mRNA_Ecto-sp13_S_contig13939.3076.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig13939.3076.1 vs. uniprot
Match: D7FMA5_ECTSI (Kinesin motor domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMA5_ECTSI) HSP 1 Score: 805 bits (2080), Expect = 1.810e-278 Identity = 427/450 (94.89%), Postives = 432/450 (96.00%), Query Frame = 2
Query: 446 MAASTEGGAGDNKTAAATMEKKRQSGSGREKKRSHSSQSSQANDGRHVEGGNIAQSNAGTASSAGLATSFSEGRDRKHHRXXXXXXXGSKGATGAKANKHSTHGADTSSDTEAGGQEDKLKLLVDFIPYVGLGDATRDNMVRSILSAADAEELVGRDDYGNTLLILACQYRCKALVPLILARGGGAIDVDAVNSEGACALHFACYKDSVCAQTAVLLLERGAEPEVVEKTYGCTPLHYAAGAGDVNLCKRLIEKGAKANTWDLYQYTAVDYAKQSGAIDCVDYLEEVSAPGASSTATIKFSPGRGGIVTSSGVEASSTGFVREDSFDTVDGDDFRPQGNATGAIATGWLGMVGRQPSAFHEGFETGGEDDGEGFWGRQCDPDSGMAYYLNEKTGESMWEKDLLAQAQALRKEAGDENPSPHLQQWLRQQTHKARLIAFLGRHDPLKLMQV 1795
MAAS EGGAGDNKTAA T+EKKRQSGSGR KKRSHSSQ AND H EGGNIAQSNA TASSAGLATS S+G DRKHH XXXXXXXGSKGATGA ANKH+THGADT+SDTEAGGQEDKLKLLV+FIPYVGLGDATRDNMVRSILSAADAEELVGRDDYGNTLLILACQYRCKALVPLILARGGGAIDVDAVNSEGACALHFACYKDSVCAQTAVLLLERGAEPEVVEKTYGCTPLHYAAGAGDVNLCKRLIEKGAKANTWDLYQYTAVDYAKQSGA DCVDYLEEVSAPGASSTATIKFS GRGGIVTSSGVEASSTGFVREDSFDT DGDDFRPQGNAT AIATGWLGMVGRQPSAFHEGFETGGEDDGEGFWGRQCDPDSGMAYYLNEKTGESMWEKDLLAQAQALRKEAGDENPSPHLQQWLRQQTHKARLIAFLGRHDPLKLMQV
Sbjct: 1 MAASIEGGAGDNKTAATTVEKKRQSGSGRAKKRSHSSQ---ANDAHHGEGGNIAQSNAATASSAGLATSCSDGNDRKHHXXXXXXXXGSKGATGATANKHNTHGADTASDTEAGGQEDKLKLLVEFIPYVGLGDATRDNMVRSILSAADAEELVGRDDYGNTLLILACQYRCKALVPLILARGGGAIDVDAVNSEGACALHFACYKDSVCAQTAVLLLERGAEPEVVEKTYGCTPLHYAAGAGDVNLCKRLIEKGAKANTWDLYQYTAVDYAKQSGATDCVDYLEEVSAPGASSTATIKFSTGRGGIVTSSGVEASSTGFVREDSFDTEDGDDFRPQGNATSAIATGWLGMVGRQPSAFHEGFETGGEDDGEGFWGRQCDPDSGMAYYLNEKTGESMWEKDLLAQAQALRKEAGDENPSPHLQQWLRQQTHKARLIAFLGRHDPLKLMQV 447
BLAST of mRNA_Ecto-sp13_S_contig13939.3076.1 vs. uniprot
Match: A0A482SRH0_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SRH0_9ARCH) HSP 1 Score: 198 bits (503), Expect = 2.210e-51 Identity = 123/354 (34.75%), Postives = 184/354 (51.98%), Query Frame = 2
Query: 803 LKLLVDFIPYVGLGDATRDNMVRSILSAADAEELVGRDDYGNTLLILACQYRCKALVPLILARGGGAIDVDAVNSEGACALHFACYKDSVCAQTAVLLLERGAEPEVVEKTYGCTPLHYAAGAGDVNLCKRLIEKGAKANTWDLYQYTAVDYAKQSGAIDCVDYLEEVSAPGASSTATIKFSPGRGGIVTSSGVEASSTGFVREDSFDTVDGDDFRPQGNATGAIATGWLGMVGRQPSAFHEGFETGGEDDGEGFWGRQCDPDSGMAYYLNEKTGESMWEKDLLAQAQALRKEAGDE------------------NPSPH-----LQQWLRQQTHKARLIAFLGRHDPLKLMQV 1795
+ +L+ FIP+ G GD D++VRS LS+ E++ +D+YGNTLL+LACQYRC+ L +++ +G + +AVN+ GA LHFACY+DS A +LL+ GA P+V E YGCTPLHY AG+GD+ CK +++ GA+ N +D Y YT VDYA+++G DC ++L++ A +KF+ +++ TG GA+ + +F ET ED +W DPDSG YY++ K+GE +WE +L + A K+ +P P + L Q +ARLIAFL +HDP +L+ +
Sbjct: 104 VDVLLQFIPFYGQGDPANDSIVRSALSSLSIEDIDAKDEYGNTLLLLACQYRCEDLARIMINKGA---NPNAVNTAGASCLHFACYQDSSSLPIAKVLLQNGANPDVAESNYGCTPLHYCAGSGDLEFCKLILQYGAQINAYDYYNYTCVDYAREAGFHDCANFLQKKLDKTA-----VKFN------------QSTKTG----------------------GAL---------KATQSFRNN-ETSYED--MSYWESHVDPDSGGKYYIHTKSGECLWEAELKERINAYSKQQNFREGXXXXXXXXNLLSMKFSSPLPADKPKISEAALISQATEARLIAFLSKHDPARLVDI 403
BLAST of mRNA_Ecto-sp13_S_contig13939.3076.1 vs. uniprot
Match: A0A835YY32_9STRA (Ankyrin repeat-containing domain protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YY32_9STRA) HSP 1 Score: 168 bits (425), Expect = 8.910e-46 Identity = 87/153 (56.86%), Postives = 107/153 (69.93%), Query Frame = 2
Query: 812 LVDFIPYVGLGDATRDNMVRSILSAADAEELVGRDDYGNTLLILACQYRCKALVPLILARGGGAIDVDAVNSEGACALHFACYKDSVCAQTAVLLLERGAEPEVVEKTYGCTPLHYAAGAGDVNLCKRLIEKGAKANTWDLYQYTAVDYAKQS 1270
L DFIPY G GDA+ D VR+++ AA EEL G D YGNTLLILA QY+ L+ ILA+ IDV+AVN GACALHFAC+ S+ A L+ G++ VVE+TYGCTPLHYAAG+G V+LCK L+ GA T D + YTAVDYA+Q+
Sbjct: 1 LFDFIPYYGAGDASVDGRVRAMVQAAGQEELCGIDHYGNTLLILAAQYKAGELMHAILAKD--CIDVNAVNDAGACALHFACFSASLDVLVARALIANGSKVRVVERTYGCTPLHYAAGSGHVDLCKDLVAAGAIVATCDFHNYTAVDYARQA 151
BLAST of mRNA_Ecto-sp13_S_contig13939.3076.1 vs. uniprot
Match: D7FPK2_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPK2_ECTSI) HSP 1 Score: 177 bits (449), Expect = 2.700e-43 Identity = 119/352 (33.81%), Postives = 168/352 (47.73%), Query Frame = 2
Query: 791 QEDKLKLLVDFIPYVGLGDATRDNMVRSILSAADAEELVGRDDYGNTLLILACQYRCKALVPLILARGGGAIDVDAVNSEGACALHFACYKDSVCAQTAVLLLERGAEPEVVEKTYGCTPLHYAAGAGDVNLCKRLIEKGAKANTWDLYQYTAVDYAKQSGAIDCVDYLEEVSAPGASSTATIKFSPGRGGIVTSSGVEASSTGFVREDSFDTVDGDDFRPQGNATGAIATGWLGMVGRQPSAFHEGFETGGEDDGEGFWGRQCDPDSGMAYYLNEKTGESMWEKDLLAQAQ----ALRKEAGDEN-------------PSPHLQQWLRQQTHKARLIAFLGRHDPLKLMQV 1795
+++ ++ L +P+ G D D MV++ L++ + + R++ G+TLLILACQ+ C+ LV ILA+G + AVN+ G CALH+ C+ DS+ A LL RGAE E TYGCTPLHYAA +GD +C L+E GA+ T D Y YTAV YAK +G V+ GG G E + D+ D +G A+G G W R DP + +AYY+N++TGES WE DL A A+ + AG N P +++WL Q+ ++ L+A R DPLKLM+V
Sbjct: 58 KDETMRTLFGLVPFYGGDDGPMDQMVKATLASVRPDAIDVRNEAGDTLLILACQHGCEDLVEPILAKGA---NPTAVNAVGICALHYTCFADSLSYDAAEALLWRGAETSTAETTYGCTPLHYAASSGDAEICALLVEHGAQPKTQDYYNYTAVKYAKDAGHEHVVELF--------------------GGEEEGEGWEEVEEAYTGMDTGD---------EGEASGPTG---------------------------GLWIRHIDPQTELAYYMNDETGESWWETDLQAVAKEFLATVPATAGSVNGSKTGAVSASITLPPLGVREWLVQEQVRSWLVAIFSRADPLKLMEV 350
BLAST of mRNA_Ecto-sp13_S_contig13939.3076.1 vs. uniprot
Match: A0A7S3HTU3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HTU3_9STRA) HSP 1 Score: 176 bits (445), Expect = 7.560e-43 Identity = 111/330 (33.64%), Postives = 159/330 (48.18%), Query Frame = 2
Query: 878 LSAADAEELVGRDDYGNTLLILACQYRCKALVPLILARGGGAIDVDAVNSEGACALHFACYKDSVCAQTAVLLLERGAEPEVVEKTYGCTPLHYAAGAGDVNLCKRLIEKGAKANTWDLYQYTAVDYAKQSGAIDCVDYLEEVSAPGASSTATIKFSPGRGGIVTSSGVEASSTGFVREDSFDTVDGDDFRPQGNATGAIATGWLGMVGRQPSAFHEGFETGGEDDGEGFWGRQCDPDSGMAYYLNEKTGESMWEKDLLAQAQ---------------------ALRKEAGDENP--SPHLQQW-LRQQTHKARLIAFLGRHDPLKLMQV 1795
LSA E++ +D+YGNTLL+LACQYRC+ LV ++L +G D +AVNS GAC LHFACY++S A +LL+ GA+P+V E T+GCTPLHY AG GD+ CK L+ GA+ D Y YT VDYA ++G + +L++ + +T + SS + S +P GN+ W + DPDSG YY++ KTGE +WE +L + Q +R A E P +P + + L +Q +ARL+ F HDP +L++V
Sbjct: 2 LSALSVEDIDSQDEYGNTLLLLACQYRCEDLVRIMLNKGA---DANAVNSSGACCLHFACYRESASIGVAKILLKSGADPDVAESTFGCTPLHYCAGTGDIEFCKLLLSYGAQIGALDYYNYTCVDYASEAGMTEVAAFLQKKLSAATKAT-----------------MGQSSKNLMSPSS---------KPYGNSNTIDIANWESHI---------------------------DPDSGGKYYIHMKTGECLWESELKQRIQQYQVQVGASRDENDRAGKNDDGIRVRAASETPDKAPKISEADLIRQATQARLVVFFTTHDPSRLVEV 275
BLAST of mRNA_Ecto-sp13_S_contig13939.3076.1 vs. uniprot
Match: A0A6H5L077_9PHAE (Kinesin motor domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L077_9PHAE) HSP 1 Score: 152 bits (383), Expect = 7.040e-35 Identity = 118/391 (30.18%), Postives = 169/391 (43.22%), Query Frame = 2
Query: 791 QEDKLKLLVDFIPYVGLGDATRDNMVRSILSAADAEELVGRDDYGNTLLILACQYRCKA-----------------------------------LVPLILARGGGAIDVDAVNSEGACALHFACYKDSVCAQTAVLLLERGAEPEVVEKTYGCTPLHYAAGAGDVNLCKRLIEKGAKAN----TWDLYQYTAVDYAKQSGAIDCVDYLEEVSAPGASSTATIKFSPGRGGIVTSSGVEASSTGFVREDSFDTVDGDDFRPQGNATGAIATGWLGMVGRQPSAFHEGFETGGEDDGEGFWGRQCDPDSGMAYYLNEKTGESMWEKDLLAQAQ----ALRKEAGDEN-------------PSPHLQQWLRQQTHKARLIAFLGRHDPLKLMQV 1795
+++ ++ L +P+ G D D MV++ L++ + + R++ G+TLLILACQ+ C+ LV ILA+G + AVN+ G CALH+ C+ DS+ A LL +GAE E TYGCTPLHYAA +GD +C L+E GA+ T D Y YTAV YAK +G V+ L G E G+ E+ + G +G A+G G W R DP + +AYY+N++TGES WE DL A A+ + AG N P +++WL Q+ ++ L+A R DPLKLM+V
Sbjct: 8 KDETMRTLFGLVPFYGGDDGPMDQMVKATLASVRPDAIDVRNEAGDTLLILACQHGCEVRLVETYRLRQPHAGLKTTLCSSVLECGFHKFQALDLVEPILAKGA---NPTAVNAVGICALHYTCFADSLSYDAAEALLWKGAETSTAETTYGCTPLHYAASSGDAEICALLVEHGAQPKASNATQDYYNYTAVKYAKDAGHEHVVELL---------------------------GGEEEGEGW--EEVEEAYTGMGTGEEGEASGPTG---------------------------GLWIRHIDPQTELAYYMNDETGESWWETDLQAVAKEFLATVPATAGGVNGSKTGAVSASITLPPLGVREWLVQEQVRSWLVAIFSRADPLKLMEV 339
BLAST of mRNA_Ecto-sp13_S_contig13939.3076.1 vs. uniprot
Match: A0A7S0XEW9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XEW9_9STRA) HSP 1 Score: 135 bits (340), Expect = 4.840e-32 Identity = 63/123 (51.22%), Postives = 86/123 (69.92%), Query Frame = 2
Query: 938 ILACQYRCKALVPLILARGGGAIDVDAVNSEGACALHFACYKDSVCAQTAVLLLERGAEPEVVEKTYGCTPLHYAAGAGDVNLCKRLIEKGAKANTWDLYQYTAVDYAKQSGAIDCVDYLEEV 1306
+LACQY+C+ LV +++ +G D +AVN+ G +LHFACY++S A LLL+ GA PEV E TYGCTPLHY AG GD+ CK LI GA+ NT+D Y YT +DYA+++G I V Y +++
Sbjct: 1 LLACQYKCEDLVRIMINKGA---DPNAVNNLGVSSLHFACYRESSSINIAKLLLQFGANPEVKESTYGCTPLHYCAGTGDLPFCKLLITYGAQTNTYDFYNYTCIDYAREAGVIPLVLYFQQI 120
BLAST of mRNA_Ecto-sp13_S_contig13939.3076.1 vs. uniprot
Match: A0A2R5GRD7_9STRA (Ankyrin repeat domain-containing protein 27 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GRD7_9STRA) HSP 1 Score: 83.6 bits (205), Expect = 5.580e-13 Identity = 53/139 (38.13%), Postives = 73/139 (52.52%), Query Frame = 2
Query: 800 KLKLLVDFIPYVGLGDATRDNMVRSILSAADAEELVGRDDYGNTLLILACQYRCKALVPLILARGGGAIDVDAVNSEGACALHFACYKDSVCAQTAVLLLERGAEPEVVEKTYGCTPLHYAAGAGDVNLCKRLIEKGAK 1216
+ +L+ +P GD D ++ + AD D GNTLLI A ++ LV L RG V+A NS G ALHFACY+ S + A LLE GA+P++++ +G +PLHYAA G V L L+ AK
Sbjct: 235 RSSVLLSLVPLAETGDGEVDELLGESMKEADPATC---DAEGNTLLIKAVEFGKPGLVRAALRRGCA---VNAQNSHGFAALHFACYRSSASTKVAKRLLEAGADPDILDN-HGVSPLHYAAAEGSVALLALLLFYKAK 366
BLAST of mRNA_Ecto-sp13_S_contig13939.3076.1 vs. uniprot
Match: S5UHV7_9TELE (Cdkn2a/b (Fragment) n=11 Tax=Xiphophorus TaxID=8082 RepID=S5UHV7_9TELE) HSP 1 Score: 53.9 bits (128), Expect = 1.010e-5 Identity = 30/72 (41.67%), Postives = 41/72 (56.94%), Query Frame = 2
Query: 1085 AVLLLERGAEPEVVEKTYGCTPLHYAAGAGDVNLCKRLIEKGAKANTWDLYQYTAVDYAKQSGAIDCVDYLE 1300
A LLL RGA+P V +K+ G TPLH AA G ++ + L++ GA D +D A+Q+G D V LE
Sbjct: 2 ARLLLTRGADPNVTDKSTGATPLHDAARTGFLDTVQLLVKAGADPQARDKDNCLPIDSARQNGHTDVVAVLE 73
BLAST of mRNA_Ecto-sp13_S_contig13939.3076.1 vs. uniprot
Match: A0A7S0SWI8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SWI8_9STRA) HSP 1 Score: 55.5 bits (132), Expect = 6.080e-5 Identity = 24/52 (46.15%), Postives = 35/52 (67.31%), Query Frame = 2
Query: 803 LKLLVDFIPYVGLGDATRDNMVRSILSAADAEELVGRDDYGNTLLILACQYR 958
+ +L FIP+ G G+ + D +VR+ LS ++ RD YGNTLL+LACQY+
Sbjct: 176 MDVLFQFIPFYGQGNLSNDAIVRAALSNLSIADIDSRDAYGNTLLLLACQYK 227 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13939.3076.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig13939.3076.1 >prot_Ecto-sp13_S_contig13939.3076.1 ID=prot_Ecto-sp13_S_contig13939.3076.1|Name=mRNA_Ecto-sp13_S_contig13939.3076.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=464bp MVSSRIAPSETGENMAASTEGGAGDNKTAAATMEKKRQSGSGREKKRSHSback to top mRNA from alignment at Ecto-sp13_S_contig13939:935..4547+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig13939.3076.1 ID=mRNA_Ecto-sp13_S_contig13939.3076.1|Name=mRNA_Ecto-sp13_S_contig13939.3076.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3613bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13939:935..4547+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig13939:935..4547+ >mRNA_Ecto-sp13_S_contig13939.3076.1 ID=mRNA_Ecto-sp13_S_contig13939.3076.1|Name=mRNA_Ecto-sp13_S_contig13939.3076.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1392bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13939:935..4547+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |