mRNA_Ecto-sp13_S_contig14560.3501.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig14560.3501.1 vs. uniprot
Match: A0A6H5JVI2_9PHAE (Amino_oxidase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JVI2_9PHAE) HSP 1 Score: 559 bits (1440), Expect = 3.090e-195 Identity = 288/300 (96.00%), Postives = 292/300 (97.33%), Query Frame = 1
Query: 4 FFAATSGRDRAASVSKSLQPSATRITESRENALSAVSVGKEIDPVYGGDKAATEVVVVGAGVGGLATAARLAKAGCRVTVVEKNSEEDIGGRLNELVMEGGFRFDTGPSLLLLPETYRETFAELGRDSDDFFEMRRVSPTYKVYFDDGESVDLSDDEEELRRQMDRLEDDGFDKYKAYLDGAQLNLEVGLPNFIEEKFTPGRLPEFAWGALFNSPLENHYGQLSRRFDNPKMRALLSFQDLYVGLSPYSAPAVFSLLQAIELRDGVYYPMGGFARVGEALGTVCRDLGVKFRFDSPVSEV 903
FFAATSG RAASV KSLQPSATRITESRENALSAVSVGKEIDPVYGG+KAATEVVVVGAGVGGLATAARLAKAGCRVTVVEKNSEEDIGGRLNEL+MEGGFRFDTGPSLLLLPETYRETFA LGRDSDDFFEMRRVSPTYKVYFDDGESVDLSDDE ELRRQMDRLEDDGFDKYKAYLD AQLNLEVGLPNFIEEKFTPGRLPEFA GALFNSPLENHYGQL RRFD+PKMRALLSFQDLYVGLSPY+APAVFSLLQAIELRDGVYYPMGGFARVGEALGTVCRDLGVKFRFDSPVSEV
Sbjct: 70 FFAATSGLHRAASVLKSLQPSATRITESRENALSAVSVGKEIDPVYGGEKAATEVVVVGAGVGGLATAARLAKAGCRVTVVEKNSEEDIGGRLNELLMEGGFRFDTGPSLLLLPETYRETFAALGRDSDDFFEMRRVSPTYKVYFDDGESVDLSDDEGELRRQMDRLEDDGFDKYKAYLDSAQLNLEVGLPNFIEEKFTPGRLPEFALGALFNSPLENHYGQLRRRFDSPKMRALLSFQDLYVGLSPYNAPAVFSLLQAIELRDGVYYPMGGFARVGEALGTVCRDLGVKFRFDSPVSEV 369
BLAST of mRNA_Ecto-sp13_S_contig14560.3501.1 vs. uniprot
Match: A0A7S0CRG6_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0CRG6_9EUKA) HSP 1 Score: 252 bits (643), Expect = 2.020e-76 Identity = 127/257 (49.42%), Postives = 183/257 (71.21%), Query Frame = 1
Query: 163 EVVVVGAGVGGLATAARLAKAGCR---VTVVEKNSEEDIG-GRLNELVMEGG----FRFDTGPSLLLLPETYRETFAELGRDSDDFFEMRRVSPTYKVYFDDGESVDLSDDEEELRRQMDRLEDDGFDKYKAYLDGAQLNLEVGLPNFIEEKFTPG--RLPEFAWGALFNSPLENHYGQLSRRFDNPKMRALLSFQDLYVGLSPYSAPAVFSLLQAIELRDGVYYPMGGFARVGEALGTVCRDLGVKFRFDSPVSEV 903
++V++GAGVGGLA AARLAK + + V+EKNS + G GR+ E+ + G +RF+TGPSL+LLP+ YR+ F ++G D D FF+++RV P ++ F D SV SDD+ +++RQ++ LE DGF KY++Y+ A NL+ GLP FI++ G +LPEF + L PL +H+ QL + FD +M+AL+SFQDLY+GLSPY APAVFSLLQ+IE G+YYP+GGF+++ +AL VC + GV+ ++DSPVS +
Sbjct: 8 DIVIIGAGVGGLAMAARLAKNKKKFEKIKVLEKNSRPEAGAGRVGEITLRGPNEEIYRFETGPSLMLLPDIYRKLFTDIGYDMDSFFKIQRVMPAFRAIFSDNISVTFSDDQADMQRQLNALEIDGFQKYQSYMKWADTNLDAGLPLFIQQDLASGAPKLPEFLFNCLRYWPLFSHHKQLGQFFDTDRMKALMSFQDLYIGLSPYEAPAVFSLLQSIEYTRGIYYPIGGFSKISQALIQVCEENGVEIQYDSPVSRI 264
BLAST of mRNA_Ecto-sp13_S_contig14560.3501.1 vs. uniprot
Match: A0A6U4CWI0_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4CWI0_9STRA) HSP 1 Score: 247 bits (631), Expect = 2.260e-74 Identity = 132/256 (51.56%), Postives = 174/256 (67.97%), Query Frame = 1
Query: 142 GGDKAATEVVVVGAGVGGLATAARLAKAGCRVTVVEKNSEEDIGGRLNELVMEGGFRFDTGPSLLLLPETYRETFAELGRDSDDFFEMRRVSPTYKVYFDDGESVDLSDDEEELRRQMDRLEDDGFDKYKAYLDGAQLNLEVGLPNFIEEKFTPGRLPEFAWGALF--NSPLENHYGQLSRRFDNPKMRALLSFQDLYVGLSPYSAPAVFSLLQAIELRDGVYYPMGGFARVGEALGTVCRDLGVKFRFDSPVSEV 903
GG K+ T +VGAGVG L +AA LA+ G +V + EKN E+ +GGR+N+ V+EG RF+ GPSLLLLP+ YR+TFA G D D+ + RV PTYK YFDDG L + + + ++ +E +++YK Y++ A++NLE G PNFIEEK T LP+F AL N PL +H L + F K+ AL SFQDLYVGLSPY+APAVFSLL AIEL DGVYYP+GGF ++ +AL C +LGVKF F + V ++
Sbjct: 62 GGGKSVT---IVGAGVGSLVSAALLAQDGYKVEIFEKNPEDQVGGRINQAVIEG-CRFELGPSLLLLPDVYRKTFAACGLDLDEEMTIARVDPTYKAYFDDGTGFVLDPRDPDFKGNLEAIEAGSYEQYKKYMESAEINLEGGWPNFIEEKLTLDVLPKFIANALTPRNFPLLSHNQHLKQYFKTKKLNALFSFQDLYVGLSPYNAPAVFSLLTAIELSDGVYYPIGGFHQIPKALRRRCEELGVKFNFGAGVKKI 313
BLAST of mRNA_Ecto-sp13_S_contig14560.3501.1 vs. uniprot
Match: A0A0G4G440_VITBC (Amino_oxidase domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4G440_VITBC) HSP 1 Score: 242 bits (618), Expect = 1.300e-71 Identity = 125/249 (50.20%), Postives = 174/249 (69.88%), Query Frame = 1
Query: 169 VVVGAGVGGLATAARLAKAGCRVTVVEKNSEEDIGGRLNELVME---GGFRFDTGPSLLLLPETYRETFAELGRDSDDFFEMRRVSPTYKVYFDDGESVDLS-DDEEELRRQMDRLEDDGFDKYKAYLDGAQLNLEVGLPNFIEEKFTPGRLPEFAWGALFNSPLENHYGQLSRRFDNPKMRALLSFQDLYVGLSPYSAPAVFSLLQAIELRDGVYYPMGGFARVGEALGTVCRDLGVKFRFDSPVSEV 903
+VVGAG+GGL TA RLA+ G VTV+EKNSE +GGR+ E ++E G FRFDTG SL L+PE + ETF+ LG D ++R+V P Y ++++DG +++L+ + L+ Q+D+LEDDG+DK+ YLD A N G+PNFI+ +F+ + F L PL +H+ + R F NPK++AL++FQDLYVGLSPYSAPAVFSLLQAIE + GV+YP+GG+ V + L + R LGVK F++ V E+
Sbjct: 74 IVVGAGIGGLVTAGRLAREGFDVTVLEKNSEAMVGGRVGEELVETSKGRFRFDTGASLFLMPEIFEETFSSLGVALHDAIDLRKVEPPYMIFYEDGTALNLTMSNRALLKEQLDQLEDDGYDKFMRYLDAADGNRLFGVPNFIQFEFSFDSINAFLKSLLSMWPLSSHHTEAGRFFSNPKLQALVTFQDLYVGLSPYSAPAVFSLLQAIEFKQGVFYPVGGYHTVAKKLLQIVRSLGVKVHFNTNVKEI 322
BLAST of mRNA_Ecto-sp13_S_contig14560.3501.1 vs. uniprot
Match: A0A7S4DMK3_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S4DMK3_9EUKA) HSP 1 Score: 204 bits (519), Expect = 1.440e-58 Identity = 92/181 (50.83%), Postives = 138/181 (76.24%), Query Frame = 1
Query: 370 ELGRDSDDFFEMRRVSPTYKVYFDDGESVDLSDDEEELRRQMDRLEDDGFDKYKAYLDGAQLNLEVGLPNFIEEKFTPGR--LPEFAWGALFNSPLENHYGQLSRRFDNPKMRALLSFQDLYVGLSPYSAPAVFSLLQAIELRDGVYYPMGGFARVGEALGTVCRDLGVKFRFDSPVSEVR 906
++G+D D+ ++RV P ++V F DG SV LSDDEE++R+++D LE DG+DKY+ Y++ A +NL+ GLP FIE+ + G LP+F AL + PL++H+ QL F++ +M+AL SFQDLY+GLSPY+AP VFSLLQ+IEL +G+YYP+GGFA++ E + T+C D+GVK +D+ VS+++
Sbjct: 1 DVGKDMDEHISIQRVMPAFRVNFADGASVTLSDDEEKMRKELDSLEIDGYDKYRRYMEMADINLDAGLPLFIEQDWEKGLPVLPKFLINALLHWPLKSHHDQLGEFFESDRMKALFSFQDLYIGLSPYTAPGVFSLLQSIELTNGIYYPIGGFAKIAEKMKTLCEDMGVKIHYDTSVSQIQ 181
BLAST of mRNA_Ecto-sp13_S_contig14560.3501.1 vs. uniprot
Match: UPI00198BA352 (Phytoene desaturase n=1 Tax=Anaerolineales bacterium TaxID=2073117 RepID=UPI00198BA352) HSP 1 Score: 200 bits (508), Expect = 1.580e-58 Identity = 109/253 (43.08%), Postives = 156/253 (61.66%), Query Frame = 1
Query: 169 VVVGAGVGGLATAARLAKAGCRVTVVEKNSEEDIGGRLNELVMEGGFRFDTGPSLLLLPETYRETFAELGRDSDDFFEMRRVSPTYKVYFDDGESVDLSDDEEELRRQMDRLEDDGFDKYKAYLDGAQLNLEVGLPNFIEEKFTPGRLPEFAWGALFNSPL-------ENHYGQLSRRFDNPKMRALLSFQDLYVGLSPYSAPAVFSLLQAIELRDGVYYPMGGFARVGEALGTVCRDLGVKFRFDSPVSEVR 906
+V+GAG+GG+ATAARLAK G VTV+EKN E GGR N+++ GG RFD GP+L L+PE + ETFA LG D ++RR+ PTYKV FDDG ++L+ D +++ Q++++E F + Y+ + +V L F+ F F + +L N PL HY R F + +++A +FQ++Y+GLSPY APA +SLLQ EL +GV+YPMGG +AL V LGVKF +D P +++
Sbjct: 6 IVIGAGIGGIATAARLAKNGYDVTVLEKN--ETPGGRCNQII-RGGHRFDIGPTLFLMPEVWEETFASLGEKMSDHLDLRRIDPTYKVRFDDGLQLELTSDIGKMQTQLEKVEKTAFTGFLNYIAEGSKHYKVSLEKFVGRNF----YNIFEYFSLANLPLIFQLKALGKHYANTGRFFKDERLKAAFTFQNMYLGLSPYDAPATYSLLQYTELAEGVWYPMGGMYAGIQALVNVAEKLGVKFIYDQPARKLK 251
BLAST of mRNA_Ecto-sp13_S_contig14560.3501.1 vs. uniprot
Match: A0A2U2S6Y7_9CHLR (Phytoene desaturase n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A2U2S6Y7_9CHLR) HSP 1 Score: 202 bits (515), Expect = 8.990e-58 Identity = 109/253 (43.08%), Postives = 164/253 (64.82%), Query Frame = 1
Query: 169 VVVGAGVGGLATAARLAKAGCRVTVVEKNSEEDIGGRLNELVMEGGFRFDTGPSLLLLPETYRETFAELGRDSDDFFEMRRVSPTYKVYFDDGESVDLSDDEEELRRQMDRLEDDGFDKYKAYLDGAQLNLEVGLPNFIEEKFTPGRLPEFAWGALFNSPL-------ENHYGQLSRRFDNPKMRALLSFQDLYVGLSPYSAPAVFSLLQAIELRDGVYYPMGGFARVGEALGTVCRDLGVKFRFDSPVSEVR 906
+V+GAG+GG+ATAARLAK G +VTV+EKN E GGR N++V +G RFD GP+L L+PE + ETFA LG D ++RR+ PTYKV+F+DG + L+ D E++RQ++ +E F + +Y+ + ++ L F+ F L E+ +L N PL + HY SR F + +++A +FQ++Y+GLSPY APA +SLLQ EL +GV+YP+GG +AL + ++LGVKF ++ PV +++
Sbjct: 8 IVIGAGIGGIATAARLAKNGYQVTVLEKN--EQPGGRCNQIVRDG-HRFDIGPTLFLMPEVWEETFAALGERMSDHLDLRRIDPTYKVHFEDGLQLQLTSDIGEMQRQLEAVEKTAFTGFLSYIAEGAKHYKISLEKFVGRNFYS--LLEYF--SLSNLPLIFQLKALDKHYRNTSRYFKDERLKAAFTFQNMYLGLSPYDAPATYSLLQYTELAEGVWYPIGGMYAAIQALTKIAQNLGVKFIYNMPVKKIQ 253
BLAST of mRNA_Ecto-sp13_S_contig14560.3501.1 vs. uniprot
Match: E4UPP5_ARTGP (Phytoene dehydrogenase n=1 Tax=Arthroderma gypseum (strain ATCC MYA-4604 / CBS 118893) TaxID=535722 RepID=E4UPP5_ARTGP) HSP 1 Score: 202 bits (513), Expect = 3.190e-57 Identity = 109/253 (43.08%), Postives = 167/253 (66.01%), Query Frame = 1
Query: 169 VVVGAGVGGLATAARLAKAGCRVTVVEKNSEEDIGGRLNELVMEGGFRFDTGPSLLLLPETYRETFAELGRD-SDDFFEMRRVSPTYKVYFDDGESVDLSDDEEELRRQMDRLEDD-GFDKYKAYLDGAQLNLEVGLPNFIEEKFTPGRL-----PEFAWGALFNSPLENHYGQLSRRFDNPKMRALLSFQDLYVGLSPYSAPAVFSLLQAIELRDGVYYPMGGFARVGEALGTVCRDLGVKFRFDSPVSEVR 906
++VGAG GG+ATAARLAK G VTVVEKNS IGGR + L+ E G+RFD GPSLLLLP+ + +TF +LG D+ ++ + P Y+++F D + VD+S D +++ +++R ED+ GFD+Y +Y+ + + ++ + + +++ F RL PEF + L P E+ Y + SR F + KMR + +F +Y+G+SP+ APA +SLLQ EL DG++YP GGF V EA+ + + GVK+R + PVS ++
Sbjct: 7 IIVGAGAGGVATAARLAKEGFEVTVVEKNSF--IGGRCS-LIQENGYRFDQGPSLLLLPKLFADTFKDLGTSMQDEGVQLLKCEPNYRIWFGDHDRVDMSTDMAKMKAEIERYEDEAGFDRYLSYMKESSRHHDLSMVHVLKKNFP--RLFSMLRPEFLFSTLTLHPFESIYSRASRYFASEKMRRVFTFASMYLGMSPFDAPATYSLLQYSELADGIWYPTGGFQAVLEAVANIGKRSGVKYRLNEPVSSIQ 254
BLAST of mRNA_Ecto-sp13_S_contig14560.3501.1 vs. uniprot
Match: A0A7V4ST32_9CHLR (Phytoene desaturase (Fragment) n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A7V4ST32_9CHLR) HSP 1 Score: 200 bits (508), Expect = 4.240e-57 Identity = 110/257 (42.80%), Postives = 159/257 (61.87%), Query Frame = 1
Query: 163 EVVVVGAGVGGLATAARLAKAGCRVTVVEKNSEEDIGGRLNELVMEGGFRFDTGPSLLLLPETYRETFAELGRDSDDFFEMRRVSPTYKVYFDDGESVDLSDDEEELRRQMDRLEDDGFDKYKAYLDGAQLNLEVGLPNFIEEKFTPGRLPEFAWG---ALFNSPL-------ENHYGQLSRRFDNPKMRALLSFQDLYVGLSPYSAPAVFSLLQAIELRDGVYYPMGGFARVGEALGTVCRDLGVKFRFDSPVSEV 903
EVVVVGAGVGG+A A RLA+AG RVTV EK + GGRL+ L +G F FD GPSLLL+P + ET+A LG DD ++ R+ PTY+V+F D S+DL+ D LR ++ +E ++ + + L +F+ F ++WG +L N PL HY +SR F +P++RA SFQ++Y+GLSP+ APA F+LLQ EL +G+++P GG +R+GE+L ++ LGV+FR+ PV+ +
Sbjct: 3 EVVVVGAGVGGVAVAGRLARAGHRVTVFEKRASS--GGRLSVLERDG-FHFDMGPSLLLMPPVFAETYASLGERMDDQLDLVRLDPTYRVHFHDDSSLDLTGDIPRLRTAVEAIEPGSTTSLLRFIAEGSNSYYISLEHFVGRNF-------YSWGEYLSLANLPLLFELKALVKHYDNVSRYFSDPRLRAAFSFQNMYLGLSPFDAPATFTLLQYTELGEGIWFPRGGMSRIGESLTSIAEGLGVRFRYGEPVARI 249
BLAST of mRNA_Ecto-sp13_S_contig14560.3501.1 vs. uniprot
Match: A0A3N5U9B0_9CHLR (Phytoene desaturase (Fragment) n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3N5U9B0_9CHLR) HSP 1 Score: 195 bits (495), Expect = 4.810e-57 Identity = 105/254 (41.34%), Postives = 161/254 (63.39%), Query Frame = 1
Query: 169 VVVGAGVGGLATAARLAKAGCRVTVVEKNSEEDIGGRLNELVMEGGFRFDTGPSLLLLPETYRETFAELGRDSDDFFEMRRVSPTYKVYFDDGESVDLSDDEEELRRQMDRLEDDGFDKYKAYLDGAQLNLEVGLPNFIEEKF-------TPGRLPEFAWGALFN-SPLENHYGQLSRRFDNPKMRALLSFQDLYVGLSPYSAPAVFSLLQAIELRDGVYYPMGGFARVGEALGTVCRDLGVKFRFDSPVSEVR 906
+V+GAG+GG+ATAARLAK G VTV+EK S GGR N++V +G RFD GP+L L+PE + ETFA LG D +++R+ PTYKV+F+DG ++L+ + +++ Q+D+++ F + Y+ + ++ + F+ F +PG LP LF L HY +S+ F + +++A +FQ++Y+GLSPY APA +SLLQ EL +GV+YPMGG EAL + LGVKF +++PV +++
Sbjct: 7 LVIGAGIGGIATAARLAKNGYDVTVLEKESTP--GGRCNQIVCDG-HRFDIGPTLFLMPEIWEETFAALGERMSDHLDLKRIDPTYKVHFEDGLQLELTSNLGDMQVQLDKVDKTAFTGFLNYIAEGGKHYKMSVEKFVGRNFYNIFQYFSPGNLP-----LLFQLKALRKHYANVSKYFTDERLKAAFTFQNMYLGLSPYDAPATYSLLQYTELAEGVWYPMGGMYAAIEALVKIAERLGVKFIYNAPVKKMK 252 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14560.3501.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig14560.3501.1 >prot_Ecto-sp13_S_contig14560.3501.1 ID=prot_Ecto-sp13_S_contig14560.3501.1|Name=mRNA_Ecto-sp13_S_contig14560.3501.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=306bp AFFAATSGRDRAASVSKSLQPSATRITESRENALSAVSVGKEIDPVYGGDback to top mRNA from alignment at Ecto-sp13_S_contig14560:327..4097- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig14560.3501.1 ID=mRNA_Ecto-sp13_S_contig14560.3501.1|Name=mRNA_Ecto-sp13_S_contig14560.3501.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3771bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14560:327..4097- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig14560:327..4097- >mRNA_Ecto-sp13_S_contig14560.3501.1 ID=mRNA_Ecto-sp13_S_contig14560.3501.1|Name=mRNA_Ecto-sp13_S_contig14560.3501.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=918bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14560:327..4097- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |