mRNA_Ecto-sp13_S_contig1392.3062.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1392.3062.1 vs. uniprot
Match: D7FP34_ECTSI (Similar to neural cell expressed, developmentally down-regulated 4-like n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP34_ECTSI) HSP 1 Score: 934 bits (2414), Expect = 0.000e+0 Identity = 480/541 (88.72%), Postives = 498/541 (92.05%), Query Frame = 1
Query: 1 CRVGLTNASMTMIQGFLDYDQNFTDDYAYVSEPFEEVYPNCKFVPLSMMTVDETGVKNGSVTSFSTAFYVLWDEKGDFYDHSYYLINRQFLDMYLIPPGSSIESFTSASVDAKVPYSRLNLTTDTAFEATINHMVLSLTEFTGINDNGNKEEKDRSFSQTTITGVEHWWWGYEDYDSVEYGFFMVELSIGKFEFTSIEEVDPVDGWSIIGAIGGIWQFVVTGFGLFFVFSEKQSPDRKMRNFRKSIGKPAEFANKRLSSLNTSSRSSNHNQDVEIDASEEDLPVEWVKKQRPNGSVYYFNVMTGAKQTASPNYLDDAGGAAPPPSNSALGRIFQGNRSARLNGGPLPAGWVEGTDGDGKKYYMDTINKTTQWERPMQREHSSGGPDRRPQAVDAPMSQSRRYSHASSDNSHHSTSSQAPHHRPSLVAAGAASGVEDNPPAGDAPAPSLGAIPAAPSYRTAVHLSNRSATAAASEGGGTTHPQQQLPAPSGKTSTDSRAGARSAAAHVDAPLPHNWSKRTAPNNRTYYVNSVTKKTQWEAPL 1623
C L+ SM GFLDYDQNFTDD+AYVSEPFEEVYPNCKFVPLSMMTVDETGVKNGSVTSFSTAFYVLWDEK FYDHSYYLINRQFLDMYLIPP SSIESFTSASVDAKVPYSRLNLTTDTAFEATINHMVL +TEFTGIN+NGNK+EK RSFSQ TITGVEHWWWG EDYDSVE+GFFMVELSIGKFEFTSIEEVDPVDGWSIIGAIGGIWQFVVTGFGLFFVFSEKQSPDRKMRNFRKSIGKPAEFANKRLS LNTSSRSSN QDVEIDASEEDLPVEWVKKQRPNGS+YYFNVMTGAKQTASPN+LD+AGG+APPPSNSALGRIFQGNRSAR N GPLPAGW+EGTDGDGKKYY+DTINKTTQWERP+QREHSSGGPDRRPQAVDAPMSQSRRYSHASSDNSH L AA AASGVE NPPAG APAPS GAIPAAPSYRTAV+LSNRS+TAAASEG GTTHPQQQ PAP+G TSTDSRAGARSAA+HVDAPLP NWSKRTAP+NRTYYVNSVTKKTQWEAPL
Sbjct: 108 CFEDLSFTSMFNQTGFLDYDQNFTDDFAYVSEPFEEVYPNCKFVPLSMMTVDETGVKNGSVTSFSTAFYVLWDEKDTFYDHSYYLINRQFLDMYLIPPDSSIESFTSASVDAKVPYSRLNLTTDTAFEATINHMVLGVTEFTGINENGNKKEKQRSFSQATITGVEHWWWGAEDYDSVEFGFFMVELSIGKFEFTSIEEVDPVDGWSIIGAIGGIWQFVVTGFGLFFVFSEKQSPDRKMRNFRKSIGKPAEFANKRLSILNTSSRSSN--QDVEIDASEEDLPVEWVKKQRPNGSIYYFNVMTGAKQTASPNHLDNAGGSAPPPSNSALGRIFQGNRSARPNSGPLPAGWIEGTDGDGKKYYLDTINKTTQWERPLQREHSSGGPDRRPQAVDAPMSQSRRYSHASSDNSHXXXXXXXXXXXXXLAAASAASGVEGNPPAGGAPAPSRGAIPAAPSYRTAVYLSNRSSTAAASEGXGTTHPQQQWPAPAGTTSTDSRAGARSAASHVDAPLPQNWSKRTAPDNRTYYVNSVTKKTQWEAPL 646
BLAST of mRNA_Ecto-sp13_S_contig1392.3062.1 vs. uniprot
Match: A0A6H5JBE8_9PHAE (WW domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE8_9PHAE) HSP 1 Score: 835 bits (2156), Expect = 1.640e-298 Identity = 455/603 (75.46%), Postives = 472/603 (78.28%), Query Frame = 1
Query: 1 CRVGLTNASMTMIQGFLDYDQNFTDDYAYVSEPFEEVYPNCKFVPLSMMTVDETGVKNGSVTSFSTAFYV-------------------------------LWDEKGDFYDHSYYLINRQFLDMYLIPPGSSIESFTSASVDAKVPYSRLNLTTDTAFEATINHMVLSLTEFTGINDNGNKEEKDRSFSQTTITGVEHWWWGYEDYDSVEYGFFMVELSIGKFEFTSIEEVDPVDGWSIIGAIGGIWQFVVTGFGLFFVFSEKQSPDRKMRNFRKSIGKPAEFANKRLSSLNTSSRSSNHNQDVEIDASEEDLPVEWVKKQRPNGSVYYFNVMTGAKQTASPNYLDDAGGAAPPPSNSALGRIFQ----------------------------------------------GNRSARLNGGPLPAGWVEGTDGDGKKYYMDTINKTTQWERPMQREHSSGGPDRRPQAVDAPMSQSRRYSHASSDNSHHSTSSQAPHHRPSLVAAGAASGVEDNPPAGDAPAPSLGAIPAAPSYRTAVHLSNRSATAAASEGGGTTHPQQQLPAPSGKTSTDSRAGARSAAAHVDAPLPHNWSKRTAPNNRTY 1578
CRVGLTNA M +IQGFLDYDQNFT DYAYVSEPFEEVYPNCKFVPLSMMTVDETGVKNGSVTSFSTAFYV LWDEKG +YDHSYYLINRQFLD+YLIPPGSSIESFTSASVDAKVPYSRLNLTTDTAFEATINHMVLSLTEFTGIN NGNKEEK+RSFSQT ITGVEHWWWGYEDY+SVE+GFFMVELSIGKFEFTSIE +FVVTGFGLFFVFSE+QSPDR+ RNFRKSI KPAEFA RLSSLN S RSSN NQDVEIDAS EDLPVEWVKKQRPNGS+YYFNVMTGAKQTASPN LDDAGGAAPPPSNSAL RIFQ GNRSARLN GPLPAGWVEGT G+GK YY+DTINKTTQWERP+QREHSSGGP RRPQAVD P+SQSR YS ASS NSHHSTSSQAPHHRPSLV+A AASGVEDNPPAGDAPAPSLGAIPAAPSYRTAV+LSNRSATAAASEGGGTTHPQ TSTDS AGARSAAAHVDAPLP NWSKRTAPNNRT+
Sbjct: 145 CRVGLTNAPMIIIQGFLDYDQNFTADYAYVSEPFEEVYPNCKFVPLSMMTVDETGVKNGSVTSFSTAFYVRIPVQSAGLVVAWVDRRYNRAWVWCIRSNQVLWDEKGTYYDHSYYLINRQFLDLYLIPPGSSIESFTSASVDAKVPYSRLNLTTDTAFEATINHMVLSLTEFTGINKNGNKEEKERSFSQTAITGVEHWWWGYEDYNSVEFGFFMVELSIGKFEFTSIEV-----------------EFVVTGFGLFFVFSERQSPDRRFRNFRKSIRKPAEFAGNRLSSLNISFRSSNRNQDVEIDASGEDLPVEWVKKQRPNGSIYYFNVMTGAKQTASPNRLDDAGGAAPPPSNSALRRIFQVRKYILSTSFLFHLSCRNKERWTLSHLGSWDLSAPNVACFVLISLKGNRSARLNSGPLPAGWVEGTGGNGKNYYLDTINKTTQWERPLQREHSSGGPHRRPQAVDEPISQSRWYSQASSGNSHHSTSSQAPHHRPSLVSASAASGVEDNPPAGDAPAPSLGAIPAAPSYRTAVYLSNRSATAAASEGGGTTHPQXXXXXXXXTTSTDSGAGARSAAAHVDAPLPPNWSKRTAPNNRTW 730
BLAST of mRNA_Ecto-sp13_S_contig1392.3062.1 vs. uniprot
Match: D7FP33_ECTSI (E3 ubiquitin-protein ligase, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP33_ECTSI) HSP 1 Score: 484 bits (1245), Expect = 6.060e-162 Identity = 276/547 (50.46%), Postives = 347/547 (63.44%), Query Frame = 1
Query: 25 SMTMIQGFLDYDQNFTDDYAYVSEPFEEVYPNCKFVPLSMMTVDETGVKNGSVTSFSTAFYVLWDEKGDFYDHSYYLINRQFLDMYLIPPGSSIESFTSASVDAKVPYSRLNLTTDTAFEATINHMVLSLTEFTGINDNGNKEEKDRSFSQTTITGVEHWWWGYEDYDSVEYGFFMVELSIGKFEFTSIEEVDPVDGWSIIGAIGGIWQFVVTGFGLFFVFSEKQSPDRKMRNFRKSIGKPAEFANKRLSSLNTSSRSSNHNQDVEIDASEEDLPVEWVKKQRPNGSVYYFNVMTGAKQTASPNYLDDAGGAAPPPSNSALGRIFQ----------GNRSARLNGGPLPAGWVEGTDGDGKKYYMDTINKTTQWERPMQREHSSGGPDRRPQAVDAPMSQSRRYSHASS-DNSHHSTSSQA---PHHRPSLVAAGAASGVEDNPPAGD-APAPSLGAIPAAPSYRTAVHLSNRSATAAASEGGGTTHPQQQLPAPSGKTSTDSRAGARSAAAHVDAPLPHNWSKRTAPNNRTYYVNSVTKKTQWEAP 1620
+M +GF D F DD A + EE +P+C+ +PLS +T+DE G+ +G V SF +FY LW E D +D Y IN QFL YLI + +E SVD K+PY+R+ TT T T+NHMV+ LTEF GI+DNGN+EE+ R++SQ+T TG ++W+W E + +E+ MV++SI KFE+TSI EVDPVDGWSIIGAIGGIWQFVVTGFGLFFV+S KQSPDRKMRNFRKS+ KPA NKRLS+L SRSS NQD+E+DASEEDLP +WVKKQR NGS+YYF+ +TG KQ+ P+ L A G P S +AL RIF+ +L+G PLP GW+ TD GK Y+ DT++KTTQWERP Q SS RP+ +D PM+ +RR S+ASS DNS S+SS A PH R S AGD +P P+ G+ PAAPSY+TAV+LSNRSA AA G PLP NW +RTA NNR YYVN+VT++++WEAP
Sbjct: 123 AMVSAEGFTDDLDTFLDDNADATSAIEEEFPHCRVIPLSRLTMDEDGINSGDVDSFDASFYFLWYESADTFDPEIYPINAQFLSAYLIDVEAGVEPLEGKSVDVKLPYARIEPTTATELTTTVNHMVMGLTEFAGIDDNGNREERQRTYSQSTTTGTQNWYWTEETIE-LEFALIMVDVSIPKFEYTSIVEVDPVDGWSIIGAIGGIWQFVVTGFGLFFVYSVKQSPDRKMRNFRKSVTKPASIVNKRLSTLG--SRSSISNQDIELDASEEDLPADWVKKQRANGSIYYFHPLTGKKQSTPPDALGSARGG-PQASGTALNRIFRPAHASSGAGVSREHGQLSGDPLPPGWISRTDDSGKTYFQDTVSKTTQWERPTQHPRSSSVSSGRPEVIDMPMAHTRRGSNASSADNSRRSSSSHAHDHPHGRESA--------------AGDPSPPPAWGSFPAAPSYKTAVYLSNRSAQTAAGXXXXXXXXXXXXXXXXG------------------GPLPPNWERRTASNNRPYYVNTVTRESKWEAP 633
BLAST of mRNA_Ecto-sp13_S_contig1392.3062.1 vs. uniprot
Match: A0A6H5JZ12_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ12_9PHAE) HSP 1 Score: 376 bits (966), Expect = 7.510e-120 Identity = 242/555 (43.60%), Postives = 311/555 (56.04%), Query Frame = 1
Query: 40 QGFLDYDQNFTDDYAYVSEPFEEVYPNCKFVPLSMMTVDETGVKNGSVTSFSTAFYV------------------LWDEKGDFYDHSYYLINRQFLDMYLIPPGSSIESFTSASVDAKVPYSRLNLTTDTAFEATINHMVLSLTEFTGINDNGNKEEKDRSFSQTTITGVEHWWWGYEDYDSVEYGFFMVELSIGKFEFTSI---------EEVDPVDGWSIIGAI-GGIWQFVVTGFGLFFVFSEKQSPDRKMRNFRKSIGKPAEFANKRLSSLNTSSRSSNHNQDVEIDASEEDLPVEWVKKQRPNGSVYYFNVMTGAKQTASPNYLDDAGGAAPPPSNSALGRIFQGNRSARLNGGPLPAGWVEGTDGDGKKYYMDTINKTTQWERPMQREHSSGGPDRRPQAVDAPMSQSRRYSHASSDNSHHSTSSQAPHHRPSLVAAGAASGVEDNPPAGDAPAPSLGAIPAAPSYRTAVHLSNRSATAAASEGGGTTHPQQQLPAPSGKTSTDSRAGARSAAAHVDAPLPHNWSKRTAPNNRTYYVNSVTKKTQWEAP 1620
+GF D F DD A + EE +P+C+ PLS +T+DE G+ +G V S +FYV LW E D +D + Y IN QFL YLI + +E SVD K+PY+R+ TDT F A NHMV+ LTEF GI+DNGN+EE+ R++SQ+T TG ++W+W E YD E+ +V++SI KFE+T I EEV P W + +FVVTGFGLFFVFS KQSPDRKMRNFRKS+ KPA NKRLS+L SRSS NQD+E+D+SEEDLP +WVKKQR NGS+YYF+ +TG KQ+ P+ L AGG P S + L +IF ++ A + G+ DT+NKTTQWERP QR SS RPQ VD P++ +RR S SS N+ G ++P +P P+LG+IPAAPSYRTAVHLSNRSA AA+ PLP NW +R A N+R YYVN+VT++++WE P
Sbjct: 133 EGFTDDLDTFLDDNADATSAIEEEFPHCRVFPLSRLTIDEDGINSGDVDSLYASFYVREKKRAGQSEAASDGEQFLWYESADTFDRATYNINAQFLSTYLIDVEAGVEPLEGKSVDVKLPYARIEPITDTEFTAIANHMVVGLTEFAGIDDNGNREERQRTYSQSTTTGTQNWYWTDETYD-FEFALMIVDVSIPKFEYTFIAVSMNQRSKEEVSP---WFALPPFKDSAAEFVVTGFGLFFVFSVKQSPDRKMRNFRKSVTKPASIVNKRLSTLG--SRSSTSNQDIELDSSEEDLPADWVKKQRANGSIYYFHPLTGKKQSTPPDALGSAGGG-PQASGTVLNQIFHVSQYALVRDERPTLFRHSPPMGE---EIRDTVNKTTQWERPTQRPRSSSVSSGRPQVVDMPIAHTRRGSSTSSTNN-----PXXXXXXXXXXXXXRRDGAAEDP----SPPPALGSIPAAPSYRTAVHLSNRSAHTAAAXXXXXXXXXXXXXX------------------XXXGPLPPNWERRIASNDRPYYVNTVTRESKWEDP 650
BLAST of mRNA_Ecto-sp13_S_contig1392.3062.1 vs. uniprot
Match: D8LQB8_ECTSI (WW domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQB8_ECTSI) HSP 1 Score: 248 bits (634), Expect = 2.660e-72 Identity = 143/347 (41.21%), Postives = 212/347 (61.10%), Query Frame = 1
Query: 19 NASMTMIQGFLDYDQNFTDDYAYVSEPFEEVYPNCKFVPLSMMTVDETGVKNGSVTSFSTAFYVLWDEKG-DFYDHSYYL------INRQFLDMYLIPPGSSIESFTSASVDAKVPYSRLNLTTDTAFEATINHM---------VLSLTEFTGIN-DNGNKEEKDRSFSQTTITGVEHWWWGYEDYDSVEYGFFMVELSIGKFEFTSIEEVDPVDGWSIIGAIGGIWQFVVTGFGLFFVFSEKQSPDRKMRNFRKSIGKPAEFANKRLSSLNTSSRSSNHNQDVEIDASEEDLPVEWVKKQRPNGSVYYFNVMTGAKQTASPN--YLDDAGGAAPPPSNSALGRIFQ 1002
NAS TM + + D A ++ +E YP+C+ +P S +TV++TG++NG + F F +LWDE D +D + L IN QF++++ + +E+ DAK+PY RL+ TT + T++HM V+ +T+F I+ +G K++ R+F+Q++ + +W+ D+D E + + I KFE+TSIE+VDPVDGW+IIGAIGG+WQFVV FGLFFVFSEKQ PD+K+RNF+KS+ KPA N+ LSS N+ ++ DVEIDAS EDLP+ WVK+QR NG+ YY+N++TG + SP + A G P P ++ R F+
Sbjct: 115 NASFTMFGQYGFMEAELEADEASLA--IQEAYPHCRVLPTSKLTVNQTGIENGDINHFYAIFGLLWDEDPHDDFDPAVELASTGVSINTQFVNLFFVDVDLGVEAIGEELTDAKLPYDRLSPTTSGSMVGTMSHMKSCWATTGQVIEMTQFQPISTSSGQKQDPQRTFTQSSTSATVNWY--NPDFDE-ELAALLFNMFIPKFEYTSIEQVDPVDGWAIIGAIGGVWQFVVIAFGLFFVFSEKQLPDKKIRNFKKSVAKPASMVNRHLSSANSRDPTT---PDVEIDASNEDLPIGWVKRQRKNGTTYYYNLLTGDARENSPTEAHAVVAVGVTPAPKRRSIARAFR 453
BLAST of mRNA_Ecto-sp13_S_contig1392.3062.1 vs. uniprot
Match: A0A6H5JSI3_9PHAE (WW domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSI3_9PHAE) HSP 1 Score: 242 bits (618), Expect = 3.770e-69 Identity = 150/385 (38.96%), Postives = 219/385 (56.88%), Query Frame = 1
Query: 7 VGLTNASMTMI----QGFLDYDQNFTDDYAYVSEPFEEVYPNCKFVPLSMMTVDETGVKNGSVTSFSTAFYV------------LWDEKG-DFYDHSYYL------INRQFLDMYLIPPGSSIESFTSASVDAKVPYSRLNLTTDTAFEATINHMVLSLTEFTGIN-DNGNKEEKDRSFSQTTITGVEHWWWGYEDYDSVEYGFFMVELSIGKFEFTSIEEVDPVDGWSIIGAIGGIWQFVVTGFGLFFVFSEKQSPDRKMRNFRKSIGKPAEFANKRLSSLNTSSRSSNHNQDVEIDASEEDLPVEWVKKQRPNGSVYYFNVMTGAKQTASPN--YLDDAGGAAPPPSNSALGRIFQG--------NRSARLNGGPLPAGWVEG 1059
V L+ S+T++ QGF++ + + S +E YP+C+ +P S +TV++TG+ NG + F F V LWDE D +D + L IN QF++++ + +E+ DAK+PY+RL+ TT+ + T++HMV+ +T+F I+ +G K++ R+F+Q++ + +W Y + E + + I KFE+TSIE+VDPVDGW+IIGAIGG+WQFVV FGLFFVFSEKQ PD+K+RNF+KS+ KPA + LSS SSR DVEID S EDLP+ WVK+QR NG+ YY+N +TG + SP + A G P P ++ R F+ + SA P P G G
Sbjct: 137 VNLSRCSLTLVSTTHQGFMEAELEADE----ASLAIQEAYPHCRVLPTSKLTVNQTGIDNGDINHFYATFGVGGDGRDNASCALLWDEDPHDDFDPAVELASRGVSINTQFVNLFFVDVDLGVEAIGEELTDAKLPYNRLSPTTNGSMVGTMSHMVIEMTQFQPISTSSGEKQDPQRTFTQSSTSATVNW---YNPDFNEELAALLFNMFIPKFEYTSIEQVDPVDGWAIIGAIGGVWQFVVIAFGLFFVFSEKQLPDKKIRNFKKSVAKPASMVKRHLSSA--SSRDPTI-PDVEIDTSNEDLPIGWVKRQRKNGTTYYYNPLTGDARENSPTEAHAVVAVGVTPAPERRSIARAFRAAHNPGTSTSSSANRTRSPHPTGCAGG 511
BLAST of mRNA_Ecto-sp13_S_contig1392.3062.1 vs. uniprot
Match: A0A6H5J6H6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6H6_9PHAE) HSP 1 Score: 79.7 bits (195), Expect = 1.810e-12 Identity = 48/64 (75.00%), Postives = 51/64 (79.69%), Query Frame = 1
Query: 1378 AVHLSNRSATAAASEGGGTTHPQQQ-----LPAPSGKTSTDSRAGARSAAAHVDAPLPHNWSKR 1554
AV+LSN SAT+AASEG GTTH QQQ LPAP+G TS DSRA ARSAAAHVDAPL NWSKR
Sbjct: 283 AVYLSNGSATSAASEGEGTTHLQQQQQHKVLPAPAGTTSADSRAEARSAAAHVDAPLAPNWSKR 346
BLAST of mRNA_Ecto-sp13_S_contig1392.3062.1 vs. uniprot
Match: A0A7S0VNU4_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0VNU4_9CRYP) HSP 1 Score: 62.0 bits (149), Expect = 1.160e-7 Identity = 34/93 (36.56%), Postives = 42/93 (45.16%), Query Frame = 1
Query: 844 LPVEWVKKQRPNGSVYYFNVMTGAKQTASPNYLDDAGGAAPPPSNSALGRIFQGNRSARLNGGPLPAGWVEGTDGDGKKYYMDTINKTTQWER 1122
LP W +K+ P G Y+ N T A Q P + A PPP+ A PLP GW E D +G+ YY + KTTQWER
Sbjct: 71 LPPGWEEKRDPTGKPYFVNHQTQATQWERPTHHPSAPAQQPPPAYGAS-----------AGAAPLPPGWEEKRDANGRAYYTNHTTKTTQWER 152
BLAST of mRNA_Ecto-sp13_S_contig1392.3062.1 vs. uniprot
Match: A0A8B8DUJ1_CRAVI (E3 ubiquitin-protein ligase n=4 Tax=Crassostrea virginica TaxID=6565 RepID=A0A8B8DUJ1_CRAVI) HSP 1 Score: 61.6 bits (148), Expect = 3.050e-6 Identity = 39/108 (36.11%), Postives = 51/108 (47.22%), Query Frame = 1
Query: 835 EEDLPVEWVKKQRPNGSVYYFNVMTGAKQTASPNYLDDAGGAAPPPSNS-ALGRIFQGNRSARLNGGPLPAGWVEGTDGDGKKYYMDTINKTTQWERPMQREHSSGGP 1155
EE LP W + PNG V+Y N T P + + ++ L R N N GPLP GW E T DG+ +Y++ NKTTQW+ P R+ GGP
Sbjct: 377 EEPLPAGWAVSRAPNGRVFYINHNTRMTTWDDPRKTQNQRASVRRTGDTPTLVRRSSSNEDLLQNLGPLPPGWEERTHVDGRVFYINHNNKTTQWDDPRLRQ--LGGP 482
BLAST of mRNA_Ecto-sp13_S_contig1392.3062.1 vs. uniprot
Match: A0A8B6CWC4_MYTGA (E3 ubiquitin-protein ligase n=6 Tax=Mytilus TaxID=6548 RepID=A0A8B6CWC4_MYTGA) HSP 1 Score: 61.2 bits (147), Expect = 3.970e-6 Identity = 49/141 (34.75%), Postives = 63/141 (44.68%), Query Frame = 1
Query: 742 KPAEFANKRLSSLNTSSRSSNHNQDVEIDASEEDLPVEWVKKQRPNGSVYYFNVMTGAKQTASPNYLDDAGGAAPPPSNSALGRIFQ---GNRSARLNGGPLPAGWVEGTDGDGKKYYMDTINKTTQWERPMQREHSSGGP 1155
+P + N R +S + S SS N D EE LP W PNG V+Y + P + +GG+ S S + Q N N GPLP W E T DG+ +Y++ NKTTQWE P R GGP
Sbjct: 324 RPTQRHNHRTASASNSRDSSPANND------EEPLPPGWGMGTAPNGKVFYIDHNNKTTSWEDPRRNNRSGGSMRLHSLSDSPGVMQRPSSNEDLLQNLGPLPPSWEERTHADGRVFYINHNNKTTQWEDP--RLKKLGGP 456 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1392.3062.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1392.3062.1 >prot_Ecto-sp13_S_contig1392.3062.1 ID=prot_Ecto-sp13_S_contig1392.3062.1|Name=mRNA_Ecto-sp13_S_contig1392.3062.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=534bp MTMIQGFLDYDQNFTDDYAYVSEPFEEVYPNCKFVPLSMMTVDETGVKNGback to top mRNA from alignment at Ecto-sp13_S_contig1392:754..7441+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1392.3062.1 ID=mRNA_Ecto-sp13_S_contig1392.3062.1|Name=mRNA_Ecto-sp13_S_contig1392.3062.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=6688bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1392:754..7441+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1392:754..7441+ >mRNA_Ecto-sp13_S_contig1392.3062.1 ID=mRNA_Ecto-sp13_S_contig1392.3062.1|Name=mRNA_Ecto-sp13_S_contig1392.3062.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1602bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1392:754..7441+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |