mRNA_Ecto-sp13_S_contig14530.3485.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
|
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig14530.3485.1 vs. uniprot
Match: D7G890_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G890_ECTSI) HSP 1 Score: 370 bits (950), Expect = 2.110e-120 Identity = 192/232 (82.76%), Postives = 205/232 (88.36%), Query Frame = 1
Query: 1 SFGVVCFEVITRTEPFKEMKPTQVIKAVVLNERRPQIPEWASASPHVVPLMEQCWKQVPAHRPDGFGPVVQALASVVSRDGDPRNHNAVAVDVTTSPGTQRSVGPSSDGVGAAPPTVSDGVEASPLVTEEEVGTTALPRDSGNVQAPSKDLLIAAKALAPSAGTSGDCKQLAEMIDHVVTTKNGDRLHQRPDHREMAKDIYDRAESLRKQGKYAQADPAYLEAIEIQQQALG 696
SFGVVCFEVITR EPFK M PTQVIKAVVLNERRPQIPEWAS SP VVPLMEQCWKQ P HRP+GFGPVVQ LASVVSR+GDPRNH+AVAVD T+SPGTQRSVGPSSDGVG AP +VSDGVEASPLV EEEVGTTALPRDSGNVQAPSKDLL+A KALAPSAGTSG+ KQL +MID V TK DRLHQRPDHREMAK +Y RAES RKQGKY +A+ YLEAIEIQ++ LG
Sbjct: 361 SFGVVCFEVITRMEPFKGMNPTQVIKAVVLNERRPQIPEWASGSPDVVPLMEQCWKQDPGHRPEGFGPVVQTLASVVSRNGDPRNHSAVAVDATSSPGTQRSVGPSSDGVGTAPDSVSDGVEASPLVAEEEVGTTALPRDSGNVQAPSKDLLLANKALAPSAGTSGEFKQLTDMIDEDVITKGEDRLHQRPDHREMAKGMYGRAESSRKQGKYVEANSLYLEAIEIQRKTLG 592
BLAST of mRNA_Ecto-sp13_S_contig14530.3485.1 vs. uniprot
Match: A0A6H5JUB0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUB0_9PHAE) HSP 1 Score: 300 bits (768), Expect = 4.880e-90 Identity = 168/232 (72.41%), Postives = 174/232 (75.00%), Query Frame = 1
Query: 1 SFGVVCFEVITRTEPFKEMKPTQVIKAVVLNERRPQIPEWASASPHVVPLMEQCWKQVPAHRPDGFGPVVQALASVVSRDGDPRNHNAVAVDVTTSPGTQRSVGPSSDGVGAAPPTVSDGVEASPLVTEEEVGTTALPRDSGNVQAPSKDLLIAAKALAPSAGTSGDCKQLAEMIDHVVTTKNGDRLHQRPDHREMAKDIYDRAESLRKQGKYAQADPAYLEAIEIQQQALG 696
SF VVCFEVITR EPFK M PTQVIKAVVLNER PQ+ E ASASPHVVPLMEQCWKQ P HRPDGFGP V+ LASVVSR+G PR+HNAVAVD T+SPGTQRSVGPSSDGVGAAP TVSDG EA PLV +EEVGTTALPRDSGNVQAPS DLLIA ALAPSAGTSG CKQL EMID VTTK ADPAYLEAIEIQQQ LG
Sbjct: 391 SFCVVCFEVITRMEPFKGMNPTQVIKAVVLNERLPQMLERASASPHVVPLMEQCWKQDPTHRPDGFGPEVKTLASVVSRNGHPRHHNAVAVDATSSPGTQRSVGPSSDGVGAAPDTVSDGFEALPLVAKEEVGTTALPRDSGNVQAPSMDLLIADTALAPSAGTSGGCKQLTEMIDQDVTTK---------------------------------ADPAYLEAIEIQQQTLG 589
BLAST of mRNA_Ecto-sp13_S_contig14530.3485.1 vs. uniprot
Match: D7FHK2_ECTSI (Peptidase-like n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHK2_ECTSI) HSP 1 Score: 251 bits (640), Expect = 6.770e-73 Identity = 136/182 (74.73%), Postives = 141/182 (77.47%), Query Frame = 1
Query: 151 MEQCWKQVPAHRPDGFGPVVQALASVVSRDGDPRNHNAVAVDVTTSPGTQRSVGPSSDGVGAAPPTVSDGVEASPLVTEEEVGTTALPRDSGNVQAPSKDLLIAAKALAPSAGTSGDCKQLAEMIDHVVTTKNGDRLHQRPDHREMAKDIYDRAESLRKQGKYAQADPAYLEAIEIQQQALG 696
MEQCWKQ P HRP+GFGPVVQALASVVSRDGDPRNH+AVAVD T+SPGTQRSVGPSSDGVG AP TVSDGVEASPLV EEEVGTTALPRDSGNVQ PSKDLL+A KALAPSAGTSG+CKQL EMID V TK GKYAQADPAYLEAIEIQQQ LG
Sbjct: 1 MEQCWKQDPGHRPEGFGPVVQALASVVSRDGDPRNHSAVAVDATSSPGTQRSVGPSSDGVGTAPDTVSDGVEASPLVAEEEVGTTALPRDSGNVQTPSKDLLLANKALAPSAGTSGECKQLTEMIDEEVATK----------------------------GKYAQADPAYLEAIEIQQQTLG 154
BLAST of mRNA_Ecto-sp13_S_contig14530.3485.1 vs. uniprot
Match: D7FHK3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHK3_ECTSI) HSP 1 Score: 213 bits (541), Expect = 6.860e-61 Identity = 124/250 (49.60%), Postives = 151/250 (60.40%), Query Frame = 1
Query: 40 EPFKEMKPTQVIKAVVLNERRPQIPEWASASPHVVPLMEQCWKQVPAHRPDGFGPVVQALASVVSRDGDPRNHNAVAVDVTTSPGTQRSVGPSSDGVGAAPPTVSDGVEASPLVTEEEVGTTALPRDSGNVQAPSKDLLIAAKALAPSAGTSGDCKQLAEMIDHVVTTKNGDRLHQR-------------------------------PDHREMAKDIYDRAESLRKQGKYAQADPAYLEAIEIQQQALG 696
+PFK M TQV+ AV +RPQIP+WASASP VVPLMEQCWKQ P HRP+GFGPVVQ L SVVSRDGDPRN +AV VD T+S G + S G P T SDG +ASP V E E TALP ++ +V AP DL I +ALAPS+G+SG+C Q+ E +D ++ K +R PD+REM KD+ RAE R +GKY++AD YLEA EIQQ+ LG
Sbjct: 2 QPFKGMNRTQVVNAVAWQGQRPQIPQWASASPDVVPLMEQCWKQDPGHRPEGFGPVVQTLTSVVSRDGDPRNRSAVDVDYTSSSGVKCSGGSPDIDARTTPATGSDGADASPRVAERESCATALPPEAESVHAPIADLPIVRQALAPSSGSSGECNQVTETVDEELSMKGTHEDEERFYTAVPVLFVKAIWKYARRGTALFCHFVWKCPDYREMWKDLQIRAEGSRNEGKYSEADFVYLEASEIQQKTLG 251
BLAST of mRNA_Ecto-sp13_S_contig14530.3485.1 vs. uniprot
Match: D8LQ15_ECTSI (Kinesin light chain-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ15_ECTSI) HSP 1 Score: 159 bits (402), Expect = 1.000e-39 Identity = 103/224 (45.98%), Postives = 123/224 (54.91%), Query Frame = 1
Query: 1 SFGVVCFEVITRTEPFKEMKPTQVIKAVVLNERRPQIPEWASASPHVVPLMEQCWKQVPAHRPDGFGPVVQALASVVSRDGDPRNHNAVAVDVTTSPGTQRSVGPSSDGVGAAPPTVSDGVEAS--------------PLVTEEEVGT--------------------------TALPRDSGNVQAPSKDLLIAAKALAPSAG-TSGDCKQLAEMIDHVVTTKN 549
SFGV+CFEV+TRTEPFK +P VI AV+ RP IPE ASASP VVPLMEQCW+Q P RP+GFGPVV+ALASVVSR GDPRNHNA A DVT+S G + G APPT S GV+A+ P + +++ T +P DSG V AP L IA+ L PS G TSG K +M + T+N
Sbjct: 361 SFGVLCFEVVTRTEPFKGKRPAHVIGAVLYRNERPHIPEEASASPDVVPLMEQCWRQDPVERPEGFGPVVRALASVVSRFGDPRNHNAAAADVTSSRGVKLG--------GTAPPTASSGVDAASGWSGAASQSTGADPWASPDQINQLPPAEPPSGRDDSTLEGGVARRAAKETVVP-DSGKVYAPFAYLPIASTDLPPSGGGTSGQFKNPTKMFGQKLRTEN 575
BLAST of mRNA_Ecto-sp13_S_contig14530.3485.1 vs. uniprot
Match: A0A6H5JY67_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY67_9PHAE) HSP 1 Score: 150 bits (378), Expect = 1.830e-36 Identity = 71/98 (72.45%), Postives = 81/98 (82.65%), Query Frame = 1
Query: 1 SFGVVCFEVITRTEPFKEMKPTQVIKAVVLNERRPQIPEWASASPHVVPLMEQCWKQVPAHRPDGFGPVVQALASVVSRDGDPRNHNAVAVDVTTSPG 294
SFGV+CFEV+TRTEPFK P VI+AV+ RPQIPE ASA+P VVPLMEQCW+Q P RP+GFGPVV+ALASVVSRDGDPRNHNA D+T+SPG
Sbjct: 361 SFGVLCFEVVTRTEPFKGRIPAHVIRAVLYENERPQIPEGASAAPEVVPLMEQCWRQDPVERPEGFGPVVRALASVVSRDGDPRNHNAATADLTSSPG 458
BLAST of mRNA_Ecto-sp13_S_contig14530.3485.1 vs. uniprot
Match: A0A6H5JLJ5_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JLJ5_9PHAE) HSP 1 Score: 132 bits (331), Expect = 2.300e-30 Identity = 93/217 (42.86%), Postives = 117/217 (53.92%), Query Frame = 1
Query: 1 SFGVVCFEVITRTEPFKEMKPTQVIKAVVLNERRPQIPEWASASPHVVPLMEQCWKQVPAHRPDGFGPVVQALASVVSRDGDPRNHNAVAVDVTTSPGTQRSVGPSSDGVGAAPPTVSDGVEASPLVTEE------EVGTTALPRD--------SGNVQ---------------------APSKDLLIAAKALAPSAGTSGDCKQLAEMIDHVVTTK 546
SFGV+CFEV TRTEPFK +P QVI AV+ RPQ+P+ ASASP VVPLME CWK+ P RP+GF PVV LA+VVSR GDPR+H A A+ ++S G SS A TV EAS L + GT+A R+ SG V APS DL IA++ PS G+S K+L++M ++T+
Sbjct: 361 SFGVLCFEVATRTEPFKGKRPAQVIGAVLYRNERPQLPQGASASPDVVPLMEHCWKEDPKERPEGFEPVVVTLANVVSRVGDPRHHGATAMRGSSSSGPNVYGDASSVAPSMARLTVGGEGEASGLTDSASQPAGADTGTSADERNALLPALSSSGRVFSALGRKSSRRAAKGTGGEHIFAPSADLPIASEGPLPSTGSSRLKKKLSKMFGQTLSTR 577
BLAST of mRNA_Ecto-sp13_S_contig14530.3485.1 vs. uniprot
Match: A0A6H5K2T5_9PHAE (PK_Tyr_Ser-Thr domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2T5_9PHAE) HSP 1 Score: 131 bits (329), Expect = 2.480e-30 Identity = 106/308 (34.42%), Postives = 135/308 (43.83%), Query Frame = 1
Query: 1 SFGVVCFEVITRTEPFKEMKPTQVIKAVVLNERRPQIPEWASASPHVVPLMEQCWKQVPAHRPDGFGPVVQALASVVSRDGDPRNHNAVAVDVTTSPGTQRSVGPSSDGVGAAPPTVSDGVEASPLVTEEEVGTTALPRDSGNVQAPSKDLLIAAKALAPSAGTSGDCKQLAEMIDHVVTTK--------------NGDRLHQR---------------------------PDHREMAKDIYDRAESLRKQ------------------------------------GKYAQADPAYLEAIEIQQQAL 693
S GVVCFEV TR +PFK M Q PAHRP GFGPVVQ LASV+S DGDPRN +AV D T+S G + S G P T SDG +ASP V +E G TALP ++ NV AP DL I +ALAPS+ SG+ Q E +D ++ K + +RL+ PD+REMAKD+++RAE RK+ GKYA+ADP +L AI+I+++ L
Sbjct: 241 SVGVVCFEVTTRMQPFKGMN---------------------------------LLTQDPAHRPKGFGPVVQTLASVMSHDGDPRNRSAVDADDTSSSGVKCSGGLPDIDARTTPATGSDGADASPRVAGKESGATALPPEAENVHAPIMDLPIVRQALAPSSERSGEYNQGTETVDEELSMKARNNFYLGCVGTHDDEERLYTAVPMLFVKAIWKNARSGTALFFHVAWKCPDYREMAKDLHNRAEGSRKEVTISENLACARFECLLSTVEEHAANIVGFARCELGEGKYAEADPLFLRAIDIRERTL 515
BLAST of mRNA_Ecto-sp13_S_contig14530.3485.1 vs. uniprot
Match: A0A6H5KS20_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS20_9PHAE) HSP 1 Score: 128 bits (321), Expect = 5.320e-29 Identity = 75/148 (50.68%), Postives = 91/148 (61.49%), Query Frame = 1
Query: 1 SFGVVCFEVITRTEPFKEMKPTQVIKAVVLNERRPQIPEWASASPHVVPLMEQCWKQVPAHRPDGFGPVVQALASVVSRDGDPRNHNAVAVDVTTSPGTQRS-VGPSSDGVGAAPPTVSDGVEASPL--VTEEEVGTTALPRDSGNVQ 435
SFGVVC+EV TR EPF+ M P QV++AV RP+IP ASASP VVPLME+CWKQ PA RPDGF PVV+ L VV R GDPR+H++ A DV +SPG + G S P T + SPL TE++ P +VQ
Sbjct: 419 SFGVVCYEVATRMEPFRGMMPVQVMRAVADMGSRPEIPAGASASPDVVPLMERCWKQDPAQRPDGFMPVVEELGRVVRRVGDPRHHSSAANDVFSSPGAKHGGSGALSVAASTEPLTAGGDLRVSPLSMTTEQKPMAATAPAPERSVQ 566
BLAST of mRNA_Ecto-sp13_S_contig14530.3485.1 vs. uniprot
Match: A0A6H5KGQ4_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGQ4_9PHAE) HSP 1 Score: 121 bits (303), Expect = 9.100e-27 Identity = 74/148 (50.00%), Postives = 90/148 (60.81%), Query Frame = 1
Query: 1 SFGVVCFEVITRTEPFKEMKPTQVIKAVVLNERRPQIPEWASASPHVVPLMEQCWKQVPAHRPDGFGPVVQALASVVSRDGDPRNHNAVAVDVTTSPGTQRSVGPS-SDGVGAAPPTVSDGVEASPL--VTEEEVGTTALPRDSGNVQ 435
SFGVVC+EV TR EPFK M P QV++AV RP+IP SASP VV LMEQCWKQ PA RP+GF PVV+ L VV R GDPR+H++ A DV +S + S G + S G P T + SPL TE++ P +VQ
Sbjct: 365 SFGVVCYEVATRMEPFKGMMPVQVMRAVADMGSRPEIPAGPSASPDVVRLMEQCWKQDPAQRPEGFMPVVEELGRVVGRVGDPRHHSSAANDVFSSTCVKHSGGGALSAASGTEPLTAGGDLAVSPLRTTTEQKPMAATAPAPERSVQ 512 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14530.3485.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig14530.3485.1 >prot_Ecto-sp13_S_contig14530.3485.1 ID=prot_Ecto-sp13_S_contig14530.3485.1|Name=mRNA_Ecto-sp13_S_contig14530.3485.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=339bp SFGVVCFEVITRTEPFKEMKPTQVIKAVVLNERRPQIPEWASASPHVVPLback to top mRNA from alignment at Ecto-sp13_S_contig14530:432..2850- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig14530.3485.1 ID=mRNA_Ecto-sp13_S_contig14530.3485.1|Name=mRNA_Ecto-sp13_S_contig14530.3485.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2419bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14530:432..2850- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig14530:432..2850- >mRNA_Ecto-sp13_S_contig14530.3485.1 ID=mRNA_Ecto-sp13_S_contig14530.3485.1|Name=mRNA_Ecto-sp13_S_contig14530.3485.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1017bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14530:432..2850- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |