRG--ICDYTSGLCKCFHGFFGTKCEQQTIL 211
BLAST of mRNA_Ecto-sp13_S_contig14638.3557.1 vs. uniprot
Match: C4B7Q8_OCHDN (Tubular mastigoneme protein n=1 Tax=Ochromonas danica TaxID=2986 RepID=C4B7Q8_OCHDN) HSP 1 Score: 228 bits (581), Expect = 1.140e-73 Identity = 103/153 (67.32%), Postives = 117/153 (76.47%), Query Frame = 1
Query: 1 RGAAWAMEVVAANDAHPEVECSAKGTCDRATGICACFENYEGVACERTICPNDCSGNGFCFTEKQLAADAGGTYNTPWDAEKQVGCKCDAGFRGPDCSLQECPSGADVMGGDGSTEGRDCSGRGECICDYTTGLCGCFLGFYGTMCEYQTILS 459
+ +AW +V ANDAHP VECS KG CDR TG C CF NY+G+ACER ICPN CS G CFT+KQLA DA TY TPWDAEK+VGC CD G RGPDCSL ECPSG DV+ G GS GRDCSGRG +CDY++G+C CF G+YGT CEYQT+L
Sbjct: 59 KSSAWVGDVQNANDAHPVVECSNKGVCDRKTGECKCFANYDGIACERPICPNKCSDAGVCFTQKQLAVDAARTYATPWDAEKEVGCVCDLGRRGPDCSLFECPSGPDVLKGFGSEAGRDCSGRG--LCDYSSGICNCFHGYYGTKCEYQTVLG 209
BLAST of mRNA_Ecto-sp13_S_contig14638.3557.1 vs. uniprot
Match: B8CC41_THAPS (Sig3-like protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CC41_THAPS) HSP 1 Score: 227 bits (579), Expect = 2.440e-73 Identity = 98/153 (64.05%), Postives = 119/153 (77.78%), Query Frame = 1
Query: 4 GAAWAMEVV-AANDAHPEVECSAKGTCDRATGICACFENYEGVACERTICPNDCSGNGFCFTEKQLAADAGGTYNTPWDAEKQVGCKCDAGFRGPDCSLQECPSGADVMGGDGSTEGRDCSGRGECICDYTTGLCGCFLGFYGTMCEYQTILS 459
G+AW+ E ANDAHP ECS KGTCDR +G C CFENY+G ACERT+CPNDCSG G C T+K LA G TY TPWDAEK +GCKCD G+RGPDCS +ECPSG D++GGDG+ +GR+CSGRG C ++ TGLC CF G++G C++QT+LS
Sbjct: 61 GSAWSSETTNGANDAHPHAECSNKGTCDRNSGECVCFENYDGKACERTLCPNDCSGRGICLTQKALAIFQGATYETPWDAEKHLGCKCDVGYRGPDCSRKECPSGEDILGGDGAVKGRECSGRGNC--NFITGLCQCFDGYFGNKCQHQTVLS 211
BLAST of mRNA_Ecto-sp13_S_contig14638.3557.1 vs. uniprot
Match: A0A7S0K9U2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus aporus TaxID=1398097 RepID=A0A7S0K9U2_9STRA) HSP 1 Score: 221 bits (562), Expect = 1.220e-71 Identity = 96/151 (63.58%), Postives = 116/151 (76.82%), Query Frame = 1
Query: 4 GAAWAMEVVAANDAHPEVECSAKGTCDRATGICACFENYEGVACERTICPNDCSGNGFCFTEKQLAADAGGTYNTPWDAEKQVGCKCDAGFRGPDCSLQECPSGADVMGGDGSTEGRDCSGRGECICDYTTGLCGCFLGFYGTMCEYQTIL 456
G AWA VV+ ++AHP ECS KGTCDR G C CFENYEG ACERTICPNDCSG G C T+ LA+ G Y+ PWD+ K VGCKCD G+RG DC+ +ECPSG DV+GGDG+++GR+CSGRG +CDYT GLC CF G+YG C++QT+L
Sbjct: 1 GDAWAGAVVSEDNAHPLAECSNKGTCDRTKGECVCFENYEGKACERTICPNDCSGRGVCMTQGALASTFGADYDDPWDSNKHVGCKCDVGYRGVDCTQKECPSGEDVLGGDGASKGRECSGRG--LCDYTKGLCSCFTGYYGDRCQHQTVL 149
BLAST of mRNA_Ecto-sp13_S_contig14638.3557.1 vs. uniprot
Match: F0Y4Z3_AURAN (EGF-like domain-containing protein n=2 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y4Z3_AURAN) HSP 1 Score: 219 bits (557), Expect = 9.960e-70 Identity = 97/151 (64.24%), Postives = 113/151 (74.83%), Query Frame = 1
Query: 10 AWAMEVVAA-NDAHPEVECSAKGTCDRATGICACFENYEGVACERTICPNDCSGNGFCFTEKQLAADAGGTYNTPWDAEKQVGCKCDAGFRGPDCSLQECPSGADVMGGDGSTEGRDCSGRGECICDYTTGLCGCFLGFYGTMCEYQTILS 459
AW VA N+ H ECS G CDR +G C CF+ YEG+ACERT CPNDCS G C+T+KQLA +A TY+TPWDA K VGC CD GFRGPDCSLQECPSG DV+ GDG+T+GRDCSGRG +CDY +GLC CF G+YGT C+ QT+L
Sbjct: 82 AWVKYPVAGENNVHESTECSNMGICDRKSGECECFDGYEGIACERTSCPNDCSARGICYTQKQLATEAATTYDTPWDAMKHVGCVCDLGFRGPDCSLQECPSGTDVLSGDGNTKGRDCSGRG--LCDYDSGLCKCFSGYYGTKCQQQTVLG 230 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14638.3557.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig14638.3557.1 >prot_Ecto-sp13_S_contig14638.3557.1 ID=prot_Ecto-sp13_S_contig14638.3557.1|Name=mRNA_Ecto-sp13_S_contig14638.3557.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=148bp MEVVAANDAHPEVECSAKGTCDRATGICACFENYEGVACERTICPNDCSGback to top mRNA from alignment at Ecto-sp13_S_contig14638:748..2235+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig14638.3557.1 ID=mRNA_Ecto-sp13_S_contig14638.3557.1|Name=mRNA_Ecto-sp13_S_contig14638.3557.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1488bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14638:748..2235+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig14638:748..2235+ >mRNA_Ecto-sp13_S_contig14638.3557.1 ID=mRNA_Ecto-sp13_S_contig14638.3557.1|Name=mRNA_Ecto-sp13_S_contig14638.3557.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=444bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14638:748..2235+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |