mRNA_Ecto-sp13_S_contig14428.3404.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig14428.3404.1 vs. uniprot
Match: D8LK83_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK83_ECTSI) HSP 1 Score: 352 bits (902), Expect = 1.320e-116 Identity = 165/192 (85.94%), Postives = 175/192 (91.15%), Query Frame = 2
Query: 2 DTPWAGNPGDLFKFSMELEPFTFVPTPAFRGDRISVDDYSLIPGQFLSTAPVVDSANLEVTEIGHLILRRGDIPAYPTDHEPLWAHRVTGSVGGTANGGLGCALEAWWERAMNGGEDIGVPVHLVVKNGRWRVGRGWMCTLGRSPRVAGGWRVHLPRDSHGKALKAASLQLRNNSVMMSKEDGHMLWSSSPS 577
DTP AGNPGD FKFSMEL PFTF PTPAFRGD ISVDDY LIPGQFLSTAPVV+SANLEVTE+G LILR+GDIPAYPTDH+PLWAHRVTGSVGGTAN LGCALE WW+RA NGGED+GVPVHL VKNGRWRVGRGWMCTLGRSPRVAGGWRVHLP DSHGKALKAASLQL + S +M+ EDGH+LWSSSPS
Sbjct: 88 DTPRAGNPGDSFKFSMELGPFTFAPTPAFRGDSISVDDYPLIPGQFLSTAPVVNSANLEVTEVGDLILRQGDIPAYPTDHKPLWAHRVTGSVGGTANWRLGCALEVWWDRATNGGEDMGVPVHLAVKNGRWRVGRGWMCTLGRSPRVAGGWRVHLPWDSHGKALKAASLQLCDGSAVMATEDGHILWSSSPS 279
BLAST of mRNA_Ecto-sp13_S_contig14428.3404.1 vs. uniprot
Match: A0A6H5JC81_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC81_9PHAE) HSP 1 Score: 345 bits (884), Expect = 6.970e-114 Identity = 161/192 (83.85%), Postives = 174/192 (90.62%), Query Frame = 2
Query: 2 DTPWAGNPGDLFKFSMELEPFTFVPTPAFRGDRISVDDYSLIPGQFLSTAPVVDSANLEVTEIGHLILRRGDIPAYPTDHEPLWAHRVTGSVGGTANGGLGCALEAWWERAMNGGEDIGVPVHLVVKNGRWRVGRGWMCTLGRSPRVAGGWRVHLPRDSHGKALKAASLQLRNNSVMMSKEDGHMLWSSSPS 577
DTP AGNPGD FKFS+EL PFTF PTPAFRGD ISVDDY LIPGQFLSTAPVVDSANLEVTE+G +ILR+GDIPAYPT+ +PLWAHR TGSVGGTA GGLGCA+EAWWERA NGG+D+ VPVHL VKNGRWRVGRGWMCTLGRSPRVAGGWRVHLP DSHGKALKAASLQLR+ S +M+ EDGH+LWSSS S
Sbjct: 88 DTPRAGNPGDSFKFSIELGPFTFAPTPAFRGDSISVDDYPLIPGQFLSTAPVVDSANLEVTEVGDVILRQGDIPAYPTNPKPLWAHRATGSVGGTAKGGLGCAVEAWWERATNGGQDMRVPVHLAVKNGRWRVGRGWMCTLGRSPRVAGGWRVHLPWDSHGKALKAASLQLRDGSAVMATEDGHILWSSSSS 279
BLAST of mRNA_Ecto-sp13_S_contig14428.3404.1 vs. uniprot
Match: A0A6H5KV41_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV41_9PHAE) HSP 1 Score: 348 bits (893), Expect = 1.140e-110 Identity = 163/192 (84.90%), Postives = 175/192 (91.15%), Query Frame = 2
Query: 2 DTPWAGNPGDLFKFSMELEPFTFVPTPAFRGDRISVDDYSLIPGQFLSTAPVVDSANLEVTEIGHLILRRGDIPAYPTDHEPLWAHRVTGSVGGTANGGLGCALEAWWERAMNGGEDIGVPVHLVVKNGRWRVGRGWMCTLGRSPRVAGGWRVHLPRDSHGKALKAASLQLRNNSVMMSKEDGHMLWSSSPS 577
DTP AG+ G+ FKFSMEL PFTF PTPAFRGD ISVDDY LIPGQFLSTAPVVDSANLE+TE+G LILR+GDIPAYPTD PLWAHRVTGSVGGTANGGLGCA+EAWWERA NGG+D+GVPVHL VKNGRWRVGRGWMCTLG+SPR GGWRVHLP DSHGKALKAASLQLRN SV+M+ EDGH+LWSSSPS
Sbjct: 424 DTPRAGDLGNSFKFSMELGPFTFAPTPAFRGDSISVDDYPLIPGQFLSTAPVVDSANLELTEVGDLILRQGDIPAYPTDDTPLWAHRVTGSVGGTANGGLGCAVEAWWERATNGGQDMGVPVHLAVKNGRWRVGRGWMCTLGQSPRPVGGWRVHLPWDSHGKALKAASLQLRNGSVVMATEDGHILWSSSPS 615
BLAST of mRNA_Ecto-sp13_S_contig14428.3404.1 vs. uniprot
Match: D8LK90_ECTSI (PH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK90_ECTSI) HSP 1 Score: 332 bits (852), Expect = 1.630e-108 Identity = 157/192 (81.77%), Postives = 167/192 (86.98%), Query Frame = 2
Query: 2 DTPWAGNPGDLFKFSMELEPFTFVPTPAFRGDRISVDDYSLIPGQFLSTAPVVDSANLEVTEIGHLILRRGDIPAYPTDHEPLWAHRVTGSVGGTANGGLGCALEAWWERAMNGGEDIGVPVHLVVKNGRWRVGRGWMCTLGRSPRVAGGWRVHLPRDSHGKALKAASLQLRNNSVMMSKEDGHMLWSSSPS 577
DTP AGNPGD FKFSMEL PFTF PTPAFRGD ISVDDY LIPGQ LSTAPVVDSANLEVTE+G L+LRRGDIPAYP+DH+PLWAHRVTGSVGGTAN LGCALE WW RA NGGE +GVPVHLVVKNGRWRVGRGWMCTLGR P VAGGWRVHLP DSHGK LKAA LQL + SV+M+ +G + WSSSPS
Sbjct: 124 DTPRAGNPGDSFKFSMELGPFTFAPTPAFRGDSISVDDYPLIPGQILSTAPVVDSANLEVTEVGDLVLRRGDIPAYPSDHKPLWAHRVTGSVGGTANWRLGCALEVWWHRATNGGEGMGVPVHLVVKNGRWRVGRGWMCTLGRIPSVAGGWRVHLPWDSHGKTLKAALLQLCDGSVVMATGEGDVAWSSSPS 315
BLAST of mRNA_Ecto-sp13_S_contig14428.3404.1 vs. uniprot
Match: D8LKF2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKF2_ECTSI) HSP 1 Score: 347 bits (889), Expect = 2.120e-107 Identity = 162/192 (84.38%), Postives = 176/192 (91.67%), Query Frame = 2
Query: 2 DTPWAGNPGDLFKFSMELEPFTFVPTPAFRGDRISVDDYSLIPGQFLSTAPVVDSANLEVTEIGHLILRRGDIPAYPTDHEPLWAHRVTGSVGGTANGGLGCALEAWWERAMNGGEDIGVPVHLVVKNGRWRVGRGWMCTLGRSPRVAGGWRVHLPRDSHGKALKAASLQLRNNSVMMSKEDGHMLWSSSPS 577
DTP AG+ GD FKFSMEL PFTF PTPAFRGD IS+DDY LIPGQFLSTAPVV+SANLEVTE+G LILR+GDIPAYPT+ PLWAHRVTGSVG TANGGLGCA+EAWWERA NGGED+G+PVHL VKNGRWRVGRGWMCTLGRSPRVAGGWRVHLP DSHGKALKAASLQ+R+ SV+M+ EDGH+LWSSSPS
Sbjct: 674 DTPRAGDLGDSFKFSMELGPFTFAPTPAFRGDSISIDDYPLIPGQFLSTAPVVNSANLEVTEVGDLILRQGDIPAYPTNDTPLWAHRVTGSVGYTANGGLGCAVEAWWERATNGGEDMGIPVHLAVKNGRWRVGRGWMCTLGRSPRVAGGWRVHLPWDSHGKALKAASLQVRDGSVVMATEDGHILWSSSPS 865
BLAST of mRNA_Ecto-sp13_S_contig14428.3404.1 vs. uniprot
Match: D8LKF0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKF0_ECTSI) HSP 1 Score: 299 bits (766), Expect = 7.540e-97 Identity = 147/192 (76.56%), Postives = 159/192 (82.81%), Query Frame = 2
Query: 2 DTPWAGNPGDLFKFSMELEPFTFVPTPAFRGDRISVDDYSLIPGQFLSTAPVVDSANLEVTEIGHLILRRGDIPAYPTDHEPLWAHRVTGSVGGTANGGLGCALEAWWERAMNGGEDIGVPVHLVVKNGRWRVGRGWMCTLGRSPRVAGGWRVHLPRDSHGKALKAASLQLRNNSVMMSKEDGHMLWSSSPS 577
DTP A + G FKFSMEL PFTF PTP FRG+ ISVDDY LIPGQFLS APVV+SANLEVTE+ LILR+GDIPAYPT H L R G + NGGLGCA+EAWWERA NGGED+GVPVHL KNGRWRVGRGWMCTLGRSPRVAGGW+VHLP DSHGKALKAASLQL + SV+MS EDGH+LWSSSPS
Sbjct: 36 DTPRADDLGGSFKFSMELGPFTFAPTPTFRGNSISVDDYPLIPGQFLSAAPVVNSANLEVTEVRDLILRQGDIPAYPTGHT-LGTPRYGVGRGYSTNGGLGCAVEAWWERATNGGEDMGVPVHLAEKNGRWRVGRGWMCTLGRSPRVAGGWKVHLPWDSHGKALKAASLQLGDGSVVMSTEDGHILWSSSPS 226
BLAST of mRNA_Ecto-sp13_S_contig14428.3404.1 vs. uniprot
Match: D8LKF8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKF8_ECTSI) HSP 1 Score: 311 bits (797), Expect = 1.220e-90 Identity = 147/170 (86.47%), Postives = 155/170 (91.18%), Query Frame = 2
Query: 2 DTPWAGNPGDLFKFSMELEPFTFVPTPAFRGDRISVDDYSLIPGQFLSTAPVVDSANLEVTEIGHLILRRGDIPAYPTDHEPLWAHRVTGSVGGTANGGLGCALEAWWERAMNGGEDIGVPVHLVVKNGRWRVGRGWMCTLGRSPRVAGGWRVHLPRDSHGKALKAASLQ 511
DTP AG+ GD FKFS EL PFTF PTPAFRGD ISVDDY LIPGQFLSTAPVV+SANLEVTE+G LILR+GDIPAYPT+ PLWAHRVTGSVG TA+GGLGCALEAWWERA NGGED+G+PVHL VKNGRWRVGRGWMCTLGRSPRVAGGWRVHLP DSHGKALKAASLQ
Sbjct: 1720 DTPRAGDLGDSFKFSTELGPFTFAPTPAFRGDSISVDDYPLIPGQFLSTAPVVNSANLEVTEVGDLILRQGDIPAYPTNDTPLWAHRVTGSVGYTASGGLGCALEAWWERATNGGEDMGIPVHLAVKNGRWRVGRGWMCTLGRSPRVAGGWRVHLPWDSHGKALKAASLQ 1889
BLAST of mRNA_Ecto-sp13_S_contig14428.3404.1 vs. uniprot
Match: A0A6H5JM55_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM55_9PHAE) HSP 1 Score: 214 bits (545), Expect = 1.390e-62 Identity = 98/123 (79.67%), Postives = 108/123 (87.80%), Query Frame = 2
Query: 209 RGDIPAYPTDHEPLWAHRVTGSVGGTANGGLGCALEAWWERAMNGGEDIGVPVHLVVKNGRWRVGRGWMCTLGRSPRVAGGWRVHLPRDSHGKALKAASLQLRNNSVMMSKEDGHMLWSSSPS 577
+GDIPAYPTD+ PLWA+R TGSVGGTANGGLGCA+E WWERA NGG D+GV VHL +KN RWRVGRG MCTLG+SPR AGGWRVHLP DSHGK LKAASLQLR+ SV+MS ED H+LWSSSPS
Sbjct: 185 QGDIPAYPTDNTPLWAYRPTGSVGGTANGGLGCAVEGWWERATNGGRDMGVLVHLAMKNSRWRVGRGRMCTLGQSPRPAGGWRVHLPWDSHGKTLKAASLQLRDGSVVMSTEDAHILWSSSPS 307
BLAST of mRNA_Ecto-sp13_S_contig14428.3404.1 vs. uniprot
Match: D8LQD2_ECTSI (PH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQD2_ECTSI) HSP 1 Score: 212 bits (540), Expect = 1.300e-61 Identity = 103/188 (54.79%), Postives = 133/188 (70.74%), Query Frame = 2
Query: 8 PWAGNPGDLFKFSMELEPFTFVPTPAFRGDRISVDDYSLIPGQFLSTAPVVDSANLEVTEIGHLILRRGDIPAYPTDHEPLWAHRVTGSVGGTANGGLGCALEAWWERAMNGGEDIGVPVHLVVKNGRWRVGRGWMCTLGRSPRVAGGWRVHLPRDSHGKALKAASLQLRNNSVMMSKEDGHMLWSSS 571
P A N GD S +LEP T +PAFRG +S DY L GQFLSTA +VDS N+E+TEIG +I+R GDIPA+ D PLWA+R TGS G A+GGLGC LE+WW R + G +D +PVHL VKNGRWRVGRG +CT+G+SP+ G WR +LP D+ G+A+K A L+LR+ ++++ G LWSS+
Sbjct: 128 PLAQNLGDSSVTSSKLEPDTPDASPAFRGHVMSPGDYPLQTGQFLSTASLVDSTNVEITEIGDVIVRAGDIPAFSGDKPPLWAYRATGSTGDKADGGLGCVLESWWRRMVKGTDDD-IPVHLYVKNGRWRVGRGRLCTMGQSPKPHGSWRANLPWDAKGRAIKTAGLELRDGALVLVTPQGETLWSSA 314
BLAST of mRNA_Ecto-sp13_S_contig14428.3404.1 vs. uniprot
Match: D8LQD9_ECTSI (PH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQD9_ECTSI) HSP 1 Score: 213 bits (543), Expect = 1.880e-60 Identity = 103/188 (54.79%), Postives = 133/188 (70.74%), Query Frame = 2
Query: 8 PWAGNPGDLFKFSMELEPFTFVPTPAFRGDRISVDDYSLIPGQFLSTAPVVDSANLEVTEIGHLILRRGDIPAYPTDHEPLWAHRVTGSVGGTANGGLGCALEAWWERAMNGGEDIGVPVHLVVKNGRWRVGRGWMCTLGRSPRVAGGWRVHLPRDSHGKALKAASLQLRNNSVMMSKEDGHMLWSSS 571
P A N GD S +L P T +PAFRG ++ DY L GQFLSTAP+VDS N+E+TEIG +ILR GDIPA+ D PLWA+R TGS G A+GGLGC LE+WW R + G D +PVHL VKNGRWRVGRG +CT+G+SP+ G WR +LP D+ G+A+K A L+LR+ ++++ G +LWSS+
Sbjct: 268 PLAQNLGDSSVTSSKLGPDTPEVSPAFRGQSMAPGDYPLQTGQFLSTAPLVDSTNVEITEIGDVILRAGDIPAFSGDKSPLWAYRATGSTGDKADGGLGCVLESWWRRMVKGTYDD-IPVHLYVKNGRWRVGRGRLCTMGQSPKPHGSWRANLPWDAKGRAIKTAGLELRDGALVLVTPQGEILWSSA 454 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14428.3404.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig14428.3404.1 >prot_Ecto-sp13_S_contig14428.3404.1 ID=prot_Ecto-sp13_S_contig14428.3404.1|Name=mRNA_Ecto-sp13_S_contig14428.3404.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=179bp MELEPFTFVPTPAFRGDRISVDDYSLIPGQFLSTAPVVDSANLEVTEIGHback to top mRNA from alignment at Ecto-sp13_S_contig14428:792..2152+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig14428.3404.1 ID=mRNA_Ecto-sp13_S_contig14428.3404.1|Name=mRNA_Ecto-sp13_S_contig14428.3404.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1361bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14428:792..2152+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig14428:792..2152+ >mRNA_Ecto-sp13_S_contig14428.3404.1 ID=mRNA_Ecto-sp13_S_contig14428.3404.1|Name=mRNA_Ecto-sp13_S_contig14428.3404.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=537bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14428:792..2152+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |