mRNA_Ecto-sp13_S_contig1396.3087.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig1396.3087.1
Unique NamemRNA_Ecto-sp13_S_contig1396.3087.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1396.3087.1 vs. uniprot
Match: A0A6H5L5R1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5R1_9PHAE)

HSP 1 Score: 419 bits (1078), Expect = 4.970e-141
Identity = 298/412 (72.33%), Postives = 311/412 (75.49%), Query Frame = 1 
Query:    1 MNGELFFDRYISDPL------------TVGGYKADLRLYVVVTSLHPMSVSVYRDGIVRFATS-----KYVGSPHHDLFGHLTNCSINKRSPFASREKDVIGGGCKWTLRRLQSWVEESSAHGVERWDRLWAKIRSLVCLTVLPLADVVPGGVGHDSCFELFGFDVMVDSRLSSRPHLIEVNCSPALGLDEPADREVKLPLISDLLDLVDMESACLAQEATRATRISKARSMPGYSRPLLVSRAPAPSSSAASCLPPPRGAELQLXXXXXXQRPPWLDHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCVGSSSESPVGFGFETVFPFSPESADHASRLSKYTGAGKDRETKVQG 1185
            MNGEL FDR + +P             T+G     +  ++  TSL P+S  + R        S     +YVGSPHHDLFGHLTNCSINKRSPFAS+EKDVIGGGCKWTLRRL+ WVEESSAHGVERWDRLWAKIRSLVCLTVLPLADVVPGGVGHDSCFELFGFDVMVDSRLS RPHLIEVNCSPALGLDEPADREVKLPLISDLLDLVD+ESACLAQEATRATRISKARSMP YSRPLLVS  P PSS+AASCLPPPRGAELQL      QRPPWLD        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX         Y         XXXXXXXXXXXX     XXXXXXXXXX           FGFE VFPFS ESADHA RLSKYTGAGKDRETK  G
Sbjct:    1 MNGELVFDRKLVEPANTPLLTRARLVRTIGTEHFHIG-HIGSTSL-PLSFPLTRAHTSPLYFSWPVFARYVGSPHHDLFGHLTNCSINKRSPFASQEKDVIGGGCKWTLRRLRRWVEESSAHGVERWDRLWAKIRSLVCLTVLPLADVVPGGVGHDSCFELFGFDVMVDSRLS-RPHLIEVNCSPALGLDEPADREVKLPLISDLLDLVDIESACLAQEATRATRISKARSMPSYSRPLLVSPTPTPSSAAASCLPPPRGAELQLLPPRASQRPPWLDRHHLQHQNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKELQTPAEYTPSAVQNGGXXXXXXXXXXXXHVDTEXXXXXXXXXXXXXXXXXXXX-FGFEMVFPFSTESADHARRLSKYTGAGKDRETKGWG 408
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BLAST of mRNA_Ecto-sp13_S_contig1396.3087.1 vs. uniprot
Match: D7G9A9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9A9_ECTSI)

HSP 1 Score: 358 bits (920), Expect = 5.240e-121
Identity = 172/178 (96.63%), Postives = 174/178 (97.75%), Query Frame = 1 
Query:    1 MNGELFFDRYISDPLTVGGYKADLRLYVVVTSLHPMSVSVYRDGIVRFATSKYVGSPHHDLFGHLTNCSINKRSPFASREKDVIGGGCKWTLRRLQSWVEESSAHGVERWDRLWAKIRSLVCLTVLPLADVVPGGVGHDSCFELFGFDVMVDSRLSSRPHLIEVNCSPALGLDEPADR 534
            MNGEL FDRYISDPLTVGGYKADLRLYVVVTSLHPM+VSVYRDGIVRFATSKYVGSPHHDLFGHLTNCSINKRSPFAS+EKDVIGGGCKWTLRRLQ WVEESSAHGVERWDRLWAKIRSLVCLTVLPLADVVPGGVGHDSCFELFGFDVMVD RLS RPHLIEVNCSPALGLDEPADR
Sbjct:    1 MNGELDFDRYISDPLTVGGYKADLRLYVVVTSLHPMTVSVYRDGIVRFATSKYVGSPHHDLFGHLTNCSINKRSPFASQEKDVIGGGCKWTLRRLQRWVEESSAHGVERWDRLWAKIRSLVCLTVLPLADVVPGGVGHDSCFELFGFDVMVDCRLS-RPHLIEVNCSPALGLDEPADR 177
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BLAST of mRNA_Ecto-sp13_S_contig1396.3087.1 vs. uniprot
Match: A0A7S1CGP1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CGP1_9STRA)

HSP 1 Score: 189 bits (480), Expect = 6.900e-53
Identity = 105/202 (51.98%), Postives = 131/202 (64.85%), Query Frame = 1 
Query:   25 RYISDPLTVGGYKADLRLYVVVTSLHPMSVSVYRDGIVRFATSKYVGSPHHDL---FGHLTNCSINKRSPFASREKDVIGGGCKWTLRRLQSWVE-ESSAHGVERWDRLWAKIRSLVCLTVLPLADVVPGGVGHDSCFELFGFDVMVDSRLSSRPHLIEVNCSPALGLDEPADREVKLPLISDLLDLVDMESACLAQEATRA 618
            RYI  PLT+GGYK DLR+YV+VTS  P++  +YR+G+VRF T KY G    DL   +GHLTN SINK S     EKDVIG GCKWTL  L   +E E    G     R+W + R+LV  T+L L  VVP    + SCFEL GFDVM+D  L  +P LIEVNCSPALG+D   D E+K PL+SD ++++  ++   AQ A RA
Sbjct:   74 RYIDRPLTLGGYKLDLRIYVLVTSCAPLTAYLYREGLVRFGTEKYDGGSDSDLSNLYGHLTNASINKHSGTYDTEKDVIGAGCKWTLTSLFRRLEGEGRDMG-----RVWERTRTLVMCTLLALPGVVPA---NPSCFELLGFDVMLDEAL--KPWLIEVNCSPALGIDCAVDEEIKYPLLSDTMEVLSHDAHRRAQAAARA 265
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BLAST of mRNA_Ecto-sp13_S_contig1396.3087.1 vs. uniprot
Match: A0A0L0HRH0_SPIPD (Uncharacterized protein n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0HRH0_SPIPD)

HSP 1 Score: 183 bits (465), Expect = 2.180e-49
Identity = 94/202 (46.53%), Postives = 133/202 (65.84%), Query Frame = 1 
Query:   25 RYISDPLTVGGYKADLRLYVVVTSLHPMSVSVYRDGIVRFATSKYVGSPHHDLFGHLTNCSINKRSPFASREKDVIGGGCKWTLRRLQSWVEESSAHGVERWDRLWAKIRSLVCLTVLPLADVVPGGVGHDSCFELFGFDVMVDSRLSSRPHLIEVNCSPALGLDEPADREVKLPLISDLLDLVDMESACLAQEATRATRIS 630
            RYIS+P+ + GYK D+R YVVV S +P+ V + ++GI RFATS Y  +   +++ HLTN SINK SP  S EKD +G GC+WTL +L++W E     GV+ ++++W KI+ ++ LT+LP+A  VP  +    CFEL+GFD+M+D  L  RPHL+EVN  PAL LD   D E+K PLI D+++LV++           A  IS
Sbjct:  164 RYISNPMLISGYKFDIRCYVVVRSYNPLVVYLNQEGIARFATSVYTTTELSNVYAHLTNTSINKFSPSLSHEKDEVGSGCRWTLGKLRTWFE---GMGVD-FEKIWRKIQGIILLTLLPVAVEVP--LVPAGCFELYGFDIMLDENL--RPHLLEVNFGPALSLDTDVDVEIKKPLIEDIINLVEISDEQARMAVNHALGIS 357
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BLAST of mRNA_Ecto-sp13_S_contig1396.3087.1 vs. uniprot
Match: B3S701_TRIAD (Uncharacterized protein (Fragment) n=1 Tax=Trichoplax adhaerens TaxID=10228 RepID=B3S701_TRIAD)

HSP 1 Score: 179 bits (454), Expect = 6.760e-49
Identity = 89/183 (48.63%), Postives = 127/183 (69.40%), Query Frame = 1 
Query:   28 YISDPLTVGGYKADLRLYVVVTSLHPMSVSVYRDGIVRFATSKYVGSPHHDLFGHLTNCSINKRSPFASREKDVIGGGCKWTLRRLQSWVEESSAHGVERWDRLWAKIRSLVCLTVLPLADVVPGGVGHDSCFELFGFDVMVDSRLSSRPHLIEVNCSPALGLDEPADREVKLPLISDLLDLV 576
            YI++PL + GYK DLRLYVVVTS HP++V VYR+G+VRF+T K+     ++++ HLTN SINK  P  S++KD++G GCKWT  +L +++   + +  +    +W KI +LV LT+L  A  VP      +CFEL+GFDV++D  L  +P L+EVN SPAL  D  AD EVK+PL++DL D++
Sbjct:  157 YITNPLLISGYKFDLRLYVVVTSFHPLTVYVYREGLVRFSTDKFNLLCLNNVYSHLTNTSINKHGPSYSKDKDIVGPGCKWTFSQLWNYLHNRNINSND----IWLKINTLVILTLLTQAPTVPQ---VSNCFELYGFDVLIDENL--KPWLLEVNFSPALSFDCQADLEVKMPLLNDLFDIL 330
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BLAST of mRNA_Ecto-sp13_S_contig1396.3087.1 vs. uniprot
Match: UPI001D07D978 (probable tubulin polyglutamylase TTLL2 n=1 Tax=Chrysoperla carnea TaxID=189513 RepID=UPI001D07D978)

HSP 1 Score: 179 bits (455), Expect = 1.690e-47
Identity = 95/186 (51.08%), Postives = 125/186 (67.20%), Query Frame = 1 
Query:   25 RYISDPLTVGGYKADLRLYVVVTSLHPMSVSVYRDGIVRFATSKYVGSPHHDLFGHLTNCSINKRSPFASREKDVIGGGCKWTLRRLQSWVEESSAHGVERWDRLWAKIRSLVCLTVLPLADVVPGGVGHDSCFELFGFDVMVDSRLSSRPHLIEVNCSPALGLDEPADREVKLPLISDLLDLVDM 582
            RYI  PL +GGYK DLRLYV V S HP+++ +YR+G+VRF T K+  S  ++ F HLTN SINK  P  S  K+ IG GCKWT+R+L+ + + +   G+  W  LW +I  LV LT+L  A ++P  V   +CFE FGFDV++DS +  RP L+EVN SPALG D  AD EVK PL+ DL DL+ +
Sbjct:  164 RYIEKPLLIGGYKFDLRLYVCVPSYHPLTIYLYREGLVRFGTDKFTLSDLNNPFRHLTNSSINKMGPGYSEVKERIGSGCKWTIRQLRRYFQHA---GMMDW-LLWQRIACLVVLTILSHAPLIPQTV---NCFEFFGFDVLLDSEM--RPWLLEVNLSPALGNDCQADEEVKRPLLHDLFDLMGL 340
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BLAST of mRNA_Ecto-sp13_S_contig1396.3087.1 vs. uniprot
Match: A0A7S3BR10_9VIRI (Hypothetical protein (Fragment) n=1 Tax=Prasinoderma singulare TaxID=676789 RepID=A0A7S3BR10_9VIRI)

HSP 1 Score: 177 bits (448), Expect = 4.170e-47
Identity = 107/245 (43.67%), Postives = 148/245 (60.41%), Query Frame = 1 
Query:   25 RYISDPLTVGGYKADLRLYVVVTSLHPMSVSVYRDGIVRFATSKYVGSPHHDLFGHLTNCSINKRSPFA-SREKDVIGGGCKWTLRRLQSWVEESSAHGVERWDRLWAKIRSLVCLTVLPLADVVPGGVGHD---SCFELFGFDVMVDSRLSSRPHLIEVNCSPALGLDEPADREVKLPLISDLLDL----------VDMESACLAQEA---TRATRISKARSMPGYSRPLLVSRAPAPSSSAAS 708
            +YI+ P  +GGYK DLRLYV+V+S+HP+ V +Y DG+ RF+T KY GS H DLF HLTN SIN+ +     R KD IG G KWTLRRL + ++ + A      D LW++I+++V LT+LPL    P  V  D    CFEL+GFD+M+D  L  RP L+EVN SPAL  D   D  VKLPLI D +++          ++  +A  AQEA   ++  + S  R++    R  +++RA   +   AS
Sbjct:   47 KYIA-PKLIGGYKFDLRLYVLVSSVHPLCVYLYGDGLARFSTEKYAGSAHTDLFAHLTNASINRHNEGELRRHKDTIGSGAKWTLRRLLAHLKANGADV----DALWSRIKAIVALTLLPL----PAAVSRDLSAPCFELYGFDIMLDEAL--RPWLLEVNMSPALAADSAVDDLVKLPLIRDTVNVLRVVPDPVAAIERAAAKAAQEAAENSQGGKRSAERALANTGRAAVLTRARPSAQRTAS 280
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BLAST of mRNA_Ecto-sp13_S_contig1396.3087.1 vs. uniprot
Match: A0A369RNL7_9METZ (Putative tubulin polyglutamylase TTLL2 n=1 Tax=Trichoplax sp. H2 TaxID=287889 RepID=A0A369RNL7_9METZ)

HSP 1 Score: 179 bits (454), Expect = 1.130e-46
Identity = 89/183 (48.63%), Postives = 127/183 (69.40%), Query Frame = 1 
Query:   28 YISDPLTVGGYKADLRLYVVVTSLHPMSVSVYRDGIVRFATSKYVGSPHHDLFGHLTNCSINKRSPFASREKDVIGGGCKWTLRRLQSWVEESSAHGVERWDRLWAKIRSLVCLTVLPLADVVPGGVGHDSCFELFGFDVMVDSRLSSRPHLIEVNCSPALGLDEPADREVKLPLISDLLDLV 576
            YI++PL + GYK DLRLYVVVTS HP++V VYR+G+VRF+T K+     ++++ HLTN SINK  P  S++KD++G GCKWT  +L +++   + +  +    +W KI +LV LT+L  A  VP      +CFEL+GFDV++D  L  +P L+EVN SPAL  D  AD EVK+PL++DL D++
Sbjct:  176 YITNPLLISGYKFDLRLYVVVTSFHPLTVYVYREGLVRFSTDKFNLLCLNNVYSHLTNTSINKHGPSYSKDKDIVGPGCKWTFSQLWNYLHNRNINSND----IWLKINTLVILTLLTQAPTVPQ---VSNCFELYGFDVLIDENL--KPWLLEVNFSPALSFDCQADLEVKMPLLNDLFDIL 349
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BLAST of mRNA_Ecto-sp13_S_contig1396.3087.1 vs. uniprot
Match: A0A8B8FT80_9HEMI (probable tubulin polyglutamylase TTLL2 n=3 Tax=Sipha flava TaxID=143950 RepID=A0A8B8FT80_9HEMI)

HSP 1 Score: 179 bits (453), Expect = 1.450e-46
Identity = 95/199 (47.74%), Postives = 132/199 (66.33%), Query Frame = 1 
Query:    7 GELFFD------RYISDPLTVGGYKADLRLYVVVTSLHPMSVSVYRDGIVRFATSKYVGSPHHDLFGHLTNCSINKRSPFASREKDVIGGGCKWTLRRLQSWVEESSAHGVERWDRLWAKIRSLVCLTVLPLADVVPGGVGHDS-CFELFGFDVMVDSRLSSRPHLIEVNCSPALGLDEPADREVKLPLISDLLDLVDM 582
            GEL +D      +Y+ +P+ +GGYK DLRLYV+V S HP+++ +YR+G+ RF+T KY  +   +LF HLTN SINK  P  S  K+ IG GCKWTL++L+ ++ +S   G+  W  LW KI  LVCLT+   +     G+ + S CFEL+GFDV+VDS L  +P L+EVN SPALG D   D +VK PL+ D+ DL+ +
Sbjct:  164 GELVYDTNIVVQKYVKNPMLIGGYKYDLRLYVLVPSFHPLTIYMYREGLTRFSTDKYSLNNLDNLFAHLTNSSINKLGPNYSETKEKIGLGCKWTLQQLRQYIRQS---GINDW-LLWQKISVLVCLTLA--SQCTSKGIPNTSNCFELYGFDVLVDSDL--KPWLLEVNLSPALGNDCDVDNQVKRPLLHDMFDLLGL 354
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BLAST of mRNA_Ecto-sp13_S_contig1396.3087.1 vs. uniprot
Match: A0A6J0BUR6_NEOLC (probable tubulin polyglutamylase TTLL2 n=6 Tax=Diprioninae TaxID=410274 RepID=A0A6J0BUR6_NEOLC)

HSP 1 Score: 176 bits (446), Expect = 7.170e-46
Identity = 92/186 (49.46%), Postives = 123/186 (66.13%), Query Frame = 1 
Query:   25 RYISDPLTVGGYKADLRLYVVVTSLHPMSVSVYRDGIVRFATSKYVGSPHHDLFGHLTNCSINKRSPFASREKDVIGGGCKWTLRRLQSWVEESSAHGVERWDRLWAKIRSLVCLTVLPLADVVPGGVGHDSCFELFGFDVMVDSRLSSRPHLIEVNCSPALGLDEPADREVKLPLISDLLDLVDM 582
            RYI +PL +GGYK DLRLYV V S  P+++ +Y++G+VRFAT K+      + F HLTNCS+NK  P  S +K+ +G GCKWTLR+L+ ++E+S   G   W  LW +I  LV LT+L  A  +P      +CFE FGFDV++D  L  +P LIEVN SPALG D   D EVK PL+ D+ DL+ +
Sbjct:  162 RYIKNPLLIGGYKFDLRLYVCVPSYKPLTIYLYKEGLVRFATEKFSLDNLDNPFRHLTNCSLNKLGPGYSEKKERVGAGCKWTLRQLRRYLEQS---GYSDWF-LWQRIACLVSLTILSQAAGIPRS---SNCFEFFGFDVLIDENL--KPWLIEVNVSPALGNDCEVDSEVKKPLLHDMFDLLGL 338
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1396.3087.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L5R1_9PHAE4.970e-14172.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G9A9_ECTSI5.240e-12196.63Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S1CGP1_9STRA6.900e-5351.98Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A0L0HRH0_SPIPD2.180e-4946.53Uncharacterized protein n=2 Tax=Spizellomyces TaxI... [more]
B3S701_TRIAD6.760e-4948.63Uncharacterized protein (Fragment) n=1 Tax=Trichop... [more]
UPI001D07D9781.690e-4751.08probable tubulin polyglutamylase TTLL2 n=1 Tax=Chr... [more]
A0A7S3BR10_9VIRI4.170e-4743.67Hypothetical protein (Fragment) n=1 Tax=Prasinoder... [more]
A0A369RNL7_9METZ1.130e-4648.63Putative tubulin polyglutamylase TTLL2 n=1 Tax=Tri... [more]
A0A8B8FT80_9HEMI1.450e-4647.74probable tubulin polyglutamylase TTLL2 n=3 Tax=Sip... [more]
A0A6J0BUR6_NEOLC7.170e-4649.46probable tubulin polyglutamylase TTLL2 n=6 Tax=Dip... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1396contigEcto-sp13_S_contig1396:121..4727 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score362.5
Seed ortholog evalue2.9e-97
Seed eggNOG ortholog2880.D7G9A9
Preferred nameTTLL2
Model size1338
KEGG koko:K16600
Hectar predicted targeting categoryother localisation
Exons8
EggNOG free text desc.protein polyglycylation
EggNOG OGsKOG2157@1,KOG2157@2759
Ec32 ortholog descriptiontubulin-tyrosine ligase
Ec32 orthologEc-03_004300.1
Cds size1338
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko04812
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1396.3087.1prot_Ecto-sp13_S_contig1396.3087.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig1396 121..4727 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462744.7496245-CDS-Ecto-sp13_S_contig1396:120..1971681462744.7496245-CDS-Ecto-sp13_S_contig1396:120..197Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1396 121..197 +
1681462744.761957-CDS-Ecto-sp13_S_contig1396:643..7211681462744.761957-CDS-Ecto-sp13_S_contig1396:643..721Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1396 644..721 +
1681462744.7717862-CDS-Ecto-sp13_S_contig1396:1068..12061681462744.7717862-CDS-Ecto-sp13_S_contig1396:1068..1206Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1396 1069..1206 +
1681462744.781592-CDS-Ecto-sp13_S_contig1396:1571..17481681462744.781592-CDS-Ecto-sp13_S_contig1396:1571..1748Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1396 1572..1748 +
1681462744.7914443-CDS-Ecto-sp13_S_contig1396:2097..21601681462744.7914443-CDS-Ecto-sp13_S_contig1396:2097..2160Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1396 2098..2160 +
1681462744.800952-CDS-Ecto-sp13_S_contig1396:2827..30501681462744.800952-CDS-Ecto-sp13_S_contig1396:2827..3050Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1396 2828..3050 +
1681462744.8106177-CDS-Ecto-sp13_S_contig1396:3453..38731681462744.8106177-CDS-Ecto-sp13_S_contig1396:3453..3873Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1396 3454..3873 +
1681462744.8205147-CDS-Ecto-sp13_S_contig1396:4565..47271681462744.8205147-CDS-Ecto-sp13_S_contig1396:4565..4727Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1396 4566..4727 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig1396.3087.1

>prot_Ecto-sp13_S_contig1396.3087.1 ID=prot_Ecto-sp13_S_contig1396.3087.1|Name=mRNA_Ecto-sp13_S_contig1396.3087.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=446bp
MNGELFFDRYISDPLTVGGYKADLRLYVVVTSLHPMSVSVYRDGIVRFAT
SKYVGSPHHDLFGHLTNCSINKRSPFASREKDVIGGGCKWTLRRLQSWVE
ESSAHGVERWDRLWAKIRSLVCLTVLPLADVVPGGVGHDSCFELFGFDVM
VDSRLSSRPHLIEVNCSPALGLDEPADREVKLPLISDLLDLVDMESACLA
QEATRATRISKARSMPGYSRPLLVSRAPAPSSSAASCLPPPRGAELQLPP
PRASQRPPWLDHHHLQHQNQHRKQQRTAAPKTTTPRPPSLPLTRPPPPAP
PPLKERQTPAEYTPNAAQNGGGSGGGGSDGSSQNVETGASGGGGGGGGCV
GSSSESPVGFGFETVFPFSPESADHASRLSKYTGAGKDRETKVQGCVRAI
IAEIKSHEKRQLVHLKGLSHRRGGGGEGGGESRRANGGTSSRNRS*
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mRNA from alignment at Ecto-sp13_S_contig1396:121..4727+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig1396.3087.1 ID=mRNA_Ecto-sp13_S_contig1396.3087.1|Name=mRNA_Ecto-sp13_S_contig1396.3087.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4607bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1396:121..4727+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGAACGGTGAACTGTTCTTCGACAGGTACATTTCTGACCCGCTCACCGT
CGGCGGGTACAAGGCGGACTTGCGATTGTGAGTTTCTTCTCGGAGATGCC
TCGTGCCAGCAGATATCTCCTATGCTACTTAGTGCTATAGTCTAGACCCA
GTGTACCAGTTCACACACCAGGATAATTGATATACCGCGCGTGCTTTAAG
ACGGCGAATGCCGACATCTGCTCGTCTTGAAGGATCGTTTTTTTTTCACC
GATCTCGTTATCGTGTCTGATGAAGCCCATTTCCCGAACACGGCTAGCCC
ACAAATGTTCGCTATGCTCGAACTTCGAAAATTTTCGCATTGGATGTACG
GAGCTTGTGAAGCCAGCCAATACGCCAATCCTCACTCGAGCCTGACTCGT
CCGTACGATAGGGACGGACAGTTTTTACATCGGCCGTATTGGCAGTACCG
CCCTTCCGCTTTCGTTTCCCCTTGGACGCGCACACACATCGCCACCCTAC
TTTTCTTGGCCCGTATTTGCCAGGTACGTGGTGGTGACCTCGCTGCACCC
GATGAGCGTGTCGGTGTACAGGGACGGCATCGTTCGCTTCGCCACCTCGA
AGTGAGTGCGACAACCTGAATGCAAACGAGAAAAAACAACCAACACATTA
TTTCCCGTCCGTAGCACGTCTTTCTGCCAACAAGATGGCTAGCGAAGCAC
GAGAGACTTCGGACGTTGGTGGCGCGGAGAATCTTCTGCTATTGCTTCTT
CATCGACAAGAGCGAGGCAGAAAAATTGTGTCGGAGGTTTGCAAAGGCAG
ATGGGAACGCAAAAGTGTGCGTGATGTCTGGGGGTCTTCTTGCGACACCG
ATCTCCCTCTCAACCACAATGCCTGCTGCTGCTGCTGCTGCTTTTGCTTG
TGCTGCTGCTGCTGCTGCTGCTGCTGCTGTTTGGTGTTGACCGATAAGGT
ACGTCGGGAGCCCGCACCACGACCTCTTCGGGCACCTGACCAACTGCTCC
ATTAACAAGCGGTCGCCCTTCGCCTCTCGAGAGAAGGACGTCATCGGTGG
AGGTTGCAAGTGGACCCTCCGACGGCTCCAGAGCTGGTAAGGCTGGTCGT
GGTGCTCAGGAGACCCATCGAGCCACGCCGAAGAGCCTTTTCGTTCATGT
GCCCACCCGCCGTCGCTGCCAATGGAAAACATGACTGCTGTCAGGTTCCC
GGCTCCCCCCGTTGCTTGCCCCAGAGCCTGGTCGCATCGCTTGCCCCAAC
CCAAACATCCGAATGCTTAGCTTTAGGTTTTGTCCTCGCCGTCAATGCCG
CGGTTCCATGCCTCTGCACTGCCGTCCCTTGCCTCCACGCCGGAATGGTT
GCGCTTTCTGCTTCGGTGCAGGGGATAGCCCCTTTTAACTTACCGGTGCT
TTTCCACCTGACTGGGTGAGCCTTGCATCTGCTGTCGGTCGGCGTGTTTA
GGGTGGAGGAGTCTTCTGCTCACGGAGTGGAGCGGTGGGACCGACTGTGG
GCCAAGATCCGGTCCCTGGTGTGCCTTACCGTGCTCCCCCTGGCGGACGT
GGTTCCTGGCGGAGTAGGGCACGACAGCTGCTTCGAGCTTTTCGGATTCG
ACGTCATGGTGGACTCCAGACTCTCCAGGTGTGCCGTTGTTGATGTTTCT
GTTTCTGCTGTTTAATGTTAGGTCAGAAACAGTGGACAAACGTGGGGCAA
AATGTGGAACACACAAAACAGACAGCACGGGGTACAAGTTTTGGTGGGTA
AACGCACCGGAATTTCGGACAATACAAGGCAACCTGTGTTGAGGACTCGT
GCGCCGCGGCGATGTGTGGGCTGCAGACGTTCCCGAACATCGAGGATAAG
GCCTCATGATGAACCGCAAGTGAGAACCCCCCCGCCCGCCCGCCCCAGCG
ATTGACGTGCCCCCCCGCCTCGCCCCCGTTCGTTTATGCCGCCTCCGTCG
TCTTTGACCGTCGGCCACGATGTCAAGCAGGCCGCACCTGATAGAGGTGA
ACTGCTCTCCCGCCCTGGGGCTGGACGAGCCAGCCGACAGGTAAACAGTA
ATCCGCGTGCCAATCTTGGTCCCTGCCCCTTTTCCCTCTTCTCCTGCCCT
GGATCGGAAAAAAATCGACAGAACCCTCCCTCTGGGTGTTTAATTCGGTA
GAGAAGACAGGCTTTCATACGATGGAGGGTCGACGGCGCTCGTGGTGTCT
CCGCTCGGGCCGAGCCGGTAGATTCAAAGCGTGACGTCATCGCTCGTGTG
CGACTCCCGTTGTTACTTCCTCGGGTGTGTTGTCCCTGGATGGCGGCGGC
TCTATTGTAACCGCTCCGACTGGGTTAGGGATGACTGACTGCACCTACCA
TACATATTTTTCGCGTACGCGGCAAACCGCTCCCGGCGGCGACGCGCATG
CGTATGTAGTCCAAACGGTCACTGAACTTATGGAAAACACACACACACTT
TACACCAAGAGAAAACTAGGATGAGAAACAGATACCTTGTGTTCAAAAGA
ACTCTTCTATTCCGAAGTATTGGTGGTCGTCGAACGTAGCATCACCAGCA
GTCTCTCGGGTGTATTGCGAAGGATTCGTGACCCCAGGGAAGCGCGCACT
CCCCGTTTTCACCGGCAATCCAAAAAACTTGTCGGTATTGCACCACCGTT
GTGCTTGCATGCACGGCCGGCGATATTCGCCTCTCTTGCCGGTGATGATC
GCAAAAGAGAGGTGAAGCTTCCGCTCATCTCGGACCTGCTGGACCTCGTC
GACATGGAGTCTGCCTGCCTGGCGCAAGAGGCAACGAGGGCCACGAGGAT
CTCCAAGGCCAGGAGCATGCCCGGCTACAGCCGACCCCTTCTCGTCTCTC
GTGCTCCGGCTCCTTCGTCTTCCGCCGCTTCCTGTTTGCCGCCACCGCGC
GGGGCAGAGCTGCAGCTGCCGCCACCGAGAGTGAGAGAGGGGGAGAGAGA
GGGGGAGAGAGAGATAAGAACCTGCTGTCGAGAGCAACGTGAATAACTGC
TATTGGTAGGATTCCGTTCAAGGGGTGAAGATGTCTGGATACCACTTTAC
CGCTCTCCGTCCCATTTCTGCAATCAATGTTGTCTTTGCACGTGCGCCGT
CGTATGCACGAGTGAGAACGTCTCTCGGAAAGCATGCCTGTGATTTTCTT
GAAAGTCAGGTGCATCTCAAAAGTGGGCGATGCGGCTGTTCGCGCCGATA
TCCACCCCCGACAAAACCGGTAGGGGGAGAATGTAACTTTGTATGACGCG
CACTACGAGCTCCTCAGTTGTGCGGAAATGTTTCCGTCGCTGTCTCTCTT
TCCGAATGGCCGCCTCACTGCAACTGTTGAAAGGCCTCCCAGCGCCCCCC
TTGGTTGGACCACCACCATCTCCAACACCAGAACCAGCACCGGAAGCAAC
AACGAACTGCCGCACCGAAAACGACGACCCCGCGGCCACCATCACTGCCC
CTAACCCGCCCGCCCCCGCCGGCACCGCCACCGCTAAAGGAGCGACAAAC
ACCCGCCGAGTACACCCCCAACGCCGCACAAAACGGCGGCGGCAGTGGCG
GCGGCGGAAGCGACGGCAGCAGCCAAAACGTCGAGACCGGAGCCAGCGGC
GGCGGCGGCGGCGGCGGTGGATGCGTCGGCAGTAGTTCCGAATCTCCAGT
CGGGTTCGGGTTCGAGACGGTGTTCCCCTTCAGCCCCGAGAGCGCGGACC
ACGCGAGTCGACTGAGTAAGTACACTGGCGCCGGCAAGGACCGAGAGACC
AAGGTTTGTTCGTGGGAAAGAAATGACCTAATTCAAAGTTGGGCAGCAAC
GAAACCAAGCGTAGCGAAACACGCAGCGACAAGACTGCACAGCGCGAGCT
CGTCTGTCTGTGTCTTGTTTGGCTCACAGAACTGCTGCGATATATTCGTC
ATTGTCGATACAAACGAGCATTGGATATTTTCGCGGGGGATCGCTGGGAT
CGCTGCGTGATGTGTCGCTCACTGCATTCAGGAAGCTCAGTGGCATTTCT
CGCGATGATGACAGAGAGTAAACAGTCTGCCACCATCAATAATTTTTGTC
GTACGGAAACTCAGATGGCTGCGCCGAGCGGGAGTCAGACCGCCGAATTA
TCTTTTTACGACTTCTGCGTGTTTGAACCTTAAGCGGCAGGTTGTAGCAG
AAGACATTGACTGTGTAGGGGCTTTGCGAGAACCTCTTCCCCACCTGTGG
TCGTATCGCAATCCCCACACGCCATTGATATTGCAACGGTAAATACATCA
CCCAACTGAAACCCATTCGAACACGCACGAAGAGAACAATTAAGCAGCAA
TCGAGGCTATTGTGCCCCGACTTCCAGATTGTTTTACGTGTTTATCGTAG
ACTCCTACTACAAGAAGGACAACGTTGACACCGCCTTGGCCAGCCACCCG
CAAATTTTTCACCTCGTTCCTCATTGCGATTCATTCACGGTTCAGGTGCA
GGGGTGCGTACGCGCAATCATCGCCGAGATCAAGAGTCACGAAAAGAGAC
AGCTCGTGCATCTGAAGGGCTTATCGCACCGCAGGGGTGGGGGGGGAGAG
GGGGGGGGGGAGTCGAGGAGGGCAAACGGGGGTACAAGCAGTCGGAATCG
ATCGTGA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1396:121..4727+

>mRNA_Ecto-sp13_S_contig1396.3087.1 ID=mRNA_Ecto-sp13_S_contig1396.3087.1|Name=mRNA_Ecto-sp13_S_contig1396.3087.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1338bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1396:121..4727+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGAACGGTGAACTGTTCTTCGACAGGTACATTTCTGACCCGCTCACCGT
CGGCGGGTACAAGGCGGACTTGCGATTGTACGTGGTGGTGACCTCGCTGC
ACCCGATGAGCGTGTCGGTGTACAGGGACGGCATCGTTCGCTTCGCCACC
TCGAAGTACGTCGGGAGCCCGCACCACGACCTCTTCGGGCACCTGACCAA
CTGCTCCATTAACAAGCGGTCGCCCTTCGCCTCTCGAGAGAAGGACGTCA
TCGGTGGAGGTTGCAAGTGGACCCTCCGACGGCTCCAGAGCTGGGTGGAG
GAGTCTTCTGCTCACGGAGTGGAGCGGTGGGACCGACTGTGGGCCAAGAT
CCGGTCCCTGGTGTGCCTTACCGTGCTCCCCCTGGCGGACGTGGTTCCTG
GCGGAGTAGGGCACGACAGCTGCTTCGAGCTTTTCGGATTCGACGTCATG
GTGGACTCCAGACTCTCCAGCAGGCCGCACCTGATAGAGGTGAACTGCTC
TCCCGCCCTGGGGCTGGACGAGCCAGCCGACAGAGAGGTGAAGCTTCCGC
TCATCTCGGACCTGCTGGACCTCGTCGACATGGAGTCTGCCTGCCTGGCG
CAAGAGGCAACGAGGGCCACGAGGATCTCCAAGGCCAGGAGCATGCCCGG
CTACAGCCGACCCCTTCTCGTCTCTCGTGCTCCGGCTCCTTCGTCTTCCG
CCGCTTCCTGTTTGCCGCCACCGCGCGGGGCAGAGCTGCAGCTGCCGCCA
CCGAGAGCCTCCCAGCGCCCCCCTTGGTTGGACCACCACCATCTCCAACA
CCAGAACCAGCACCGGAAGCAACAACGAACTGCCGCACCGAAAACGACGA
CCCCGCGGCCACCATCACTGCCCCTAACCCGCCCGCCCCCGCCGGCACCG
CCACCGCTAAAGGAGCGACAAACACCCGCCGAGTACACCCCCAACGCCGC
ACAAAACGGCGGCGGCAGTGGCGGCGGCGGAAGCGACGGCAGCAGCCAAA
ACGTCGAGACCGGAGCCAGCGGCGGCGGCGGCGGCGGCGGTGGATGCGTC
GGCAGTAGTTCCGAATCTCCAGTCGGGTTCGGGTTCGAGACGGTGTTCCC
CTTCAGCCCCGAGAGCGCGGACCACGCGAGTCGACTGAGTAAGTACACTG
GCGCCGGCAAGGACCGAGAGACCAAGGTGCAGGGGTGCGTACGCGCAATC
ATCGCCGAGATCAAGAGTCACGAAAAGAGACAGCTCGTGCATCTGAAGGG
CTTATCGCACCGCAGGGGTGGGGGGGGAGAGGGGGGGGGGGAGTCGAGGA
GGGCAAACGGGGGTACAAGCAGTCGGAATCGATCGTGA
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