mRNA_Ecto-sp13_S_contig144.3383.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig144.3383.1 vs. uniprot
Match: D7G4E2_ECTSI (Nucleotid_trans domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4E2_ECTSI) HSP 1 Score: 426 bits (1096), Expect = 8.400e-150 Identity = 212/249 (85.14%), Postives = 225/249 (90.36%), Query Frame = 1
Query: 1 MGFLNSFAGMAAIAMVTHSHATTAKNVSLDLLPSVPLPVISPEAVCADWTAWVPPQSGPTVVMQVEAGHDVIMSDADALWLADPMEDFSLPGVVDSSIVASRGRFPTDVGQVWGATMCMGFIFFRATASRVAMREFVTVMNALVLERKDDQIAVNIAARDLGIMWKQKDSDMRYEESTGFGVGYIDSLSDEHNRPFTVTLLPHSAYTRICASTPVSNTTVVAHCRSSKTPEGKISWMHSMDLWVVDKDT 747
MGF NSFAGMAA+A+VT S ATTAKNVSLDLLP PLP ISPEAVCADW AWVPP SGPTVVMQVEAGHDV+MSDADALWLADPM+DFSLPGVV SSIVASRG FP +VG VWGAT+CMGFI FR TASRVAMREFVTVMNALVLE KDDQIAVNIAARDLGI+W Q+DSDMRY ESTGFGVG+IDSLSD+ N+PFTVTLLPHSAYTRICASTPVSNTTVVAHC SSKTP+ K WMH MDLW VD+DT
Sbjct: 1 MGFCNSFAGMAAMAIVTSS-ATTAKNVSLDLLPLEPLPAISPEAVCADWAAWVPPMSGPTVVMQVEAGHDVMMSDADALWLADPMKDFSLPGVVGSSIVASRGSFPGEVGHVWGATICMGFILFRTTASRVAMREFVTVMNALVLEEKDDQIAVNIAARDLGIVWNQEDSDMRYTESTGFGVGFIDSLSDDDNQPFTVTLLPHSAYTRICASTPVSNTTVVAHCISSKTPQSKADWMHRMDLWAVDEDT 248
BLAST of mRNA_Ecto-sp13_S_contig144.3383.1 vs. uniprot
Match: A0A6H5LI82_9PHAE (Nucleotid_trans domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LI82_9PHAE) HSP 1 Score: 242 bits (617), Expect = 5.370e-76 Identity = 118/185 (63.78%), Postives = 144/185 (77.84%), Query Frame = 1
Query: 193 VEAGHDVIMSDADALWLADPMEDFSLPGVVDSSIVASRGRFPTDVGQVWGATMCMGFIFFRATASRVAMREFVTVMNALVLERKDDQIAVNIAARDLGIMWKQKDSDMRYEESTGFGVGYIDSLSDEHNRPFTVTLLPHSAYTRICASTPVSNTTVVAHCRSSKTPEGKISWMHSMDLWVVDKDT 747
VEAG DVIMSDADALWL DP +DF+LP V+DSS+VASRG+FP +G WGATMCMGF+ FRAT RV + EF+ VM+ALV + KDDQI+VN+AA +LGI+W Q+ SDMRY ES FG G ID+L DE+N+PF+VTLLPH+AYTR+C TP+SN TVVAHC + KT + K WM LW D +T
Sbjct: 137 VEAGQDVIMSDADALWLDDPFKDFNLPRVIDSSVVASRGKFPKPLGLEWGATMCMGFVLFRATGRRV-VGEFLEVMDALVHKNKDDQISVNLAAENLGIVWDQE-SDMRYVESDSFGFGTIDTLVDENNQPFSVTLLPHNAYTRVCDETPISNKTVVAHCWAPKTADSKTGWMVQSKLWFSDNET 319
BLAST of mRNA_Ecto-sp13_S_contig144.3383.1 vs. uniprot
Match: D8LK17_ECTSI (Nucleotid_trans domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK17_ECTSI) HSP 1 Score: 172 bits (436), Expect = 1.550e-48 Identity = 106/216 (49.07%), Postives = 128/216 (59.26%), Query Frame = 1
Query: 193 VEAGH-DVIMSDADALWLADPMED-FSLPGVVDSSIVASRGRFPTDVGQVWGATMCMGFIFFRATASRVAMREFVTVMNALVLERKDDQIAVNIAARDLGIMWKQKDSDMRYEESTGFGVGYIDSLSDEHNR----------------------------PFTVTLLPHSAYTRICASTPVSN-TTVVAHCRSSKTPEG-KISWMHSMDLWVVDKD 744
+E G+ DVIMSDADALWLADP +D FS IVASRG +P D + WG+T+CMGFI FRA + M+ F+ VM LV++ KDDQI+VN AA+ LGI+W K+SDMRYEESTG+G G I L +N PF VTLLPHSAYTR+C +SN TTVVAHC + G K SWM +LW V D
Sbjct: 129 LEIGNVDVIMSDADALWLADPAKDLFSRGDGGRGDIVASRGSWPNDQWKEWGSTLCMGFILFRAR-NVAGMKRFLDVMADLVVQNKDDQISVNRAAKQLGIVW-DKNSDMRYEESTGYGRGIIAGLGTSNNSTSGGGGDLFIGQTGHGVVVGRGTREVEAPFRVTLLPHSAYTRLCGRRTLSNQTTVVAHCYFPQKEAGVKTSWMKKANLWSVQDD 342
BLAST of mRNA_Ecto-sp13_S_contig144.3383.1 vs. uniprot
Match: A0A6H5KMQ8_9PHAE (Nucleotid_trans domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMQ8_9PHAE) HSP 1 Score: 167 bits (423), Expect = 1.510e-46 Identity = 90/184 (48.91%), Postives = 116/184 (63.04%), Query Frame = 1
Query: 193 VEAGHDVIMSDADALWLADPMEDFSLPGVVDSSIVASRGRFPTDVGQVWGATMCMGFIFFRATASRVAMREFVTVMNALVLERKDDQIAVNIAARDLGIMWKQKDSDMRYEESTGFGVGYIDSLSDEHNRPFTVTLLPHSAYTRICASTPVSNTTVVAHCRSSKTPEGKISWMHSMDLWVVDKD 744
+ AG DV+MSDADA+WL DP DF+ +DS++VASR P + WGAT+CMGF FFRA S AM+ F+TV+ +V E DDQ AVN A LG++W SDM + ST G G I++++ + P VTLLPH+ YTR C TP+SN T+VAHC SS EG +WM LW + D
Sbjct: 163 LNAGQDVLMSDADAIWLRDPTNDFASDLNMDSNVVASRAVMPFPLYHKWGATVCMGFAFFRAGGS--AMQAFMTVVGEIVNELGDDQKAVNEALDKLGVVWDPT-SDMDFTNSTRPGTGVIENIT-ANGDPLKVTLLPHNKYTRSCRRTPISNDTIVAHCVSSDKGEGMATWMKEAHLWNLPDD 342
BLAST of mRNA_Ecto-sp13_S_contig144.3383.1 vs. uniprot
Match: D8LSV3_ECTSI (Nucleotid_trans domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSV3_ECTSI) HSP 1 Score: 166 bits (419), Expect = 2.080e-45 Identity = 88/187 (47.06%), Postives = 120/187 (64.17%), Query Frame = 1
Query: 184 VMQVEAGHDVIMSDADALWLADPMEDFSLPGVVDSSIVASRGRFPTDVGQVWGATMCMGFIFFRATASRVAMREFVTVMNALVLERKDDQIAVNIAARDLGIMWKQKDSDMRYEESTGFGVGYIDSLSDEHNRPFTVTLLPHSAYTRICASTPVSNTTVVAHCRSSKTPEGKISWMHSMDLWVVDKD 744
V ++AG DV+MSDADA+WL DPM+DF DSSIVASRG P + + WGAT+CMGF+ FRA ++ A+ +F+ V+ E ++DQ AVN+A + L ++W SDM + +ST GVG ++S+ + TV+LLPH+ YTR C TP+S TVVAHC S+ EG +WM LW V D
Sbjct: 218 VCLLKAGIDVLMSDADAVWLHDPMDDFDSDDYRDSSIVASRGAMPVPLFRTWGATICMGFVLFRAGSN--AIYQFMEVVGEFTEELENDQQAVNLALQKLDVVWDPT-SDMSFSDSTRSGVGVVNSIYSGES--LTVSLLPHNKYTRSCRRTPISVETVVAHCISTDKGEGMATWMKEAHLWNVPDD 399
BLAST of mRNA_Ecto-sp13_S_contig144.3383.1 vs. uniprot
Match: D7FQM0_ECTSI (Nucleotid_trans domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQM0_ECTSI) HSP 1 Score: 154 bits (390), Expect = 6.630e-44 Identity = 74/89 (83.15%), Postives = 82/89 (92.13%), Query Frame = 1
Query: 196 EAGHDVIMSDADALWLADPMEDFSLPGVVDSSIVASRGRFPTDVGQVWGATMCMGFIFFRATASRVAMREFVTVMNALVLERKDDQIAV 462
EAGHDVIMSDADALWLADPM+DFSLPGV+DSSIVASRG+ P +VG+VWGATMCMGFI FRATA+R AM +FVTVMNALV E +DDQIAV
Sbjct: 60 EAGHDVIMSDADALWLADPMKDFSLPGVIDSSIVASRGKKPKEVGKVWGATMCMGFILFRATANRTAMGKFVTVMNALVFESEDDQIAV 148
BLAST of mRNA_Ecto-sp13_S_contig144.3383.1 vs. uniprot
Match: D7FGV6_ECTSI (Acetyltransferase (Isoleucine patch superfamily protein) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGV6_ECTSI) HSP 1 Score: 162 bits (410), Expect = 6.650e-44 Identity = 85/184 (46.20%), Postives = 115/184 (62.50%), Query Frame = 1
Query: 193 VEAGHDVIMSDADALWLADPMEDFSLPGVVDSSIVASRGRFPTDVGQVWGATMCMGFIFFRATASRVAMREFVTVMNALVLERKDDQIAVNIAARDLGIMWKQKDSDMRYEESTGFGVGYIDSLSDEHNRPFTVTLLPHSAYTRICASTPVSNTTVVAHCRSSKTPEGKISWMHSMDLWVVDKD 744
+ AG DV+MSDADA+WL DP +D + +DS++VASR P + WGAT+CMGF FFRA S AM+ F+TV+ + E +DQIAVN A L ++W SDM + ++T G G I++++ + VTLLPH+ YTR C TP+SN T+VAHC SS EG +WM LW + D
Sbjct: 238 LNAGQDVLMSDADAIWLRDPTDDLASDAFLDSNVVASRAVMPFPLYHKWGATICMGFAFFRAGGS--AMQAFMTVVEEIANELGNDQIAVNEALNKLDVVWDPM-SDMNFTDNTRPGTGVIENITVDGGS-LKVTLLPHNKYTRSCRRTPISNDTIVAHCVSSDKGEGMATWMKEAHLWNLPDD 417
BLAST of mRNA_Ecto-sp13_S_contig144.3383.1 vs. uniprot
Match: A0A6H5JTX9_9PHAE (Nucleotid_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTX9_9PHAE) HSP 1 Score: 148 bits (373), Expect = 3.640e-39 Identity = 105/269 (39.03%), Postives = 127/269 (47.21%), Query Frame = 1
Query: 193 VEAGH-DVIMSDADALWLADPMED-FSLPGVVDSSIVASRGRFPTDVGQVWGATMCMGFIFFRATASRVAMREFVTVMNALVLERKDDQ-----------------------------------------------------IAVNIAARDLGIMWKQKDSDMRYEESTGFGVGYIDSLSDEHNR----------------------------PFTVTLLPHSAYTRICASTPVSN-TTVVAHCRSSKTPEG-KISWMHSMDLWVVDKD 744
+E GH DVIMSDADALWLADP +D FS G I+ASRG +P + + WG+T+CMGFI FRA + M+ F+ VM LV++ KDDQ I+VN AA+ LGI+W K+SDMRYEESTG+G G I L +N PF V LLPHSAYTR C +SN TTVVAHC + G K SWM +LW V D
Sbjct: 79 LEVGHVDVIMSDADALWLADPAKDLFSRGGGGRGDIIASRGSWPNEQSKEWGSTLCMGFIVFRAR-NVAGMKRFLDVMADLVVQNKDDQMLCECATGVENDFCGFPASSRPRSNPTLTESAFCVAAPSPNASLILSIVSVEKISVNRAAKQLGIVW-DKNSDMRYEESTGYGRGVIAGLGSSNNSTSGGGGDLFIGQTGHGVVVGRGTREVEAPFRVILLPHSAYTRRCGRRTLSNQTTVVAHCYFPQKEAGVKTSWMKKANLWSVQDD 345
BLAST of mRNA_Ecto-sp13_S_contig144.3383.1 vs. uniprot
Match: A0A8J6CCA2_DIALT (Nucleotid_trans domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CCA2_DIALT) HSP 1 Score: 91.3 bits (225), Expect = 7.280e-18 Identity = 61/190 (32.11%), Postives = 92/190 (48.42%), Query Frame = 1
Query: 175 PTVVMQVEAGHDVIMSDADALWLADPMEDFSLPGVVDSSIVASRGRFPTDVGQVWGATMCMGFIFFRATASRVAMREFVTVMNALVLERKDDQIAVNIAARDLGIMWKQKDSDMRYEES--TGFGVGYIDSLSDEHNRPFTVTLLPHSAYTRICASTPVSNTTVVAHCRS-SKTPEGKISWMHSMDLWVV 735
P V V G DV+++D DA+WL DP+ D + I+ SRGR P WGA++CMGFIFFR + V M L ++DQ N + ++W + +R+ +S T FG + + H V +LPH +Y RIC +T ++AHC S K K+ + + +LW +
Sbjct: 119 PYVAHLVHLGRDVLITDVDAIWLGDPLPDIM---ATQAGIIGSRGRSPH---LDWGASLCMGFIFFRGSDPLVR-----AAMPVLTEPMREDQTDFNHNMQRERLVWDE--GRVRFVDSIDTSFGTLRPKNANAGH-AGLRVAMLPHKSYVRICEDKVDYSTVIIAHCHSRGKRAHLKVQSLGAKNLWYI 294
BLAST of mRNA_Ecto-sp13_S_contig144.3383.1 vs. uniprot
Match: A0A7S0SXH7_9STRA (Hypothetical protein (Fragment) n=2 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SXH7_9STRA) HSP 1 Score: 83.2 bits (204), Expect = 2.830e-15 Identity = 52/145 (35.86%), Postives = 79/145 (54.48%), Query Frame = 1
Query: 205 HDVIMSDADALWLADPMEDFSLPGVVDSSIVASRGRFPTDVGQVWGATMCMGFIFFRAT--ASRVAMREFVTVMNALVLERK-DDQIAVNIAARDLGIMWKQKDSDMRYEESTGFGVGYIDSLSDEHNRPFTVTLLPHSAYTRIC 630
DVI++D D+LW+ P+ D S+ SSIV+SR +P ++ VWGAT+CMGFI+F+A + + ++T+ + + RK DDQI N I W K + + I S+S +N +++TLLPH Y R C
Sbjct: 57 QDVILTDLDSLWINSPLNDISIHSA-SSSIVSSRAWWPHELWSVWGATLCMGFIYFKADEFSKYFVNKIYLTMSDNINNYRKVDDQITANEELYKNQIEWFDKPMSVGNN-----AIANIGSIS-YNNMSYSITLLPHYKYIRNC 194 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig144.3383.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 24
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig144.3383.1 >prot_Ecto-sp13_S_contig144.3383.1 ID=prot_Ecto-sp13_S_contig144.3383.1|Name=mRNA_Ecto-sp13_S_contig144.3383.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=251bp MGFLNSFAGMAAIAMVTHSHATTAKNVSLDLLPSVPLPVISPEAVCADWTback to top mRNA from alignment at Ecto-sp13_S_contig144:1749..4326- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig144.3383.1 ID=mRNA_Ecto-sp13_S_contig144.3383.1|Name=mRNA_Ecto-sp13_S_contig144.3383.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2578bp|location=Sequence derived from alignment at Ecto-sp13_S_contig144:1749..4326- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig144:1749..4326- >mRNA_Ecto-sp13_S_contig144.3383.1 ID=mRNA_Ecto-sp13_S_contig144.3383.1|Name=mRNA_Ecto-sp13_S_contig144.3383.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=753bp|location=Sequence derived from alignment at Ecto-sp13_S_contig144:1749..4326- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |