mRNA_Ecto-sp13_S_contig14607.3537.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig14607.3537.1 vs. uniprot
Match: D8LJJ8_ECTSI (Protein phosphatase, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJJ8_ECTSI) HSP 1 Score: 121 bits (303), Expect = 6.600e-32 Identity = 58/58 (100.00%), Postives = 58/58 (100.00%), Query Frame = 1
Query: 1 GWRVDMEDSHTIVANVAGLEGHSFVAVFDGHGGALCAAYAGENMMRHVMETAEFAEYA 174
GWRVDMEDSHTIVANVAGLEGHSFVAVFDGHGGALCAAYAGENMMRHVMETAEFAEYA
Sbjct: 32 GWRVDMEDSHTIVANVAGLEGHSFVAVFDGHGGALCAAYAGENMMRHVMETAEFAEYA 89
BLAST of mRNA_Ecto-sp13_S_contig14607.3537.1 vs. uniprot
Match: A0A6H5KCZ0_9PHAE (PPM-type phosphatase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCZ0_9PHAE) HSP 1 Score: 108 bits (271), Expect = 2.680e-28 Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 1
Query: 16 MEDSHTIVANVAGLEGHSFVAVFDGHGGALCAAYAGENMMRHVMETAEFAEYA 174
MEDSHTIVANVAGLEGHSFVAVFDGHGGALCAAYAGENMMRHVMETAEFAEYA
Sbjct: 1 MEDSHTIVANVAGLEGHSFVAVFDGHGGALCAAYAGENMMRHVMETAEFAEYA 53
BLAST of mRNA_Ecto-sp13_S_contig14607.3537.1 vs. uniprot
Match: A0A835ZAX4_9STRA (Phosphatase 2C-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAX4_9STRA) HSP 1 Score: 79.3 bits (194), Expect = 5.170e-16 Identity = 34/57 (59.65%), Postives = 44/57 (77.19%), Query Frame = 1
Query: 1 GWRVDMEDSHTIVANVAGLEGHSFVAVFDGHGGALCAAYAGENMMRHVMETAEFAEY 171
GWRV+MEDSHTI+ + GL HSFVAV+DGHGG++CA YAG+ MMR + T ++ Y
Sbjct: 40 GWRVEMEDSHTIITAMPGLPNHSFVAVYDGHGGSMCATYAGKEMMRFLRATPDYEAY 96
BLAST of mRNA_Ecto-sp13_S_contig14607.3537.1 vs. uniprot
Match: A0A835ZBU3_9STRA (Phosphatase 2C-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBU3_9STRA) HSP 1 Score: 68.9 bits (167), Expect = 3.070e-12 Identity = 33/57 (57.89%), Postives = 39/57 (68.42%), Query Frame = 1
Query: 1 GWRVDMEDSHTIVANVAGLEGHSFVAVFDGHGGALCAAYAGENMMRHVMETAEFAEY 171
GWR MED+H I +A L GHSFVAVFDGHGGA CA +A + M + V +T EF Y
Sbjct: 47 GWRDAMEDAHIICPRLADLPGHSFVAVFDGHGGAACARFAAQTMPQLVEDTQEFRRY 103
BLAST of mRNA_Ecto-sp13_S_contig14607.3537.1 vs. uniprot
Match: A0A4D9CRJ3_9STRA (PPM-type phosphatase domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CRJ3_9STRA) HSP 1 Score: 67.4 bits (163), Expect = 9.000e-12 Identity = 31/58 (53.45%), Postives = 41/58 (70.69%), Query Frame = 1
Query: 1 GWRVDMEDSHTIVANV-AGLEGHSFVAVFDGHGGALCAAYAGENMMRHVMETAEFAEY 171
GWRV+MED+HT++ + LEGHSF+AV+DGHGG A YAG++M V T + EY
Sbjct: 31 GWRVEMEDAHTVIETMDPELEGHSFIAVYDGHGGQYSAIYAGKHMADFVRRTVAYTEY 88
BLAST of mRNA_Ecto-sp13_S_contig14607.3537.1 vs. uniprot
Match: A0A7S2V4V3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4V3_9STRA) HSP 1 Score: 65.5 bits (158), Expect = 4.450e-11 Identity = 28/57 (49.12%), Postives = 39/57 (68.42%), Query Frame = 1
Query: 1 GWRVDMEDSHTIVANVAGLEGHSFVAVFDGHGGALCAAYAGENMMRHVMETAEFAEY 171
GWRV+MED HTI ++ GL+ HS VAV+DGHGG A +AG+ ++ + + AEY
Sbjct: 31 GWRVEMEDQHTIEVHLTGLQDHSLVAVYDGHGGQFAAKFAGKTLVAEFLSSESVAEY 87
BLAST of mRNA_Ecto-sp13_S_contig14607.3537.1 vs. uniprot
Match: A0A6U5FKN3_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A6U5FKN3_9STRA) HSP 1 Score: 63.2 bits (152), Expect = 3.020e-10 Identity = 28/57 (49.12%), Postives = 39/57 (68.42%), Query Frame = 1
Query: 1 GWRVDMEDSHTIVANVAGLEGHSFVAVFDGHGGALCAAYAGENMMRHVMETAEFAEY 171
GWRV+MED H + N+ L+G SF AVFDGHGG+ + YA N++R + ET + +Y
Sbjct: 31 GWRVEMEDEHILATNLPKLDGTSFFAVFDGHGGSFTSYYAKGNLVRLLSETESYTKY 87
BLAST of mRNA_Ecto-sp13_S_contig14607.3537.1 vs. uniprot
Match: A0A7S2PS74_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PS74_9STRA) HSP 1 Score: 62.0 bits (149), Expect = 7.970e-10 Identity = 27/57 (47.37%), Postives = 38/57 (66.67%), Query Frame = 1
Query: 1 GWRVDMEDSHTIVANVAGLEGHSFVAVFDGHGGALCAAYAGENMMRHVMETAEFAEY 171
GWRV+MEDSHT+V ++ L F +DGHGG+ +AYAG+++M E EF +Y
Sbjct: 31 GWRVEMEDSHTLVGSIPALPTMGFFGCYDGHGGSYTSAYAGDHLMNIFSERPEFKQY 87
BLAST of mRNA_Ecto-sp13_S_contig14607.3537.1 vs. uniprot
Match: A0A7S2WUD6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WUD6_9STRA) HSP 1 Score: 61.2 bits (147), Expect = 1.480e-9 Identity = 28/57 (49.12%), Postives = 39/57 (68.42%), Query Frame = 1
Query: 1 GWRVDMEDSHTIVANVAGLEGHSFVAVFDGHGGALCAAYAGENMMRHVMETAEFAEY 171
GWR++MED+HTI +V GL GHS AVFDGHGG A +A E+++ + + +F Y
Sbjct: 32 GWRMEMEDAHTIEPDVVGLPGHSLFAVFDGHGGHNAAVFASEHLLPCLTKLDKFKAY 88
BLAST of mRNA_Ecto-sp13_S_contig14607.3537.1 vs. uniprot
Match: UPI0018A80B51 (LOW QUALITY PROTEIN: probable protein phosphatase 2C T23F11.1 n=1 Tax=Lucilia sericata TaxID=13632 RepID=UPI0018A80B51) HSP 1 Score: 59.7 bits (143), Expect = 2.310e-9 Identity = 26/56 (46.43%), Postives = 40/56 (71.43%), Query Frame = 1
Query: 1 GWRVDMEDSHTIVANVAGLEGHSFVAVFDGHGGALCAAYAGENMMRHVMETAEFAE 168
GWR++MEDSHT + ++ G SF AV+DGHGGA A YAG+++ + +++ E+ E
Sbjct: 31 GWRINMEDSHTHILSLPDDPGTSFFAVYDGHGGATVAQYAGKHLHKFILKRPEYKE 86 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14607.3537.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig14607.3537.1 >prot_Ecto-sp13_S_contig14607.3537.1 ID=prot_Ecto-sp13_S_contig14607.3537.1|Name=mRNA_Ecto-sp13_S_contig14607.3537.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=53bp MEDSHTIVANVAGLEGHSFVAVFDGHGGALCAAYAGENMMRHVMETAEFAback to top mRNA from alignment at Ecto-sp13_S_contig14607:3134..3307+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig14607.3537.1 ID=mRNA_Ecto-sp13_S_contig14607.3537.1|Name=mRNA_Ecto-sp13_S_contig14607.3537.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=174bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14607:3134..3307+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig14607:3134..3307+ >mRNA_Ecto-sp13_S_contig14607.3537.1 ID=mRNA_Ecto-sp13_S_contig14607.3537.1|Name=mRNA_Ecto-sp13_S_contig14607.3537.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=159bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14607:3134..3307+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |