mRNA_Ecto-sp13_S_contig14627.3552.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig14627.3552.1
Unique NamemRNA_Ecto-sp13_S_contig14627.3552.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig14627.3552.1 vs. uniprot
Match: D7FJZ2_ECTSI (Proline iminopeptidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJZ2_ECTSI)

HSP 1 Score: 409 bits (1051), Expect = 2.950e-139
Identity = 197/204 (96.57%), Postives = 199/204 (97.55%), Query Frame = 1
Query:    1 RELVLTKHVGDKDRPFLLFLQGGPGFPAPRVSRPEGWWGRALKEFRVIMLDQRGTGRSSPVTHRTLAEMDGPETQAKFLGNFRADSIVEDCEAVRGELAGGDAKWTVLGQSFGGFCLLTYLSKYPDSLSAGLFTGGLPPVGRTPDEVYRATYRRVAERNRRFYKRYPGDVDKVKAILRHVRDRDVELPAGGVLTPGRFLQLGLA 612
            RELVLTKHVGDKDRPFLLFLQGGPGFPAPRVSRPEGWWGRALKEFRVIMLDQRGTGRSSPVTH+TLAEMDGPETQAKFL NFRADSIVEDCEAVR ELAGGDAKWTVLGQSFGGFCLLTYLSK+P SLSAGLFTGGLPPVGRTPDEVYRATYRRVAERN RFYKRYPGDVDKVK ILRHVRDRDVELPAGGVLTPGRFLQLGLA
Sbjct:  147 RELVLTKHVGDKDRPFLLFLQGGPGFPAPRVSRPEGWWGRALKEFRVIMLDQRGTGRSSPVTHKTLAEMDGPETQAKFLENFRADSIVEDCEAVRRELAGGDAKWTVLGQSFGGFCLLTYLSKHPGSLSAGLFTGGLPPVGRTPDEVYRATYRRVAERNSRFYKRYPGDVDKVKTILRHVRDRDVELPAGGVLTPGRFLQLGLA 350          
BLAST of mRNA_Ecto-sp13_S_contig14627.3552.1 vs. uniprot
Match: A0A835ZBB4_9STRA (Proline iminopeptidase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBB4_9STRA)

HSP 1 Score: 267 bits (682), Expect = 9.370e-85
Identity = 130/213 (61.03%), Postives = 164/213 (77.00%), Query Frame = 1
Query:    1 RELVLTKHVGDKDRPFLLFLQGGPGFPAPRVSRPEGWWGRALKEFRVIMLDQRGTGRSSPVTHRTLAEMDGPETQAKFLGNFRADSIVEDCEAVRGELAG-------GDAKWTVLGQSFGGFCLLTYLSKYPDSLSAGLFTGGLPPVGRTPDEVYRATYRRVAERNRRFYKRYPGDVDKVKAILRHVRDRD---VELPAGGVLTPGRFLQLGL 609
            RELVL ++  D++ P  +FLQGGPGFP+PR   P GW GRALK+FRV++LDQRGTG+S+PVT   +A M+ PE QA++LG+FR+D+IV DCEA+R  L            KWTVLGQS+GGFCL TYLS++PD++ AGLFTGGLPP+ R  DE+YRATYRR AERNRR+Y RYPGDV KVK+IL+ + ++    + LP GG+LTP RFLQLGL
Sbjct:   46 RELVLGRNAKDQNLPMCIFLQGGPGFPSPRTMGPGGWVGRALKDFRVLLLDQRGTGKSTPVTAAGMALMESPEAQAEYLGHFRSDNIVSDCEAIRKMLLADPNDSEAAPKKWTVLGQSYGGFCLATYLSRHPDAIEAGLFTGGLPPL-RDVDEIYRATYRRCAERNRRYYARYPGDVSKVKSILQFLAEQPRGGMPLPGGGLLTPRRFLQLGL 257          
BLAST of mRNA_Ecto-sp13_S_contig14627.3552.1 vs. uniprot
Match: A0A6H5K0A7_9PHAE (AB hydrolase-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0A7_9PHAE)

HSP 1 Score: 254 bits (649), Expect = 3.570e-81
Identity = 127/137 (92.70%), Postives = 129/137 (94.16%), Query Frame = 1
Query:  205 MDGPETQAKFLGNFRADSIVEDCEAVRGELAGGDAKWTVLGQSFGGFCLLTYLSKYPDSLSAGLFTGGLPPVGRTPDE-VYRATYRRVAERNRRFYKRYPGDVDKVKAILRHVRDRDVELPAGGVLTPGRFLQLGLA 612
            MDGPE QAKFL NFRADSIV+DCE VR ELAG DAKWTVLGQSFGGFCLLTYLSK+PDSLSAGLFTGGLPPVGRTPDE VYRATYRRVAERNRRFYKRYPGDVDKVKAILRHVR RDVELP GGVLTPGRFLQLGLA
Sbjct:    1 MDGPEEQAKFLENFRADSIVDDCEVVRRELAGRDAKWTVLGQSFGGFCLLTYLSKHPDSLSAGLFTGGLPPVGRTPDEAVYRATYRRVAERNRRFYKRYPGDVDKVKAILRHVRARDVELPGGGVLTPGRFLQLGLA 137          
BLAST of mRNA_Ecto-sp13_S_contig14627.3552.1 vs. uniprot
Match: A0A2D6HHS1_9BACT (Alpha/beta hydrolase n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D6HHS1_9BACT)

HSP 1 Score: 246 bits (628), Expect = 4.990e-77
Identity = 120/203 (59.11%), Postives = 149/203 (73.40%), Query Frame = 1
Query:    1 RELVLTKHVGDKDRPFLLFLQGGPGFPAPRVSRPEGWWGRALKEFRVIMLDQRGTGRSSPVTHRTLAEMDGPETQAKFLGNFRADSIVEDCEAVRGELAGGDAKWTVLGQSFGGFCLLTYLSKYPDSLSAGLFTGGLPPVGRTPDEVYRATYRRVAERNRRFYKRYPGDVDKVKAILRHVRDRDVELPAGGVLTPGRFLQLGL 609
            RE+V  +    +DRP+L+FLQGGPGF +PR     GW GRA+ E+RV++LDQRGTGRSS    ++LA  D P  QA++L +FRADSIV D E +R EL GGD +W+VLGQSFGGFC + YLS +P+SL     TGGLP + R  ++VYRATY RV ERNRR+Y+RYP DVD+V+ IL H+  RDV LP GG LTP RF QLGL
Sbjct:   37 REIV-ARGGAVEDRPWLVFLQGGPGFESPRPPSRGGWIGRAVAEYRVLLLDQRGTGRSSRACTQSLARFDSPGDQAEYLTHFRADSIVRDAELLRRELLGGDGRWSVLGQSFGGFCAVHYLSTFPESLREVYITGGLPSLSRPAEDVYRATYPRVLERNRRYYERYPADVDRVRRILEHLEARDVHLPGGGSLTPRRFQQLGL 238          
BLAST of mRNA_Ecto-sp13_S_contig14627.3552.1 vs. uniprot
Match: A0A7S1K3Y7_9ALVE (Hypothetical protein (Fragment) n=1 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A7S1K3Y7_9ALVE)

HSP 1 Score: 236 bits (603), Expect = 1.460e-74
Identity = 115/204 (56.37%), Postives = 153/204 (75.00%), Query Frame = 1
Query:    1 RELVLTKHVGDKDRPFLLFLQGGPGFPAPR-VSRPEGWWGRALKEFRVIMLDQRGTGRSSPVTHRTLAEMDGPETQAKFLGNFRADSIVEDCEAVRGELAGGDAKWTVLGQSFGGFCLLTYLSKYPDSLSAGLFTGGLPPVGRTPDEVYRATYRRVAERNRRFYKRYPGDVDKVKAILRHVRDRDVELPAGGVLTPGRFLQLGL 609
            RE+V T      ++P LL+L+GGPGFPAPR VS+  GW  R+L+E+RV +LD+RGTG S+PVTH TL+    P+ QA +L +FRADSI+ DCE +R  L   + +WTVLGQS+GGF ++ YLS+ P +L A + TGGLPP+ R+ +EVYRAT+RRV ERNRRFY+RYPGDV +V+ I+RH+      LP+GG+LT  RFLQLG+
Sbjct:   84 REVVSTGRERS-NQPALLYLEGGPGFPAPRPVSKSVGWLHRSLEEYRVYLLDERGTGNSTPVTHETLSHFPSPQQQAAYLMHFRADSIIRDCERIRSILLNQE-RWTVLGQSYGGFLIMRYLSEAPHALEAAIITGGLPPLQRSAEEVYRATFRRVMERNRRFYERYPGDVKRVQDIVRHLHYNPTPLPSGGLLTARRFLQLGM 285          
BLAST of mRNA_Ecto-sp13_S_contig14627.3552.1 vs. uniprot
Match: UPI0019BFE1FF (Alpha/beta fold hydrolase n=1 Tax=Leptolyngbya sp. TaxID=47254 RepID=UPI0019BFE1FF)

HSP 1 Score: 237 bits (604), Expect = 1.050e-73
Identity = 113/205 (55.12%), Postives = 151/205 (73.66%), Query Frame = 1
Query:    1 RELVL--TKHVGDKDRPFLLFLQGGPGFPAPRVSRPEGWWGRALKEFRVIMLDQRGTGRSSPVTHRTLAEMDGPETQAKFLGNFRADSIVEDCEAVRGELAGGDAKWTVLGQSFGGFCLLTYLSKYPDSLSAGLFTGGLPPVGRTPDEVYRATYRRVAERNRRFYKRYPGDVDKVKAILRHVRDRDVELPAGGVLTPGRFLQLGL 609
            RE+V    K  G  + P+LLFLQGGPGFP+PR     GW  RAL+++RV++LDQRGTG S+PVT  TL  +   + Q ++L NFRAD+IV D EA+R ELAGG AKWT+LGQS+GGFC+ TYLS +P++L   ++TGGLPP+   PDEVYRATY+R  E+N+ FY+RYP D   V+ ++ ++ + +V LP G +LTP RFLQ+GL
Sbjct:   52 REVVSLENKDKGKAELPWLLFLQGGPGFPSPRPESNSGWLKRALQKYRVLLLDQRGTGLSTPVTIDTLPMISDAQKQFEYLQNFRADNIVRDSEAIRKELAGG-AKWTLLGQSYGGFCITTYLSLFPEALDGAIYTGGLPPLVDQPDEVYRATYKRAIEKNQEFYQRYPADAKLVEKVVSYLANNEVRLPCGEILTPRRFLQIGL 255          
BLAST of mRNA_Ecto-sp13_S_contig14627.3552.1 vs. uniprot
Match: A0A535ILM1_9CHLR (Alpha/beta hydrolase (Fragment) n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A535ILM1_9CHLR)

HSP 1 Score: 230 bits (587), Expect = 2.840e-72
Identity = 109/203 (53.69%), Postives = 146/203 (71.92%), Query Frame = 1
Query:    1 RELVLTKHVGDKDRPFLLFLQGGPGFPAPRVSRPEGWWGRALKEFRVIMLDQRGTGRSSPVTHRTLAEMDGPETQAKFLGNFRADSIVEDCEAVRGELAGGDAKWTVLGQSFGGFCLLTYLSKYPDSLSAGLFTGGLPPVGRTPDEVYRATYRRVAERNRRFYKRYPGDVDKVKAILRHVRDRDVELPAGGVLTPGRFLQLGL 609
            RE+V     GDK  P+L+F QGGPG  APR    +GW  RAL+++RV++LDQRGTGRS+PVT +TLA  + P+  A +L +FRAD+IV D E +R +L G   +W+VLGQSFGGFC+ +YLS  P  L   L TGGLPP+ R  D+VYRATYRRV ERNR +Y+RYP DV++ +A+ R++ + +V+LP G  L+  RF QLG+
Sbjct:   36 REVVSPARAGDK-LPWLVFFQGGPGAAAPRPMGKDGWLKRALQDYRVLLLDQRGTGRSTPVTAQTLARFESPQAMADYLKHFRADAIVRDAEHIRRQLLGEQERWSVLGQSFGGFCVTSYLSLAPQGLREALITGGLPPLERPVDDVYRATYRRVLERNRLYYERYPDDVERARAVARYLSEHEVDLPGGDRLSARRFQQLGM 237          
BLAST of mRNA_Ecto-sp13_S_contig14627.3552.1 vs. uniprot
Match: A0A8J6CBV9_DIALT (AB hydrolase-1 domain-containing protein n=3 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CBV9_DIALT)

HSP 1 Score: 236 bits (601), Expect = 4.140e-72
Identity = 121/205 (59.02%), Postives = 143/205 (69.76%), Query Frame = 1
Query:    1 RELVLTKH-VGDKDRPFLLFLQGGPGFPAPRVSRPE-GWWGRALKEFRVIMLDQRGTGRSSPVTHRTLAEMDGPETQAKFLGNFRADSIVEDCEAVRGELAGGDAKWTVLGQSFGGFCLLTYLSKYPDSLSAGLFTGGLPPVGRTPDEVYRATYRRVAERNRRFYKRYPGDVDKVKAILRHVRDRDVELPAGGVLTPGRFLQLGL 609
            RELVL KH  G    P+LL+LQGGPGFPAPR   P  GW   AL  +RV++LDQRG GRS+PVT  TL      E QA++L   RADSIV DCEAVR  L G   K T+LGQS+GGFC+LTYLS +P SL   L T GL PVG++ + VYR+T+ R+ ERNRRFY+RYP D  KV+AI R +RD    LP+GG LT  RFLQLGL
Sbjct:   72 RELVLAKHGAGGAQLPYLLYLQGGPGFPAPRPGAPPTGWLKSALDTYRVLLLDQRGVGRSTPVTAETLVTRGDAEAQARYLTCLRADSIVRDCEAVRVALGGDACKLTLLGQSYGGFCILTYLSLFPASLERALLTCGLAPVGQSAEAVYRSTFERMRERNRRFYQRYPQDAPKVRAIARALRDAPAPLPSGGTLTVRRFLQLGL 276          
BLAST of mRNA_Ecto-sp13_S_contig14627.3552.1 vs. uniprot
Match: UPI001EE388F1 (alpha/beta hydrolase n=1 Tax=Casimicrobium huifangae TaxID=2591109 RepID=UPI001EE388F1)

HSP 1 Score: 233 bits (595), Expect = 4.890e-72
Identity = 113/204 (55.39%), Postives = 150/204 (73.53%), Query Frame = 1
Query:    1 RELVLTKHVGDKDRPFLLFLQGGPGFPAPRVSRPEGWWGRALKEFRVIMLDQRGTGRSSPVTHRTLAEMDGPETQAKFLGNFRADSIVEDCEAVRGELAGGDAKWTVLGQSFGGFCLLTYLSKYPDSLSAGLFTGGLPPVGRTPDEVYRATYRRVAERNRRFYKRYPGDVDKVKAILRHVRDRDVELPAGGVLTPGRFLQLGLA 612
            RELV   +  + D P+L+F QGGPGF +PR + P GW  RAL+EFRV++LDQRGTG S+PVT +TL        QA +L +FRAD+IV D EA+R +L  GD +WTVLGQSFGGFC + YLS  P++L+  L TGG+PP+ R  D++YRATY+RV  +NR +Y+RYPGDV +V+ IL+++   D+ L +GG LTP RFLQLG+A
Sbjct:   37 RELVAPGNA-NADLPYLIFFQGGPGFGSPRPTGPGGWIKRALQEFRVLLLDQRGTGLSTPVTAQTLRHRGDAAAQADYLQHFRADNIVRDAEAIRRQLI-GDKRWTVLGQSFGGFCAMHYLSAVPEALTEVLITGGIPPLARPTDDIYRATYQRVIAKNRCYYERYPGDVARVREILKYLNGHDIALASGGRLTPERFLQLGIA 238          
BLAST of mRNA_Ecto-sp13_S_contig14627.3552.1 vs. uniprot
Match: A0A7S1HGJ8_HEMAN (Hypothetical protein n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1HGJ8_HEMAN)

HSP 1 Score: 237 bits (605), Expect = 6.830e-72
Identity = 122/212 (57.55%), Postives = 146/212 (68.87%), Query Frame = 1
Query:    1 RELVLTKHV-----GDKDRPFLLFLQGGPGFPAPRVSRPEGWW-GRALKEFRVIMLDQRGTGRSSPVTHRTLAEMDGPETQAKFLGNFRADSIVEDCEAVRGELAGGDAKWTVLGQSFGGFCLLTYLSKYPDSLSAGLFTGGLPPV--GRTPDEVYRATYRRVAERNRRFYKRYPGDVDKVKAILRHVRDRDVELPAGGVLTPGRFLQLGLA 612
            RELV  +H      G    P LLFLQGGPGFPA R   P G W  RAL+++RV++LDQRGTGRSSPVTH TLA  +  + QA  L +FRADSIV+DCE +R E  G   KWTVLGQSFGGFC+ TYLS  P+ L+A L TGGLPP+  G T D+VY ATY R+A R +RFY+RYP  +D V+ I+ ++      LP GG LT  RFLQLGLA
Sbjct:  175 RELVSAQHAAAMKNGGHAPPTLLFLQGGPGFPAGRPQSPNGGWIQRALQDYRVVLLDQRGTGRSSPVTHETLAREENAQRQADMLSHFRADSIVKDCEKIREEFLGKKQKWTVLGQSFGGFCVCTYLSMAPEGLAAALLTGGLPPIDDGCTADKVYDATYERMAVRTQRFYERYPQHIDTVRDIVSYLDKNPTPLPGGGTLTARRFLQLGLA 386          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14627.3552.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJZ2_ECTSI2.950e-13996.57Proline iminopeptidase n=1 Tax=Ectocarpus siliculo... [more]
A0A835ZBB4_9STRA9.370e-8561.03Proline iminopeptidase n=1 Tax=Tribonema minus Tax... [more]
A0A6H5K0A7_9PHAE3.570e-8192.70AB hydrolase-1 domain-containing protein n=1 Tax=E... [more]
A0A2D6HHS1_9BACT4.990e-7759.11Alpha/beta hydrolase n=1 Tax=Planctomycetes bacter... [more]
A0A7S1K3Y7_9ALVE1.460e-7456.37Hypothetical protein (Fragment) n=1 Tax=Vitrella b... [more]
UPI0019BFE1FF1.050e-7355.12Alpha/beta fold hydrolase n=1 Tax=Leptolyngbya sp.... [more]
A0A535ILM1_9CHLR2.840e-7253.69Alpha/beta hydrolase (Fragment) n=1 Tax=Chloroflex... [more]
A0A8J6CBV9_DIALT4.140e-7259.02AB hydrolase-1 domain-containing protein n=3 Tax=D... [more]
UPI001EE388F14.890e-7255.39alpha/beta hydrolase n=1 Tax=Casimicrobium huifang... [more]
A0A7S1HGJ8_HEMAN6.830e-7257.55Hypothetical protein n=2 Tax=Hemiselmis andersenii... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14627contigEcto-sp13_S_contig14627:2..4014 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score407.5
Seed ortholog evalue3.6e-111
Seed eggNOG ortholog2880.D7FJZ2
Model size612
KEGG koko:K01259
KEGG ReactionR00135
KEGG Pathwayko00330,map00330
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464
Exons6
EggNOG free text desc.alpha/beta hydrolase fold
EggNOG OGs2QSNW@2759,COG0596@1
EC3.4.11.5
Cds size612
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01002
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14627.3552.1prot_Ecto-sp13_S_contig14627.3552.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig14627 2..4014 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462781.325711-CDS-Ecto-sp13_S_contig14627:1..971681462781.325711-CDS-Ecto-sp13_S_contig14627:1..97Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14627 2..97 -
1681462781.3482287-CDS-Ecto-sp13_S_contig14627:763..8411681462781.3482287-CDS-Ecto-sp13_S_contig14627:763..841Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14627 764..841 -
1681462781.3575861-CDS-Ecto-sp13_S_contig14627:1433..15921681462781.3575861-CDS-Ecto-sp13_S_contig14627:1433..1592Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14627 1434..1592 -
1681462781.3676772-CDS-Ecto-sp13_S_contig14627:2366..24411681462781.3676772-CDS-Ecto-sp13_S_contig14627:2366..2441Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14627 2367..2441 -
1681462781.3781202-CDS-Ecto-sp13_S_contig14627:3042..31831681462781.3781202-CDS-Ecto-sp13_S_contig14627:3042..3183Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14627 3043..3183 -
1681462781.391853-CDS-Ecto-sp13_S_contig14627:3951..40141681462781.391853-CDS-Ecto-sp13_S_contig14627:3951..4014Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14627 3952..4014 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig14627.3552.1

>prot_Ecto-sp13_S_contig14627.3552.1 ID=prot_Ecto-sp13_S_contig14627.3552.1|Name=mRNA_Ecto-sp13_S_contig14627.3552.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=204bp
RELVLTKHVGDKDRPFLLFLQGGPGFPAPRVSRPEGWWGRALKEFRVIML
DQRGTGRSSPVTHRTLAEMDGPETQAKFLGNFRADSIVEDCEAVRGELAG
GDAKWTVLGQSFGGFCLLTYLSKYPDSLSAGLFTGGLPPVGRTPDEVYRA
TYRRVAERNRRFYKRYPGDVDKVKAILRHVRDRDVELPAGGVLTPGRFLQ
LGLA
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mRNA from alignment at Ecto-sp13_S_contig14627:2..4014-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig14627.3552.1 ID=mRNA_Ecto-sp13_S_contig14627.3552.1|Name=mRNA_Ecto-sp13_S_contig14627.3552.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4013bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14627:2..4014- (Ectocarpus species13 EcNAP12_S_4_19m)
AGGGAGCTTGTGCTTACCAAGCACGTGGGCGACAAGGATCGACCTTTTCT CCTTTTCTTGCAGGTGCGTGCCTATGTACAGTAGTGCTACAAGCAGCGCT GTATTGCTGCGCTGCGCGTTTTGGAACAGTGGCTGCACTCCGTCAAAGCC TCTCTTAGGTGAGGTTTCTCGGGAAGGGGGGGGCGTTTTTTTCTTCGAGG GAAAGGAGGCGGCGCGGTCACCGAGTATGTAGGCGAGGAGAATGAACTAT TTTATGTTTCCACTAGTATTGGAGAGAGTAGTTAGCTTGGTGGGAATATT TGATTTTTAGTCGGGTAGGTTGATCGGCATTTCGCGGGCCGCACACGTCA CGAGAGCTCAAGGAGAAGCTCGGCCACAAAGCTGGAAAAATGAAAATTTA CCCCACACGAGAGAATATGCATTAAAACATGTAAGGATTATGTGTGTCCG CTATGTCGAAATATTAAGCAGAAGTTTGGTTCAACAGTAGTTTCGTGGAG ACAGACAGAGCGCCCGGATGTCGGCGACGTCCTACGTCCGAACTACGGCA TATTCATAGCGCCTACCGACGATGCTCAGTGTCGAGAGGGGTGCATGGTC CTATGGTCAGAGGACAGAGAACACCCCGCCCGTGAACAAAATGTACAACT TCGTACCCGTGCTTCCTAAGCAACGCTTTGTCCACAACCAGCTCCCCCCA ATGCTCCGTCCTCTCGTGGACGAGTGGTCAATGGTCTTACCGGTAAGGCA TGAAAAACATAAGAGTACGCCCCCCCCCCCTCCTCGCCTTGATATTTCTA TGTTGTACTCCTACCCCCCCCCCCCAACCAGGGGGGGCCGGGGTTTCCGG CCCCCAGGGTGTCCCGTCCGGAGGGGTGGTGGGGCCGCGCCCTGAAGGAG TTCCGAGTGATAATGCTGGACCAGCGAGGGACGGGGCGGAGTAGCCCCGT AACTCACAGAACGCTCGCGGAGGTGGGTGGTTTGGTGGGGGTGGGGGGGG GTGAACGAAGTATGTTACAGGGGTTAGCAACAGGCTCATGTGCACCCAAA GAAGGTAGAAGTAGCAGTCGTTGCCAAGCCGGAATGTCACGTGCGTACAT CCCGATATGATGTACCCGGGGAGAACCGGAATGACCCGTCCGGGAAACTG GAATGCCCCGTACATCAAAACTGGAACGCTACTTGTTGCTCAAACTGGAG CATCACTGCGTCCATGTTGTGGAATGCTGGCATGCAAGAAAGGCGTTGCG TGCCATGTCCGAACCCGAAAAAATCCTCTCGTCCAGAGTAGTGGGGGTGA AAACGGAACCCAATGTTGCCGGGCTTGGAAAGGGATGGGTACTGACTACG ATGCACACTGCCCTTACGATGAGACCAATGGACACCAATTTTGGTCCGCG CCTATACCGCAACGCACATCGCTCGCTCTTTGTGTTGGTACTACATCATT GTTTTTTTCGTTGTTGGCCTTGTTGGCGATCGCCTATCTAAAAGCTCTTG AATTTATTGCTGCTGCCGCCGCCGCCGCCGCCGCTGCTGCTGCTGCTGCT GCTGCTACTGCCACTATCGACAGATGGACGGCCCCGAGACGCAGGCGAAA TTTCTGGGAAATTTCCGCGCGGACTCCATCGTCGAAGACTGCGAAGCGGT AAACAAGAGGCAGGCGTCCAAATGCAGCATTACTCCTCCTTTCGGTCGTT GTGTGGACATAATCGACTATTTTAATCACGTTACAGTAATGGTTGAACCA AATGTTGGATAGGGCCTTAGTGGGGAAGAACGTCATGCCGCAGACTTTGT GGGAAGAGGTTCACGGAAATTGGGCGCAAGCCCCCGTGATTTCGGCGGGA CGGATGCCTGGTGGGTGGTTGCACGGGACGATTGAATCAAAGACCAATCA ATGCACACCTCCTTCAACAGCAGCTCAGAGAAAAAAAAACGTTGCGTGAC GTTAGAAGTTACTGAGCAGAGACCGGAACGGGTCATAGTGTTTGTAGACA GCAAAAAAACACGCAACTTGTGCTGGCCTTCGGCGGGTTGTGTTTGTTGC AGGCGAGGCGAGTGTGAGCCTTTCCGGCAACCACCACGTGACAAGTAACT TTACGAAACGCGTGTTTTTCTTGACCAATGCAAACGTGGAACAAACGTGG TACGATTTTTTTAATCGTAGGTTTGGACGGGGTAAGGCGCGAGTCAGCCA TAGGCTCTTTGCAACCGAACGTCGACACGATGGTGGCTTGTAACTACCAA ACCACGACGCCAACCATTCGCAAGCGCAAGACATCCAAACGTTGAACCAC GGTCTTAATCGATACTAGTTGCGGGGCTACGTAAAACCGCACTCGTACGT ACGGTGAATGAAAACAACGAAGTACACACAAACTGAATATATTGGAACCG CGGCACCGTCGAGTGTGCGCAGGTGCGGGGTGAGCTAGCCGGGGGGGACG CAAAGTGGACCGTGTTGGGGCAGTCCTTCGGGGGCTTCTGCCTGCTCACG TACCTCTCCAAGTACCCGGACTCGCTGAGCGCCGGTCTCTTTACCGGGGG GCTTCCTCCCGTCGGAAGGACGCCTGACGAGGTACTGTAAGCTCAATCAG AAAAACTGTGTTCTTTTGACACGTCAGGTAGACGGTGTGTACTGGAATTC CTGAGGGACGCTTGAAGCGTCTGTTTTCTCTTTCCGTTGCTGTGATGGGT TGGCGAGGGCAGGAACAAGCGCATTTGCTGCAATGCTCAAGTTTTTTTTG TGTAGGTTTGCGCTGTCGGGTTGCTTGCTCGCTGTAGAACTCGCGCCTAA CGAGGTGAGCACAGGAGAAAAAACGGGTTCTGTGTTCCAACACTTGGCAA GCGGTACGTATATGCGCACGTAGCGTTATGCGCACGTGGCATTGCTCTCC CAACCCACGCTTCATGCGCTTCAAGAGTAACAAGGGCCCGAACCTCCAAG AATGGCATGCGATGACCATGTTGCATTTTCTCTTGCTTGGGAAGCTGCAT CGTTTTACCTTTTTTTCCCGACAACACCGACATCGCTTCACAACATGCTT TTGTGTAGAGTGTCGTCGCTTTTGTTTTCTATGCTTGTCTTCCAGCAAAA CCAACAACCATTGTATACTCAAAGTAGGTAATTCCATTAACATTAATTTT TTTTTTTTGTTGCTCGGCCACAGGTGTACCGAGCCACCTACCGCAGGGTG GCGGAGAGAAATAGGCGTTTCTACAAGCGGTACCCAGGGGACGTGGACAA GGTGAGGCAGGCGCGAGTGAGCCAGCCCACCGCCGATCGGACGGGCGCGC CACGGCAATCTCGGCCTCCCGATCGATTCCCGAACGGGGTTGTTTAATTT GTCCGACCACCCACGAGTAGCAACAGTAGCAGCTCCAGCCTCTTCAAGGC TTGGTAATCACAAGCCGCGACCTTGAGTCAAGCCGTGCTGGTGGAAGGGG GGTCCACCCTGCGGGGGCCCACACCCAAGGAGTACCTTGTTGTTCGTTGT TCGTTGTTTATTGTTCGTTGTAGCCTGGCACCAATACCACGGAATCCCGT CATCCTGTCACTCGCTGGCGGGATCGATCTCTGCGGATTTTTGTTTTGTT GGTGCAGGGTAGTCGGTGGAGGTCACGGTGAGGTTCTAACGATGACAAGG ACACAGCAGCAGCAGCAGCAGCACTAGCAGCAGAAGCTACTACGATAACA ACAACAACAACAACAGCCCCATCAACGACCCCAACAACGACAATCCACGA CAGCCATGACAGCAACATCTATGGCGTCAACGTTCCTTCGACCCTTGTGC CAACAACAAGACCACCACCAACACCACCGCCGTCATCAACAACAACAATA AGAACAACAAGAGCGACAACACCAACAACACCAACACCAACAACAACCTA CGTACCCCGGAAATCAGGTGAAGGCCATCCTCAGGCACGTGCGCGACCGA GACGTCGAACTCCCCGCCGGAGGCGTCTTGACGCCGGGGAGGTTCCTGCA GCTGGGCTTGGCC
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig14627:2..4014-

>mRNA_Ecto-sp13_S_contig14627.3552.1 ID=mRNA_Ecto-sp13_S_contig14627.3552.1|Name=mRNA_Ecto-sp13_S_contig14627.3552.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=612bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14627:2..4014- (Ectocarpus species13 EcNAP12_S_4_19m)
AGGGAGCTTGTGCTTACCAAGCACGTGGGCGACAAGGATCGACCTTTTCT
CCTTTTCTTGCAGGGGGGGCCGGGGTTTCCGGCCCCCAGGGTGTCCCGTC
CGGAGGGGTGGTGGGGCCGCGCCCTGAAGGAGTTCCGAGTGATAATGCTG
GACCAGCGAGGGACGGGGCGGAGTAGCCCCGTAACTCACAGAACGCTCGC
GGAGATGGACGGCCCCGAGACGCAGGCGAAATTTCTGGGAAATTTCCGCG
CGGACTCCATCGTCGAAGACTGCGAAGCGGTGCGGGGTGAGCTAGCCGGG
GGGGACGCAAAGTGGACCGTGTTGGGGCAGTCCTTCGGGGGCTTCTGCCT
GCTCACGTACCTCTCCAAGTACCCGGACTCGCTGAGCGCCGGTCTCTTTA
CCGGGGGGCTTCCTCCCGTCGGAAGGACGCCTGACGAGGTGTACCGAGCC
ACCTACCGCAGGGTGGCGGAGAGAAATAGGCGTTTCTACAAGCGGTACCC
AGGGGACGTGGACAAGGTGAAGGCCATCCTCAGGCACGTGCGCGACCGAG
ACGTCGAACTCCCCGCCGGAGGCGTCTTGACGCCGGGGAGGTTCCTGCAG
CTGGGCTTGGCC
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