mRNA_Ecto-sp13_S_contig14357.3360.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig14357.3360.1
Unique NamemRNA_Ecto-sp13_S_contig14357.3360.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig14357.3360.1 vs. uniprot
Match: D7G6M4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6M4_ECTSI)

HSP 1 Score: 568 bits (1464), Expect = 1.030e-198
Identity = 286/307 (93.16%), Postives = 290/307 (94.46%), Query Frame = 1
Query:    1 CIEYARGVQHPDNAGALIESIAEKLKAAGMTEVDSRPTARIPIVIFNDEASGLDCDISIMNPLAIRNTHLMKAYSVADPRVKELAYVLKRWAKRRWVNNASEGTLSSYGYLLCLLHFLQTRNPPVVPNLQARRCSFCGRFLRGALPPDWAGEALHGVPRLPVVMTKQPTDGLDCDTYFYDPLTPGRDGERRAAVLREFGSRNTASSGELLAGFFRYFALELDCRTSVVSVRLGGLVDRERKAEACCWSMHTRLSLEDPFETSYDVAHVLKWSRFKHVRMEFARAYALLAGXXXXXDASSLLETICSQ 921
            CIEYARGVQHPD+AGALIESIAEKLKAAGMT+VDSRPTARIPIVIFND ASGLDCDIS+MNPLA+RNT LMKAYSVADPRVKELAYVLKRWAKRRWVNNASEGTLSSYGYLLCLLHFLQTRNPPVVPNLQA             LPPDWAGE LHGVPRLPVVMTKQPTDGLDCDTYFYDPLTPGRDGERRAAVLREFGSRNTASSGELLAGFFRYFALELDCRTSVVSVRLGGL DRERKAEACCWSMHTRLSLEDPFETSYDVAHVLKWSRFKHVRMEFARAYALLAGXXXXXDASSLLETICSQ
Sbjct:  351 CIEYARGVQHPDDAGALIESIAEKLKAAGMTKVDSRPTARIPIVIFNDGASGLDCDISVMNPLAVRNTRLMKAYSVADPRVKELAYVLKRWAKRRWVNNASEGTLSSYGYLLCLLHFLQTRNPPVVPNLQA-------------LPPDWAGEPLHGVPRLPVVMTKQPTDGLDCDTYFYDPLTPGRDGERRAAVLREFGSRNTASSGELLAGFFRYFALELDCRTSVVSVRLGGLADRERKAEACCWSMHTRLSLEDPFETSYDVAHVLKWSRFKHVRMEFARAYALLAGXXXXXDASSLLETICSQ 644          
BLAST of mRNA_Ecto-sp13_S_contig14357.3360.1 vs. uniprot
Match: K8YXG6_NANGC (Nucleotidyltransferase-like protein n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YXG6_NANGC)

HSP 1 Score: 271 bits (694), Expect = 2.780e-85
Identity = 148/320 (46.25%), Postives = 196/320 (61.25%), Query Frame = 1
Query:   37 NAGALIESIAEKLKAAGMTEVDSRPTARIPIVIFNDEASGLDCDISIMNPLAIRNTHLMKAYSVADPRVKELAYVLKRWAKRRWVNNASEGTLSSYGYLLCLLHFLQTRNP------------PVVPNLQARRCSFCGRFLRGALPPDWAG------EALHGVPRLPVVMTKQPTDGLDCDTYFYDPLTPGRDGERRAA--VLREFGSRNTASSGELLAGFFRYFALELDCRTSVVSVRLGGLVDRERKAEACCWSMHTRLSLEDPFETSYDVAHVLKWSRFKHVRMEFARAYAL-----LAGXXXXXDASSLLETICSQ 921
            ++G +IE++A  L+A GM +V +RPTARIPIV+F +  +GLDCDIS+ NPLA+RNT L+  YS  DPRV+ LAY++K WA+ R +NNAS GTLSSY Y+L +LHFLQT               P+VPNLQ              LPPDW G      E + G  +LP  +   P +G+D DTYFY        G+      +LRE+ +RN AS GELL  FF Y++ E D R  V+SVRLGG + +ERKAE   W++++RL++EDPFET Y+V H LK  + +H+R EFARAYAL     +        A  LL  IC +
Sbjct:   76 SSGEMIEALASLLEANGMEDVVARPTARIPIVLFREPGTGLDCDISVENPLALRNTQLLHEYSQVDPRVRALAYIVKHWARARKINNASGGTLSSYAYILMVLHFLQTAAAAVPSTPDTPCYAPLVPNLQL-------------LPPDWKGNEMDRREQMQGQRQLPRQLVTHPLEGMDVDTYFYTEPPSEEQGQPNGQRNLLREYAARNKASVGELLVAFFWYYSWEFDYRDLVLSVRLGGAMKKERKAEEDGWAVNSRLAIEDPFETWYNVTHFLKEGKHRHIRQEFARAYALCVEEAMGEGATEAGAEGLLARICEE 382          
BLAST of mRNA_Ecto-sp13_S_contig14357.3360.1 vs. uniprot
Match: A0A835YMU6_9STRA (WW domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMU6_9STRA)

HSP 1 Score: 289 bits (740), Expect = 3.460e-85
Identity = 175/363 (48.21%), Postives = 209/363 (57.58%), Query Frame = 1
Query:    1 CIEYARGVQHPDNAGALIESIAEKLKAAGMTEVDSRPTARIPIVIFNDEASGLDCDISIMNPLAIRNTHLMKAYSVADPRVKELAYVLKRWAKRRWVNNASEGTLSSYGYLLCLLHFLQTRNPPVVPNLQARRCSFCGRFLRGALPPDWAGEALHGVPR----LPVVMTKQPTDGLDCDTYFYDPLTPGRDGERRAAVLR---------EFGSRNTASSGEL--------------------LAGFFRYFALELDCRTSVVSVRLGGLVDRERKAEACCWSMHTRLSLEDPFETSYDVAHVLKWS-----------------RFKHVRMEFARAYALLAGXXXXX--------DASSLLETIC 915
            C+ Y  G +  + A A+IE++A  L A GM +VD RPTARIPIV+F D A GL+CDIS+MNPLA+RNT L++ Y++ADPRV+ LA+V+K WAK+R +N  SEGTLSSYGYLL LLH+LQTRNPPVVPNLQA             LPPDW G       R    LP   T   +DG  C+TYF+ P   G D  RR A L          +FG  N  S  E+                    LAGFFRY+A ELD RT VVS+R GG + +  KAEA  W  HTRLS+EDPFET YDVAHVLKWS                 R K +  EFARAY LL               DAS LL+T+C
Sbjct: 1468 CLMYPPGNEPAEPASAVIEAVAAALSAQGMEDVDCRPTARIPIVLFKDPAYGLECDISVMNPLAVRNTDLLRTYALADPRVRPLAFVVKHWAKQRQINCPSEGTLSSYGYLLLLLHYLQTRNPPVVPNLQA-------------LPPDWPGPPAAAPTRPGRGLPERSTAHASDGRLCNTYFFVP-PQGSDCLRRFAALNTESYAQSYAQFG--NELSLKEVFVEPSMXXXXXXXXXXXXXXLAGFFRYYAWELDMRTRVVSLRSGGTLPKAGKAEADAWGTHTRLSIEDPFETWYDVAHVLKWSSNLXXXXXXXXXXXXXXRHKLLHTEFARAYTLLCEAAQRTTNPGGGGGDASDLLQTLC 1814          
BLAST of mRNA_Ecto-sp13_S_contig14357.3360.1 vs. uniprot
Match: W7TXG0_9STRA (PAP/25A-associated n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TXG0_9STRA)

HSP 1 Score: 272 bits (695), Expect = 5.260e-81
Identity = 148/320 (46.25%), Postives = 197/320 (61.56%), Query Frame = 1
Query:   37 NAGALIESIAEKLKAAGMTEVDSRPTARIPIVIFNDEASGLDCDISIMNPLAIRNTHLMKAYSVADPRVKELAYVLKRWAKRRWVNNASEGTLSSYGYLLCLLHFLQTRNP------------PVVPNLQARRCSFCGRFLRGALPPDWAG------EALHGVPRLPVVMTKQPTDGLDCDTYFYDPLTPGRDGERRA--AVLREFGSRNTASSGELLAGFFRYFALELDCRTSVVSVRLGGLVDRERKAEACCWSMHTRLSLEDPFETSYDVAHVLKWSRFKHVRMEFARAYAL-----LAGXXXXXDASSLLETICSQ 921
            ++G +IE++A  L+A GM +V +RPTARIPIV+F +  +GLDCDIS+ NPLA+RNT L+  YS  DPRV+ LAY++K WA+ R +NNAS GTLSSY Y+L +LHFLQT               P+VPNLQ              LPPDW G      E + G  +LP  +   P +G+D DTYFY        G+     ++LRE+ +RN AS GELL  FF Y++ E D R  V+SVRLGG + +ERKAE   W++++RL++EDPFET Y+V H LK  + +H+R EFARAYAL     +        A  LL  IC +
Sbjct:  543 SSGEMIEALASLLEANGMEDVVARPTARIPIVLFREPGTGLDCDISVENPLALRNTQLLHEYSRVDPRVRALAYIVKHWARARKINNASGGTLSSYAYILMVLHFLQTAAAAVPSTPDTPCYAPLVPNLQL-------------LPPDWKGNEMDRREQMQGQRQLPRQLVTHPLEGMDVDTYFYTEPPSEEQGQPNGQRSLLREYAARNKASVGELLVAFFWYYSWEFDYRDLVLSVRLGGAMKKERKAEEDGWAVNSRLAIEDPFETWYNVTHFLKEGKHRHIRQEFARAYALCVEEAMGEGATEAGAEGLLARICEE 849          
BLAST of mRNA_Ecto-sp13_S_contig14357.3360.1 vs. uniprot
Match: A0A6V1RBI5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1RBI5_HETAK)

HSP 1 Score: 254 bits (650), Expect = 9.980e-80
Identity = 155/320 (48.44%), Postives = 195/320 (60.94%), Query Frame = 1
Query:    1 CIEYARGVQHPDNAGALIESIAEKLKAAGMTEVDSRPTARIPIVIFNDEASGLDCDISIMNPLAIRNTHLMKAYSVADPRVKELAYVLKRWAKRRWVNNASEGTLSSYGYLLCLLHFLQTR-NPPVVPNLQARRCSFCGRFLRGALPPDWAGEALHGVPR--LPVVMTKQPTDGLDCDTYFYDPLTPGRDGERRAAVLREFGSRNTASSGELLAGFFRYFALELDCRTSVVSVRL---GGLVDRERKAEACCWSMHTRLSLEDPFETSYDVAHVLKWSRFKHVRMEFARAYALLA------GXXXXXDA-SSLLETICSQ 921
            C+ + RGV  P +  +++E  AE L+A GMT+V  RPTARIPIV F D  SGL  D+S+ N LA+ NT L+ AYS  D RV+ LA+V+K WA+RR +N A+EGTLSSYGYLL L+ FLQ R   PV+PNLQA             LPP W      G P   LP V T Q  DG   +TYFY P  PG D    +A+   F  RNT + G+LL  F+ + A  LD R SVVSVR    GG + +E KAEA CW   +RLS+EDPFET YDVAHVLK ++ ++VR EF RAY L+       G     +A  +LL+ IC +
Sbjct:   39 CLVWPRGVPLPADPASVVERTAEALRAEGMTDVACRPTARIPIVSFTDPQSGLQGDVSLQNALALANTALLHAYSRVDARVRALAHVIKHWARRRRMNCAAEGTLSSYGYLLLLIQFLQQRPGAPVLPNLQA-------------LPPGWE----QGGPARPLPTVETPQLADGRPANTYFYTP--PGGD---YSALSAAFARRNTETVGQLLLAFWHHVAHRLDTRKSVVSVRTSSPGGTLPKEYKAEADCWGQPSRLSIEDPFETWYDVAHVLKTTKDQYVRGEFHRAYTLIVQVHGNLGRGMPPEALENLLDEICKE 336          
BLAST of mRNA_Ecto-sp13_S_contig14357.3360.1 vs. uniprot
Match: A0A4D9DCB2_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DCB2_9STRA)

HSP 1 Score: 271 bits (693), Expect = 4.240e-79
Identity = 148/319 (46.39%), Postives = 196/319 (61.44%), Query Frame = 1
Query:   40 AGALIESIAEKLKAAGMTEVDSRPTARIPIVIFNDEASGLDCDISIMNPLAIRNTHLMKAYSVADPRVKELAYVLKRWAKRRWVNNASEGTLSSYGYLLCLLHFLQTR---------NP---PVVPNLQARRCSFCGRFLRGALPPDWAG------EALHGVPRLPVVMTKQPTDGLDCDTYFYDPLTPGRDGERRA--AVLREFGSRNTASSGELLAGFFRYFALELDCRTSVVSVRLGGLVDRERKAEACCWSMHTRLSLEDPFETSYDVAHVLKWSRFKHVRMEFARAYAL-----LAGXXXXXDASSLLETICSQ 921
            +G +IE++A  L+A GM +V +RPTARIPIV+F +  +GLDCDIS+ NPLA+RNT L+  YS  DPRV+ LAY++K WA+ R +NNAS GTLSSY Y+L +LHFLQT          NP   P+VPNLQ              LPPDW G      E + G   LP  +   P +G+D DTYFY        G+     ++LRE+ +RN A  GELL  FF Y++ E D R  V+SVR+GG + +ERKAE   W++++RL++EDPFET Y+V H LK  + +H+R EFARAYAL     +        A  LL  IC +
Sbjct:  973 SGEMIEALASLLEANGMEDVVARPTARIPIVLFREPGTGLDCDISVENPLALRNTQLLHEYSRVDPRVRALAYIVKHWARARKINNASGGTLSSYAYILMVLHFLQTAAAAVSSTPDNPCYAPLVPNLQL-------------LPPDWKGNEMDRREQMQGQRHLPRQLVTHPLEGMDVDTYFYTEAPSEEQGQPNGQRSLLREYAARNKACVGELLVAFFWYYSWEFDYRDLVLSVRMGGAMKKERKAEEDGWAVNSRLAIEDPFETWYNVTHFLKEGKHRHIRQEFARAYALCVEEAMGEGATEAGAEGLLARICEE 1278          
BLAST of mRNA_Ecto-sp13_S_contig14357.3360.1 vs. uniprot
Match: A0A7S2CLX1_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CLX1_9STRA)

HSP 1 Score: 247 bits (630), Expect = 1.790e-74
Identity = 141/307 (45.93%), Postives = 181/307 (58.96%), Query Frame = 1
Query:   31 PDNAGALIESIAEKLKAAGMTE-VDSRPTARIPIVIFNDEASGLDCDISIMNPLAIRNTHLMKAYSVADPRVKELAYVLKRWAKRRWVNNASEGTLSSYGYLLCLLHFLQTRNPPVVPNLQARRCSFCGRFLRGALPPDWAGEALHGVPRLPVVMTKQPTD-GLDCDTYFYDPLTPGRDGERRAAVLREFGSRNTASSGELLAGFFRYFALELDCRTSVVSVRLGGLVDRERKAEACCWSMHT-RLSLEDPFETSYDVAHVLKWSRFKHVRMEFARAYALL-------AGXXXXXDASSLLETICSQ 921
            P +  AL +S+A  L+    TE V++R TARIPIV+F D  SGLDCDISI NPLA+RNT+L+ AY+  DPRVK LA+ +K WA+RR +N+ S+GTLSSYGYLLC++HFLQTR+PPV+PNLQ    S      RG               + P V+   P + G+ CDTYFYD   PG   E      R F  RNT + GELL GFFRYF  E D   + VSVR  G V +  KAE   W ++T RL +EDP E  YDV H ++      +R EF RA+ +L       AG         ++  IC++
Sbjct:  243 PMDPEALCQSVAGALENISDTEEVEARSTARIPIVMFQDTVSGLDCDISIFNPLAVRNTNLLAAYARIDPRVKALAFTVKHWARRRHINSPSQGTLSSYGYLLCVIHFLQTRSPPVIPNLQRPPESIIALQQRGDR-------------KQPQVLVPHPVEQGVICDTYFYDDEAPGD--EVMMPTARWFMQRNTETDGELLVGFFRYFVTEFDSARNAVSVRHAGPVSKALKAETDFWPLYTWRLGIEDPLEPWYDVGHFMRQRNHDRLRREFLRAHTILTQAAVGAAGSKGTDSFKDVVAKICTE 534          
BLAST of mRNA_Ecto-sp13_S_contig14357.3360.1 vs. uniprot
Match: D0NHG9_PHYIT (Uncharacterized protein n=11 Tax=Phytophthora TaxID=4783 RepID=D0NHG9_PHYIT)

HSP 1 Score: 246 bits (627), Expect = 8.680e-71
Identity = 140/279 (50.18%), Postives = 182/279 (65.23%), Query Frame = 1
Query:   91 TEVDS-RPTARIPIVIFNDEASGLDCDISIMNPLAIRNTHLMKAYSVADPRVKELAYVLKRWAKRRWVNNASEGTLSSYGYLLCLLHFLQTRNPPVVPNLQARRCSFCGRFLRGALPPDWAGEALHGVPRLPVVMTKQPTDGLD-------CDTYFYDPLTPGRDGERRAAVLREFGSRNTASSGELLAGFFRYFALELDCRTSVVSVRL--GGLVDRERKAEACCWSMHTRLSLEDPFETSYDVAHVLKWSRFKHVRMEFARAYALLAGXXXXXDASS 897
            T VD+ R TARIPIV+F   ASG++CD+ + N LA RNT L++AY+ ADPRV+ LAYVLK++ K+R +N A+EGTLSSYGYLL L+HFLQ ++PPV+P LQA             LPP+W    L   P LP V+++ P++ LD        DTYFYDP    ++ + + AVLRE+ SRNT + GELL GF RY+ L+ D    VVSVR    G V ++ K   C W   TRLS+EDPFE  YDVAHVLK SR K++R +F RAY LL       ++S+
Sbjct:  699 TSVDTTRLTARIPIVMFVSRASGIECDLCVENRLAQRNTSLLRAYASADPRVRMLAYVLKQFVKQRRMNCAAEGTLSSYGYLLLLIHFLQRQDPPVLPVLQA-------------LPPNWP--ELPSEP-LPTVLSRGPSEELDPSDGKSGIDTYFYDPFA-FQEPKEKLAVLREYCSRNTQTVGELLLGFLRYYGLQFDATRDVVSVRRPDAGTVTKDDKRHTCQWRFTTRLSIEDPFEVGYDVAHVLKGSRDKYIRQQFVRAYVLLMDGAIQHESST 960          
BLAST of mRNA_Ecto-sp13_S_contig14357.3360.1 vs. uniprot
Match: A0A833W152_PHYIN (Cid1 family poly A polymerase n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833W152_PHYIN)

HSP 1 Score: 246 bits (627), Expect = 9.950e-71
Identity = 140/279 (50.18%), Postives = 182/279 (65.23%), Query Frame = 1
Query:   91 TEVDS-RPTARIPIVIFNDEASGLDCDISIMNPLAIRNTHLMKAYSVADPRVKELAYVLKRWAKRRWVNNASEGTLSSYGYLLCLLHFLQTRNPPVVPNLQARRCSFCGRFLRGALPPDWAGEALHGVPRLPVVMTKQPTDGLD-------CDTYFYDPLTPGRDGERRAAVLREFGSRNTASSGELLAGFFRYFALELDCRTSVVSVRL--GGLVDRERKAEACCWSMHTRLSLEDPFETSYDVAHVLKWSRFKHVRMEFARAYALLAGXXXXXDASS 897
            T VD+ R TARIPIV+F   ASG++CD+ + N LA RNT L++AY+ ADPRV+ LAYVLK++ K+R +N A+EGTLSSYGYLL L+HFLQ ++PPV+P LQA             LPP+W    L   P LP V+++ P++ LD        DTYFYDP    ++ + + AVLRE+ SRNT + GELL GF RY+ L+ D    VVSVR    G V ++ K   C W   TRLS+EDPFE  YDVAHVLK SR K++R +F RAY LL       ++S+
Sbjct:  715 TSVDTTRLTARIPIVMFVSRASGIECDLCVENRLAQRNTSLLRAYASADPRVRMLAYVLKQFVKQRRMNCAAEGTLSSYGYLLLLIHFLQRQDPPVLPVLQA-------------LPPNWP--ELPSEP-LPTVLSRGPSEELDPSDGKSGIDTYFYDPFA-FQEPKEKLAVLREYCSRNTQTVGELLLGFLRYYGLQFDATRDVVSVRRPDAGTVTKDDKRHTCQWRFTTRLSIEDPFEVGYDVAHVLKGSRDKYIRQQFVRAYVLLMDGAIQHESST 976          
BLAST of mRNA_Ecto-sp13_S_contig14357.3360.1 vs. uniprot
Match: A0A7S1BDU3_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BDU3_9STRA)

HSP 1 Score: 236 bits (601), Expect = 1.560e-70
Identity = 127/305 (41.64%), Postives = 185/305 (60.66%), Query Frame = 1
Query:   28 HPDNAGALIESIAEKLKAAGMTEVDSRPTARIPIVIFNDEASGLDCDISIMNPLAIRNTHLMKAYSVADPRVKELAYVLKRWAKRRWVNNASEGTLSSYGYLLCLLHFLQTRNPPVVPNLQARRCSFCGRFLRGALPPDWAGEALHGVPRLPVVMTKQPTD-GLDCDTYFYDPLTPGRDGERRAAVLREFGSRNTASSGELLAGFFRYFALELDCRTSVVSVRLGGLVDRERKAEACCWSMHTRLSLEDPFETSYDVAHVLKWSRFKHVRMEFARAYALLAGXXXXXDASS--------LLETIC 915
            H D+    +  +AE L+ AGM ++ +R TARIPI++F D  + ++CDIS+ NPL++ NT L+  Y+  D RV+EL Y++K+WAK R +N+ SEGTLSSYGY+L ++HFLQ R+ P+VPNLQ  +             PD  G+ +     +PV+  + PT+     +TYFY P       +     L+   ++N+ S+G LLA FF Y+A+E D R  VVSV +   ++++ KAE  CWSM   L++EDPFET YDVAHV+K S+F H+R EFA AY  +       D+ S        L++ IC
Sbjct:  206 HFDDPPVAMGRLAEDLEEAGMLKLSARLTARIPIILFEDCETKMECDISMENPLSVLNTELLSTYANIDKRVRELGYIVKKWAKARNLNSPSEGTLSSYGYILMIIHFLQRRSRPIVPNLQRMK-------------PD--GKLVQSKEEIPVMSFQHPTERDFHVNTYFYKPKD-----KISLKSLQNMANKNSESTGVLLANFFYYYAIEFDYRQHVVSVNVDATLEKDLKAEIDCWSMRNNLAIEDPFETFYDVAHVVKPSKFHHLREEFAMAYTKIINFVHSKDSLSEPDASKIDLMDIIC 490          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14357.3360.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6M4_ECTSI1.030e-19893.16Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
K8YXG6_NANGC2.780e-8546.25Nucleotidyltransferase-like protein n=1 Tax=Nannoc... [more]
A0A835YMU6_9STRA3.460e-8548.21WW domain-containing protein n=1 Tax=Tribonema min... [more]
W7TXG0_9STRA5.260e-8146.25PAP/25A-associated n=1 Tax=Nannochloropsis gaditan... [more]
A0A6V1RBI5_HETAK9.980e-8048.44Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A4D9DCB2_9STRA4.240e-7946.39Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S2CLX1_9STRA1.790e-7445.93Hypothetical protein n=2 Tax=Dictyocha speculum Ta... [more]
D0NHG9_PHYIT8.680e-7150.18Uncharacterized protein n=11 Tax=Phytophthora TaxI... [more]
A0A833W152_PHYIN9.950e-7150.18Cid1 family poly A polymerase n=1 Tax=Phytophthora... [more]
A0A7S1BDU3_9STRA1.560e-7041.64Hypothetical protein n=2 Tax=Corethron hystrix Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14357contigEcto-sp13_S_contig14357:28..4219 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score571.2
Seed ortholog evalue2.8e-160
Seed eggNOG ortholog2880.D7G6M4
Model size921
KEGG koko:K13291
