mRNA_Ecto-sp13_S_contig1408.3188.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1408.3188.1 vs. uniprot
Match: D7G0Y1_ECTSI (N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0Y1_ECTSI) HSP 1 Score: 197 bits (502), Expect = 2.020e-56 Identity = 96/101 (95.05%), Postives = 97/101 (96.04%), Query Frame = 1
Query: 40 MGQKVGKASFEDVVKPFVNLPDESIRALWQEFNLCATGWGVSPKFFNQLCQAMAKSIGTETNEITNNEFFAALDTDKNNLVDGLELMSTLGMLSGMPREDK 342
MGQKVGKASF DVVKPFVNLPDESIRALWQEFNLCATGWGVSPKFFNQLCQAMAKSIGTE NE+ N EFFAALDTDKNNLVDGLELMSTLGMLSGMPREDK
Sbjct: 1 MGQKVGKASFGDVVKPFVNLPDESIRALWQEFNLCATGWGVSPKFFNQLCQAMAKSIGTEANEVANKEFFAALDTDKNNLVDGLELMSTLGMLSGMPREDK 101
BLAST of mRNA_Ecto-sp13_S_contig1408.3188.1 vs. uniprot
Match: A0A7S2RFV1_9STRA (Hypothetical protein (Fragment) n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RFV1_9STRA) HSP 1 Score: 74.7 bits (182), Expect = 2.610e-14 Identity = 40/105 (38.10%), Postives = 59/105 (56.19%), Query Frame = 1
Query: 40 MGQKVGKASFEDVVKPFVNLPDESIRALWQEFNLCATGWGVSPKFFNQLCQAMAKSIGTETNE----ITNNEFFAALDTDKNNLVDGLELMSTLGMLSGMPREDK 342
MGQ +GKA + +P VNL S+ LW+ FN A G+G++ + ++ A+ S+ + +T F ALDTDKN L+D LE + TL MLSG+ +K
Sbjct: 1 MGQLLGKARLREAAEPLVNLDGTSVYVLWESFNDVAEGFGINVEELTEIISALQNSVFAHAPKQVILVTVERMFEALDTDKNMLIDSLEALVTLCMLSGIELREK 105
BLAST of mRNA_Ecto-sp13_S_contig1408.3188.1 vs. uniprot
Match: A0A2R5G5S9_9STRA (Echinoderm microtubule-associated protein-like 1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G5S9_9STRA) HSP 1 Score: 75.5 bits (184), Expect = 1.530e-13 Identity = 41/105 (39.05%), Postives = 57/105 (54.29%), Query Frame = 1
Query: 40 MGQKVGKASFEDVVKPFVNLPDESIRALWQEFNLCATGWGVSPKFFNQLCQAMAKSIGTETNEITN----NEFFAALDTDKNNLVDGLELMSTLGMLSGMPREDK 342
MGQ +GKA + +PF NL + + LW+ FN A G+G++ ++C A+ + + F ALDTD+NNLVD LE + TL MLSGM DK
Sbjct: 1 MGQLLGKARLREAAQPFANLDQQGVYLLWEAFNDVAEGFGINVDELTEICMALQNTTFMHAPKQVILKIVESVFTALDTDQNNLVDSLEALVTLCMLSGMELRDK 105
BLAST of mRNA_Ecto-sp13_S_contig1408.3188.1 vs. uniprot
Match: A0A225W9G4_9STRA (Microtubule-associated protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225W9G4_9STRA) HSP 1 Score: 73.6 bits (179), Expect = 7.260e-13 Identity = 37/104 (35.58%), Postives = 61/104 (58.65%), Query Frame = 1
Query: 40 MGQKVGKASFEDVVKPFVNLPDESIRALWQEFNLCATGWGVSPKFFNQLCQAMAKSIGTETN---EITNNEFFAALDTDKNNLVDGLELMSTLGMLSGMPREDK 342
MGQ GKA++ F+NL + + LW+ FN A G+G++ F ++C++M +++ + + ++ F ALDTD+N LVD LE + T+ M+S MP K
Sbjct: 1 MGQLQGKATYVKATTSFLNLSERDVNKLWESFNDVAEGFGLNQDEFVEICRSMQQTLEIHAHSEMDHLSSALFMALDTDENGLVDALEFLGTIAMMSTMPIPQK 104
BLAST of mRNA_Ecto-sp13_S_contig1408.3188.1 vs. uniprot
Match: A0A0N7L8J5_PLAHL (Uncharacterized protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L8J5_PLAHL) HSP 1 Score: 72.8 bits (177), Expect = 1.350e-12 Identity = 39/105 (37.14%), Postives = 60/105 (57.14%), Query Frame = 1
Query: 40 MGQKVGKASFEDVVKPFVNLPDESIRALWQEFNLCATGWGVSPKFFNQLCQAMAKSIGT----ETNEITNNEFFAALDTDKNNLVDGLELMSTLGMLSGMPREDK 342
MGQ GKA++ D F+N + + LW+ FN A G+G++ F ++CQ M +S+ E ++++ F ALDTD+N LVD LE + T+ M+S M K
Sbjct: 1 MGQLQGKATYLDASTSFLNASERDVNKLWEGFNDVAEGFGLNRDEFVEICQLMQRSLDIYAHDEMDQLSG-ALFTALDTDENGLVDALEFLGTMAMISAMSTSQK 104
BLAST of mRNA_Ecto-sp13_S_contig1408.3188.1 vs. uniprot
Match: A0A3R7FYN1_9STRA (EF-hand domain-containing protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7FYN1_9STRA) HSP 1 Score: 70.5 bits (171), Expect = 8.730e-12 Identity = 38/104 (36.54%), Postives = 59/104 (56.73%), Query Frame = 1
Query: 40 MGQKVGKASFEDVVKPFVNLPDESIRALWQEFNLCATGWGVSPKFFNQLCQAMAKSIGTET-NEIT--NNEFFAALDTDKNNLVDGLELMSTLGMLSGMPREDK 342
MGQ GKA++ PF+N + + LW+ FN A G+G++ ++C++M ++ NE+ + F ALDTD+N LVD LE + T+ M+S MP K
Sbjct: 1 MGQLQGKAAYLKATTPFLNASERDVNKLWECFNDVAEGFGLNQDELVEICRSMQPTLEIHARNEMDQLSTGLFTALDTDENGLVDALEFLGTMAMMSAMPIPQK 104
BLAST of mRNA_Ecto-sp13_S_contig1408.3188.1 vs. uniprot
Match: G4ZD40_PHYSP (Uncharacterized protein n=6 Tax=Phytophthora TaxID=4783 RepID=G4ZD40_PHYSP) HSP 1 Score: 70.1 bits (170), Expect = 1.190e-11 Identity = 37/105 (35.24%), Postives = 61/105 (58.10%), Query Frame = 1
Query: 40 MGQKVGKASFEDVVKPFVNLPDESIRALWQEFNLCATGWGVSPKFFNQLCQAMAKSIG----TETNEITNNEFFAALDTDKNNLVDGLELMSTLGMLSGMPREDK 342
MGQ GKA++ PF+N + + LW+ FN A G+G+ ++C++M +++ +E ++++ F ALDTD+N LVD LE + T+ M+S MP K
Sbjct: 1 MGQLQGKAAYLKATTPFLNASERDVNKLWECFNDVAEGFGLKQDELVEICRSMQQTLEIHARSEMDQLSA-ALFTALDTDENGLVDALEFLGTMAMMSAMPVPQK 104
BLAST of mRNA_Ecto-sp13_S_contig1408.3188.1 vs. uniprot
Match: A0A1V9YLP3_9STRA (Microtubule-associated protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YLP3_9STRA) HSP 1 Score: 66.6 bits (161), Expect = 1.950e-10 Identity = 37/100 (37.00%), Postives = 54/100 (54.00%), Query Frame = 1
Query: 40 MGQKVGKASFEDVVKPFVNLPDESIRALWQEFNLCATGWGVSPKFFNQLCQAMAKSIG----TETNEITNNEFFAALDTDKNNLVDGLELMSTLGMLSGM 327
MGQ GKASF PF+N+ ++ + W+ FN A G+G++ +C + + TE IT F A+DTD+N LVD LE + +L +LS M
Sbjct: 1 MGQLHGKASFVQAALPFLNISEKDVNKCWESFNDVAEGFGINKAELIDICSPLQDTFEIKAKTEMERITA-LLFEAMDTDENGLVDALEFLGSLALLSAM 99
BLAST of mRNA_Ecto-sp13_S_contig1408.3188.1 vs. uniprot
Match: H3HDC2_PHYRM (EF-hand domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3HDC2_PHYRM) HSP 1 Score: 65.9 bits (159), Expect = 3.590e-10 Identity = 35/105 (33.33%), Postives = 60/105 (57.14%), Query Frame = 1
Query: 40 MGQKVGKASFEDVVKPFVNLPDESIRALWQEFNLCATGWGVSPKFFNQLCQAMAKSIG----TETNEITNNEFFAALDTDKNNLVDGLELMSTLGMLSGMPREDK 342
MGQ KA++ F+N + + LW+ FN A G+G++ ++C++M +++ +E ++++ F ALDTD+N LVD LE + T+ M+S MP K
Sbjct: 1 MGQLQSKAAYLKATTAFLNASERDVNKLWECFNDVAEGFGLNQDELVEICRSMQQTLEIHARSEMDQLSG-ALFTALDTDENGLVDALEFLGTMAMMSAMPIPQK 104
BLAST of mRNA_Ecto-sp13_S_contig1408.3188.1 vs. uniprot
Match: A0A8J5J1R4_9STRA (Uncharacterized protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5J1R4_9STRA) HSP 1 Score: 65.9 bits (159), Expect = 3.600e-10 Identity = 38/108 (35.19%), Postives = 62/108 (57.41%), Query Frame = 1
Query: 40 MGQKVGKASFEDVVKPFVNLPDESIRALWQEFNLCATGWGVSPKFFNQLCQAMAKSIG----TETNEITNNEFFAALDTDK---NNLVDGLELMSTLGMLSGMPREDK 342
MGQ GKA++ F+N + + LW+ FN A G+G+S ++C++M +++ +E ++++ FAALDTD+ N LVD LE + T+ M+S MP K
Sbjct: 1 MGQLQGKATYLKCTTSFLNASERDVNKLWESFNDVAEGFGLSQDELVEICRSMQQTLEIHARSEMDQLSA-ALFAALDTDEVMENGLVDALEFLGTMAMMSAMPIPQK 107 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1408.3188.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 19
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1408.3188.1 >prot_Ecto-sp13_S_contig1408.3188.1 ID=prot_Ecto-sp13_S_contig1408.3188.1|Name=mRNA_Ecto-sp13_S_contig1408.3188.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=101bp MGQKVGKASFEDVVKPFVNLPDESIRALWQEFNLCATGWGVSPKFFNQLCback to top mRNA from alignment at Ecto-sp13_S_contig1408:5519..7753- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1408.3188.1 ID=mRNA_Ecto-sp13_S_contig1408.3188.1|Name=mRNA_Ecto-sp13_S_contig1408.3188.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2235bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1408:5519..7753- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1408:5519..7753- >mRNA_Ecto-sp13_S_contig1408.3188.1 ID=mRNA_Ecto-sp13_S_contig1408.3188.1|Name=mRNA_Ecto-sp13_S_contig1408.3188.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=303bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1408:5519..7753- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |