mRNA_Ecto-sp13_S_contig14616.3547.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig14616.3547.1
Unique NamemRNA_Ecto-sp13_S_contig14616.3547.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig14616.3547.1 vs. uniprot
Match: D8LN33_ECTSI (Putative subunit of the Anaphase Promoting Complex n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN33_ECTSI)

HSP 1 Score: 469 bits (1207), Expect = 2.330e-158
Identity = 233/245 (95.10%), Postives = 233/245 (95.10%), Query Frame = 1
Query:    1 AYAYLDNRPRAAVWLRTALEIDARCVEALQCLTRWHLLSIDEQASMVSGLEYGEMQQESWLHFLFKSQINRPPGSRAKVFGDLDRVGLGGNLDVLAAKAECCYEQARKKEPPPSPNDAQQALEICRQVFRTDPHNSACLPVYLAAMVELKMKSQLFYTAHQLVEAGPKQAVSWFAVACYYHLLDKNELAQRYFLKSTKLDGRFAPAWIGFGNAFAAQEETDQAVSAYRTAARLFQGSHLALLYIG 735
            AYAYLDNRPRAAVWLRTALEIDARCVEALQCLTRWHLLSIDEQASMVSGLEYGE QQESWLHFLFKSQINRPPGSRAKVFGDL RVGLGGNLDVLAAKAECCYEQ          NDAQQALEICRQVFRTDPHNSACLPVYLAAMVELKMKSQLFYTAHQLVEAGPKQAVSWFAVACYYHLLDKNELAQRYFLKSTKLDGRFAPAWIGFGNAFAAQEETDQAVSAYRTAARLFQGSHLALLYIG
Sbjct:  295 AYAYLDNRPRAAVWLRTALEIDARCVEALQCLTRWHLLSIDEQASMVSGLEYGEEQQESWLHFLFKSQINRPPGSRAKVFGDLGRVGLGGNLDVLAAKAECCYEQ----------NDAQQALEICRQVFRTDPHNSACLPVYLAAMVELKMKSQLFYTAHQLVEAGPKQAVSWFAVACYYHLLDKNELAQRYFLKSTKLDGRFAPAWIGFGNAFAAQEETDQAVSAYRTAARLFQGSHLALLYIG 529          
BLAST of mRNA_Ecto-sp13_S_contig14616.3547.1 vs. uniprot
Match: A0A6H5JPV4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPV4_9PHAE)

HSP 1 Score: 466 bits (1198), Expect = 5.510e-158
Identity = 230/245 (93.88%), Postives = 233/245 (95.10%), Query Frame = 1
Query:    1 AYAYLDNRPRAAVWLRTALEIDARCVEALQCLTRWHLLSIDEQASMVSGLEYGEMQQESWLHFLFKSQINRPPGSRAKVFGDLDRVGLGGNLDVLAAKAECCYEQARKKEPPPSPNDAQQALEICRQVFRTDPHNSACLPVYLAAMVELKMKSQLFYTAHQLVEAGPKQAVSWFAVACYYHLLDKNELAQRYFLKSTKLDGRFAPAWIGFGNAFAAQEETDQAVSAYRTAARLFQGSHLALLYIG 735
            AYAYLDNRPRAAVWLRTALEIDARCVEALQCLTRWHLLSIDEQAS+VSGLEYGE QQESWLHFLFKSQINRPPG RAKVFGDL+RVGLGGNLDVLAAKAECCYEQ          NDAQQALEICRQVFRTDPHNSACLPVYLAAMVELKMKSQLFYTAHQLVEAGPKQAVSWFAVACYYHLLDKNELAQRYFLK+TKLDGRFAPAWIGFGNAFAAQEETDQAVSAYRTAARLFQGSHLALLYIG
Sbjct:  354 AYAYLDNRPRAAVWLRTALEIDARCVEALQCLTRWHLLSIDEQASLVSGLEYGEEQQESWLHFLFKSQINRPPGCRAKVFGDLNRVGLGGNLDVLAAKAECCYEQ----------NDAQQALEICRQVFRTDPHNSACLPVYLAAMVELKMKSQLFYTAHQLVEAGPKQAVSWFAVACYYHLLDKNELAQRYFLKATKLDGRFAPAWIGFGNAFAAQEETDQAVSAYRTAARLFQGSHLALLYIG 588          
BLAST of mRNA_Ecto-sp13_S_contig14616.3547.1 vs. uniprot
Match: F0YB38_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YB38_AURAN)

HSP 1 Score: 225 bits (573), Expect = 2.970e-68
Identity = 123/249 (49.40%), Postives = 165/249 (66.27%), Query Frame = 1
Query:    1 AYAYLDNRPRAAVWLRTALEIDARCVEALQCLTRWHLLSIDEQASMVSGLEYGEM-QQESWLHFLFKSQ--INRPPGSRAKVFGDLDRV-GLGGNLDVLAAKAECCYEQARKKEPPPSPNDAQQALEICRQVFRTDPHNSACLPVYLAAMVELKMKSQLFYTAHQLVEAGPKQAVSWFAVACYYHLLDKNELAQRYFLKSTKLDGRFAPAWIGFGNAFAAQEETDQAVSAYRTAARLFQGSHLALLYIG 735
            AY  L+NR RA  WL  AL +DA C EAL  L    LLS  E+  ++  L        ++W+  ++ ++  ++    S  + FG L+RV GLG N +VL A+AE  Y Q          +D + A  + R+V+  DP++ AC+PVYLA+MVEL +K +LFY AH+LV A PK A SWFAV CYY L+ KN+ AQRYF KS KL  RFAPAWIGFGNAFAAQ+E++QA++AYR+A+RLFQGSH+ L++IG
Sbjct:   22 AYEALENRSRAVAWLVRALRLDATCSEALTFLVERRLLSAVEEKRLLGELRAALTGDDDAWIAAVYGARLCVHDAEQSVEERFGGLERVHGLGENAEVLCARAEHSYYQ----------HDCRGAHALARRVYGADPYDFACVPVYLASMVELGLKHELFYCAHELVRAYPKHAASWFAVGCYYLLVGKNDAAQRYFHKSAKLAPRFAPAWIGFGNAFAAQDESEQAMAAYRSASRLFQGSHVPLMFIG 260          
BLAST of mRNA_Ecto-sp13_S_contig14616.3547.1 vs. uniprot
Match: A0A8J2SGE9_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SGE9_9STRA)

HSP 1 Score: 220 bits (560), Expect = 1.500e-64
Identity = 121/250 (48.40%), Postives = 163/250 (65.20%), Query Frame = 1
Query:    1 AYAYLDNRPRAAVWLRTALEIDARCVEALQCLTRWHLLSIDEQASMVSGLEYG-EMQQESWLHFLFKSQI---NRPPGSRAKVFGDLDRV-GLGGNLDVLAAKAECCYEQARKKEPPPSPNDAQQALEICRQVFRTDPHNSACLPVYLAAMVELKMKSQLFYTAHQLVEAGPKQAVSWFAVACYYHLLDKNELAQRYFLKSTKLDGRFAPAWIGFGNAFAAQEETDQAVSAYRTAARLFQGSHLALLYIG 735
            AY  L+NRPR+  WL  AL +DA C EAL  +    LLS DE+A +        E    +W+  ++ +++   +  P   A  F  L+RV GLG N +VL A+AE CY          + +D + A E+ R+V   DP++  C PVYLA++VEL  K +LF TAH+L +A P++A SWFAV CYY L+ KN+ AQR+F K+ KL  RFAPAWIGFGNAFAAQ+E++QA++AYRTA+RLFQGSH+ L YIG
Sbjct:  172 AYEALENRPRSVAWLVRALRLDAGCAEALDFVVDRRLLSADEEAWLRDETAAALEGSDRAWVAAVYGARLGCRDADPAGDAARFEALERVHGLGDNQEVLRARAERCY----------TAHDYRGAYEVARRVRERDPYDFGCAPVYLASLVELGAKHELFSTAHELAKAYPQKACSWFAVGCYYLLVKKNDQAQRHFHKACKLAPRFAPAWIGFGNAFAAQDESEQAMAAYRTASRLFQGSHVPLAYIG 411          
BLAST of mRNA_Ecto-sp13_S_contig14616.3547.1 vs. uniprot
Match: A0A1V9Y5D3_9STRA (Cell division cycle protein 16 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Y5D3_9STRA)

HSP 1 Score: 201 bits (510), Expect = 5.570e-57
Identity = 106/245 (43.27%), Postives = 156/245 (63.67%), Query Frame = 1
Query:   13 LDNRPRAAVWLRTALEIDARCVEALQCLTRWHLLSIDEQASMVSGLEYGEMQQESWLHFLFKSQINRP---PGSRAKVFGDLDRV-GLGGNLDVLAAKAECCYEQARKKEPPPSPNDAQQALEICRQVFRTDPHNSACLPVYLAAMVELKMKSQLFYTAHQLVEAGPKQAVSWFAVACYYHLLDKNELAQRYFLKSTKLDGRFAPAWIGFGNAFAAQEETDQAVSAYRTAARLFQGSHLALLYIG 735
            L++R RAA W R AL+ DA C +A   L   H+L+ +++  M   L +     + +L  L+ +Q+ R    P  + K F  ++ V GL  N+DV+ AKAE  + Q          ++  +A ++C+ V   DP+N  C+PVY+A +V+L+ KS+LF+ AHQ+V+  PK+A +W+ V CYY L+ K + AQR+F K+T ++  FAPAWIGFGNAFAAQ+E+DQA+S+YRTA RLF G H  LL IG
Sbjct:  209 LESRERAAYWYRLALQCDAHCADAFTNLAEKHMLTPEQERRMFESLHFRH-PHDDYLKALYAAQLGRYDQFPTIQEK-FQPVEEVFGLSENVDVVVAKAEASFYQ----------HNTDKAYQLCKWVRERDPYNYKCIPVYVATLVQLERKSELFHFAHQMVDMYPKKAAAWYTVGCYYVLVKKFDTAQRFFHKATNIEPHFAPAWIGFGNAFAAQDESDQAMSSYRTATRLFLGCHFPLLCIG 441          
BLAST of mRNA_Ecto-sp13_S_contig14616.3547.1 vs. uniprot
Match: W7TEU1_9STRA (Anaphase-promoting complex subunit 6 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TEU1_9STRA)

HSP 1 Score: 199 bits (507), Expect = 1.420e-55
Identity = 110/270 (40.74%), Postives = 153/270 (56.67%), Query Frame = 1
Query:    4 YAYLDNRPRAAVWLRTALEIDARCVEALQCLTRWHLLSIDEQASMVS--------GLEYGEMQQ--------ESWLHFLFKSQI----------NRPPGSRAKVFGDLDRVGLGGNLDVLAAKAECCYEQARKKEPPPSPNDAQQALEICRQVFRTDPHNSACLPVYLAAMVELKMKSQLFYTAHQLVEAGPKQAVSWFAVACYYHLLDKNELAQRYFLKSTKLDGRFAPAWIGFGNAFAAQEETDQAVSAYRTAARLFQGSHLALLYIG 735
            +A  DNR RA  W R ALE+D  CVEAL+ L    LLS +E+  +++          E GE           + WL  ++ +++               +  + F  L+ +G G +   L A+A   Y            +D   A  +C+Q+   DP    CLP+YLA++ EL++K++L+Y AH+LV+  P+ AV+WF V CYY  + KNE AQRYF K+ KLD  F PAWIGFGNAFAAQ+E+DQA++AYRTAARLF  +HL LLY G
Sbjct:  324 FAGQDNRERAVAWCRHALEVDVYCVEALEFLADRKLLSQEEEQRLLARELAFDPGSEEEGEEDAAGTEQVVGDDWLRLMYATRLLCFSDGVLSAEEQHQTIHRAFAGLEALGFGRDAATLTAQAALAYYYQ---------HDLAGAHRLCQQIRTQDPFFDKCLPLYLASLAELRLKTELYYAAHRLVDTQPRSAVAWFGVGCYYVCIHKNETAQRYFHKAAKLDHTFVPAWIGFGNAFAAQDESDQAMAAYRTAARLFPSAHLPLLYTG 584          
BLAST of mRNA_Ecto-sp13_S_contig14616.3547.1 vs. uniprot
Match: A0A485L1C5_9STRA (Aste57867_14695 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L1C5_9STRA)

HSP 1 Score: 196 bits (499), Expect = 2.120e-55
Identity = 107/244 (43.85%), Postives = 150/244 (61.48%), Query Frame = 1
Query:   13 LDNRPRAAVWLRTALEIDARCVEALQCLTRWHLLSIDEQASMVSGLEYGEMQQESWLHFLFKSQINR--PPGSRAKVFGDLDRV-GLGGNLDVLAAKAECCYEQARKKEPPPSPNDAQQALEICRQVFRTDPHNSACLPVYLAAMVELKMKSQLFYTAHQLVEAGPKQAVSWFAVACYYHLLDKNELAQRYFLKSTKLDGRFAPAWIGFGNAFAAQEETDQAVSAYRTAARLFQGSHLALLYIG 735
            +++R RAA W   AL+ D  C EA   L   H+LS  ++  +   L +   + E +L   + SQ+ R  P  S  + F  ++   GL GN DVL AKAE  Y Q           D ++A  IC+ +    P +  C+PVY++ MV+L+ KS+LF+ AHQ+V+  PK+A +W+AV CYY L+   E AQR+F K+T L+  FAPAWIGFG+AFA Q+E+DQA+S+YRTA+RLF G HL LL IG
Sbjct:  212 MESRDRAAYWYELALKCDVHCCEAFMHLVEKHMLSSLQERQLFESLVFLNPEDE-YLKSFYASQLGRYDPSPSIPEKFQAIETTHGLKGNSDVLVAKAEAYYYQL----------DTEKAYAICKSIREEAPCDYNCIPVYVSTMVQLEKKSELFHFAHQMVDTYPKKAAAWYAVGCYYLLIGNFEAAQRFFHKATNLEPHFAPAWIGFGHAFAVQDESDQAMSSYRTASRLFLGCHLPLLCIG 444          
BLAST of mRNA_Ecto-sp13_S_contig14616.3547.1 vs. uniprot
Match: A0A0L0D5N3_THETB (Cell division cycle 16 n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0D5N3_THETB)

HSP 1 Score: 196 bits (497), Expect = 3.270e-55
Identity = 98/251 (39.04%), Postives = 153/251 (60.96%), Query Frame = 1
Query:    4 YAYLDNRPRAAVWLRTALEIDARCVEALQCLTRWHLLSIDEQASMVSGLEYGEMQQESWLHFLFKSQINRPPGSR-------AKVFGDLDRVGLGGNLDVLAAKAECCYEQARKKEPPPSPNDAQQALEICRQVFRTDPHNSACLPVYLAAMVELKMKSQLFYTAHQLVEAGPKQAVSWFAVACYYHLLDKNELAQRYFLKSTKLDGRFAPAWIGFGNAFAAQEETDQAVSAYRTAARLFQGSHLALLYIG 735
            Y  ++NR RAA W   AL+ D  CVEA + + +  LLS+ E+A++V+ L + +   E+WL  L+K+++N   GS         +  G+   V L  N D++ A+A   Y+     +          AL + RQV   DP+++A LP+++A +VELK   +LF  AH L E  P  A++W+AV CYY+ ++ +  A+++F ++T LDG F  AW+GFG++FA + E DQA++AYRTAARL +GSHL  L++G
Sbjct:  217 YEEMENRDRAATWYLNALDADYHCVEAFEVIVQRQLLSLAEEAALVASLPFRD--NEAWLEVLYKAKLNNKYGSSLADLNAAVQALGETAGVRLESNTDIVVARARAAYDAHALDD----------ALRLARQVLAEDPYHAAALPLFIATLVELKATQELFRKAHALAEQYPDSALAWYAVGCYYYTVEDHGKARQFFSRATALDGNFGAAWLGFGHSFAVESEHDQAMAAYRTAARLCKGSHLPNLFVG 455          
BLAST of mRNA_Ecto-sp13_S_contig14616.3547.1 vs. uniprot
Match: A0A6G0WU26_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WU26_9STRA)

HSP 1 Score: 196 bits (497), Expect = 4.010e-55
Identity = 108/244 (44.26%), Postives = 150/244 (61.48%), Query Frame = 1
Query:   13 LDNRPRAAVWLRTALEIDARCVEALQCLTRWHLLSIDEQASMVSGLEYGEMQQESWLHFLFKSQINR--PPGSRAKVFGDLDRV-GLGGNLDVLAAKAECCYEQARKKEPPPSPNDAQQALEICRQVFRTDPHNSACLPVYLAAMVELKMKSQLFYTAHQLVEAGPKQAVSWFAVACYYHLLDKNELAQRYFLKSTKLDGRFAPAWIGFGNAFAAQEETDQAVSAYRTAARLFQGSHLALLYIG 735
            L++R RAA W   AL  D  C EA   L   H+L+  ++ ++   L +   + E +L   + SQ+ R  P  S  + F  ++   GL GN DVL AKAE  Y Q           D + A  ICR +  +DP +   +PVY++ +V+L+ KS+LF+ AHQ+V   PK+A +W+AV CYY LL+  E AQRYF K+T L+  FAPAWIGFG+AFA Q+E+DQA+++YRTA+RLF G HL LL IG
Sbjct:  206 LESRERAAYWYALALRCDVHCCEAFMHLVEKHMLTSVQERTLFESLSFTSPEDE-YLKCFYASQLGRYDPSPSIPEKFHAVESTHGLLGNPDVLVAKAEAYYYQL----------DTEHAYSICRGLRESDPCDYKYIPVYVSTLVQLEKKSELFHFAHQMVGTYPKKAAAWYAVGCYYFLLENFEAAQRYFHKATHLEPHFAPAWIGFGHAFAVQDESDQAMASYRTASRLFLGCHLPLLCIG 438          
BLAST of mRNA_Ecto-sp13_S_contig14616.3547.1 vs. uniprot
Match: A0A3P3YHQ4_PLABS (Uncharacterized protein n=2 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A3P3YHQ4_PLABS)

HSP 1 Score: 193 bits (490), Expect = 2.070e-54
Identity = 100/244 (40.98%), Postives = 150/244 (61.48%), Query Frame = 1
Query:   13 LDNRPRAAVWLRTALEIDARCVEALQCLTRWHLLSIDEQASMVSGLEYGEMQQESWLHFLFKSQINRPPGSRAKVF---GDLDRVGLGGNLDVLAAKAECCYEQARKKEPPPSPNDAQQALEICRQVFRTDPHNSACLPVYLAAMVELKMKSQLFYTAHQLVEAGPKQAVSWFAVACYYHLLDKNELAQRYFLKSTKLDGRFAPAWIGFGNAFAAQEETDQAVSAYRTAARLFQGSHLALLYIG 735
            L+NR R+  W + A+  D RC +A   + +  +L ++E+ +    L +    +  WL  L+  +I++    +  V         +GL  N +VLA +A+  Y            N  Q A ++ +++   DP++   LPVYL ++VELK KS LFY AHQLVE+ P +A++WFAVACYY+L+ K ++A+RYF KST +DG F  +W+GFG+AF AQ+E DQA+SAYRTA RLF+GSH+ LL +G
Sbjct:  196 LENRHRSVYWFKQAVLQDVRCYDAFSRIVQERMLPLEEELAFFQQLVFPPGYE--WLRDLYACEISQHSHEKDAVSEHAAAAASIGLHDNSNVLACQAQHAYNC----------NQFQAAHDLSQRIMEKDPYHDGVLPVYLCSLVELKRKSDLFYCAHQLVESYPNKAIAWFAVACYYYLIGKYDIARRYFSKSTSVDGHFVSSWVGFGHAFGAQDECDQAMSAYRTAERLFKGSHVPLLCLG 427          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14616.3547.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LN33_ECTSI2.330e-15895.10Putative subunit of the Anaphase Promoting Complex... [more]
A0A6H5JPV4_9PHAE5.510e-15893.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
F0YB38_AURAN2.970e-6849.40Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]
A0A8J2SGE9_9STRA1.500e-6448.40Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
A0A1V9Y5D3_9STRA5.570e-5743.27Cell division cycle protein 16 n=1 Tax=Achlya hypo... [more]
W7TEU1_9STRA1.420e-5540.74Anaphase-promoting complex subunit 6 n=2 Tax=Monod... [more]
A0A485L1C5_9STRA2.120e-5543.85Aste57867_14695 protein n=1 Tax=Aphanomyces stella... [more]
A0A0L0D5N3_THETB3.270e-5539.04Cell division cycle 16 n=1 Tax=Thecamonas trahens ... [more]
A0A6G0WU26_9STRA4.010e-5544.26Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A3P3YHQ4_PLABS2.070e-5440.98Uncharacterized protein n=2 Tax=Plasmodiophora bra... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14616contigEcto-sp13_S_contig14616:805..4373 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score471.9
Seed ortholog evalue1.9e-130
Seed eggNOG ortholog2880.D8LN33
Model size735
KEGG koko:K03353
KEGG Pathwayko04110,ko04111,ko04113,ko04114,ko04120,ko04914,ko05166,map04110,map04111,map04113,map04114,map04120,map04914,map05166
KEGG ModuleM00389
Hectar predicted targeting categoryother localisation
Exons6
EggNOG free text desc.cell division
EggNOG OGsKOG1173@1,KOG1173@2759
Ec32 ortholog descriptionPutative subunit of the Anaphase Promoting Complex
Ec32 orthologEc-05_003300.1
Cds size735
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01009,ko03036,ko04121
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14616.3547.1prot_Ecto-sp13_S_contig14616.3547.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig14616 805..4373 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462780.99144-CDS-Ecto-sp13_S_contig14616:804..9541681462780.99144-CDS-Ecto-sp13_S_contig14616:804..954Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14616 805..954 -
1681462781.001013-CDS-Ecto-sp13_S_contig14616:1363..15101681462781.001013-CDS-Ecto-sp13_S_contig14616:1363..1510Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14616 1364..1510 -
1681462781.008589-CDS-Ecto-sp13_S_contig14616:1987..20801681462781.008589-CDS-Ecto-sp13_S_contig14616:1987..2080Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14616 1988..2080 -
1681462781.0195346-CDS-Ecto-sp13_S_contig14616:2827..29381681462781.0195346-CDS-Ecto-sp13_S_contig14616:2827..2938Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14616 2828..2938 -
1681462781.0287235-CDS-Ecto-sp13_S_contig14616:3287..34201681462781.0287235-CDS-Ecto-sp13_S_contig14616:3287..3420Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14616 3288..3420 -
1681462781.0381935-CDS-Ecto-sp13_S_contig14616:4272..43731681462781.0381935-CDS-Ecto-sp13_S_contig14616:4272..4373Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14616 4273..4373 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig14616.3547.1

>prot_Ecto-sp13_S_contig14616.3547.1 ID=prot_Ecto-sp13_S_contig14616.3547.1|Name=mRNA_Ecto-sp13_S_contig14616.3547.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=245bp
AYAYLDNRPRAAVWLRTALEIDARCVEALQCLTRWHLLSIDEQASMVSGL
EYGEMQQESWLHFLFKSQINRPPGSRAKVFGDLDRVGLGGNLDVLAAKAE
CCYEQARKKEPPPSPNDAQQALEICRQVFRTDPHNSACLPVYLAAMVELK
MKSQLFYTAHQLVEAGPKQAVSWFAVACYYHLLDKNELAQRYFLKSTKLD
GRFAPAWIGFGNAFAAQEETDQAVSAYRTAARLFQGSHLALLYIG
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mRNA from alignment at Ecto-sp13_S_contig14616:805..4373-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig14616.3547.1 ID=mRNA_Ecto-sp13_S_contig14616.3547.1|Name=mRNA_Ecto-sp13_S_contig14616.3547.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3569bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14616:805..4373- (Ectocarpus species13 EcNAP12_S_4_19m)
GCGTACGCTTACCTGGACAACCGGCCGAGGGCGGCCGTGTGGCTCCGGAC CGCGCTGGAGATCGACGCTCGCTGCGTGGAGGCTCTGCAGTGCTTGACAC GGTACGGGGTGTGCCGCGCCGCATGCACCTTGAGTCGCTGTTCCGTTTAG TCGGAGGTGGGGTGGGGTGCATGCTCTGTTTCTTTATCTGTCTCTTGCCC TGTCTGTCTCTGTCTCTGTCTGTGTCTCTGTCTCTGTCTCTGTCTGTGTC TCTGTCTCTGTCTCTCTCTGTCTCTGTCTTTAACTCTGGCTCTTGCTCTT GCTCTTGCTCTTTCTCTTTCTCTTTCTCTTGCTCTGGCTCTGTCTCTCTC CGTGTCTCTCTCTCGCTCTCTCTCGGTGTGAGTGTGCAATAGAGTACCGC GGCGTGCGTCTTCTGTGTCAGAGGTCTCGTTAGCACCAATCAAATGTGTG TAGCCCCGATGCCGACCTCTAGTACTCTCGTCAATCGCACAAGAGTAAAC AGTAAGTAGTTGATCGACAGGCCGGGAACGGACGGGGCGTTTTATCCGCT GTGCGTACCGTCGCTAAACAATGCTTTGGGTAGTGTGTGTCGGCCAGGTA ATGGGCGTGACGAAAGCGCATCAAGGAACGCCTAACCAGGGAAAAGGAAC GTTAAAACCCGAAAAATAGCTGAAGAGAAACCCACGTTGCCGTTCAACAC AAAAGGATTTTTGTTGTCCAGTGCGCATGCATTCTAAAAAAATCACCATC TCAGAAAGACTACCCGTCCAAGATATCACCGCCGTCGAAGGGGGGATGTT GGAAGTCTTTACATTGAGAGGGAGAAAAACCGATATTCTCGGGAGGAATT ATTTGTTGATCTTCACGATCGAACGTAAACGAAATGGCCTGTCGACGACC CCAACAACAATCCCCGATCTATTGATGAATACTACAATCGCAATCCGATT CAGATGGCACCTGCTGAGCATTGACGAGCAGGCTTCGATGGTGTCCGGCT TGGAGTACGGAGAGATGCAGCAGGAGAGCTGGCTGCACTTCTTGTTTAAG TCGCAGATTAACCGACCCCCGGGCTCCAGGGCAAAGGTGAGACAAGACGA GTCCCTACACGATTCACTTCGGGGCCTCATGTTCTTGCCTGCCAGTTTTC CGGCTCCCCCTCCCCGCCGGGAGCCCCGCGGAATGGAAGATCCGCCATTG GTTGTGTAGTGTTTCAAGGGACTGATTGCAGAGCCGCGTGTGTGATAAGT GACGTGACCTGATCCCAAGCGTGGCGTGGAAGACTCCCTCTTTGTCTCGC TTTTCCTTCCCGTTTATTTTTTTTCGCGTTTGCACGGAGCCGCGTGTGCG ATGTGACGTGATCTCAATCTTAACCACTAAAGAACACCGCCTTCTGTGTC TCGCTTTTCTTCTCGCATTGTTTGACTCTACGCAGGTGTTCGGGGACTTG GATCGCGTCGGTCTCGGAGGCAACCTGGACGTGCTAGCCGCCAAGGCAGA GTGCTGCTACGAGCAGGCGAGAAAGAAAGAACCACCCCCTTCGCCTGTGT GTGTGTGTGGGGGGGGGATTGCGGTTGAGCACGGTTGTGCCTAAGAGTCA CGCCCCCGCCCGAACAGCGGAGTGCATTCTCCCTTTTTTCGTCTTTCGCG TGTGTGACGATTTTGACTCAGGGAGGCTCTCCTCTGTGTTGATATTGTCG TGGCAGCTCATTGTTACTAACACTGATGGTACGCGGCCAGGTGATATCCG AGTTAATCTTCAAAAACAACCTTGAGGCCTGGTTGAGGTCCGGCCGACTC GGAGTCGTGGATAGGTGTATACGATCGGGCTTGGGCTCTCATTTTGAGGT GCTAGCGGGAGCGCAGGGGCCAACTGTGTTGGATCCAGTAGCCTACGCAG GTTTTCATCCAGCAAACACGTGGGATACAGTATGGAGTCGGTGGAATTTC GGTTAGGGATAGGAGTAAGGGTCAATGTATTCATCTCTATTTGGATAGAA CTTGATTTTTTTCGCGTGGGCAGTCCGGCCGTTGGATCCGATGCGCTGCC CGCAGAAGAGCTTTGTAGGGTTATGCGGGGGCAAGGCCTATCGTAGCTAG AACGACGAACTCTCTTTGACGGCTTGACGAAACCGTGGGAGGCTCTCTCC GTCAAACCAACCATCCACGCCAGCAAGTTGCGGATAATAATTAGCATTTT GTATTCCAAATAGAAGTACGCCGTAAACGAAGCTTCCGTCTTCTCTTGTA TCTTGTCGTGTTCCTTGCCTCTTCTCTGTTGGCTTGGCCCCAGAACGACG CCCAGCAAGCGCTGGAGATCTGCAGACAGGTGTTCCGGACCGACCCGCAC AACTCGGCGTGTCTCCCGGTTTACCTCGCGGCGATGGTGAGTCAGTCGGC CAGTCGGGTAGCGAACTCGATCGATCCGGTCTTGGTGCGCGTGGAGGCAG GGGGAGTAGAATGTAAGAGCTGTAAAAGCCAGCTGAGCCATCTTTGCTAC CTGTAGCTTTTCCAGGGAAGCCGATAGCTGGTTAAGCCAGCGAGGATAGC GGTGTTATTAAGACCGACCATTTTACCACAAAGGAAACTTGTTTGGATCT CTCTCTCTCTCTCGTTTGCTCTCTCTGTGTCTCCCTCTCCGTATCGTGTC CGTCGTCTAGTTGTTCTTTGTCGCATCGCAATATGGGACACTTTTTTTTT GTTTCTTTCACCGGAACCAAGCTCCGGATGAAGAATCGGCCTTTGCGTGC AATCTCGGCAGACCGCACGGACAGAGTCAGGTCATTTTTGTGTGTCGCAT TTTCCTGCCTTCACCCCGTTTTTCTTTGCTCTCTTGTCGACCCTGCTGTG CGCAACAACCAAGGTGGAGCTGAAGATGAAGAGCCAGCTGTTCTACACGG CCCACCAGCTGGTGGAAGCGGGGCCGAAGCAGGCGGTCTCGTGGTTCGCC GTGGCCTGCTACTACCACCTCCTGGACAAGAACGAACTGGCCCAGCGCTA CTTCCTCAAGGTGAATCAACCTTGGGGACAAAAGATTGGGGTGGGGGTAC GCAGAATTTAGGTACAGGGGGGGCTCTGCAGATGATCTGTACCATCACCT CTTCGACAAGAACGGGCTGGCCCAGCGCTACTTTTTCAACGTTGCAAGTA AGATGGGGCACGACGTTGCACTGTACTACTACAATGTGGTACACGTGTGT TGGTTACCCTTCTTGTGAGAATATGTGTATCCGTGTCTGCTTTGGTTGGT AGCTATCTCAGCCCCCCCGCCGCCAGCCGCCTCATACCCTGTTATTGTTT TACTTTTTCATCTGTGTTGTTGTGGCTCTCTCCCTTCCTCCCTCCCTCCC TCCCTCCCTCCCTCCCTCCCTCCCTCCTTCCATCCCTCCACGTGTCATCG TCTCGATACAAAACATTAGTCGACCAAGCTGGACGGGAGATTCGCGCCGG CGTGGATCGGTTTCGGGAACGCCTTCGCCGCTCAGGAGGAAACCGACCAG GCCGTCAGCGCCTACCGCACGGCGGCGCGCCTGTTCCAGGGCTCTCACCT AGCGCTGCTCTACATCGGT
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig14616:805..4373-

>mRNA_Ecto-sp13_S_contig14616.3547.1 ID=mRNA_Ecto-sp13_S_contig14616.3547.1|Name=mRNA_Ecto-sp13_S_contig14616.3547.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=735bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14616:805..4373- (Ectocarpus species13 EcNAP12_S_4_19m)
GCGTACGCTTACCTGGACAACCGGCCGAGGGCGGCCGTGTGGCTCCGGAC
CGCGCTGGAGATCGACGCTCGCTGCGTGGAGGCTCTGCAGTGCTTGACAC
GATGGCACCTGCTGAGCATTGACGAGCAGGCTTCGATGGTGTCCGGCTTG
GAGTACGGAGAGATGCAGCAGGAGAGCTGGCTGCACTTCTTGTTTAAGTC
GCAGATTAACCGACCCCCGGGCTCCAGGGCAAAGGTGTTCGGGGACTTGG
ATCGCGTCGGTCTCGGAGGCAACCTGGACGTGCTAGCCGCCAAGGCAGAG
TGCTGCTACGAGCAGGCGAGAAAGAAAGAACCACCCCCTTCGCCTAACGA
CGCCCAGCAAGCGCTGGAGATCTGCAGACAGGTGTTCCGGACCGACCCGC
ACAACTCGGCGTGTCTCCCGGTTTACCTCGCGGCGATGGTGGAGCTGAAG
ATGAAGAGCCAGCTGTTCTACACGGCCCACCAGCTGGTGGAAGCGGGGCC
GAAGCAGGCGGTCTCGTGGTTCGCCGTGGCCTGCTACTACCACCTCCTGG
ACAAGAACGAACTGGCCCAGCGCTACTTCCTCAAGTCGACCAAGCTGGAC
GGGAGATTCGCGCCGGCGTGGATCGGTTTCGGGAACGCCTTCGCCGCTCA
GGAGGAAACCGACCAGGCCGTCAGCGCCTACCGCACGGCGGCGCGCCTGT
TCCAGGGCTCTCACCTAGCGCTGCTCTACATCGGT
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