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0005488,GO:0006139,GO:0006378,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010604,GO:0010628,GO:0016070,GO:0016071,GO:0016073,GO:0016074,GO:0016180,GO:0016740,GO:0016772,GO:0016779,GO:0019219,GO:0019222,GO:0031123,GO:0031124,GO:0031126,GO:0031323,GO:0031325,GO:0034470,GO:0034641,GO:0034660,GO:0043144,GO:0043170,GO:0043628,GO:0043629,GO:0043631,GO:0044237,GO:0044238,GO:0045935,GO:0046483,GO:0048518,GO:0048522,GO:0048583,GO:0048584,GO:0050265,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060147,GO:0060148,GO:0060255,GO:0060964,GO:0060966,GO:0060968,GO:0065007,GO:0070569,GO:0070920,GO:0071050,GO:0071076,GO:0071704,GO:0080090,GO:0090065,GO:0090304,GO:0097159,GO:0140098,GO:1900368,GO:1900370,GO:1901360,GO:1901363,GO:1903705
Exons7
EggNOG free text desc.RNA uridylyltransferase activity
EggNOG OGsCOG5260@1,KOG2277@2759
EC2.7.7.52
Cds size921
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14357.3360.1prot_Ecto-sp13_S_contig14357.3360.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig14357 28..4219 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462766.6121662-CDS-Ecto-sp13_S_contig14357:27..1231681462766.6121662-CDS-Ecto-sp13_S_contig14357:27..123Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14357 28..123 +
1681462766.623749-CDS-Ecto-sp13_S_contig14357:654..7741681462766.623749-CDS-Ecto-sp13_S_contig14357:654..774Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14357 655..774 +
1681462766.633168-CDS-Ecto-sp13_S_contig14357:1281..14941681462766.633168-CDS-Ecto-sp13_S_contig14357:1281..1494Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14357 1282..1494 +
1681462766.643119-CDS-Ecto-sp13_S_contig14357:2083..22001681462766.643119-CDS-Ecto-sp13_S_contig14357:2083..2200Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14357 2084..2200 +
1681462766.6528854-CDS-Ecto-sp13_S_contig14357:2736..28711681462766.6528854-CDS-Ecto-sp13_S_contig14357:2736..2871Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14357 2737..2871 +
1681462766.6635783-CDS-Ecto-sp13_S_contig14357:3423..35271681462766.6635783-CDS-Ecto-sp13_S_contig14357:3423..3527Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14357 3424..3527 +
1681462766.6851525-CDS-Ecto-sp13_S_contig14357:4083..42191681462766.6851525-CDS-Ecto-sp13_S_contig14357:4083..4219Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14357 4084..4219 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig14357.3360.1

>prot_Ecto-sp13_S_contig14357.3360.1 ID=prot_Ecto-sp13_S_contig14357.3360.1|Name=mRNA_Ecto-sp13_S_contig14357.3360.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=307bp
CIEYARGVQHPDNAGALIESIAEKLKAAGMTEVDSRPTARIPIVIFNDEA
SGLDCDISIMNPLAIRNTHLMKAYSVADPRVKELAYVLKRWAKRRWVNNA
SEGTLSSYGYLLCLLHFLQTRNPPVVPNLQARRCSFCGRFLRGALPPDWA
GEALHGVPRLPVVMTKQPTDGLDCDTYFYDPLTPGRDGERRAAVLREFGS
RNTASSGELLAGFFRYFALELDCRTSVVSVRLGGLVDRERKAEACCWSMH
TRLSLEDPFETSYDVAHVLKWSRFKHVRMEFARAYALLAGGGGGGDASSL
LETICSQ
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mRNA from alignment at Ecto-sp13_S_contig14357:28..4219+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig14357.3360.1 ID=mRNA_Ecto-sp13_S_contig14357.3360.1|Name=mRNA_Ecto-sp13_S_contig14357.3360.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4192bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14357:28..4219+ (Ectocarpus species13 EcNAP12_S_4_19m)
TGCATCGAGTATGCCAGAGGCGTTCAGCACCCCGACAACGCCGGTGCCCT GATCGAGTCCATCGCCGAAAAACTCAAGGCCGCGGGCATGACTGAGGTGT GTGCGCTGGCTGTGCTTAAGTGTTTCCCGCCGCCCCCCGCGGTTCGTTCT CCTACGATTGTTGTTGTTGTCCTCTTCACATTATAAACCGTTCCGGTCTC CGCTCGGTACGCTCTAGTATCCGTACTGGTCCACCTGACGCGGACGCCTT GCGTGGTCACAGGCCAACTACCCAAAAAAAGGATACACCTTTCTAGATAC CAAAGGACGTTCTGCTACGATGCGTTTGAGAAGAACGGAGAAAGGCGAGA CCCCTTGTTTCGTCATCTGATAATGTGCAGAAAAACCGAGGCGTTGGTAG GTTCCGTTGGATGCGCCTGGCACGTCGTCTCTTGCCTCTCCCTCCCTTCC TGAACTAGCCGTCATTGCGCTTCGTTTCTGAGCGGGAGCCAGGTATATGT TTGAAGATTATCAAAGCATACATGTCACCTGTTTGTCTTTCTACATACGG AGAATATATTGTAGATAATCATTTTAAACACGTGTTTCCTCCTCTTTGGA ATCGAACGGACCGACCGACCCGAGCAGGTGGACAGCAGGCCGACGGCTCG CATCCCTATCGTCATCTTCAACGACGAAGCCTCCGGCCTTGACTGCGACA TCTCGATCATGAACCCCTTGGCCATCCGCAACACTCACCTTATGAAGGTC ATGGTGTAGTATCGTCGTAATTGTTGTTGCTGTTGTAATTTTTGTTGTTG TGTTGCACCTATCCCCCCTAGATTTGATATGTTGTGTTTACATTTCCTTG TAGCGTGTCACGAACCCGGCCTCCGCGACGAACTTCATCTCCGAGGAGTT GAATCTCCGATCGCGGGGGTGTCCATCGCGCGCGGGGCCCAATCGAATGG GCGATCGGAGGACAGCTTTCTGAGGTTGAGGTGATCGGCGATAAATCTAT CATGGCTGATGTTATCCGACGTTTGATTATCCCGATATTGATCGCCGATA AACGATCGATGATATCCAACACTTTATTCCCCCGATGTTGATGATCACTC ACGTCGACACACCAGAAATTAATCTATCTTCGATCGAATTGGTAGTGTCC TTTCAAACAAAAAACGAAATATATCTCCGTTCGAAGGGATGATATGTGAA TCAATCTCTCCTCATGACCAAAAACACGCCTGTGCTTGTGGGCGCGCGCG CCAGGCGTACTCCGTAGCGGACCCCCGCGTCAAGGAGCTGGCGTACGTGC TCAAGCGATGGGCCAAGCGTCGGTGGGTCAACAACGCGAGCGAGGGCACG CTGTCGTCCTACGGCTACCTGCTGTGCCTCTTGCACTTCCTGCAGACGCG GAACCCCCCGGTTGTTCCCAACCTCCAGGCAAGGCGATGTTCTTTTTGCG GACGGTTTTTGCGAGGGGTTGATGTGCAGGCGTTGCGGCTGGAAGGCAGG AGCAGCTACATATGCTGTATGCTAGGTGGTCGTTTCTGGAAGACTGTTTT TTGTTATTTTCTCGCCCCCTTTTGTGTCATCTAACCGTGGCGACGAAGTT GTTGTTTGTGCTGTTGCCCCTTGCAAGTTGTTCTTGCTCTGTAAGGGCTG TTGTAGCCACTGGGTAAGATCGTGAAATTGTCCTGGCAGCGCATGTGGTT GTTGCTGTTTTGTGCGCCGACGGTGCTGATTTGCCTGTCACCGTTGACTG TCCGTCTGTTCACCACCGAAAGCTTGGGGTCCTGATGGTATGTACGGTGT ACCGCTACTGCTGTGGTCCGCCTGCATCCAAGGTTCCGGCAGCGACGGAG TTACTGGTGTGCTCCTCTGGCGTGACAGCATAAATACCGCGCCCGTTTCG CCTGTCCCACCCCGGTACTCACCAAAGATCCCCCGTGTGGCCCCATCCTC GTCCTTTCCGCCGACCCCCCGGGGTGACATAATGCTCCCCGGCTCTCGAT TGGACTGGATTTGCTGTTGCCGTACCCGACTCTTCTTGTTCCTGTTGCTG CTTCAGGCGCTGCCGCCGGACTGGGCAGGCGAAGCGCTTCACGGGGTTCC CAGGTTGCCGGTCGTGATGACCAAGCAGCCCACGGATGGCTTGGACTGCG ACACGTACTTTTACGACCCGCTGGTGAGTGTTTGCCTATGTGTATGTCCC CGGTGGGGGGGGTAACTGGTATCCGCGCCTGCTTCGTGTGTGTTACGCAA GGCACGTCTGTGTTTTTCTCTCTGAGCGCCCAAAGAGGTGAGGTTCTTGG GGTGTACATTGATCGTGCGTGTGGCTATTGGAGCCGAATTGCGGACAAGA CATTCGGTAGAGTCGTGTGCACGGCTTCGGTCGATCGGTCGTAGAACTGG CCTTCTGTTGCTGTGGCGTTGCGTGTTGGGTAATTCGTTTTGCGGAACTG GGCTGTGTGTTGCACGCCCTCGCCGCCGCGGCCGCCGCCGCTGTCATCAT TGGATGTGCGTGCGGGCGCTTTCACATGGATCCATTCCTCTCCCTCTCCT TCTCTTCTCCTCTTTCTCTTGCGGCTATGTCCCTCCTTGCTTTCAACTCG TTCATCTCCCCGCCGCCGCTGTCCATGTCTCTCCTTCTCCACCCCCTCGT CCCCACTTCATGTGTCTACCTTCGCTGCTTGCCATGCTGCTCCATTTTGG AACCAACAGACACCAGGCAGGGACGGGGAGCGCAGGGCCGCCGTGCTGCG GGAGTTCGGGTCCCGCAACACAGCCTCATCGGGAGAACTCCTGGCGGGAT TCTTCCGCTACTTCGCTCTTGAGCTGGACTGCAGGACCAGCGTGGTGAGC TATTAGATACGATGCACGACCAGGCGGTTGCAAAGTGGTGGTGGGTGGCA TGCATGCGTGTGTGCGTGTGACGACATACCGTGCGGTGTGAGTTTATTTT TCTCTTCACGTGGCAGTTTTTTTCGCGAGGTATGTACGTATTGATGTTTT TTGTCGCTGCAGTGAGATTTTCTTGGTGCATCGTTTTTGTTTTCGAGTTG CGGGCCTCCTCTCGTTCCCCATCTCTCATCTCATTTACCATCACCCATCC TCCCCTATATTCATGATATAGCGAGGAAAAGACGATACGGGGGCATGGGA AGTGGGTTGAAAAGGCGGGAAGTGATATCGACAGGATGGATAGACTAGGG AAGACATTTTTGAGCCATCTTTGGCAAAATAGGAAGGAACGATTGGCCAT CGTTGATCGGTCCTGTGGAAAAAATACTTGGTCCTCTCGAGGACGCGTGG TCAATGGTCTAACCGCTAAGGCATGCAAAACACAAGAGTACGCCTCCCCC GCCCGCCCTATTCCCCCATTCTTTGGATGCACTTTGTGTGCGGTAGGTAA GCGTCCGTCTCGGGGGTCTGGTCGACCGCGAAAGGAAGGCGGAAGCTTGC TGCTGGAGCATGCACACCCGCCTCAGCCTGGAGGACCCTTTCGAGACCTC GTGAGTCAAAAACCTCGGGTTGGCTGTGGCAAGCGCTATGATATACTTGT AATTATAATCACAAGGGGTGGAGCGAATTGAAGCGCCTCGAACGAGTGCA TGGGGCTAGAGCAGTAAGCTTTGGAGTGAGAATATTGAAGACTACAACCT GCAGCAGCAGCAGCAGCAGCAACAGCAGCGGTGGCTGTGTGATAGTCGTG TTACGGAAGATTTCTGCAGTGCGCAAGGTTGTGTTCGGTGCGTGAAGCGC TTCTTTCGACTTGGGGGAGACCTCCTTTATCACCCGCGGCCTTGTGCTGA CCAAGGTGGTGATGGTGTGTGTGTGTCTCGGCAGTTTTGTTTCTGTTTTT TTCTGGCAGCGTGTTGAGTAGCGCTCTGGTGTGCGCTTCACATCTGTCAG CACCCACCAACACTTCAGGACGGCTGCGCCACCTATGGGCATTCATACCG TACCCCCACACCTACTGCGCACACTGCTGTCTGCACCCATCGTAACCCTC CCTGCCTCCGCCCCATCACCCCCCATTGCTGTTCCGATATGCTCCGCTCT CAAAAGGTACGATGTCGCACACGTCCTCAAGTGGTCTCGCTTCAAGCACG TTCGGATGGAGTTCGCCAGGGCCTACGCTCTACTGGCCGGAGGTGGAGGC GGAGGGGACGCCTCCTCCCTGCTGGAGACAATATGCAGCCAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig14357:28..4219+

>mRNA_Ecto-sp13_S_contig14357.3360.1 ID=mRNA_Ecto-sp13_S_contig14357.3360.1|Name=mRNA_Ecto-sp13_S_contig14357.3360.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=921bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14357:28..4219+ (Ectocarpus species13 EcNAP12_S_4_19m)
TGCATCGAGTATGCCAGAGGCGTTCAGCACCCCGACAACGCCGGTGCCCT
GATCGAGTCCATCGCCGAAAAACTCAAGGCCGCGGGCATGACTGAGGTGG
ACAGCAGGCCGACGGCTCGCATCCCTATCGTCATCTTCAACGACGAAGCC
TCCGGCCTTGACTGCGACATCTCGATCATGAACCCCTTGGCCATCCGCAA
CACTCACCTTATGAAGGCGTACTCCGTAGCGGACCCCCGCGTCAAGGAGC
TGGCGTACGTGCTCAAGCGATGGGCCAAGCGTCGGTGGGTCAACAACGCG
AGCGAGGGCACGCTGTCGTCCTACGGCTACCTGCTGTGCCTCTTGCACTT
CCTGCAGACGCGGAACCCCCCGGTTGTTCCCAACCTCCAGGCAAGGCGAT
GTTCTTTTTGCGGACGGTTTTTGCGAGGGGCGCTGCCGCCGGACTGGGCA
GGCGAAGCGCTTCACGGGGTTCCCAGGTTGCCGGTCGTGATGACCAAGCA
GCCCACGGATGGCTTGGACTGCGACACGTACTTTTACGACCCGCTGACAC
CAGGCAGGGACGGGGAGCGCAGGGCCGCCGTGCTGCGGGAGTTCGGGTCC
CGCAACACAGCCTCATCGGGAGAACTCCTGGCGGGATTCTTCCGCTACTT
CGCTCTTGAGCTGGACTGCAGGACCAGCGTGGTAAGCGTCCGTCTCGGGG
GTCTGGTCGACCGCGAAAGGAAGGCGGAAGCTTGCTGCTGGAGCATGCAC
ACCCGCCTCAGCCTGGAGGACCCTTTCGAGACCTCGTACGATGTCGCACA
CGTCCTCAAGTGGTCTCGCTTCAAGCACGTTCGGATGGAGTTCGCCAGGG
CCTACGCTCTACTGGCCGGAGGTGGAGGCGGAGGGGACGCCTCCTCCCTG
CTGGAGACAATATGCAGCCAG
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