mRNA_Ecto-sp13_S_contig1427.3313.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig1427.3313.1
Unique NamemRNA_Ecto-sp13_S_contig1427.3313.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1427.3313.1 vs. uniprot
Match: D8LLP5_ECTSI (SAC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLP5_ECTSI)

HSP 1 Score: 196 bits (499), Expect = 3.700e-56
Identity = 96/99 (96.97%), Postives = 97/99 (97.98%), Query Frame = 1 
Query:   34 ERFFWNLGVLEPLLELREELEGRRNSGGDGGGAAVAAVDRWLTPVMSGFLQVERGCRAGERSFDVMFVSRRSRLRQGTRYTRRGIDDGGNVANFVETEQ 330
            ERFFWNLGVLEPLLELREELEGRRN GGDGG AAVAAVDRWLTPVMSGFLQVERGCRAGER+FDVMFVSRRSRLRQGTRYTRRGIDDGGNVANFVETEQ
Sbjct:  372 ERFFWNLGVLEPLLELREELEGRRNGGGDGGVAAVAAVDRWLTPVMSGFLQVERGCRAGERTFDVMFVSRRSRLRQGTRYTRRGIDDGGNVANFVETEQ 470
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1427.3313.1 vs. uniprot
Match: A0A182UEP5_9DIPT (SAC domain-containing protein n=4 Tax=gambiae species complex TaxID=44542 RepID=A0A182UEP5_9DIPT)

HSP 1 Score: 93.2 bits (230), Expect = 7.420e-20
Identity = 51/103 (49.51%), Postives = 65/103 (63.11%), Query Frame = 1 
Query:   25 PPDERFFWNLGVLEPLLELREELEGRRNSGGDGGGAAVAAVDRWLTPVMSGFLQVERGCRAGERSFDVMFVSRRSRLRQGTRYTRRGIDDGGNVANFVETEQV 333
            PPD+RF+WN  +L  LL +  E +G           A AA D W+ P++ GF+QVE+ C  G   F +  VSRRSR R GTRY RRG+D+ GN AN+VETEQV
Sbjct:  224 PPDDRFYWNRPMLAELLRVVGEQQG----------GADAAQD-WVVPIIQGFVQVEQ-CVIGNECFTLALVSRRSRNRAGTRYKRRGVDEHGNCANYVETEQV 314
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1427.3313.1 vs. uniprot
Match: A0A182QH54_9DIPT (Uncharacterized protein n=2 Tax=Neomyzomyia TaxID=44536 RepID=A0A182QH54_9DIPT)

HSP 1 Score: 92.8 bits (229), Expect = 1.120e-19
Identity = 49/103 (47.57%), Postives = 61/103 (59.22%), Query Frame = 1 
Query:   25 PPDERFFWNLGVLEPLLELREELEGRRNSGGDGGGAAVAAVDRWLTPVMSGFLQVERGCRAGERSFDVMFVSRRSRLRQGTRYTRRGIDDGGNVANFVETEQV 333
            PPD+RF+WN  +L  LL L E                  A D W+ P++ GF+QVE+ C  G   F +  VSRRSR R GTRY RRG+D+ GN AN+VETEQV
Sbjct:  263 PPDDRFYWNRPMLAELLRLTE---------------TEPAADGWVLPIIQGFVQVEQ-CVIGNECFTLALVSRRSRNRAGTRYKRRGVDEHGNCANYVETEQV 349
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1427.3313.1 vs. uniprot
Match: A0A0P8YGC3_DROAN (Uncharacterized protein, isoform D n=2 Tax=ananassae subgroup TaxID=32347 RepID=A0A0P8YGC3_DROAN)

HSP 1 Score: 92.0 bits (227), Expect = 2.010e-19
Identity = 49/111 (44.14%), Postives = 64/111 (57.66%), Query Frame = 1 
Query:    1 TPPTAVAPPPDERFFWNLGVLEPLLELREELEGRRNSGGDGGGAAVAAVDRWLTPVMSGFLQVERGCRAGERSFDVMFVSRRSRLRQGTRYTRRGIDDGGNVANFVETEQV 333
            T P    P PDERFFWN+ ++E LL++ ++                     W+ PV+ GF+QVE  C  G   F +  VSRRSR R GTRY RRG+D+ GN AN+VETEQ+
Sbjct:  221 TKPGESQPEPDERFFWNMHMIEDLLKMNDKT--------------------WILPVIQGFVQVEP-CVIGNECFTLALVSRRSRHRAGTRYKRRGVDEKGNCANYVETEQI 310
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1427.3313.1 vs. uniprot
Match: A0A0P9A128_DROAN (Uncharacterized protein, isoform C n=6 Tax=ananassae subgroup TaxID=32347 RepID=A0A0P9A128_DROAN)

HSP 1 Score: 92.0 bits (227), Expect = 2.090e-19
Identity = 49/111 (44.14%), Postives = 64/111 (57.66%), Query Frame = 1 
Query:    1 TPPTAVAPPPDERFFWNLGVLEPLLELREELEGRRNSGGDGGGAAVAAVDRWLTPVMSGFLQVERGCRAGERSFDVMFVSRRSRLRQGTRYTRRGIDDGGNVANFVETEQV 333
            T P    P PDERFFWN+ ++E LL++ ++                     W+ PV+ GF+QVE  C  G   F +  VSRRSR R GTRY RRG+D+ GN AN+VETEQ+
Sbjct:  221 TKPGESQPEPDERFFWNMHMIEDLLKMNDKT--------------------WILPVIQGFVQVEP-CVIGNECFTLALVSRRSRHRAGTRYKRRGVDEKGNCANYVETEQI 310
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1427.3313.1 vs. uniprot
Match: A0A1I8M1E0_MUSDO (Uncharacterized protein n=2 Tax=Musca domestica TaxID=7370 RepID=A0A1I8M1E0_MUSDO)

HSP 1 Score: 91.3 bits (225), Expect = 3.880e-19
Identity = 45/102 (44.12%), Postives = 62/102 (60.78%), Query Frame = 1 
Query:   28 PDERFFWNLGVLEPLLELREELEGRRNSGGDGGGAAVAAVDRWLTPVMSGFLQVERGCRAGERSFDVMFVSRRSRLRQGTRYTRRGIDDGGNVANFVETEQV 333
            PDERFFWN+ +LE +++L ++                     W+ P++ GF+QVE  C  G   F++  VSRRSR R GTRY RRG+D+ GN AN+VETEQ+
Sbjct:  243 PDERFFWNMHMLEAIMKLNDKT--------------------WILPIIQGFVQVET-CVIGNECFNLALVSRRSRHRAGTRYKRRGVDENGNCANYVETEQI 323
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1427.3313.1 vs. uniprot
Match: A0A1W4VLT0_DROFC (phosphatidylinositide phosphatase SAC2 isoform X2 n=10 Tax=Sophophora TaxID=32341 RepID=A0A1W4VLT0_DROFC)

HSP 1 Score: 90.5 bits (223), Expect = 6.980e-19
Identity = 46/104 (44.23%), Postives = 60/104 (57.69%), Query Frame = 1 
Query:   22 PPPDERFFWNLGVLEPLLELREELEGRRNSGGDGGGAAVAAVDRWLTPVMSGFLQVERGCRAGERSFDVMFVSRRSRLRQGTRYTRRGIDDGGNVANFVETEQV 333
            P PDERFFWN+ ++  LL L ++                     W+ P++ GF+QVE  C  G   F +  VSRRSR R GTRY RRG+D+ GN AN+VETEQ+
Sbjct:  229 PQPDERFFWNMHMIRDLLSLNDKT--------------------WILPIIQGFMQVEN-CVIGNECFTLALVSRRSRHRAGTRYKRRGVDEKGNCANYVETEQI 311
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1427.3313.1 vs. uniprot
Match: UPI0011566120 (phosphatidylinositide phosphatase SAC2 isoform X1 n=1 Tax=Aedes albopictus TaxID=7160 RepID=UPI0011566120)

HSP 1 Score: 90.5 bits (223), Expect = 7.140e-19
Identity = 45/103 (43.69%), Postives = 62/103 (60.19%), Query Frame = 1 
Query:   25 PPDERFFWNLGVLEPLLELREELEGRRNSGGDGGGAAVAAVDRWLTPVMSGFLQVERGCRAGERSFDVMFVSRRSRLRQGTRYTRRGIDDGGNVANFVETEQV 333
            PPD+RF+WNL +L+ +++L +                    D W+ P++ GF+QVE+ C  G   F +  VSRRSR R GTRY RRG+D+ G  AN+VETEQV
Sbjct:  228 PPDDRFYWNLNMLKDIIKLND--------------------DNWVLPIIQGFVQVEQ-CVIGNECFTLALVSRRSRYRAGTRYKRRGVDEDGYCANYVETEQV 309
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1427.3313.1 vs. uniprot
Match: A0A6P8ZB56_DROAB (phosphatidylinositide phosphatase SAC2 isoform X1 n=2 Tax=Drosophila albomicans TaxID=7291 RepID=A0A6P8ZB56_DROAB)

HSP 1 Score: 89.7 bits (221), Expect = 1.350e-18
Identity = 45/104 (43.27%), Postives = 61/104 (58.65%), Query Frame = 1 
Query:   22 PPPDERFFWNLGVLEPLLELREELEGRRNSGGDGGGAAVAAVDRWLTPVMSGFLQVERGCRAGERSFDVMFVSRRSRLRQGTRYTRRGIDDGGNVANFVETEQV 333
            P PDERFFWN+ ++  +L++ ++                     W+ P++ GF+QVE  C  G   F +  VSRRSR R GTRY RRG+DD GN AN+VETEQ+
Sbjct:  227 PQPDERFFWNMHMISDILKMNDKT--------------------WILPIIQGFVQVE-ACVIGNDCFTLALVSRRSRHRAGTRYKRRGVDDKGNCANYVETEQI 309
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1427.3313.1 vs. uniprot
Match: Q7QFH3_ANOGA (AGAP000483-PA n=1 Tax=Anopheles gambiae TaxID=7165 RepID=Q7QFH3_ANOGA)

HSP 1 Score: 89.4 bits (220), Expect = 1.830e-18
Identity = 47/103 (45.63%), Postives = 61/103 (59.22%), Query Frame = 1 
Query:   25 PPDERFFWNLGVLEPLLELREELEGRRNSGGDGGGAAVAAVDRWLTPVMSGFLQVERGCRAGERSFDVMFVSRRSRLRQGTRYTRRGIDDGGNVANFVETEQV 333
            PPD+RF+WN  +L  LL +  E  G  +               W+ P++ GF+QVE+ C  G   F +  VSRRSR R GTRY RRG+D+ GN AN+VETEQV
Sbjct:  222 PPDDRFYWNRPMLAELLRVVSEQPGGED---------------WVVPIIQGFVQVEQ-CVIGNECFTLALVSRRSRNRAGTRYKRRGVDEHGNCANYVETEQV 308
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1427.3313.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LLP5_ECTSI3.700e-5696.97SAC domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A182UEP5_9DIPT7.420e-2049.51SAC domain-containing protein n=4 Tax=gambiae spec... [more]
A0A182QH54_9DIPT1.120e-1947.57Uncharacterized protein n=2 Tax=Neomyzomyia TaxID=... [more]
A0A0P8YGC3_DROAN2.010e-1944.14Uncharacterized protein, isoform D n=2 Tax=ananass... [more]
A0A0P9A128_DROAN2.090e-1944.14Uncharacterized protein, isoform C n=6 Tax=ananass... [more]
A0A1I8M1E0_MUSDO3.880e-1944.12Uncharacterized protein n=2 Tax=Musca domestica Ta... [more]
A0A1W4VLT0_DROFC6.980e-1944.23phosphatidylinositide phosphatase SAC2 isoform X2 ... [more]
UPI00115661207.140e-1943.69phosphatidylinositide phosphatase SAC2 isoform X1 ... [more]
A0A6P8ZB56_DROAB1.350e-1843.27phosphatidylinositide phosphatase SAC2 isoform X1 ... [more]
Q7QFH3_ANOGA1.830e-1845.63AGAP000483-PA n=1 Tax=Anopheles gambiae TaxID=7165... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1427contigEcto-sp13_S_contig1427:29..361 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score197.2
Seed ortholog evalue4e-48
Seed eggNOG ortholog2880.D8LLP5
Preferred nameSACM1L
Model size333
KEGG rclassRC00078
KEGG koko:K21797
KEGG ReactionR11680
KEGG Pathwayko00562,ko01100,ko04070,map00562,map01100,map04070
Hectar predicted targeting categoryother localisation
GOsGO:0000139,GO:0000226,GO:0000902,GO:0000904,GO:0001700,GO:0001932,GO:0001933,GO:0002009,GO:0002178,GO:0003674,GO:0003824,GO:0004438,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005741,GO:0005783,GO:0005789,GO:0005794,GO:0005795,GO:0005797,GO:0005886,GO:0005887,GO:0005911,GO:0005938,GO:0006629,GO:0006644,GO:0006650,GO:0006661,GO:0006793,GO:0006796,GO:0006810,GO:0006928,GO:0006935,GO:0006950,GO:0006970,GO:0006996,GO:0007010,GO:0007017,GO:0007018,GO:0007275,GO:0007391,GO:0007399,GO:0007409,GO:0007411,GO:0008037,GO:0008038,GO:0008088,GO:0008150,GO:0008152,GO:0008328,GO:0008610,GO:0008654,GO:0009058,GO:0009506,GO:0009605,GO:0009611,GO:0009628,GO:0009651,GO:0009653,GO:0009790,GO:0009792,GO:0009826,GO:0009888,GO:0009892,GO:0009932,GO:0009966,GO:0009968,GO:0009987,GO:0010015,GO:0010053,GO:0010054,GO:0010563,GO:0010605,GO:0010646,GO:0010648,GO:0010970,GO:0012505,GO:0016020,GO:0016021,GO:0016043,GO:0016049,GO:0016198,GO:0016199,GO:0016311,GO:0016331,GO:0016787,GO:0016788,GO:0016791,GO:0017059,GO:0019220,GO:0019222,GO:0019637,GO:0019867,GO:0021700,GO:0022008,GO:0022622,GO:0023051,GO:0023057,GO:0030030,GO:0030054,GO:0030154,GO:0030173,GO:0030176,GO:0030182,GO:0030258,GO:0030424,GO:0030425,GO:0030427,GO:0030705,GO:0031090,GO:0031122,GO:0031175,GO:0031211,GO:0031224,GO:0031226,GO:0031227,GO:0031228,GO:0031300,GO:0031301,GO:0031323,GO:0031324,GO:0031399,GO:0031400,GO:0031520,GO:0031966,GO:0031967,GO:0031968,GO:0031975,GO:0031984,GO:0031985,GO:0032268,GO:0032269,GO:0032281,GO:0032501,GO:0032502,GO:0032872,GO:0032873,GO:0032989,GO:0032990,GO:0032991,GO:0034593,GO:0034595,GO:0034596,GO:0034702,GO:0034703,GO:0035339,GO:0035618,GO:0035619,GO:0035838,GO:0036092,GO:0036477,GO:0040007,GO:0040011,GO:0042175,GO:0042221,GO:0042325,GO:0042326,GO:0042330,GO:0042578,GO:0042995,GO:0043005,GO:0043025,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043235,GO:0043408,GO:0043409,GO:0043812,GO:0043813,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044297,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044431,GO:0044432,GO:0044444,GO:0044446,GO:0044459,GO:0044463,GO:0044464,GO:0045017,GO:0045936,GO:0046328,GO:0046329,GO:0046474,GO:0046486,GO:0046488,GO:0046664,GO:0046839,GO:0046856,GO:0046907,GO:0048364,GO:0048468,GO:0048469,GO:0048519,GO:0048523,GO:0048583,GO:0048585,GO:0048588,GO:0048589,GO:0048598,GO:0048666,GO:0048667,GO:0048699,GO:0048729,GO:0048731,GO:0048764,GO:0048765,GO:0048767,GO:0048768,GO:0048812,GO:0048856,GO:0048858,GO:0048869,GO:0050789,GO:0050794,GO:0050808,GO:0050896,GO:0051171,GO:0051172,GO:0051174,GO:0051179,GO:0051234,GO:0051246,GO:0051248,GO:0051286,GO:0051641,GO:0051649,GO:0052744,GO:0052866,GO:0055044,GO:0060074,GO:0060255,GO:0060429,GO:0060560,GO:0061564,GO:0065007,GO:0070302,GO:0070303,GO:0071683,GO:0071695,GO:0071704,GO:0071840,GO:0071944,GO:0080090,GO:0080134,GO:0080135,GO:0080147,GO:0090404,GO:0090406,GO:0090407,GO:0090558,GO:0090627,GO:0097435,GO:0097447,GO:0097458,GO:0097485,GO:0098588,GO:0098590,GO:0098791,GO:0098796,GO:0098797,GO:0098802,GO:0098805,GO:0098827,GO:0098878,GO:0099111,GO:0099402,GO:0099568,GO:0106018,GO:0120025,GO:0120036,GO:0120038,GO:0120039,GO:1901576,GO:1902494,GO:1902495,GO:1902531,GO:1902532,GO:1905392,GO:1905961,GO:1990234,GO:1990351
Exons1
EggNOG free text desc.phosphatidylinositol-4-phosphate phosphatase activity
EggNOG OGsCOG5329@1,KOG1889@2759
Cds size333
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462762.9560263-CDS-Ecto-sp13_S_contig1427:28..3611681462762.9560263-CDS-Ecto-sp13_S_contig1427:28..361Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1427 29..361 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1427.3313.1prot_Ecto-sp13_S_contig1427.3313.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig1427 29..361 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig1427.3313.1

>prot_Ecto-sp13_S_contig1427.3313.1 ID=prot_Ecto-sp13_S_contig1427.3313.1|Name=mRNA_Ecto-sp13_S_contig1427.3313.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=111bp
TPPTAVAPPPDERFFWNLGVLEPLLELREELEGRRNSGGDGGGAAVAAVD
RWLTPVMSGFLQVERGCRAGERSFDVMFVSRRSRLRQGTRYTRRGIDDGG
NVANFVETEQV
back to top

mRNA from alignment at Ecto-sp13_S_contig1427:29..361-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig1427.3313.1 ID=mRNA_Ecto-sp13_S_contig1427.3313.1|Name=mRNA_Ecto-sp13_S_contig1427.3313.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=333bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1427:29..361- (Ectocarpus species13 EcNAP12_S_4_19m)
ACCCCGCCCACGGCCGTAGCGCCGCCCCCAGACGAACGATTCTTTTGGAA
CTTGGGGGTCTTGGAGCCGCTGCTCGAGCTCCGGGAAGAGCTGGAAGGGC
GGCGGAATAGCGGCGGCGACGGGGGTGGTGCGGCGGTGGCGGCCGTGGAC
CGGTGGCTGACGCCGGTGATGAGCGGGTTTCTGCAGGTGGAGCGGGGCTG
CCGCGCCGGGGAGCGGAGCTTCGACGTGATGTTCGTCTCGAGGCGGAGCC
GGCTGAGGCAGGGCACGAGGTACACGCGCCGCGGCATCGACGACGGCGGG
AACGTGGCCAACTTCGTGGAGACCGAGCAGGTG
back to top

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1427:29..361-

>mRNA_Ecto-sp13_S_contig1427.3313.1 ID=mRNA_Ecto-sp13_S_contig1427.3313.1|Name=mRNA_Ecto-sp13_S_contig1427.3313.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=333bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1427:29..361- (Ectocarpus species13 EcNAP12_S_4_19m)
ACCCCGCCCACGGCCGTAGCGCCGCCCCCAGACGAACGATTCTTTTGGAA
CTTGGGGGTCTTGGAGCCGCTGCTCGAGCTCCGGGAAGAGCTGGAAGGGC
GGCGGAATAGCGGCGGCGACGGGGGTGGTGCGGCGGTGGCGGCCGTGGAC
CGGTGGCTGACGCCGGTGATGAGCGGGTTTCTGCAGGTGGAGCGGGGCTG
CCGCGCCGGGGAGCGGAGCTTCGACGTGATGTTCGTCTCGAGGCGGAGCC
GGCTGAGGCAGGGCACGAGGTACACGCGCCGCGGCATCGACGACGGCGGG
AACGTGGCCAACTTCGTGGAGACCGAGCAGGTG
back to top