mRNA_Ecto-sp13_S_contig1448.3445.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1448.3445.1 vs. uniprot
Match: D7G920_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G920_ECTSI) HSP 1 Score: 383 bits (983), Expect = 4.300e-133 Identity = 203/213 (95.31%), Postives = 206/213 (96.71%), Query Frame = 1
Query: 1 QMSTPVPATGGAVASKAHRPLPTTPGDKIVEGERLRDEAQSLLKSDKPKMAAVKFRTVFAYTKGLIPQTSELALYAAATGQQTVIDQKQQVAVRALELSCNEGLATIYFRSGHHEKALGYSEKVLLVEPESAKALFRAGQLNLRLKNIEAAKRCLTRAAKHEPQNVNIRTELRNLTKLAQGEGVEAGTDSATTEEGKESAGHERKCPKSSEEA 639
+MSTPVPATGGA AS A RPLPTTPGDKIVEGERLRDEAQSLLKSDKPK AAVKFRTVFAYTKGLIPQTSELALYAA TGQQTVIDQKQQVAVRALELSCNEGLATIYFRSGHHEKALGYSEKVLL EPESAKALFRAGQLNLRLKNIEAAKRCLTRAAKHEPQNVNIRTELRNLTKLAQGEGVEAGT+SATTEEGKESAG +RKCPKSSEEA
Sbjct: 46 EMSTPVPATGGAAASNARRPLPTTPGDKIVEGERLRDEAQSLLKSDKPKTAAVKFRTVFAYTKGLIPQTSELALYAAVTGQQTVIDQKQQVAVRALELSCNEGLATIYFRSGHHEKALGYSEKVLLAEPESAKALFRAGQLNLRLKNIEAAKRCLTRAAKHEPQNVNIRTELRNLTKLAQGEGVEAGTESATTEEGKESAGDKRKCPKSSEEA 258
BLAST of mRNA_Ecto-sp13_S_contig1448.3445.1 vs. uniprot
Match: A0A067CLC7_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CLC7_SAPPC) HSP 1 Score: 63.9 bits (154), Expect = 5.190e-9 Identity = 43/149 (28.86%), Postives = 68/149 (45.64%), Query Frame = 1
Query: 79 DKIVEGERLRDEAQSLLKSDKPKMAAVKFRTVFAYTKGLIPQTSELALYAAATGQQTVIDQKQQVAVRALELSCNEGLATIYFRSGHHEKALGYSEKVLLVEPESAKALFRAGQLNLRLKNIEAAKRCLTRAAKHEPQNVNIRTELRNL 525
+KI + L+ + +L K + K A K+ VF Y GL ++ Y+ + + ++ L++ A + + +KAL EKVL +EPE KALFR GQ AK L +A EP+N +R EL+ +
Sbjct: 24 EKIEQANLLKTQGNTLFKGGEYKKAIHKYSAVFLYVNGLSVAGDGMSTYSQGNAAMSATAAEGD-EIKQLKIVAYTNTAMSHLKLEAFDKALDVCEKVLAIEPEHVKALFRQGQAYAGKGKYSMAKEILKKALALEPKNAAVRNELKRV 171
BLAST of mRNA_Ecto-sp13_S_contig1448.3445.1 vs. uniprot
Match: FKB35_PLAF7 (Peptidyl-prolyl cis-trans isomerase FKBP35 n=23 Tax=Plasmodium (Laverania) TaxID=418107 RepID=FKB35_PLAF7) HSP 1 Score: 59.7 bits (143), Expect = 4.470e-7 Identity = 38/146 (26.03%), Postives = 73/146 (50.00%), Query Frame = 1
Query: 70 TPGDKIVEGERLRDEAQSLLKSDKPKMAAVKFRTVFAYTKGLIPQTSELALYAAATGQQTVIDQKQQVAVRALELSCNEGLATIYFRSGHHEKALGYSEKVLLVEPESAKALFRAGQLNLRLKNIEAAKRCLTRAAKHEPQNVNIR 507
T +K+ +++E K ++ A VK++ + + ++ Q ++D+K+ + E+SCN LAT Y ++ + KA+ ++ KVL ++ + KAL++ G N+ +E AK L +AA P N++IR
Sbjct: 136 TDEEKVQSAFDIKEEGNEFFKKNEINEAIVKYK-----------EALDFFIHTEEWDDQILLDKKKNI-----EISCNLNLATCYNKNKDYPKAIDHASKVLKIDKNNVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNLDIR 265
BLAST of mRNA_Ecto-sp13_S_contig1448.3445.1 vs. uniprot
Match: A0A1S8VX53_9FUNG (Uncharacterized protein n=2 Tax=Batrachochytrium salamandrivorans TaxID=1357716 RepID=A0A1S8VX53_9FUNG) HSP 1 Score: 55.5 bits (132), Expect = 4.150e-6 Identity = 35/146 (23.97%), Postives = 71/146 (48.63%), Query Frame = 1
Query: 79 DKIVEGERLRDEAQSLLKSDKPKMAAVKFRTVFAYTKGLIPQTSELALYAAATGQQTVIDQKQQVAVRALELSCNEGLATIYFRSGHHEKALGYSEKVLLVEPESAKALFRAGQLNLRLKNIEAAKRCLTRAAKHEPQNVNIRTEL 516
+ G+ RD K K A ++ T + GL S +A + A G + + +++ + +C+ +A Y + +++KA+ + +KVL V+ ++AKA++R G ++ ++E A L AA+ P + IR ++
Sbjct: 7 NNFATGKTHRDTGNQFFKDGLVKEALKEYNTALLFLNGL--DNSAMAAFVAQ-GSISPLTPEEKGEITNTVKACHANMAACYLKQENYKKAIDFCDKVLKVDTDNAKAMYRKGLALFKMNDLEPALASLMAAARLSPNDTMIREQI 149
BLAST of mRNA_Ecto-sp13_S_contig1448.3445.1 vs. uniprot
Match: A0A553PCN4_TIGCA (PPIase cyclophilin-type domain-containing protein n=1 Tax=Tigriopus californicus TaxID=6832 RepID=A0A553PCN4_TIGCA) HSP 1 Score: 55.8 bits (133), Expect = 1.180e-5 Identity = 31/95 (32.63%), Postives = 54/95 (56.84%), Query Frame = 1
Query: 256 DQKQQVAVRALELSCNEGLATIYFRSGHHEKALGYSEKVLLVEPESAKALFRAGQLNLRLKNIEAAKRCLTRAAKHEPQNVNIRTELRNLTKLAQ 540
++ Q+ +R +E+ C +A + ++ E A EKVL ++P++AKALFR GQ +K+ + A + L RA + EP + + EL + K+ Q
Sbjct: 298 NEDQETQIRGIEVPCCLNIAAVSIKAKKFEVAKTECEKVLEIQPDNAKALFRRGQAQFGMKDYDLAIQDLMRAKELEPNDKGVANELVKVKKVKQ 392
BLAST of mRNA_Ecto-sp13_S_contig1448.3445.1 vs. uniprot
Match: A0A0D9QKP3_PLAFR (Uncharacterized protein n=1 Tax=Plasmodium fragile TaxID=5857 RepID=A0A0D9QKP3_PLAFR) HSP 1 Score: 53.1 bits (126), Expect = 1.450e-5 Identity = 27/74 (36.49%), Postives = 43/74 (58.11%), Query Frame = 1
Query: 286 LELSCNEGLATIYFRSGHHEKALGYSEKVLLVEPESAKALFRAGQLNLRLKNIEAAKRCLTRAAKHEPQNVNIR 507
+E+SCN L+T Y ++ A+ ++ KVL +E + KAL++ G N+ +E A+ L +AA P NV IR
Sbjct: 21 IEISCNLNLSTCYNKNKDFPNAIAHASKVLKIEKNNVKALYKLGVANMHFGFLEVARENLYKAASLSPNNVEIR 94
BLAST of mRNA_Ecto-sp13_S_contig1448.3445.1 vs. uniprot
Match: A0A1A8X228_9APIC (Peptidylprolyl isomerase n=4 Tax=Plasmodium ovale TaxID=36330 RepID=A0A1A8X228_9APIC) HSP 1 Score: 55.1 bits (131), Expect = 1.740e-5 Identity = 40/146 (27.40%), Postives = 73/146 (50.00%), Query Frame = 1
Query: 70 TPGDKIVEGERLRDEAQSLLKSDKPKMAAVKFRTVFAYTKGLIPQTSELALYAAATGQQTVIDQKQQVAVRALELSCNEGLATIYFRSGHHEKALGYSEKVLLVEPESAKALFRAGQLNLRLKNIEAAKRCLTRAAKHEPQNVNIR 507
T +KI L++E L K D+ A K++ + T EL ++ ++++K+ + E+ CN L+T Y ++ + A+ ++ KVL ++ + KAL++ G N+ +E AK L +AA P+NV+IR
Sbjct: 136 TDEEKIQAAYDLKEEGNELFKKDEINEAISKYKEALDF----FIHTEEL--------EEVLLEKKKNI-----EIMCNLNLSTCYNKNKDYPNAIEHASKVLKLDKNNIKALYKLGVANMHFGFLEDAKDNLYKAASLNPKNVDIR 264
BLAST of mRNA_Ecto-sp13_S_contig1448.3445.1 vs. uniprot
Match: A0A8J4F401_9CHLO (PPIase cyclophilin-type domain-containing protein n=1 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4F401_9CHLO) HSP 1 Score: 53.1 bits (126), Expect = 9.200e-5 Identity = 45/145 (31.03%), Postives = 67/145 (46.21%), Query Frame = 1
Query: 82 KIVEGERLRDEAQSLLKSDKPKMAAVKFRTVFAYTKGLIPQTSELALYAAATGQQTVIDQKQQVAVRALELSCNEGLATIYFRSGHHEKALGYSEKVLLVEPESAKALFRAGQLNLRLKNIEAAKRCLTRAAKHEPQNVNIRTEL 516
++ GE++R E L K K A ++ + Y + AA T ++Q+ A++ +SC A R G E AL +E VL P++ KALFRAGQ + LKN + A L RA++ P + I EL
Sbjct: 216 RLRAGEQIRVEGNELFKDGKFGEAVQRYSSALRYVG-----QDNFSDPAAVT-------EEQKTALQQAVISCLLNRAACRVRLGKPEAALADAEAVLEQAPDNVKALFRAGQAKIALKNYKDALVDLKRASELAPSDTGIAGEL 348 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1448.3445.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1448.3445.1 >prot_Ecto-sp13_S_contig1448.3445.1 ID=prot_Ecto-sp13_S_contig1448.3445.1|Name=mRNA_Ecto-sp13_S_contig1448.3445.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=213bp MSTPVPATGGAVASKAHRPLPTTPGDKIVEGERLRDEAQSLLKSDKPKMAback to top mRNA from alignment at Ecto-sp13_S_contig1448:2123..3935+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1448.3445.1 ID=mRNA_Ecto-sp13_S_contig1448.3445.1|Name=mRNA_Ecto-sp13_S_contig1448.3445.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1813bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1448:2123..3935+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1448:2123..3935+ >mRNA_Ecto-sp13_S_contig1448.3445.1 ID=mRNA_Ecto-sp13_S_contig1448.3445.1|Name=mRNA_Ecto-sp13_S_contig1448.3445.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=639bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1448:2123..3935+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |