mRNA_Ecto-sp13_S_contig1402.3139.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1402.3139.1 vs. uniprot
Match: A0A6H5KLK9_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KLK9_9PHAE) HSP 1 Score: 1302 bits (3370), Expect = 0.000e+0 Identity = 687/757 (90.75%), Postives = 702/757 (92.73%), Query Frame = 1
Query: 1 MSGNTGTVASDVLAFLTEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALHQRCTYITGCVIVRCRKGSSGLNATPLMECVNAVGAFVERCSRRGMVSRVLKATDDKDEIAGLKQRLEDLEGDFRLAGIATVGGKVEDLKA--------------QTLANHDIMFARVGISLKTLSTVPAGTPARKSWHVERRHVMRAVCDALSGEGRPRLVGLVGQSGSGKTTAAAEVVRSNEVRETFSDGVVWLTVNHGATERLRALMMHLARMVYEDIGGSVGRRPAGLDDGAAYIRQRMQSGHGGKGLKCLVVADNVWEEAVISKLLETGMWVLLSTRDEALVRSAEGGVVVGVDELSEEDAMSVLRRAAELSPELRLPDDAVELVELCGRVAMDVAFVGRWSTVRGRSDRTAWSDAADKVRSKIERSRV--NVWDVRAVRRKAVLQAGFEDLAIGSDDERIPRLYLSLAVLPDGHAFTAKDATALLYDRAPCPEDEVSTEELIRTLERWSALRTEGGAYRMHDAHSGFARDSVMDRGYVRKPAVKRWTLRISSLDVLRSFDDPFVLKGLWLAVGRLGGECWRNVRPYAAALSEMDGSNPLLLKSLQSLGWFQDAQGDWQSASATCRRILVVKRRQLGADHPHTILTLRALVYCAERLGNAEEMTEWQAELRRVLPSVVVRMQLRLDAGEVDGVDDANALNSIASTMLNLAPDDRANAEALMRRSLEIQEAKLGRDDVYVAYNLHHLGVSVHLAGRLDEA 2223
MSGNTGT+ASDVLAFLTEA XXXXXXXXXXXXXX AL+QRCTYITGCVIVRCRKGSSGL ATPLMECVNAVGAFVERCSRRGM+SRVLKATDDK+EIAGLKQRLEDLEGD RLAGIATVGGKVEDLKA QTLANHDIMFARVGIS +TL+TVPAGTPARKSWHVERRHVMRAVCDAL GEG PRLVGLVG SGSGKTTAAAE+VRS EVRE FSDG+VWL+VN GATERLRALMMHLAR+V+EDIGGSVGRRPAGLDDGAAY RQRMQSGHGGKGLKCLVVADNVWEEAVISKLLETGMWVLLSTRDEALVRSAEGGVVVGVDELSEEDAMSVLRRA+ELSPELRLPD+AVELVELCGRVAMDVAFVGRWSTVRGRSDRTAWSDAA KVRSKIERSRV NVWD+RAVRRKAVLQAGFEDLAIGSDDERIPRLYLSLAVLPDGHAFTAKDATALLYDRAPCPEDEVSTEELIRTLERWSALRTEGGAYRMHDAHSGFARD VMDRGYVRKPAVKRWTLR+SSLDVLRSFDDPFVLKGLWLAVGRLGGE WRNVRPYAAALSEMD SNPLLLKSLQSLGWFQDAQGDWQSAS TCRRIL VKRRQLGADHPHTILTLRALVYCAERLGNAEEMTEWQAELRRVLP VVRMQLRLDAGEVDGVDDANALNSIASTMLNLAPDDR NAEALMR SLEIQE KLGRDDVYVAYNLHHLGVSVHLAGRLDEA
Sbjct: 1 MSGNTGTMASDVLAFLTEASDGLPLIEPVLKTLKAVXXXXXXXXXXXXXXAALYQRCTYITGCVIVRCRKGSSGLKATPLMECVNAVGAFVERCSRRGMLSRVLKATDDKEEIAGLKQRLEDLEGDLRLAGIATVGGKVEDLKALLEHVDTKQALSHSQTLANHDIMFARVGISPETLATVPAGTPARKSWHVERRHVMRAVCDALPGEGGPRLVGLVGDSGSGKTTAAAEIVRSTEVREAFSDGIVWLSVNDGATERLRALMMHLARVVFEDIGGSVGRRPAGLDDGAAYTRQRMQSGHGGKGLKCLVVADNVWEEAVISKLLETGMWVLLSTRDEALVRSAEGGVVVGVDELSEEDAMSVLRRASELSPELRLPDEAVELVELCGRVAMDVAFVGRWSTVRGRSDRTAWSDAAHKVRSKIERSRVSDNVWDIRAVRRKAVLQAGFEDLAIGSDDERIPRLYLSLAVLPDGHAFTAKDATALLYDRAPCPEDEVSTEELIRTLERWSALRTEGGAYRMHDAHSGFARDCVMDRGYVRKPAVKRWTLRLSSLDVLRSFDDPFVLKGLWLAVGRLGGESWRNVRPYAAALSEMDESNPLLLKSLQSLGWFQDAQGDWQSASDTCRRILAVKRRQLGADHPHTILTLRALVYCAERLGNAEEMTEWQAELRRVLPLAVVRMQLRLDAGEVDGVDDANALNSIASTMLNLAPDDRGNAEALMRHSLEIQEVKLGRDDVYVAYNLHHLGVSVHLAGRLDEA 757
BLAST of mRNA_Ecto-sp13_S_contig1402.3139.1 vs. uniprot
Match: A0A6H5KRK8_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KRK8_9PHAE) HSP 1 Score: 769 bits (1986), Expect = 2.440e-263 Identity = 407/715 (56.92%), Postives = 501/715 (70.07%), Query Frame = 1
Query: 157 LHQRCTYITGCVIVRCRKGSSGLNATPLMECVNAVGAFVERCSRRGMVSRVLKATDDKDEIAGLKQRLEDLEGDFRLAGIATVGGKV---------------EDLKAQTLANHDIMFARVGISLKTL-------STVPAGTPARKSWHVERRHVMRAVCDALSGEGRPRLVGLVGQSGSGKTTAAAEVVRSNEVRETFSDGVVWLTVNHGATERLRALMMHLARMVYEDIGGSVGRRPAGLDDGAAYIRQRMQSGHGGKGLKCLVVADNVWEEAVISKLLETGMWVLLSTRDEALVRSAEGGVVVGVDELSEEDAMSVLRRAAELSPELRLPDDAVELVELCGRVAMDVAFVGRWSTVRGRSDRTAWSDAADKVRSKIERSRVNVW-----DVRAVRRKAVLQAGFEDLAIGSDDERIPRLYLSLAVLPDGHAFTAKDATALLYDRAPCPEDEVSTEELIRTLERWSALRTEGGAYRMHDAHSGFARDSVMDRGYVRKPAVKRWTLRISSLDVLRSFDDPFVLKGLWLAVGRLGGECWRNVRPYAAALSEMDGSN-PLLLKSLQSLGWFQDAQGDWQSASATCRRILVVKRRQLGADHPHTILTLRALVYCAERLGNAEEMTEWQAELRRVLPSVVVRMQLRLDAGEVDGVDDANALNSIASTMLNLAPDDRANAEALMRRSLEIQEAKLGRDDVYVAYNLHHLGVSVHLAGRLD 2217
LHQRCTYIT C IV+CR G + L+ PL +CVNAV FVER +RG +SRVLKA DK +I LK+RL DLEGD LAGIA++ + E + + NH+ + A+ L+ L + VP GTP KSWHVERR+V V AL +G P LVGLVG SG+GKTTAA+ +V S VRETFSDG+VWL VN G + L LM+ LA+MV+EDIGGSVGRRP+G DDG AY++Q++++GHGGKGLKCLVVADNVWE V+S+LLETGMW+LLSTRDE LV+ A G VV GVDELSE +A SVLRRAAELSPE RLPDDA +L+ELCGRVAMD+AFVGRWSTVRGR DRTAWSDAA KVR+++++ V D R RR+A+LQAGFEDLAIGSDDER+ RLYLSLAVLPDGHAFT KDA LLYDR P EDE S ++ LERW+ +R+ YRMHDAHS FAR+S+MDRG VR+PA+KR ISSL+ LRS + + LK LW V R+GG+ W RPY AL +D SN PL ++++++ WFQ+AQ DW A+ T RR+L V+ QLGADHP+ + T L CAE N EE EW + + LP + R Q + E G+DDA +L S+A+T++ L P +R AE L+RRSLEI+ A+L +DDV VA H LGV + AGRLD
Sbjct: 67 LHQRCTYITACFIVKCRHGYTELDVAPLEDCVNAVEKFVERYRKRGKISRVLKAVGDKGDIVQLKERLRDLEGDLSLAGIASLAKYLIADPKPCSPVAFAFQERMGKKQEGNHEELLAKTETILRQLPKPPAKVANVPKGTPTHKSWHVERRNVTETVFQALDADGGPHLVGLVGDSGAGKTTAASAIVSSIVVRETFSDGIVWLPVNEGVHDNLPCLMLQLAQMVFEDIGGSVGRRPSGSDDGLAYVKQQVENGHGGKGLKCLVVADNVWESDVVSQLLETGMWILLSTRDEELVKRANGEVV-GVDELSEAEAESVLRRAAELSPEARLPDDAKDLIELCGRVAMDLAFVGRWSTVRGRQDRTAWSDAACKVRAEMDKGGVTAESNGSEDSRVNRRRAILQAGFEDLAIGSDDERVQRLYLSLAVLPDGHAFTVKDAAVLLYDREPGTEDEASVGGVVEALERWTIIRSVEATYRMHDAHSNFARESLMDRGDVRRPAIKRLVRSISSLEALRSINR-YTLKHLWAGVQRVGGDGWATTRPYEKALEALDESNSPLFRETIEAVAWFQEAQEDWTGANRTWRRLLAVEEVQLGADHPYVLNTYHCLARCAEHQDNVEEAKEWHRKQHQALPLAMARAQSKHVGSEAAGLDDAGSLASLAATVITLHPGERGEAEMLLRRSLEIKMAELDQDDVQVAVVQHDLGVCIREAGRLD 779
BLAST of mRNA_Ecto-sp13_S_contig1402.3139.1 vs. uniprot
Match: D7FZW8_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZW8_ECTSI) HSP 1 Score: 766 bits (1978), Expect = 1.030e-262 Identity = 403/695 (57.99%), Postives = 502/695 (72.23%), Query Frame = 1
Query: 154 ALHQRCTYITGCVIVRCRKGSSGLNATPLMECVNAVGAFVERCSRRGMVSRVLKATDDKDEIAGLKQRLEDLEGDFRLAGIATVGGKVEDLKAQTLANHDIMFARVGISLKTLSTVPAGTPARKSWHVERRHVMRAVCDALSGEGRPRLVGLVGQSGSGKTTAAAEVVRSNEVRETFSDGVVWLTVNHGATERLRALMMHLARMVYEDIGGSVGRRPAGLDDGAAYIRQRMQSGHGGKGLKCLVVADNVWEEAVISKLLETGMWVLLSTRDEALVRSAEGGVVVGVDELSEEDAMSVLRRAAELSPELRLPDDAVELVELCGRVAMDVAFVGRWSTVRGRSDRTAWSDAADKVRSKIER-----SRVNVWDVRAVRRKAVLQAGFEDLAIGSDDERIPRLYLSLAVLPDGHAFTAKDATALLYDRAPCPEDEVSTEELIRTLERWSALRTEGGAYRMHDAHSGFARDSVMDRGYVRKPAVKRWTLRISSLDVLRSFDDPFVLKGLWLAVGRLGGECWRNVRPYAAALSEMDGSNPLLLKSLQSLGWFQDAQGDWQSASATCRRILVVKRRQLGADHPHTILTLRALVYCAERLGNAEEMTEWQAELRRVLPSVVVRMQLRLDAGEVDGVDDANALNSIASTMLNLAPDDRANAEALMRRSLEIQEAKLGRDDVYVAYNLHHLGVSVHLAGRLDEA 2223
AL QRCTYIT C +V+CR S ++ PL +CV A F ERCSRRG VSRV+KA DK EIAGL ++ L D LAGIA + GKV+D+K +TL D + S L+ VP G P RKSWHVERRH M V DAL+G R +V L G SGSGKTT AAE+VRS EVRE FSDG+VWL VN GA +RL +LM+ LARMV+E+IGGSVGR P+ +D A YI+QR++ GH G+ LKCLVVADNVWEE V+SKL+ETGMWVLLSTRDEA+V+ + G VV VDELS+ DA SVL+RAAEL E RLPDDAV+L++LCGRVAMDVAFVGRWSTVRGR D +WSDAA +R+++E+ + ++ A RRKA+LQ GFEDLAIGSDDER+ RLYLSLAV+PDGHAF+ KDA LLYDR+P EDE S ++ LERWS +R+ G YRMHDAH+ FAR+ ++DRG+VR+PA+KRWT +SSLD+LRS D +VLKGLWLA+ RLGG+ W RPY AL M S+ LL + +++GWFQ+AQ D + ASA+ RR+L V++R+LGADHP + T L AERLGN EE +W + LP + RM + +G +DDA++L+S+A+T L P DRA AE L+RRSL+++EA LG + + VA L LGVS AGRLDEA
Sbjct: 66 ALEQRCTYITACFVVKCRLIESEVDVAPLKDCVEAAKNFAERCSRRGKVSRVIKAFSDKSEIAGLNSSVDRLTTDLGLAGIAVLEGKVDDMK-KTLDRIDQRLESLPRSFGKLAAVPMGAPVRKSWHVERRHAMATVLDALNGSDRACVVALAGYSGSGKTTVAAEIVRSTEVREAFSDGIVWLPVNEGAKKRLPSLMLQLARMVHEEIGGSVGRVPSASEDSATYIKQRLEEGHKGRRLKCLVVADNVWEEDVVSKLVETGMWVLLSTRDEAVVKRSRGKAVV-VDELSQADAESVLKRAAELPRESRLPDDAVDLIKLCGRVAMDVAFVGRWSTVRGRHDPASWSDAASTIRTEMEKVGHDPDNDSAENIPAKRRKAILQGGFEDLAIGSDDERVQRLYLSLAVMPDGHAFSLKDAAVLLYDRSPSTEDEASAGGVVDVLERWSIIRSAQGTYRMHDAHTDFARECLLDRGHVRRPALKRWTRYLSSLDILRS-TDRYVLKGLWLAIERLGGDGWGKTRPYEKALGMMLESDALLRTTAEAVGWFQEAQEDLEGASASWRRLLEVEKRELGADHPFVLNTYGNLAIWAERLGNIEEAAKWHEKEVEGLPLALARMNALVRSGLEADLDDADSLSSVAATALEFRPGDRALAETLLRRSLDVKEAILGPEHLQVADTLRQLGVSAREAGRLDEA 757
BLAST of mRNA_Ecto-sp13_S_contig1402.3139.1 vs. uniprot
Match: A0A6H5KYW3_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KYW3_9PHAE) HSP 1 Score: 691 bits (1784), Expect = 9.910e-235 Identity = 361/585 (61.71%), Postives = 441/585 (75.38%), Query Frame = 1
Query: 490 LSTVPAGTPARKSWHVERRHVMRAVCDALSGEGRPRLVGLVGQSGSGKTTAAAEVVRSNEVRETFSDGVVWLTVNHGATERLRALMMHLARMVYEDIGGSVGRRPAGLDDGAAYIRQRMQSGHGGKGLKCLVVADNVWEEAVISKLLETGMWVLLSTRDEALVRSAEGGVVVGVDELSEEDAMSVLRRAAELSPELRLPDDAVELVELCGRVAMDVAFVGRWSTVRGRSDRTAWSDAADKVRSKIER-----SRVNVWDVRAVRRKAVLQAGFEDLAIGSDDERIPRLYLSLAVLPDGHAFTAKDATALLYDRAPCPEDEVSTEELIRTLERWSALRTEGGAYRMHDAHSGFARDSVMDRGYVRKPAVKRWTLRISSLDVLRSFDDPFVLKGLWLAVGRLGGECWRNVRPYAAALSEMDGSNPLLLK-SLQSLGWFQDAQGDWQSASATCRRILVVKRRQLGADHPHTILTLRALVYCAERLGNAEEMTEWQAELRRVLPSVVVRMQLRLDAGEVDGVDDANALNSIASTMLNLAPD--DRANAEALMRRSLEIQEAKLGRDDVYVAYNLHHLGVSVHLAGRLDE 2220
L+ VP GTPARKSW+V+RRHVM V + L+ +G PRLVGLVG SGSGKTT A+E VRS EV+E FSDG+ WL+VN GA ERL +LM+ LAR+VYEDIG SVGRRP DD AAYIRQRM+ G GGK LKCLVVADNVWE+ V+SKLLETGMWVLLSTR+ LV A G VV GVDELSE DAMSVLRRAAEL P+ ++P DAV+L+ELCGRVAMD+AFVGRWSTVRGR DR AWSDA KVR ++ + + + + R RRKA+L+AGFEDLAIGSDDER+ RLYLSLAV PDGHAFT +DA LLYDR PC EDE S ++ TLERW+ LR+E GAYRMHDAHS FAR+++MD GYVR+PAVKRW IS L+VLRS DP+VLKGLWLAV +GG+ W R Y+AAL MD + L + ++ +L Q+A DW+ AS T RR+L ++++QLGADH H + + R+L CAE+LG E +W+ + LP + R+Q + D+G+V+G+D AN L S+ASTML P DRA AE L+RRSLEIQEA LG +D+ VA L+ LG+ + AGRL+E
Sbjct: 33 LTKVPKGTPARKSWYVKRRHVMDTVFEGLASDGGPRLVGLVGGSGSGKTTVASESVRSTEVQEAFSDGIAWLSVNDGAKERLSSLMLQLARVVYEDIGCSVGRRPTSSDDCAAYIRQRMKKGTGGKKLKCLVVADNVWEKEVVSKLLETGMWVLLSTRNITLVTEAHGEVV-GVDELSEADAMSVLRRAAELPPQGKIPGDAVDLIELCGRVAMDLAFVGRWSTVRGRQDRMAWSDAVSKVREEMGKVGSGDASEKLAETRDARRKAILRAGFEDLAIGSDDERVQRLYLSLAVFPDGHAFTVRDAAVLLYDREPCAEDEASVAVVVDTLERWTVLRSEQGAYRMHDAHSIFARETLMDHGYVRRPAVKRWVSSISCLEVLRS-SDPYVLKGLWLAVEGVGGDGWLKSRAYSAALVGMDRLHSALARQNIIALARLQEAHEDWEGASTTWRRLLEIEKKQLGADHYHVLKSYRSLASCAEQLGQVGEAADWRGKEVEALPLALARVQSQTDSGKVEGLDGANGLASVASTMLKFKPGSIDRAQAEVLLRRSLEIQEAALGHEDIAVADTLYQLGICLREAGRLEE 615
BLAST of mRNA_Ecto-sp13_S_contig1402.3139.1 vs. uniprot
Match: D7FZY7_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZY7_ECTSI) HSP 1 Score: 652 bits (1682), Expect = 4.660e-218 Identity = 355/609 (58.29%), Postives = 438/609 (71.92%), Query Frame = 1
Query: 157 LHQRCTYITGCVIVRCRKGS-SGLNATPLMECVNAVGAFVERCSRRGMVSRVLKATDDKDEIAGLKQRLEDLEGDFRLAGIATVGGKVEDLKAQT--------------LANHDIMFARVGISLKTLSTVPAGTPARKSWHVERRHVMRAVCDALSGEGRPRLVGLVGQSGSGKTTAAAEVVRSNEVRETFSDGVVWLTVNHGATERLRALMMHLARMVYEDIGGSVGRRPAGLDDGAAYIRQRMQSGHGGKGLKCLVVADNVWEEAVISKLLETGMWVLLSTRDEALVRSAEGGVVVGVDELSEEDAMSVLRRAAELSPELRLPDDAVELVELCGRVAMDVAFVGRWSTVRGRSDRTAWSDAADKVRS---KIERSRVN--VWDVRAVRRKAVLQAGFEDLAIGSDDERIPRLYLSLAVLPDGHAFTAKDATALLYDRAPCPEDEVSTEELIRTLERWSALRTEGGAYRM---------HDAHSGFARDSVMDRGYVRKPAVKRWTLRISSLDVLRSFDDPFVLKGLWLAVGRLGGECWRNVRPYAAALSEMDGSNPLLLKSLQSLGWFQDAQGDWQSASATCRRILVVKRRQLGADHPHTILTLRAL 1896
L++RC Y+T CV+V+ R+ S S ++ TP+ EC+ A G VERC RG ++RVL A+ DK+EIA +K + DLE D LAG+A + GK DL A LAN + + R+ + L+ +P TP RKSWHVER +VM V +AL+ G P LVGLVG SGSGKTTAA+E+VRSNEVR+ FSDGVVWLTVNHGA +RL +LM+ LA M+ E++GG RRPA DDGAAYI+++MQ GHGGKGLKCLVVADNVWE+ V+ KLLETGMWVLLSTRDE LV +EG VV GVDE+SE +A SVLR+A+EL PE RLPDDAV+L+ELCGRVAMD+AFVGRWSTVRGRSDRTAWSDAA KVR+ KIE RV+ V + R RRKAVLQAGFEDLA GSDDER+ RLYLSLAVLPDG FT KDA LLYDR P EDE S ++ LERWS LR+ G YRM HDAHS FAR+ +MDRG VR+PA+ RWT ISSLD LRS V + LWL V ++GG+ W++ RPY AAL+ M+ S+PLL S+ ++ FQ + DW+ A ATCRR+L + ++G P+++ +R+L
Sbjct: 74 LYRRCVYLTACVVVKSRQSSCSEMDLTPVEECLEAAGELVERCGGRGKMTRVLNASSDKEEIARMKANIRDLEADLSLAGVAILEGKTSDLTAMVERMGTNQAATQEMILANTESIIDRLSKTPAKLAKIPKATPIRKSWHVERLYVMERVFEALTAVGGPHLVGLVGDSGSGKTTAASEIVRSNEVRQAFSDGVVWLTVNHGAKDRLPSLMLQLAHMMCEEVGG---RRPATSDDGAAYIKEKMQRGHGGKGLKCLVVADNVWEKEVVWKLLETGMWVLLSTRDEELVVGSEGEVV-GVDEMSEVEAESVLRKASELPPETRLPDDAVDLIELCGRVAMDLAFVGRWSTVRGRSDRTAWSDAAGKVRAEMGKIEGERVSGTVVETRDARRKAVLQAGFEDLASGSDDERVQRLYLSLAVLPDGRGFTVKDAAVLLYDRKPSAEDEASAAGVVEILERWSVLRSIRGCYRMAWRGGHYVLHDAHSDFAREKLMDRGDVRRPALVRWTRNISSLDTLRSVRWHDV-RDLWLGVEQVGGDGWKSTRPYEAALAGMEDSDPLLPTSVVAVAKFQRHEEDWEEAIATCRRLLDMPVTKVG---PYSLSVIRSL 674
BLAST of mRNA_Ecto-sp13_S_contig1402.3139.1 vs. uniprot
Match: A0A6H5KJ30_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ30_9PHAE) HSP 1 Score: 545 bits (1404), Expect = 1.580e-177 Identity = 338/736 (45.92%), Postives = 426/736 (57.88%), Query Frame = 1
Query: 157 LHQRCTYITGCVIVRCRKGS-SGLNATPLMECVNAVGAFVERCSRRGMVSRVLKATDDKDEIAGLKQRLEDLEGDFRLAGIATVGGKVEDLKAQT--------------LANHDIMFARVGISLKTLSTVPAGTPARKSWHVERRHVMRAVCDALSGEGRPRLVGLVGQSGSGKTTAAAEVVRSNEVRETFSDGVVWLTVNHGATERLRALMMHLARMVYEDIGGSVGRRPAGLDDGAAYIRQRMQSGHGGKGLKCLVVADNVWEEAVISKLLETGMWVLLSTRDEALVRSAEGGVVVGVDELSEEDAMSVLRRAAELSPELRLPDDAVELVELCGRVAMDVAFVGRWSTVRGRSDRTAWSDAADKVRSKIERS-----RVNVWDVRAVRRKAVLQAGFEDLAIGSDDERIPRLYLSLAVLPDGHAFTAKDATALLYDRAPCPEDEVSTEELIRTLERWSALRTEGGAYRM---------HDAHSGFARDSVMDRGYVRKPAVKRWTLRISSLDVLRSFDDPFVLKGLWLAVGRLGGECWRNVRPYAAALSEMDGSNP------------------LLLKSLQSLGWFQDAQGDWQSASATCRRILVVKRRQLGADHPHTILTLRALVYCAERLGNAEEMTEWQAELRRVLPSVVVRMQLRLDAGEVDGVDDANALNSIASTMLNLAPDDRANAEALMRRSLEIQEAKLGRDDVYVAYNLHHLGVSVHLAGRLDEA 2223
L++RC ++T CVIV+ R+ S S ++ +P+ EC+ A G VERC RG ++RVL A+ DKD+IA +K + DLE + LAG+A + GK DL+A LAN +I+ R+ + + +P TP KSWHVER V+ V + L+ +G P LVGLVG SGSGKTTAA+E+VRSNE +RL +LM+ LA MVYE+IGG RRPA DDG AYI++RM GHGG+GLKCL V DNVWE+ V+ +LLE GMWVLLSTRDE LV EG VV V+ELSE +A SVLR+AAEL PE RLPDDAV+L+ELCGRVAMD+AF GR STVRGRSDRTAWS AA KVR+++ + R V + R RRKAV+QAGF DLAIGSDDER+ RLYLSLAVLPDG FT KDA L+YDR P EDE S ++ LERWSAL + G YRM HDAHS FAR+ +MDRG V +PA+ RWT ISS+D LR+ V + LWL ++GG+ W+ RPY AAL+ ++ S+P +++SL LG G + A R LV+ LG H TL L C G + +A+ L P E L+ R LEI EA D +VA L LG + AGR+D+A
Sbjct: 48 LYRRCVFLTTCVIVKSRQSSFSEMDVSPVEECLEAAGELVERCGGRGKMTRVLNASSDKDQIARMKANIRDLEANLSLAGVAILEGKTSDLRATVERMAKIQAATQEVILANTEIITDRLSKTPAKPAKIPKSTPIWKSWHVERFDVVERVFEPLTADGGPPLVGLVGDSGSGKTTAASEIVRSNE-------------------DRLPSLMLQLAHMVYEEIGG---RRPATSDDGTAYIKERMHRGHGGEGLKCLGVVDNVWEKEVVCELLEAGMWVLLSTRDEELVTGWEGEVVE-VNELSEVEAESVLRKAAELPPETRLPDDAVDLIELCGRVAMDLAFGGRLSTVRGRSDRTAWSKAASKVRTEMSKGECEGVRGTVVETRDARRKAVVQAGFGDLAIGSDDERVQRLYLSLAVLPDGRRFTVKDAAVLIYDRMPSAEDEASAAGVVEILERWSALCSIRGCYRMAWRGSHYVLHDAHSDFAREKLMDRGDVCRPALVRWTRNISSVDTLRAVRWHEV-RDLWLGAEQVGGDGWKITRPYEAALAGLEDSDPHRPTLLDMPVTKVRPYSLSVIRSLHELGLGYKHAGCLEEAEEVLRGCLVIGGTLLGFTHVTVAKTLD-LSGCVRAAGQFAQAXXXXXRC-------------------------------LATREAKLGPRGLVETEELLARRLEIVEASTALDHEHVADVLFDLGRCMRQAGRMDKA 727
BLAST of mRNA_Ecto-sp13_S_contig1402.3139.1 vs. uniprot
Match: A0A6H5J759_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J759_9PHAE) HSP 1 Score: 531 bits (1369), Expect = 5.490e-177 Identity = 313/590 (53.05%), Postives = 374/590 (63.39%), Query Frame = 1
Query: 154 ALHQRCTYITGCVIVRCRKGSSGL--NATPLMECVNAVGAFVERCSRRGMVSRVLKATDDKDEIAGLKQRLEDLEGDFRLAGIATVGGKVEDLKAQTLANHDIMFARVGISLKTLSTVPAGTPARKSWHVERRHVMRAVCDALSGEGRPRLVGLVGQSGSGKTTAAAEVVRSNEVRETFSDGVVWLTVNHGATERLRALMMHLARMVYEDIGGSVGRRPAGLDDGA-AYIRQRMQSGHGGKGLKCLVVADNVWEEAVISKLLETGMWVLLSTRDEALVRSAEGGVVVGVDELSEEDAMSVLRRAAELSPELRLPDDAVELVELCGRVAMDVAFVGRWSTVRGRSDRTAWSDAADKVRSKIERSRVN--VWDVRAVRRKAVLQAGFEDLAIGSDDERIPRLYLSLAVLPDGHAFTAKDATALLYDRAPCPEDEVSTEELIRTLERWSALR-TEGGAYRMHDAHSGFARDSVMDRGYVRKPAVKRWTLRISSLDVLRSFDDPFVLKGLWLAVGRLGGECWRNVRPYAAALSEMDGSNPLLLKSLQSLGWFQDAQGDWQSASATCRRILVVKR---RQLGADHPHTILTLRAL 1896
AL +RCTY+T C+I + R G N +PL +CV FVER +R M V + E+ LAN +I+ R+ + VP GTP RKSWHVER HV V +AL+GE PRLVGLVG SG+GKTTAAAE+VRSN VRE+FSDG+VWLTVN+GA +RL +LM+ LARMV EDIGG VG P A AYI+QRM++GHGGKGLKCL VADNVWE+ V+S LL+TGM VLLSTR E LV A G V V +DELS DA SVLR AAEL P +RLPDDAV+L++LCGRVAMD+AFVGRWSTVRGR DR AWSDAA KVR++I + + V R RRKA+LQAG EDLAIGSDDER+ RLYLSLAVLPD DA LLYDR P EDE S ++ LERWS LR T Y MHD S FAR S+MDRG VR+ A++RW ISSLD +RS++ + LK WL V ++GGE W P AL+EMD PLL +S+ ++ +A DW+ AS R L V + L D H LRAL
Sbjct: 17 ALEKRCTYMTACIIAKFRHAHPGSAPNVSPLEDCVMEAEKFVERRKKRTMEQMVQNQAAARKEL---------------------------------LANQEIIIDRLPKPPIKKAYVPQGTPTRKSWHVER-HVTETVVEALTGEAGPRLVGLVGDSGAGKTTAAAELVRSNVVRESFSDGIVWLTVNYGANKRLPSLMLQLARMVQEDIGGRVGGHPNESGGNADAYIKQRMENGHGGKGLKCLAVADNVWEKEVVSMLLKTGMTVLLSTRHEELVTGARG-VPVRLDELSARDAESVLRSAAELPPAVRLPDDAVDLIDLCGRVAMDLAFVGRWSTVRGRHDRVAWSDAAAKVRAEIAKIEGDDIVDGARGNRRKAILQAGLEDLAIGSDDERVQRLYLSLAVLPDDQGIQVHDAALLLYDRDPTAEDEESVARVLDVLERWSVLRSTWAYKYYMHDVQSEFARASLMDRGDVRRHALRRWVGYISSLDTVRSYNADY-LKHQWLDVEKVGGEGWDETHPCETALAEMDDPEPLLQESIAAVAKAHEAHEDWEKASTIWHRSLGVSTWWGQSLDGDDEHRFRALRAL 570
BLAST of mRNA_Ecto-sp13_S_contig1402.3139.1 vs. uniprot
Match: D8LFN6_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFN6_ECTSI) HSP 1 Score: 402 bits (1033), Expect = 4.050e-123 Identity = 258/639 (40.38%), Postives = 356/639 (55.71%), Query Frame = 1
Query: 154 ALHQRCTYITGCVIVRCRKGSSG-LNATPLMECVNAVGAFVERCSRRGMVSRVLKATDDKDEIAGLKQRLEDLEGDFRLAGIATVGGKVEDLKAQT--LANHDIMFARVGISLKTLSTVPAGTPARKSWHVERRHVMRAVCDALSGEGRPRLVGLVGQSGSGKTTAAAEVV------------------RSNEVRETFSDGVVWLTVNHG--ATERLRALMMHLARMVYEDIGGSVGRRPAG--LDDGAAYIRQRMQSGHGGKGLK-CLVVADNVWEEAVISKLLETGMWVLLSTRDEALVRSAEGGVVVGVDELSEEDAMSVLRRAAELSPELRLPDDAVELVELCGRVAMDVAFVGRWSTVRGRSDRTAWSDAADKVRSKIE------RSRVNVWDVRAVRRKAVLQAGFEDLAIGSDDERIPRLYLSLAVLPDGHAFTAKDATALLYDRAPCPEDEVSTE------ELIRTLERWSALRTEGGAYRMHDAHSGFARDSVMDRGYVRKPAVKRWTLRISSLDVLRSFDDPFVLKGLWLAVGRLGGECWRNVRPYAAALSEMDGSNPLLLKSLQSLGWFQDAQGDWQSASATCRRILVVKRRQLGADHPHTILTLRALVYCAERLGNAEEMTEWQAEL 1956
AL +RCTY+T CVIV+ R+ SS +N PL CVNA F+ RCSRRG+ R KA+ D DE+ L R++ L GD LAGIA++ KV+DLKA + + M A V ++ VP G P SWHV R V+ AV + LS P++VGLVG+SGSGKTT AA +V R N VRE F DGVVWL V G + ER+ ALM LA+ V+ED+ S G P G+A+I ++ G K CLVVAD+VWE ++ +L TGMWVL ++RD LV EG VV VD+LS+ +A +LR AAELS LP A +++E C R+A + FVGRWSTV+G D W++A + +++ ++ + D+ V+R A+L+AGF DLA + P LYLSLAV+PDG AF AK+A L+D E+ S +++ LE+W+ + G +RMHDAHS FAR+ + VR A++RW S LD +RS D F + LW A +GGE WR RPY AL + S+P + SL+++ F + W+ R+L V++ +H TL +L++CA L + + EL
Sbjct: 109 ALEERCTYVTACVIVKWRQTSSSEMNVAPLESCVNAAEDFIARCSRRGLCGRCTKASSDNDELLTLNSRVDSLTGDLGLAGIASLDAKVDDLKAMLAEVIAQNTMPASVPVA-----AVPNGKPVEHSWHVARDRVVDAVYEHLSCGQTPQVVGLVGRSGSGKTTCAASIVGESTGRRHQNETGDQMLRRLNRVREHFRDGVVWLRVGRGGGSAERVPALMSQLAKTVFEDLKHSYGFAPGASPTGGGSAFISDFVRGKGSAAGRKRCLVVADDVWEVDILEELRHTGMWVLFTSRDPDLVERVEGSVVP-VDQLSKAEAECLLRGAAELSTGSSLPSAAAQVIERCDRMANRLEFVGRWSTVKGSDDEEDWAEAVSAIDAEMSAMAGEANAQKSDEDLSGVKRVAILRAGFLDLAAQNGFN--PLLYLSLAVMPDGRAFGAKEAAVFLFD--DWAEERASQRRTRQAAKVVANLEQWAVVTMHGNLFRMHDAHSDFARNKLKRSEDVRASALRRWRGFTSRLDTIRSMDY-FEMVDLWHATEMIGGESWRVSRPYHVALDSLRDSSPECIPSLKAVVEFGINECAWEVTHDVALRLLRVQK-DAAVEHAEVRHTLESLIHCANALNLNSDADAHRREL 735
BLAST of mRNA_Ecto-sp13_S_contig1402.3139.1 vs. uniprot
Match: A0A6H5L0N2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0N2_9PHAE) HSP 1 Score: 347 bits (891), Expect = 1.040e-99 Identity = 297/904 (32.85%), Postives = 391/904 (43.25%), Query Frame = 1
Query: 223 LNATPLMECVNAVGAFVERC-SRRGMVSRVLKATDDKDEIAGLKQRLEDLEGDFRLAGIATV-GGKVEDLK----------AQTLANHDIMFARVGISLKTLSTVPAGTPARKSWHVERR----HVMRAVCDALSG--------------------------EGRPRLVGLVGQSGSGKTTAAAEVVRSNEVRETFSDGVVWLTVNHGA--TERLRALMMHLARMVYEDIG--GSVGRRPAGLDDGAAYIRQRMQ---------------------------------------------------SGHGG----KGLKCLVVADNVWEEAVISKLLETGMWVLLSTRDEALVRSAEGGVVVGVDELSEEDAMSVLRRAAELSPELRLPDDAVELVELCGRVAMDVAFVGRWSTVRGRSDRTAWSDAADKVRSKIE-----------RSRVNV--------------------------------------------------------------WDVRAVRRKAVLQAGFEDLA--IGSDDERIPRLYLSLAVLPDGHAFTAKDATALLYD--RAPCPEDEVST-----------------EELIRTLERWSALRTEGG------------AYRMHDAHSGFARDSVMDRGYVRKPAVKRWTLRISSLDVLRSFDDPFVLKGLWLAVGRLGGECWRNVRPYAAALSEMDGSNPLLLKSLQSLGWFQDAQGDWQSASATCRRILVVKRRQLGADHPHTILTLRALVYCAERLGNAEEMTEWQAELRRVLPSVVVRMQL------RLDAGEVD-------------------------GVDDANALNSIASTMLNLAPDDRANAEALMRRSLEIQEAKLGRDDVYVAYNLHHLGVSVHLAGRLDE 2220
L+ PL ECV A+G V R +RR + R ++ KDEIA L R+ D + LAGI V G +ED + L ++ AR + VP+ P R+SWHV R V+R++ A G E PR+VGLVG+SG+GKT AAE+VR EV E FSDGVVWL VN G +RL +LM LAR++YE++G G P G GHGG + L+CLV DNV E V++ L ETG+WVLL+TRD ++ GG V + L E DA VLRRA+EL + P A EL+ELCGR +D+AFVGRWSTV G D AW +AAD +R+++ RS V V R +RKA+L+AGF DL G DD R+ LYLSLAVLPDGH FT KDA LL+ A C + V+ ++R LE L GG ++RMH+AHS FAR+ ++D + AV RW +SSLD + FD PF L LW AV +GG+ WR+ RPY AL +D +PL L ++ F+ A+GDW AS RR+L V++R A P+ + + LV AE G EE W+ R L +V+ + D+G D A+ L S+A ++ P AE ++RR+LEI+ A+ G DD VA L LGV V AGRL E
Sbjct: 165 LDVGPLRECVEALGFLVGRKDARRRTLLRRSGSSSIKDEIADLNGRVLDAAREMGLAGILAVFKGVLEDTGGGYGSSPGGISDVLTQQEVDLARQPKRSPPRARVPSLLPRRESWHVRRELVIGTVLRSLLSAPGGSNSRXXXXXXXXXXXXXXXXXXXXXXEAGPRVVGLVGESGTGKTATAAEIVRGPEVLEYFSDGVVWLPVNEGDGDRDRLPSLMKRLARIMYEEVGIKHGFGAPPVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGHGGPRQRRPLRCLVAVDNVCEAEVVATLAETGVWVLLTTRDWDVIPRV-GGKPVVIGRLLETDADWVLRRASELPGDEPPPAGARELIELCGRTVLDLAFVGRWSTVCGSKDPMAWRNAADSIRAELNNLELTREDDDARSSVTVAGKVXXXXXXXXXXXXXXXXXXXXXXIEDGAPASVITGSEXXXXXXXXXXXXXXXXXXXXXXXHGRESQRKAILRAGFRDLVSVAGDDDSRL--LYLSLAVLPDGHEFTVKDAAVLLHGDGSARCGDGIVAAAGGRGXXXXXXXXXXXXRRVLRVLEARGILTASGGRGGRRRSASSPSSFRMHEAHSAFAREILLDCPKILGWAVGRWVGFLSSLDAVLFFD-PFALARLWSAVEDVGGKGWRDGRPYETALEAIDNYDPLCRVCLVAVAKFRGAEGDWDGASLMWRRLLTVEQR---AQEPNVMYPVWELVNAAENGGKPEEAAAWRRYGRETLNLAMVKSTMVPPETGARDSGXXXXXXXXXXXXXXXXXXXXXXXXXPKRSADTASVLRSLALNIVRFGPSHGVEAEMMLRRALEIEVARRGPDDPQVAVTLGRLGVCVRQAGRLKE 1061
BLAST of mRNA_Ecto-sp13_S_contig1402.3139.1 vs. uniprot
Match: A0A6H5KU40_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU40_9PHAE) HSP 1 Score: 326 bits (835), Expect = 4.410e-94 Identity = 252/752 (33.51%), Postives = 382/752 (50.80%), Query Frame = 1
Query: 157 LHQRCTYITGCVIVRCRKGSSGLNATPLMECVNAVGAFVERCSRRGMVSRVLKATDDKDEIAGLKQRLEDLEGDFRLAG-------IATVGGKVEDLKAQT----------LANHDIMFARVGISLK-----TLSTVPAGTPARKS-------W----HVERRHVMRAVCDALSGEGRPRLVGLVGQSGSGKTTAAAEVVRSNEVRETFSDGVVWLTVNHGATE--RLRALMMHLARMVYEDIGGSVGRRP-----AGLDDGAAYIRQRMQSGHGGKGLKCLVVADNVWEEAVISKLLETGMWVLLSTRDEALVRSAEGGVVVGVDELSEEDAMSVLRRAAELSPELRLPDDAVELVELCGRVAMDVAFVGRWSTVRGRSDRTAWSDAADKVRSKIERS------RVNVWDVRAVRRKAVLQAGFEDLAIGSDDERIPRLYLSLAVLPDGHAFTAKDATALLYDRAPCPEDEVSTEELIRTLERWSALRTEG--GAYRMHDAHSGFARD---SVMDRGY---VRKPAVKRWTLRISSLDVLRSFDDPFVLKGLWLAVGRLGGECWRNVRPYAAALSEMDGSNPLLLKSLQSLGWFQDAQGDWQSASATCRRILVVKRRQLGAD-HPHTILTLRALVYCAERL-------GNAEEMTEWQAELRRVLPSVVVRMQLRLDAGEVDGVDDANALNSIASTMLNLAPDDRANAEALMRRSLEIQEAK-LGRDDVYVAYNLHHLGVSVHLAGRLDEA 2223
L++ C IT V+V+C G + ++ TPL ECV+ + A V SRRG+ S+ D + I L +R+E+L LA + V VEDL+ Q LA H+ M +++ L +PA R W HV RRHV+ VC+ P +V LVG+SG+GKT+ A+E+ +RE F DG+VW+ GA + RL M LA V+ED+ +G P A AAYI+ RM+ G+ G+GLKCLVVAD+VWE V+ L ++GM L+++RD L A GG V +D ++EE+ M +L++AA+L P++A ++++LC VAM++ FVGR S +R + D T W A +++RS+I + W + RR + + G++D GS D R LYLSL +LP+G+AF DA+ LL+ D + +++ LERW+ +R E G YRMHDAHS FAR S + G+ VR+ AV+RW+ +S L + S D +L LW AV + + VR Y A L +D S+ + +++ A+GD A+ +++ R + + HP + + + RL G AE+ + EL R + +++ L+ A +V +DA L+S + L D R +E RR+L+ E L V ++Y LH LG AGR +EA
Sbjct: 35 LYELCEVITCFVVVKCDGGRNNIDVTPLSECVDDLEALVADYSRRGLCSKF--CNPDSEVIEQLGKRIENLVHVMELAATVVVSEQVGGVNAAVEDLRRQLEINWARNECLLAKHETMLEECTKNIERGIKSVLQQLPAPQAERDQAPEPKGVWKPEDHVIRRHVVARVCEYFDSANSPWMVALVGRSGAGKTSTASEMALHYHLRERFPDGIVWMRCGQGAADSARLARQMFILATWVHEDVENKLGISPSAAVAAAEGTAAAYIKTRMEQGNAGRGLKCLVVADDVWEPEVLDMLRQSGMKALITSRDYELTE-ASGGKAVVMDHVTEEEGMLILQKAAKLRSGESPPNEARKILDLCNYVAMELNFVGRLSMLRSQVDGTQWLRAWNEIRSEIGAEVSDPGGDFDDW-AASKRRDVIFRVGYKDF--GSGDVRNKILYLSLGILPNGYAFRVSDASLLLFGACQ-GRDMENAGDVVADLERWAVVRLESSDGTYRMHDAHSEFARKILTSALGLGFAADVRELAVRRWSAHLSCLKTVLSLDVGLLLS-LWQAVDTVSCDVGIRVRSYRAQLCSIDSSDEVYFSFAKTIAQLYYAEGD--DANVVDISQIMLDRSDMAREVHP------KFVAFATWRLWDKLPSHGGAEK----EQELIRRMDALMDEENLQRWAPQVGDGEDAEWLHSCGLCLYRL--DRREESETYFRRALQAWECLGLSAPQVQLSYTLHCLGRLAREAGRPEEA 764 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1402.3139.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1402.3139.1 >prot_Ecto-sp13_S_contig1402.3139.1 ID=prot_Ecto-sp13_S_contig1402.3139.1|Name=mRNA_Ecto-sp13_S_contig1402.3139.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=824bp MSGNTGTVASDVLAFLTEASDGLPFIEPVLKTLKTVREKVATLKNNREELback to top mRNA from alignment at Ecto-sp13_S_contig1402:13643..17228+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1402.3139.1 ID=mRNA_Ecto-sp13_S_contig1402.3139.1|Name=mRNA_Ecto-sp13_S_contig1402.3139.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3586bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1402:13643..17228+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1402:13643..17228+ >mRNA_Ecto-sp13_S_contig1402.3139.1 ID=mRNA_Ecto-sp13_S_contig1402.3139.1|Name=mRNA_Ecto-sp13_S_contig1402.3139.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=2472bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1402:13643..17228+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |