mRNA_Ecto-sp13_S_contig13883.3034.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig13883.3034.1 vs. uniprot
Match: A0A6H5KGY0_9PHAE (PNPLA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KGY0_9PHAE) HSP 1 Score: 592 bits (1527), Expect = 1.290e-209 Identity = 308/322 (95.65%), Postives = 314/322 (97.52%), Query Frame = 1
Query: 64 MRGFRAMVALNNVLHVGAFLLPISSVLRGNTAPQSTFLPSPAGTPDPAALRRRLTLSAGFNDDGIVASPAILPPSGKPVLSFPGGGIFFWWQAGVISALQERYNLSSLDFVGASAGSLAAXXXXXXXXXXXXXXXALDLCDTNEIWTRPLGLAGVWGAMVEDWLDELLPDDADVICRDRVHLLVIGIWPRPFRRRAVSDFTSKSDLIKACMASVHIPWFMDKHFSARHRGGRFVDGSFRASREDLSLGDARPTVYFDYDEDEVMAARRGKFLSLTNQEGLLFMRQRGYDHVQTMLAEGKLDSIKEAALSVQKNTTGGLTGND 1029
MRGFRAMVALNNVLHVGAFL PISSVLRGNTAP+ST+LPSPAGTPDPAALRRRLTLSAG ND+GI+ASPA+LP SGKPVLSFPGGGIFFWWQAGVISALQERYNLSSLDFVGASAGSLAAXXXXXXXXXXXXXXXALDLCDTNEIWTRPLGLAGVWGAMVEDWLDELLPDDADVICRDRVHLLVIGIWPRPFRRRAVSDFTSKSDLIKACMASVHIPWFMDKHFSARHRGGRFVDGSFRASREDLSLGD RPTVYFDYDEDEVMAARRGKFLSLTNQEGLLFMRQRGYDHVQTMLAEGKLD IKEAAL +Q NTTGGLTG D
Sbjct: 1 MRGFRAMVALNNVLHVGAFLWPISSVLRGNTAPKSTYLPSPAGTPDPAALRRRLTLSAGSNDEGIIASPAVLPSSGKPVLSFPGGGIFFWWQAGVISALQERYNLSSLDFVGASAGSLAAXXXXXXXXXXXXXXXALDLCDTNEIWTRPLGLAGVWGAMVEDWLDELLPDDADVICRDRVHLLVIGIWPRPFRRRAVSDFTSKSDLIKACMASVHIPWFMDKHFSARHRGGRFVDGSFRASREDLSLGDGRPTVYFDYDEDEVMAARRGKFLSLTNQEGLLFMRQRGYDHVQTMLAEGKLDCIKEAALPLQMNTTGGLTGKD 322
BLAST of mRNA_Ecto-sp13_S_contig13883.3034.1 vs. uniprot
Match: A0A7S0MNQ6_9CRYP (Hypothetical protein (Fragment) n=2 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0MNQ6_9CRYP) HSP 1 Score: 190 bits (482), Expect = 1.350e-52 Identity = 102/233 (43.78%), Postives = 126/233 (54.08%), Query Frame = 1
Query: 283 PSGKPVLSFPGGGIFFWWQAGVISALQERYNLSSLDFVGASAGSLAAXXXXXXXXXXXXXXXALDLCDTNEIWTRPLGLAGVWGAMVEDWLDELLPDDADVICRDRVHLLVIGIWPR--PFRRRAVSDFTSKSDLIKACMASVHIPWFMDKHFSARHRGGRFVDGSF----RASREDLSLGDARPTVYFDYDEDEVMAARRGKFLSLTNQEGLLFMRQRGYDHVQTMLAEGKL 963
P P++ FPGGGI+FWWQAG + ALQE Y L LD GASAG+L A A L D N +W RP GL G+WG M+ WL ELLPDDA C RV + V + P P RR +V DF +K D+I AC+ASVHIP+F+D +ARHRG R VDGS R + GD + + D +A R FL + EG + +RGYDH A L
Sbjct: 61 PERPPLIVFPGGGIYFWWQAGAVKALQEMYTLDDLDMTGASAGALCAVLAGCNVDMDRAFELASRLADENGVWERPQGLMGIWGGMIRQWLHELLPDDAARRCSGRVAISVTALSPAVPPLRRLSVDDFETKGDVIDACLASVHIPFFLDGKATARHRGARCVDGSLTFALRRTPWLFKPGDRQAALVVHQSHDAGLAGDRPGFLETLSLEGFRELYRRGYDHTHAAHAAAAL 293
BLAST of mRNA_Ecto-sp13_S_contig13883.3034.1 vs. uniprot
Match: A0A388K383_CHABU (Patatin n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388K383_CHABU) HSP 1 Score: 188 bits (477), Expect = 7.460e-49 Identity = 107/240 (44.58%), Postives = 139/240 (57.92%), Query Frame = 1
Query: 292 KPVLSFPGGGIFFWWQAGVISALQERYNLSSLDFVGASAGSLAAXXXXXXXXXXXXXXXALDLCDTNEIWTRPLGLAGVWGAMVEDWLDELLPDDADVICRDRVHLLVIGI-----WPRPFRRRAVSDFTSKSDLIKACMASVHIPWFMDKHFSARHRGGRFVDGSFRASREDLSLGDARPTVYFDYDEDEVMAARRGKFLSLTNQ-EG-------LLFMRQRGYDHVQTMLAEGKLDSI 972
+P+LSF GGGIFF+WQ G AL ++L D GASAG+LAA A L N +W RP GL G+WG M+ WLDELLP +A +C R+H+ V+ + F RR V F SK DLI ACMASVHIP+F+D AR R VDGSF AS+ +S RPTV+ DY +DE +A++R +FLSL Q EG LL M +G HV+ +L++ KL ++
Sbjct: 380 RPLLSFQGGGIFFYWQLGAARALSRHFDLDKADMAGASAGALAATLAACEVDAEEATKLAFQLSLDNRVWDRPTGLGGIWGPMIRSWLDELLPPNAAQLCDGRLHIYVLELPSLRRRSPAFVRRGVCQFHSKRDLIDACMASVHIPFFIDGGACARFRDRWCVDGSFLASKHSISPYPDRPTVWVDYMDDEDLASQRLRFLSLGAQGEGPQRTWQWLLTMISKGEAHVEKLLSDHKLAAL 619
BLAST of mRNA_Ecto-sp13_S_contig13883.3034.1 vs. uniprot
Match: L1IQE7_GUITC (PNPLA domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IQE7_GUITC) HSP 1 Score: 177 bits (450), Expect = 1.660e-48 Identity = 91/240 (37.92%), Postives = 134/240 (55.83%), Query Frame = 1
Query: 280 PPSGKPVLSFPGGGIFFWWQAGVISALQERYNLSSLDFVGASAGSLAAXXXXXXXXXXXXXXXALDLCDTNEIWTRPLGLAGVWGAMVEDWLDELLPDDADVICRDRVHLLVIGIWP-----RPFRRRAVSDFTSKSDLIKACMASVHIPWFMDKHFSARHRGGRFVDGSF----RASREDLSLGDARPTVYFDYDEDEVMAARRGKFLSLTNQEGLLFMRQRGYDHVQTMLAEGKLDSI 972
P +P++ FPGGGI+FWWQAGV+ LQ+R N+ S DF GASAGSL+A A L + +WTR GLAG+WG M+ WLDELLP++A IC DRV ++ + + P +R++++ F +K DLI+ACMASVH+P F+D S G VDGS R D +P++ + +D+ + AR+ FL + + M + G + + M+ + L+S
Sbjct: 12 PSDSRPLIVFPGGGIYFWWQAGVVQGLQKRINVDSFDFTGASAGSLSAVFAACGVDMMQAFHLAQKLAEEKNVWTRKEGLAGIWGDMIYQWLDELLPENAAEICTDRVDMVAVSVTSVRLSFLPLKRKSITRFKTKKDLIEACMASVHVPMFLDGKMSRSLDGDICVDGSITFVLRNKPWHFKPQDRKPSLMIHHQDDKELMARKWNFLETISLDQFEEMFEMGQKYAEEMIDKKTLESF 251
BLAST of mRNA_Ecto-sp13_S_contig13883.3034.1 vs. uniprot
Match: A0A7S0MR98_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0MR98_9CRYP) HSP 1 Score: 176 bits (447), Expect = 1.160e-47 Identity = 92/230 (40.00%), Postives = 127/230 (55.22%), Query Frame = 1
Query: 265 SPAILPPSGKPVLSFPGGGIFFWWQAGVISALQERYNLSSLDFVGASAGSLAAXXXXXXXXXXXXXXXALDLCDTNEIWTRPLGLAGVWGAMVEDWLDELLPDDADVICRDRVHLLVIGIWPR--PFRRRAVSDFTSKSDLIKACMASVHIPWFMDKHFSARHRGGRFVDGSF----RASREDLSLGDARPTVYFDYDEDEVMAARRGKFLSLTNQEGLLFMRQRGYDHV 936
SP+ P++ FPGGGI+FWWQAG + ALQERY++ GASAG+L A A L N +W R GL G+WG+++ +WLD +LP++A +CR RV + V + P +RR+V DF +K DL++AC+ASVHIP+F+D + HRG VDGS R + P + D+ DE + ARR FL +Q+ M Q GY HV
Sbjct: 33 SPSSQITDQPPLIVFPGGGIYFWWQAGAVKALQERYDIDKCSLTGASAGALIAVLAGCKIDMDYALQVAERLAVQNGVWGRACGLMGIWGSIIYEWLDIILPENAAELCRGRVSVSVTSVHSSFPPLKRRSVGDFGTKRDLMQACLASVHIPFFLDGRLFSGHRGAACVDGSLTFVLRGKPWHFRPDEPEPALLVDHRTDEALMARRWGFLQTISQDAFRHMYQLGYAHV 262
BLAST of mRNA_Ecto-sp13_S_contig13883.3034.1 vs. uniprot
Match: A0A7S4C0Y1_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4C0Y1_CHRCT) HSP 1 Score: 174 bits (441), Expect = 6.510e-47 Identity = 108/254 (42.52%), Postives = 146/254 (57.48%), Query Frame = 1
Query: 274 ILPPSGK----PVLSFPGGGIFFWWQAGVISALQERYNLSSLDFVGASAGSLAAXXXXXXXXXXXXXXXALDLCDTNEIWTRPL-GLAGVWGAMVEDWLDELLPDDADVICRDRVHLLVIGIWPRP----FRRRAVSDFTSKSDLIKACMASVHIPWFMDKHFSARHRGGRFVDGSFR----ASREDLSLGDARPTVYFDYDEDEVMA---ARRGKFLSLTNQEGLLFMRQRGYDHVQTMLAEGKLDSIKEAAL 987
++PP+ P L+FPGGGIFFWWQAG ++AL ER++L+ + VGASAG+LAA A DL D + ++ R GL GVWG MV +WLDELLP DADV+CR RVH+LV + PR F +SD+ S++DLI +AS H+P F+D ++AR RG R VDGS +S + L P V D D M +RR FL L +++G+ M + G HV M +G L+ + AL
Sbjct: 27 MVPPASTLQQLPGLAFPGGGIFFWWQAGAVAALNERFDLARVPCVGASAGALAATIAATKVDPHRALDIAADLADRHGVYDRGAWGLYGVWGPMVREWLDELLPKDADVMCRGRVHILVKRV-PRLRHPYFEPVMLSDYRSRADLIDVNLASAHVPLFLDGRWTARLRGMRCVDGSLSLRPDSSLRRVVLPGRAPVVRIDSSGDLRMRERYSRREDFLRLASRDGVEEMLEWGVKHVAQMERDGALELLAPYAL 279
BLAST of mRNA_Ecto-sp13_S_contig13883.3034.1 vs. uniprot
Match: K0TQT9_THAOC (PNPLA domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TQT9_THAOC) HSP 1 Score: 171 bits (434), Expect = 4.940e-46 Identity = 93/231 (40.26%), Postives = 138/231 (59.74%), Query Frame = 1
Query: 295 PVLSFPGGGIFFWWQAGVISALQER-YNLSSLDFVGASAGSLAAXXXXXXXXXXXXXXXALDLCDTNEIWTRPLGLAGVWGAMVEDWLDELLPDDADVICRDR-VHLLVIGIWPRPFRRRAVSDFTSKSDLIKACMASVHIPWFMDKHFSARHRGGRFVDGSFRASRED-LSLGDA-RPTVYFDYDEDEVMAARRGKFLSLTNQEGLLFMRQRGYDHVQTMLAEGKLDSIK 975
P + FPGGG+FF+WQAGV++ LQE Y+LS+ GASAG+L+A AL + N +W RP+GL G+WG+++EDWLD LLPDDA + D +H+LV + F + VS+F +SDLI+A MASVH+PWF+D + + RG +DGSF AS D LS D R + D+ D VM + G+F+ + + + + + RG ++ + M G+ ++
Sbjct: 39 PAIVFPGGGLFFYWQAGVVTHLQEAGYDLSAATMSGASAGALSATLAKTGVSPIDATELALHMSKENGVWERPMGLQGIWGSIIEDWLDRLLPDDAALRVDDGCLHILVTPV--PSFGKSRVSNFEDRSDLIRANMASVHLPWFLDSNLTTHFRGRACIDGSFLASPSDYLSDRDQDRQRLVLDFKRDPVMKDKAGEFIKVVSPQAIWDILDRGKEYARIMERSGEFACLE 267
BLAST of mRNA_Ecto-sp13_S_contig13883.3034.1 vs. uniprot
Match: A0A6U3R5T6_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3R5T6_9STRA) HSP 1 Score: 171 bits (433), Expect = 2.410e-45 Identity = 95/231 (41.13%), Postives = 133/231 (57.58%), Query Frame = 1
Query: 307 FPGGGIFFWWQAGVISALQER-YNLSSLDFVGASAGSLAAXXXXXXXXXXXXXXXALDLCDTNEIWTRPLGLAGVWGAMVEDWLDELLPDDADVICRDRVHLLVIGIWPRPFRRRAVSDFTSKSDLIKACMASVHIPWFMDKHFSARHRGGRFVDGSFRASRED----LSLGDARPT-VYFDYDEDEVMAARRGKFLSLTNQEGLLFMRQRGYDHVQTMLAEGKLDSIKEA 981
FPGGGIFF+WQAG S L+E Y+LS + GASAG+LAA AL L + +W RPLGL GVWG M+E WL++LLPD+A + +R+ LLV I FR +S F SK DL++ MASVH+PWF+D ++ R +DGSFRA ED + G + + D+ D VM + F+ LT++EG+ + ++G + Q M G D+I ++
Sbjct: 86 FPGGGIFFYWQAGAASYLREAGYDLSDVTMSGASAGALAATLTLADVDFEEATSLALKLAEDAGVWDRPLGLQGVWGPMIETWLNDLLPDNAVEMVDERLSLLVTSI--PSFRTDRISSFESKEDLVRCNMASVHLPWFLDGKLTSNFRQAPRIDGSFRAKTEDYFPQVKNGQVDDSLIILDWKSDPVMEGKTKDFIKLTSKEGIWDLLEQGRSYAQIMDKRGDFDTISQS 314
BLAST of mRNA_Ecto-sp13_S_contig13883.3034.1 vs. uniprot
Match: A0A7S2IAY4_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2IAY4_9STRA) HSP 1 Score: 171 bits (433), Expect = 3.220e-45 Identity = 98/232 (42.24%), Postives = 130/232 (56.03%), Query Frame = 1
Query: 307 FPGGGIFFWWQAGVISALQER-YNLSSLDFVGASAGSLAAXXXXXXXXXXXXXXXALDLCDTNEIWTRPLGLAGVWGAMVEDWLDELLPDDADVICRDRVHLLVIGIWPRPFRRRAVSDFTSKSDLIKACMASVHIPWFMDKHFSARHRGGRFVDGSFRASRED---------LSLGDARPTVYFDYDEDEVMAARRGKFLSLTNQEGLLFMRQRGYDHVQTMLAEGKLDSI 972
FPGGGIFF+WQAG S L+E Y+LSS+ GASAG+L A AL L + +W RPLGL GVWG M+E WL++LLP++A + DR+ LLV I FR +S F SK DL+K MASVH+PWF+D ++ R VDGSFRA D LS D + D+ D +M + F++LT++EG+ + +RG H + M G D I
Sbjct: 94 FPGGGIFFYWQAGAASYLREAGYDLSSVRMSGASAGALVATLTLTDVDFDEATRLALSLAEEAGVWERPLGLQGVWGPMIETWLNDLLPENAVEMVDDRLSLLVTAI--PSFRTDRISSFNSKEDLVKCNMASVHLPWFLDGKLTSNFRDAPHVDGSFRAKPNDYFPELNGQELSEDDDS-LIILDWKADPIMKGKAKDFVTLTSKEGIWGLVERGRSHAKIMDKRGAFDGI 322
BLAST of mRNA_Ecto-sp13_S_contig13883.3034.1 vs. uniprot
Match: A0A7S4JAL6_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JAL6_9STRA) HSP 1 Score: 167 bits (423), Expect = 8.820e-44 Identity = 101/266 (37.97%), Postives = 146/266 (54.89%), Query Frame = 1
Query: 202 PAALRRRLTLSAGFNDDGIVASPAILPPSGK----PVLSFPGGGIFFWWQAGVISALQER-YNLSSLDFVGASAGSLAAXXXXXXXXXXXXXXXALDLCDTNEIWTRPLGLAGVWGAMVEDWLDELLPDDADVICRDRVHLLVIGIWPRP-FRRRAVSDFTSKSDLIKACMASVHIPWFMDKHFSARHRGGRFVDGSFRASREDLSLGDARP--TVYFDYDEDEVMAARR-GKFLSLTNQEGLLFMRQRGYDHVQTMLAEGKLDSI 972
P+A RRL ++ AS + GK P L FPGGGIFF+WQAG ++ L+E Y+LSS+ GASAG+L A AL +W RPLGL GVWG+++E WLD+LLP DA D L ++ + P P F + V+DF +SDLI+A MAS+HIPWF+D + R+R +DGSF + D + + RP V D+ +D M+ ++ G F+ ++EG+ + +RG + M G +S+
Sbjct: 64 PSAEERRLQMATSS------ASESSSTSEGKRERAPQLIFPGGGIFFYWQAGAVTHLRESGYDLSSVSMSGASAGALTATLAATGVDFLDATDLALQFAQEAGVWDRPLGLQGVWGSLIERWLDDLLPPDAHATANDGPGLQLL-VTPVPSFGKTKVTDFRDRSDLIRANMASIHIPWFLDGKLTTRYRDAEHIDGSFLSKATDY-VTEVRPKNVVRLDWTKDPAMSDKKLGDFVEALSKEGIWDLVERGKSYAALMEERGDFESL 321 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13883.3034.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig13883.3034.1 >prot_Ecto-sp13_S_contig13883.3034.1 ID=prot_Ecto-sp13_S_contig13883.3034.1|Name=mRNA_Ecto-sp13_S_contig13883.3034.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=323bp MRGFRAMVALNNVLHVGAFLLPISSVLRGNTAPQSTFLPSPAGTPDPAALback to top mRNA from alignment at Ecto-sp13_S_contig13883:259..4275+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig13883.3034.1 ID=mRNA_Ecto-sp13_S_contig13883.3034.1|Name=mRNA_Ecto-sp13_S_contig13883.3034.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4017bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13883:259..4275+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig13883:259..4275+ >mRNA_Ecto-sp13_S_contig13883.3034.1 ID=mRNA_Ecto-sp13_S_contig13883.3034.1|Name=mRNA_Ecto-sp13_S_contig13883.3034.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=969bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13883:259..4275+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |