mRNA_Ecto-sp13_S_contig14627.3552.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig14627.3552.1 vs. uniprot
Match: D7FJZ2_ECTSI (Proline iminopeptidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJZ2_ECTSI) HSP 1 Score: 409 bits (1051), Expect = 2.950e-139 Identity = 197/204 (96.57%), Postives = 199/204 (97.55%), Query Frame = 1
Query: 1 RELVLTKHVGDKDRPFLLFLQGGPGFPAPRVSRPEGWWGRALKEFRVIMLDQRGTGRSSPVTHRTLAEMDGPETQAKFLGNFRADSIVEDCEAVRGELAGGDAKWTVLGQSFGGFCLLTYLSKYPDSLSAGLFTGGLPPVGRTPDEVYRATYRRVAERNRRFYKRYPGDVDKVKAILRHVRDRDVELPAGGVLTPGRFLQLGLA 612
RELVLTKHVGDKDRPFLLFLQGGPGFPAPRVSRPEGWWGRALKEFRVIMLDQRGTGRSSPVTH+TLAEMDGPETQAKFL NFRADSIVEDCEAVR ELAGGDAKWTVLGQSFGGFCLLTYLSK+P SLSAGLFTGGLPPVGRTPDEVYRATYRRVAERN RFYKRYPGDVDKVK ILRHVRDRDVELPAGGVLTPGRFLQLGLA
Sbjct: 147 RELVLTKHVGDKDRPFLLFLQGGPGFPAPRVSRPEGWWGRALKEFRVIMLDQRGTGRSSPVTHKTLAEMDGPETQAKFLENFRADSIVEDCEAVRRELAGGDAKWTVLGQSFGGFCLLTYLSKHPGSLSAGLFTGGLPPVGRTPDEVYRATYRRVAERNSRFYKRYPGDVDKVKTILRHVRDRDVELPAGGVLTPGRFLQLGLA 350
BLAST of mRNA_Ecto-sp13_S_contig14627.3552.1 vs. uniprot
Match: A0A835ZBB4_9STRA (Proline iminopeptidase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBB4_9STRA) HSP 1 Score: 267 bits (682), Expect = 9.370e-85 Identity = 130/213 (61.03%), Postives = 164/213 (77.00%), Query Frame = 1
Query: 1 RELVLTKHVGDKDRPFLLFLQGGPGFPAPRVSRPEGWWGRALKEFRVIMLDQRGTGRSSPVTHRTLAEMDGPETQAKFLGNFRADSIVEDCEAVRGELAG-------GDAKWTVLGQSFGGFCLLTYLSKYPDSLSAGLFTGGLPPVGRTPDEVYRATYRRVAERNRRFYKRYPGDVDKVKAILRHVRDRD---VELPAGGVLTPGRFLQLGL 609
RELVL ++ D++ P +FLQGGPGFP+PR P GW GRALK+FRV++LDQRGTG+S+PVT +A M+ PE QA++LG+FR+D+IV DCEA+R L KWTVLGQS+GGFCL TYLS++PD++ AGLFTGGLPP+ R DE+YRATYRR AERNRR+Y RYPGDV KVK+IL+ + ++ + LP GG+LTP RFLQLGL
Sbjct: 46 RELVLGRNAKDQNLPMCIFLQGGPGFPSPRTMGPGGWVGRALKDFRVLLLDQRGTGKSTPVTAAGMALMESPEAQAEYLGHFRSDNIVSDCEAIRKMLLADPNDSEAAPKKWTVLGQSYGGFCLATYLSRHPDAIEAGLFTGGLPPL-RDVDEIYRATYRRCAERNRRYYARYPGDVSKVKSILQFLAEQPRGGMPLPGGGLLTPRRFLQLGL 257
BLAST of mRNA_Ecto-sp13_S_contig14627.3552.1 vs. uniprot
Match: A0A6H5K0A7_9PHAE (AB hydrolase-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0A7_9PHAE) HSP 1 Score: 254 bits (649), Expect = 3.570e-81 Identity = 127/137 (92.70%), Postives = 129/137 (94.16%), Query Frame = 1
Query: 205 MDGPETQAKFLGNFRADSIVEDCEAVRGELAGGDAKWTVLGQSFGGFCLLTYLSKYPDSLSAGLFTGGLPPVGRTPDE-VYRATYRRVAERNRRFYKRYPGDVDKVKAILRHVRDRDVELPAGGVLTPGRFLQLGLA 612
MDGPE QAKFL NFRADSIV+DCE VR ELAG DAKWTVLGQSFGGFCLLTYLSK+PDSLSAGLFTGGLPPVGRTPDE VYRATYRRVAERNRRFYKRYPGDVDKVKAILRHVR RDVELP GGVLTPGRFLQLGLA
Sbjct: 1 MDGPEEQAKFLENFRADSIVDDCEVVRRELAGRDAKWTVLGQSFGGFCLLTYLSKHPDSLSAGLFTGGLPPVGRTPDEAVYRATYRRVAERNRRFYKRYPGDVDKVKAILRHVRARDVELPGGGVLTPGRFLQLGLA 137
BLAST of mRNA_Ecto-sp13_S_contig14627.3552.1 vs. uniprot
Match: A0A2D6HHS1_9BACT (Alpha/beta hydrolase n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D6HHS1_9BACT) HSP 1 Score: 246 bits (628), Expect = 4.990e-77 Identity = 120/203 (59.11%), Postives = 149/203 (73.40%), Query Frame = 1
Query: 1 RELVLTKHVGDKDRPFLLFLQGGPGFPAPRVSRPEGWWGRALKEFRVIMLDQRGTGRSSPVTHRTLAEMDGPETQAKFLGNFRADSIVEDCEAVRGELAGGDAKWTVLGQSFGGFCLLTYLSKYPDSLSAGLFTGGLPPVGRTPDEVYRATYRRVAERNRRFYKRYPGDVDKVKAILRHVRDRDVELPAGGVLTPGRFLQLGL 609
RE+V + +DRP+L+FLQGGPGF +PR GW GRA+ E+RV++LDQRGTGRSS ++LA D P QA++L +FRADSIV D E +R EL GGD +W+VLGQSFGGFC + YLS +P+SL TGGLP + R ++VYRATY RV ERNRR+Y+RYP DVD+V+ IL H+ RDV LP GG LTP RF QLGL
Sbjct: 37 REIV-ARGGAVEDRPWLVFLQGGPGFESPRPPSRGGWIGRAVAEYRVLLLDQRGTGRSSRACTQSLARFDSPGDQAEYLTHFRADSIVRDAELLRRELLGGDGRWSVLGQSFGGFCAVHYLSTFPESLREVYITGGLPSLSRPAEDVYRATYPRVLERNRRYYERYPADVDRVRRILEHLEARDVHLPGGGSLTPRRFQQLGL 238
BLAST of mRNA_Ecto-sp13_S_contig14627.3552.1 vs. uniprot
Match: A0A7S1K3Y7_9ALVE (Hypothetical protein (Fragment) n=1 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A7S1K3Y7_9ALVE) HSP 1 Score: 236 bits (603), Expect = 1.460e-74 Identity = 115/204 (56.37%), Postives = 153/204 (75.00%), Query Frame = 1
Query: 1 RELVLTKHVGDKDRPFLLFLQGGPGFPAPR-VSRPEGWWGRALKEFRVIMLDQRGTGRSSPVTHRTLAEMDGPETQAKFLGNFRADSIVEDCEAVRGELAGGDAKWTVLGQSFGGFCLLTYLSKYPDSLSAGLFTGGLPPVGRTPDEVYRATYRRVAERNRRFYKRYPGDVDKVKAILRHVRDRDVELPAGGVLTPGRFLQLGL 609
RE+V T ++P LL+L+GGPGFPAPR VS+ GW R+L+E+RV +LD+RGTG S+PVTH TL+ P+ QA +L +FRADSI+ DCE +R L + +WTVLGQS+GGF ++ YLS+ P +L A + TGGLPP+ R+ +EVYRAT+RRV ERNRRFY+RYPGDV +V+ I+RH+ LP+GG+LT RFLQLG+
Sbjct: 84 REVVSTGRERS-NQPALLYLEGGPGFPAPRPVSKSVGWLHRSLEEYRVYLLDERGTGNSTPVTHETLSHFPSPQQQAAYLMHFRADSIIRDCERIRSILLNQE-RWTVLGQSYGGFLIMRYLSEAPHALEAAIITGGLPPLQRSAEEVYRATFRRVMERNRRFYERYPGDVKRVQDIVRHLHYNPTPLPSGGLLTARRFLQLGM 285
BLAST of mRNA_Ecto-sp13_S_contig14627.3552.1 vs. uniprot
Match: UPI0019BFE1FF (Alpha/beta fold hydrolase n=1 Tax=Leptolyngbya sp. TaxID=47254 RepID=UPI0019BFE1FF) HSP 1 Score: 237 bits (604), Expect = 1.050e-73 Identity = 113/205 (55.12%), Postives = 151/205 (73.66%), Query Frame = 1
Query: 1 RELVL--TKHVGDKDRPFLLFLQGGPGFPAPRVSRPEGWWGRALKEFRVIMLDQRGTGRSSPVTHRTLAEMDGPETQAKFLGNFRADSIVEDCEAVRGELAGGDAKWTVLGQSFGGFCLLTYLSKYPDSLSAGLFTGGLPPVGRTPDEVYRATYRRVAERNRRFYKRYPGDVDKVKAILRHVRDRDVELPAGGVLTPGRFLQLGL 609
RE+V K G + P+LLFLQGGPGFP+PR GW RAL+++RV++LDQRGTG S+PVT TL + + Q ++L NFRAD+IV D EA+R ELAGG AKWT+LGQS+GGFC+ TYLS +P++L ++TGGLPP+ PDEVYRATY+R E+N+ FY+RYP D V+ ++ ++ + +V LP G +LTP RFLQ+GL
Sbjct: 52 REVVSLENKDKGKAELPWLLFLQGGPGFPSPRPESNSGWLKRALQKYRVLLLDQRGTGLSTPVTIDTLPMISDAQKQFEYLQNFRADNIVRDSEAIRKELAGG-AKWTLLGQSYGGFCITTYLSLFPEALDGAIYTGGLPPLVDQPDEVYRATYKRAIEKNQEFYQRYPADAKLVEKVVSYLANNEVRLPCGEILTPRRFLQIGL 255
BLAST of mRNA_Ecto-sp13_S_contig14627.3552.1 vs. uniprot
Match: A0A535ILM1_9CHLR (Alpha/beta hydrolase (Fragment) n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A535ILM1_9CHLR) HSP 1 Score: 230 bits (587), Expect = 2.840e-72 Identity = 109/203 (53.69%), Postives = 146/203 (71.92%), Query Frame = 1
Query: 1 RELVLTKHVGDKDRPFLLFLQGGPGFPAPRVSRPEGWWGRALKEFRVIMLDQRGTGRSSPVTHRTLAEMDGPETQAKFLGNFRADSIVEDCEAVRGELAGGDAKWTVLGQSFGGFCLLTYLSKYPDSLSAGLFTGGLPPVGRTPDEVYRATYRRVAERNRRFYKRYPGDVDKVKAILRHVRDRDVELPAGGVLTPGRFLQLGL 609
RE+V GDK P+L+F QGGPG APR +GW RAL+++RV++LDQRGTGRS+PVT +TLA + P+ A +L +FRAD+IV D E +R +L G +W+VLGQSFGGFC+ +YLS P L L TGGLPP+ R D+VYRATYRRV ERNR +Y+RYP DV++ +A+ R++ + +V+LP G L+ RF QLG+
Sbjct: 36 REVVSPARAGDK-LPWLVFFQGGPGAAAPRPMGKDGWLKRALQDYRVLLLDQRGTGRSTPVTAQTLARFESPQAMADYLKHFRADAIVRDAEHIRRQLLGEQERWSVLGQSFGGFCVTSYLSLAPQGLREALITGGLPPLERPVDDVYRATYRRVLERNRLYYERYPDDVERARAVARYLSEHEVDLPGGDRLSARRFQQLGM 237
BLAST of mRNA_Ecto-sp13_S_contig14627.3552.1 vs. uniprot
Match: A0A8J6CBV9_DIALT (AB hydrolase-1 domain-containing protein n=3 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CBV9_DIALT) HSP 1 Score: 236 bits (601), Expect = 4.140e-72 Identity = 121/205 (59.02%), Postives = 143/205 (69.76%), Query Frame = 1
Query: 1 RELVLTKH-VGDKDRPFLLFLQGGPGFPAPRVSRPE-GWWGRALKEFRVIMLDQRGTGRSSPVTHRTLAEMDGPETQAKFLGNFRADSIVEDCEAVRGELAGGDAKWTVLGQSFGGFCLLTYLSKYPDSLSAGLFTGGLPPVGRTPDEVYRATYRRVAERNRRFYKRYPGDVDKVKAILRHVRDRDVELPAGGVLTPGRFLQLGL 609
RELVL KH G P+LL+LQGGPGFPAPR P GW AL +RV++LDQRG GRS+PVT TL E QA++L RADSIV DCEAVR L G K T+LGQS+GGFC+LTYLS +P SL L T GL PVG++ + VYR+T+ R+ ERNRRFY+RYP D KV+AI R +RD LP+GG LT RFLQLGL
Sbjct: 72 RELVLAKHGAGGAQLPYLLYLQGGPGFPAPRPGAPPTGWLKSALDTYRVLLLDQRGVGRSTPVTAETLVTRGDAEAQARYLTCLRADSIVRDCEAVRVALGGDACKLTLLGQSYGGFCILTYLSLFPASLERALLTCGLAPVGQSAEAVYRSTFERMRERNRRFYQRYPQDAPKVRAIARALRDAPAPLPSGGTLTVRRFLQLGL 276
BLAST of mRNA_Ecto-sp13_S_contig14627.3552.1 vs. uniprot
Match: UPI001EE388F1 (alpha/beta hydrolase n=1 Tax=Casimicrobium huifangae TaxID=2591109 RepID=UPI001EE388F1) HSP 1 Score: 233 bits (595), Expect = 4.890e-72 Identity = 113/204 (55.39%), Postives = 150/204 (73.53%), Query Frame = 1
Query: 1 RELVLTKHVGDKDRPFLLFLQGGPGFPAPRVSRPEGWWGRALKEFRVIMLDQRGTGRSSPVTHRTLAEMDGPETQAKFLGNFRADSIVEDCEAVRGELAGGDAKWTVLGQSFGGFCLLTYLSKYPDSLSAGLFTGGLPPVGRTPDEVYRATYRRVAERNRRFYKRYPGDVDKVKAILRHVRDRDVELPAGGVLTPGRFLQLGLA 612
RELV + + D P+L+F QGGPGF +PR + P GW RAL+EFRV++LDQRGTG S+PVT +TL QA +L +FRAD+IV D EA+R +L GD +WTVLGQSFGGFC + YLS P++L+ L TGG+PP+ R D++YRATY+RV +NR +Y+RYPGDV +V+ IL+++ D+ L +GG LTP RFLQLG+A
Sbjct: 37 RELVAPGNA-NADLPYLIFFQGGPGFGSPRPTGPGGWIKRALQEFRVLLLDQRGTGLSTPVTAQTLRHRGDAAAQADYLQHFRADNIVRDAEAIRRQLI-GDKRWTVLGQSFGGFCAMHYLSAVPEALTEVLITGGIPPLARPTDDIYRATYQRVIAKNRCYYERYPGDVARVREILKYLNGHDIALASGGRLTPERFLQLGIA 238
BLAST of mRNA_Ecto-sp13_S_contig14627.3552.1 vs. uniprot
Match: A0A7S1HGJ8_HEMAN (Hypothetical protein n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1HGJ8_HEMAN) HSP 1 Score: 237 bits (605), Expect = 6.830e-72 Identity = 122/212 (57.55%), Postives = 146/212 (68.87%), Query Frame = 1
Query: 1 RELVLTKHV-----GDKDRPFLLFLQGGPGFPAPRVSRPEGWW-GRALKEFRVIMLDQRGTGRSSPVTHRTLAEMDGPETQAKFLGNFRADSIVEDCEAVRGELAGGDAKWTVLGQSFGGFCLLTYLSKYPDSLSAGLFTGGLPPV--GRTPDEVYRATYRRVAERNRRFYKRYPGDVDKVKAILRHVRDRDVELPAGGVLTPGRFLQLGLA 612
RELV +H G P LLFLQGGPGFPA R P G W RAL+++RV++LDQRGTGRSSPVTH TLA + + QA L +FRADSIV+DCE +R E G KWTVLGQSFGGFC+ TYLS P+ L+A L TGGLPP+ G T D+VY ATY R+A R +RFY+RYP +D V+ I+ ++ LP GG LT RFLQLGLA
Sbjct: 175 RELVSAQHAAAMKNGGHAPPTLLFLQGGPGFPAGRPQSPNGGWIQRALQDYRVVLLDQRGTGRSSPVTHETLAREENAQRQADMLSHFRADSIVKDCEKIREEFLGKKQKWTVLGQSFGGFCVCTYLSMAPEGLAAALLTGGLPPIDDGCTADKVYDATYERMAVRTQRFYERYPQHIDTVRDIVSYLDKNPTPLPGGGTLTARRFLQLGLA 386 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14627.3552.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig14627.3552.1 >prot_Ecto-sp13_S_contig14627.3552.1 ID=prot_Ecto-sp13_S_contig14627.3552.1|Name=mRNA_Ecto-sp13_S_contig14627.3552.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=204bp RELVLTKHVGDKDRPFLLFLQGGPGFPAPRVSRPEGWWGRALKEFRVIMLback to top mRNA from alignment at Ecto-sp13_S_contig14627:2..4014- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig14627.3552.1 ID=mRNA_Ecto-sp13_S_contig14627.3552.1|Name=mRNA_Ecto-sp13_S_contig14627.3552.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4013bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14627:2..4014- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig14627:2..4014- >mRNA_Ecto-sp13_S_contig14627.3552.1 ID=mRNA_Ecto-sp13_S_contig14627.3552.1|Name=mRNA_Ecto-sp13_S_contig14627.3552.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=612bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14627:2..4014- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |