mRNA_Ecto-sp13_S_contig14616.3547.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig14616.3547.1 vs. uniprot
Match: D8LN33_ECTSI (Putative subunit of the Anaphase Promoting Complex n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN33_ECTSI) HSP 1 Score: 469 bits (1207), Expect = 2.330e-158 Identity = 233/245 (95.10%), Postives = 233/245 (95.10%), Query Frame = 1
Query: 1 AYAYLDNRPRAAVWLRTALEIDARCVEALQCLTRWHLLSIDEQASMVSGLEYGEMQQESWLHFLFKSQINRPPGSRAKVFGDLDRVGLGGNLDVLAAKAECCYEQARKKEPPPSPNDAQQALEICRQVFRTDPHNSACLPVYLAAMVELKMKSQLFYTAHQLVEAGPKQAVSWFAVACYYHLLDKNELAQRYFLKSTKLDGRFAPAWIGFGNAFAAQEETDQAVSAYRTAARLFQGSHLALLYIG 735
AYAYLDNRPRAAVWLRTALEIDARCVEALQCLTRWHLLSIDEQASMVSGLEYGE QQESWLHFLFKSQINRPPGSRAKVFGDL RVGLGGNLDVLAAKAECCYEQ NDAQQALEICRQVFRTDPHNSACLPVYLAAMVELKMKSQLFYTAHQLVEAGPKQAVSWFAVACYYHLLDKNELAQRYFLKSTKLDGRFAPAWIGFGNAFAAQEETDQAVSAYRTAARLFQGSHLALLYIG
Sbjct: 295 AYAYLDNRPRAAVWLRTALEIDARCVEALQCLTRWHLLSIDEQASMVSGLEYGEEQQESWLHFLFKSQINRPPGSRAKVFGDLGRVGLGGNLDVLAAKAECCYEQ----------NDAQQALEICRQVFRTDPHNSACLPVYLAAMVELKMKSQLFYTAHQLVEAGPKQAVSWFAVACYYHLLDKNELAQRYFLKSTKLDGRFAPAWIGFGNAFAAQEETDQAVSAYRTAARLFQGSHLALLYIG 529
BLAST of mRNA_Ecto-sp13_S_contig14616.3547.1 vs. uniprot
Match: A0A6H5JPV4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPV4_9PHAE) HSP 1 Score: 466 bits (1198), Expect = 5.510e-158 Identity = 230/245 (93.88%), Postives = 233/245 (95.10%), Query Frame = 1
Query: 1 AYAYLDNRPRAAVWLRTALEIDARCVEALQCLTRWHLLSIDEQASMVSGLEYGEMQQESWLHFLFKSQINRPPGSRAKVFGDLDRVGLGGNLDVLAAKAECCYEQARKKEPPPSPNDAQQALEICRQVFRTDPHNSACLPVYLAAMVELKMKSQLFYTAHQLVEAGPKQAVSWFAVACYYHLLDKNELAQRYFLKSTKLDGRFAPAWIGFGNAFAAQEETDQAVSAYRTAARLFQGSHLALLYIG 735
AYAYLDNRPRAAVWLRTALEIDARCVEALQCLTRWHLLSIDEQAS+VSGLEYGE QQESWLHFLFKSQINRPPG RAKVFGDL+RVGLGGNLDVLAAKAECCYEQ NDAQQALEICRQVFRTDPHNSACLPVYLAAMVELKMKSQLFYTAHQLVEAGPKQAVSWFAVACYYHLLDKNELAQRYFLK+TKLDGRFAPAWIGFGNAFAAQEETDQAVSAYRTAARLFQGSHLALLYIG
Sbjct: 354 AYAYLDNRPRAAVWLRTALEIDARCVEALQCLTRWHLLSIDEQASLVSGLEYGEEQQESWLHFLFKSQINRPPGCRAKVFGDLNRVGLGGNLDVLAAKAECCYEQ----------NDAQQALEICRQVFRTDPHNSACLPVYLAAMVELKMKSQLFYTAHQLVEAGPKQAVSWFAVACYYHLLDKNELAQRYFLKATKLDGRFAPAWIGFGNAFAAQEETDQAVSAYRTAARLFQGSHLALLYIG 588
BLAST of mRNA_Ecto-sp13_S_contig14616.3547.1 vs. uniprot
Match: F0YB38_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YB38_AURAN) HSP 1 Score: 225 bits (573), Expect = 2.970e-68 Identity = 123/249 (49.40%), Postives = 165/249 (66.27%), Query Frame = 1
Query: 1 AYAYLDNRPRAAVWLRTALEIDARCVEALQCLTRWHLLSIDEQASMVSGLEYGEM-QQESWLHFLFKSQ--INRPPGSRAKVFGDLDRV-GLGGNLDVLAAKAECCYEQARKKEPPPSPNDAQQALEICRQVFRTDPHNSACLPVYLAAMVELKMKSQLFYTAHQLVEAGPKQAVSWFAVACYYHLLDKNELAQRYFLKSTKLDGRFAPAWIGFGNAFAAQEETDQAVSAYRTAARLFQGSHLALLYIG 735
AY L+NR RA WL AL +DA C EAL L LLS E+ ++ L ++W+ ++ ++ ++ S + FG L+RV GLG N +VL A+AE Y Q +D + A + R+V+ DP++ AC+PVYLA+MVEL +K +LFY AH+LV A PK A SWFAV CYY L+ KN+ AQRYF KS KL RFAPAWIGFGNAFAAQ+E++QA++AYR+A+RLFQGSH+ L++IG
Sbjct: 22 AYEALENRSRAVAWLVRALRLDATCSEALTFLVERRLLSAVEEKRLLGELRAALTGDDDAWIAAVYGARLCVHDAEQSVEERFGGLERVHGLGENAEVLCARAEHSYYQ----------HDCRGAHALARRVYGADPYDFACVPVYLASMVELGLKHELFYCAHELVRAYPKHAASWFAVGCYYLLVGKNDAAQRYFHKSAKLAPRFAPAWIGFGNAFAAQDESEQAMAAYRSASRLFQGSHVPLMFIG 260
BLAST of mRNA_Ecto-sp13_S_contig14616.3547.1 vs. uniprot
Match: A0A8J2SGE9_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SGE9_9STRA) HSP 1 Score: 220 bits (560), Expect = 1.500e-64 Identity = 121/250 (48.40%), Postives = 163/250 (65.20%), Query Frame = 1
Query: 1 AYAYLDNRPRAAVWLRTALEIDARCVEALQCLTRWHLLSIDEQASMVSGLEYG-EMQQESWLHFLFKSQI---NRPPGSRAKVFGDLDRV-GLGGNLDVLAAKAECCYEQARKKEPPPSPNDAQQALEICRQVFRTDPHNSACLPVYLAAMVELKMKSQLFYTAHQLVEAGPKQAVSWFAVACYYHLLDKNELAQRYFLKSTKLDGRFAPAWIGFGNAFAAQEETDQAVSAYRTAARLFQGSHLALLYIG 735
AY L+NRPR+ WL AL +DA C EAL + LLS DE+A + E +W+ ++ +++ + P A F L+RV GLG N +VL A+AE CY + +D + A E+ R+V DP++ C PVYLA++VEL K +LF TAH+L +A P++A SWFAV CYY L+ KN+ AQR+F K+ KL RFAPAWIGFGNAFAAQ+E++QA++AYRTA+RLFQGSH+ L YIG
Sbjct: 172 AYEALENRPRSVAWLVRALRLDAGCAEALDFVVDRRLLSADEEAWLRDETAAALEGSDRAWVAAVYGARLGCRDADPAGDAARFEALERVHGLGDNQEVLRARAERCY----------TAHDYRGAYEVARRVRERDPYDFGCAPVYLASLVELGAKHELFSTAHELAKAYPQKACSWFAVGCYYLLVKKNDQAQRHFHKACKLAPRFAPAWIGFGNAFAAQDESEQAMAAYRTASRLFQGSHVPLAYIG 411
BLAST of mRNA_Ecto-sp13_S_contig14616.3547.1 vs. uniprot
Match: A0A1V9Y5D3_9STRA (Cell division cycle protein 16 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Y5D3_9STRA) HSP 1 Score: 201 bits (510), Expect = 5.570e-57 Identity = 106/245 (43.27%), Postives = 156/245 (63.67%), Query Frame = 1
Query: 13 LDNRPRAAVWLRTALEIDARCVEALQCLTRWHLLSIDEQASMVSGLEYGEMQQESWLHFLFKSQINRP---PGSRAKVFGDLDRV-GLGGNLDVLAAKAECCYEQARKKEPPPSPNDAQQALEICRQVFRTDPHNSACLPVYLAAMVELKMKSQLFYTAHQLVEAGPKQAVSWFAVACYYHLLDKNELAQRYFLKSTKLDGRFAPAWIGFGNAFAAQEETDQAVSAYRTAARLFQGSHLALLYIG 735
L++R RAA W R AL+ DA C +A L H+L+ +++ M L + + +L L+ +Q+ R P + K F ++ V GL N+DV+ AKAE + Q ++ +A ++C+ V DP+N C+PVY+A +V+L+ KS+LF+ AHQ+V+ PK+A +W+ V CYY L+ K + AQR+F K+T ++ FAPAWIGFGNAFAAQ+E+DQA+S+YRTA RLF G H LL IG
Sbjct: 209 LESRERAAYWYRLALQCDAHCADAFTNLAEKHMLTPEQERRMFESLHFRH-PHDDYLKALYAAQLGRYDQFPTIQEK-FQPVEEVFGLSENVDVVVAKAEASFYQ----------HNTDKAYQLCKWVRERDPYNYKCIPVYVATLVQLERKSELFHFAHQMVDMYPKKAAAWYTVGCYYVLVKKFDTAQRFFHKATNIEPHFAPAWIGFGNAFAAQDESDQAMSSYRTATRLFLGCHFPLLCIG 441
BLAST of mRNA_Ecto-sp13_S_contig14616.3547.1 vs. uniprot
Match: W7TEU1_9STRA (Anaphase-promoting complex subunit 6 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TEU1_9STRA) HSP 1 Score: 199 bits (507), Expect = 1.420e-55 Identity = 110/270 (40.74%), Postives = 153/270 (56.67%), Query Frame = 1
Query: 4 YAYLDNRPRAAVWLRTALEIDARCVEALQCLTRWHLLSIDEQASMVS--------GLEYGEMQQ--------ESWLHFLFKSQI----------NRPPGSRAKVFGDLDRVGLGGNLDVLAAKAECCYEQARKKEPPPSPNDAQQALEICRQVFRTDPHNSACLPVYLAAMVELKMKSQLFYTAHQLVEAGPKQAVSWFAVACYYHLLDKNELAQRYFLKSTKLDGRFAPAWIGFGNAFAAQEETDQAVSAYRTAARLFQGSHLALLYIG 735
+A DNR RA W R ALE+D CVEAL+ L LLS +E+ +++ E GE + WL ++ +++ + + F L+ +G G + L A+A Y +D A +C+Q+ DP CLP+YLA++ EL++K++L+Y AH+LV+ P+ AV+WF V CYY + KNE AQRYF K+ KLD F PAWIGFGNAFAAQ+E+DQA++AYRTAARLF +HL LLY G
Sbjct: 324 FAGQDNRERAVAWCRHALEVDVYCVEALEFLADRKLLSQEEEQRLLARELAFDPGSEEEGEEDAAGTEQVVGDDWLRLMYATRLLCFSDGVLSAEEQHQTIHRAFAGLEALGFGRDAATLTAQAALAYYYQ---------HDLAGAHRLCQQIRTQDPFFDKCLPLYLASLAELRLKTELYYAAHRLVDTQPRSAVAWFGVGCYYVCIHKNETAQRYFHKAAKLDHTFVPAWIGFGNAFAAQDESDQAMAAYRTAARLFPSAHLPLLYTG 584
BLAST of mRNA_Ecto-sp13_S_contig14616.3547.1 vs. uniprot
Match: A0A485L1C5_9STRA (Aste57867_14695 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L1C5_9STRA) HSP 1 Score: 196 bits (499), Expect = 2.120e-55 Identity = 107/244 (43.85%), Postives = 150/244 (61.48%), Query Frame = 1
Query: 13 LDNRPRAAVWLRTALEIDARCVEALQCLTRWHLLSIDEQASMVSGLEYGEMQQESWLHFLFKSQINR--PPGSRAKVFGDLDRV-GLGGNLDVLAAKAECCYEQARKKEPPPSPNDAQQALEICRQVFRTDPHNSACLPVYLAAMVELKMKSQLFYTAHQLVEAGPKQAVSWFAVACYYHLLDKNELAQRYFLKSTKLDGRFAPAWIGFGNAFAAQEETDQAVSAYRTAARLFQGSHLALLYIG 735
+++R RAA W AL+ D C EA L H+LS ++ + L + + E +L + SQ+ R P S + F ++ GL GN DVL AKAE Y Q D ++A IC+ + P + C+PVY++ MV+L+ KS+LF+ AHQ+V+ PK+A +W+AV CYY L+ E AQR+F K+T L+ FAPAWIGFG+AFA Q+E+DQA+S+YRTA+RLF G HL LL IG
Sbjct: 212 MESRDRAAYWYELALKCDVHCCEAFMHLVEKHMLSSLQERQLFESLVFLNPEDE-YLKSFYASQLGRYDPSPSIPEKFQAIETTHGLKGNSDVLVAKAEAYYYQL----------DTEKAYAICKSIREEAPCDYNCIPVYVSTMVQLEKKSELFHFAHQMVDTYPKKAAAWYAVGCYYLLIGNFEAAQRFFHKATNLEPHFAPAWIGFGHAFAVQDESDQAMSSYRTASRLFLGCHLPLLCIG 444
BLAST of mRNA_Ecto-sp13_S_contig14616.3547.1 vs. uniprot
Match: A0A0L0D5N3_THETB (Cell division cycle 16 n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0D5N3_THETB) HSP 1 Score: 196 bits (497), Expect = 3.270e-55 Identity = 98/251 (39.04%), Postives = 153/251 (60.96%), Query Frame = 1
Query: 4 YAYLDNRPRAAVWLRTALEIDARCVEALQCLTRWHLLSIDEQASMVSGLEYGEMQQESWLHFLFKSQINRPPGSR-------AKVFGDLDRVGLGGNLDVLAAKAECCYEQARKKEPPPSPNDAQQALEICRQVFRTDPHNSACLPVYLAAMVELKMKSQLFYTAHQLVEAGPKQAVSWFAVACYYHLLDKNELAQRYFLKSTKLDGRFAPAWIGFGNAFAAQEETDQAVSAYRTAARLFQGSHLALLYIG 735
Y ++NR RAA W AL+ D CVEA + + + LLS+ E+A++V+ L + + E+WL L+K+++N GS + G+ V L N D++ A+A Y+ + AL + RQV DP+++A LP+++A +VELK +LF AH L E P A++W+AV CYY+ ++ + A+++F ++T LDG F AW+GFG++FA + E DQA++AYRTAARL +GSHL L++G
Sbjct: 217 YEEMENRDRAATWYLNALDADYHCVEAFEVIVQRQLLSLAEEAALVASLPFRD--NEAWLEVLYKAKLNNKYGSSLADLNAAVQALGETAGVRLESNTDIVVARARAAYDAHALDD----------ALRLARQVLAEDPYHAAALPLFIATLVELKATQELFRKAHALAEQYPDSALAWYAVGCYYYTVEDHGKARQFFSRATALDGNFGAAWLGFGHSFAVESEHDQAMAAYRTAARLCKGSHLPNLFVG 455
BLAST of mRNA_Ecto-sp13_S_contig14616.3547.1 vs. uniprot
Match: A0A6G0WU26_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WU26_9STRA) HSP 1 Score: 196 bits (497), Expect = 4.010e-55 Identity = 108/244 (44.26%), Postives = 150/244 (61.48%), Query Frame = 1
Query: 13 LDNRPRAAVWLRTALEIDARCVEALQCLTRWHLLSIDEQASMVSGLEYGEMQQESWLHFLFKSQINR--PPGSRAKVFGDLDRV-GLGGNLDVLAAKAECCYEQARKKEPPPSPNDAQQALEICRQVFRTDPHNSACLPVYLAAMVELKMKSQLFYTAHQLVEAGPKQAVSWFAVACYYHLLDKNELAQRYFLKSTKLDGRFAPAWIGFGNAFAAQEETDQAVSAYRTAARLFQGSHLALLYIG 735
L++R RAA W AL D C EA L H+L+ ++ ++ L + + E +L + SQ+ R P S + F ++ GL GN DVL AKAE Y Q D + A ICR + +DP + +PVY++ +V+L+ KS+LF+ AHQ+V PK+A +W+AV CYY LL+ E AQRYF K+T L+ FAPAWIGFG+AFA Q+E+DQA+++YRTA+RLF G HL LL IG
Sbjct: 206 LESRERAAYWYALALRCDVHCCEAFMHLVEKHMLTSVQERTLFESLSFTSPEDE-YLKCFYASQLGRYDPSPSIPEKFHAVESTHGLLGNPDVLVAKAEAYYYQL----------DTEHAYSICRGLRESDPCDYKYIPVYVSTLVQLEKKSELFHFAHQMVGTYPKKAAAWYAVGCYYFLLENFEAAQRYFHKATHLEPHFAPAWIGFGHAFAVQDESDQAMASYRTASRLFLGCHLPLLCIG 438
BLAST of mRNA_Ecto-sp13_S_contig14616.3547.1 vs. uniprot
Match: A0A3P3YHQ4_PLABS (Uncharacterized protein n=2 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A3P3YHQ4_PLABS) HSP 1 Score: 193 bits (490), Expect = 2.070e-54 Identity = 100/244 (40.98%), Postives = 150/244 (61.48%), Query Frame = 1
Query: 13 LDNRPRAAVWLRTALEIDARCVEALQCLTRWHLLSIDEQASMVSGLEYGEMQQESWLHFLFKSQINRPPGSRAKVF---GDLDRVGLGGNLDVLAAKAECCYEQARKKEPPPSPNDAQQALEICRQVFRTDPHNSACLPVYLAAMVELKMKSQLFYTAHQLVEAGPKQAVSWFAVACYYHLLDKNELAQRYFLKSTKLDGRFAPAWIGFGNAFAAQEETDQAVSAYRTAARLFQGSHLALLYIG 735
L+NR R+ W + A+ D RC +A + + +L ++E+ + L + + WL L+ +I++ + V +GL N +VLA +A+ Y N Q A ++ +++ DP++ LPVYL ++VELK KS LFY AHQLVE+ P +A++WFAVACYY+L+ K ++A+RYF KST +DG F +W+GFG+AF AQ+E DQA+SAYRTA RLF+GSH+ LL +G
Sbjct: 196 LENRHRSVYWFKQAVLQDVRCYDAFSRIVQERMLPLEEELAFFQQLVFPPGYE--WLRDLYACEISQHSHEKDAVSEHAAAAASIGLHDNSNVLACQAQHAYNC----------NQFQAAHDLSQRIMEKDPYHDGVLPVYLCSLVELKRKSDLFYCAHQLVESYPNKAIAWFAVACYYYLIGKYDIARRYFSKSTSVDGHFVSSWVGFGHAFGAQDECDQAMSAYRTAERLFKGSHVPLLCLG 427 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14616.3547.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig14616.3547.1 >prot_Ecto-sp13_S_contig14616.3547.1 ID=prot_Ecto-sp13_S_contig14616.3547.1|Name=mRNA_Ecto-sp13_S_contig14616.3547.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=245bp AYAYLDNRPRAAVWLRTALEIDARCVEALQCLTRWHLLSIDEQASMVSGLback to top mRNA from alignment at Ecto-sp13_S_contig14616:805..4373- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig14616.3547.1 ID=mRNA_Ecto-sp13_S_contig14616.3547.1|Name=mRNA_Ecto-sp13_S_contig14616.3547.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3569bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14616:805..4373- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig14616:805..4373- >mRNA_Ecto-sp13_S_contig14616.3547.1 ID=mRNA_Ecto-sp13_S_contig14616.3547.1|Name=mRNA_Ecto-sp13_S_contig14616.3547.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=735bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14616:805..4373- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |