mRNA_Ecto-sp13_S_contig1373.2931.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig1373.2931.1
Unique NamemRNA_Ecto-sp13_S_contig1373.2931.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig1373.2931.1 vs. uniprot
Match: A0A6H5K9Q8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9Q8_9PHAE)

HSP 1 Score: 698 bits (1801), Expect = 1.260e-249
Identity = 374/421 (88.84%), Postives = 389/421 (92.40%), Query Frame = 1
Query:   37 MMQRVVLLLFQIVPSASLLVSWTAARSRLSQKVQRSCTSVDSHTPGGGLSGGEPRDAMISELLQLFQGEFDNYDQVVADRKAGMTPGPGGGHEHIHCSLKRLDPAEVPGQVAAXXXXXXXXXXXXXXXXXXXXXXXXE-------RPLAVVAAKYYFNGDSNVVFRYRLYSFHACPPNTPGARGEAVMRLWRLLPHVEARLRTNSYDLTSFSWSDDDTNQREPGRGSDDVSSERCSKEGRTGDDVVERIFGCEIYWGRHQAGGEDEKTMPGGISGPGKRDTNGGAVPERGAGGXXXXXXXXXXVGGKSFVGLMGEDDGGTWVESQNVDGLEILVKDDLRLWPDRLWVNDRGFDRQGNFVYGNQRDVPYKMRRVTAGGPLEWTLGARHRTEKTYADKMSAIGVTPGQRVGPPVRVAAPAGTG 1278
            MMQRVVLLL Q+VPSA LLVSWTA+RSRLSQKVQRSCTSVDSHTPGGGLSG EPRDAM+SELLQLFQGEFDNYDQVVADRKAGMTPGPGGGHEHIHCSLK+LDPAEVPGQVAAXXXXXXXXXXXXXXXXXXXXXXXX        RPLAVVAAKYYFNGDSNVVFRYRLYSFHACPPNTPGARGEAVMRLWRLLPHVEARLR NSYDLTSFSWSDDD+NQREP RGSD+ S++RCSKEGRTG+DVVER+FGCEIYWGRHQAGGEDEK+MPGGISGPGK+D NGGAVPERGAG            GGKSFVGLMG+DD GTWVESQNVDGLEILVKDDLRLWPD LWVNDRGFDR GNFVYGNQRDVPYKMRRVTAGGPLEWTLGARHRTEKTYA+KMSAIGVT GQR+ PPVRVAAPAGTG
Sbjct:    1 MMQRVVLLLLQVVPSAGLLVSWTASRSRLSQKVQRSCTSVDSHTPGGGLSGDEPRDAMVSELLQLFQGEFDNYDQVVADRKAGMTPGPGGGHEHIHCSLKQLDPAEVPGQVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPLAVVAAKYYFNGDSNVVFRYRLYSFHACPPNTPGARGEAVMRLWRLLPHVEARLRANSYDLTSFSWSDDDSNQREPSRGSDNASNDRCSKEGRTGNDVVERMFGCEIYWGRHQAGGEDEKSMPGGISGPGKQDANGGAVPERGAG------EDAAGGGGKSFVGLMGKDDSGTWVESQNVDGLEILVKDDLRLWPDSLWVNDRGFDRDGNFVYGNQRDVPYKMRRVTAGGPLEWTLGARHRTEKTYAEKMSAIGVTLGQRLRPPVRVAAPAGTG 415          
BLAST of mRNA_Ecto-sp13_S_contig1373.2931.1 vs. uniprot
Match: D7G1T3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1T3_ECTSI)

HSP 1 Score: 274 bits (700), Expect = 5.640e-87
Identity = 134/153 (87.58%), Postives = 140/153 (91.50%), Query Frame = 1
Query:  820 MPGGISGPGKRDTNGGAVPERGAGGXXXXXXXXXXVGGKSFVGLMGEDDGGTWVESQNVDGLEILVKDDLRLWPDRLWVNDRGFDRQGNFVYGNQRDVPYKMRRVTAGGPLEWTLGARHRTEKTYADKMSAIGVTPGQRVGPPVRVAAPAGTG 1278
            MPGGISGPGK+DT+GGAVPERGAG            GGKSFVGLMGEDD GTWVESQNVDGLEILVKDDLRLWPDRLWVNDRGFDRQGNFVYGNQRDVPYKMRRVTAGGPLEWTLGARHRTEKTYA++MSAIGVTPGQR+GPPVR+AAPAGTG
Sbjct:    1 MPGGISGPGKQDTDGGAVPERGAG------EDAAGGGGKSFVGLMGEDDSGTWVESQNVDGLEILVKDDLRLWPDRLWVNDRGFDRQGNFVYGNQRDVPYKMRRVTAGGPLEWTLGARHRTEKTYAERMSAIGVTPGQRLGPPVRIAAPAGTG 147          
BLAST of mRNA_Ecto-sp13_S_contig1373.2931.1 vs. uniprot
Match: D7G1T2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1T2_ECTSI)

HSP 1 Score: 247 bits (631), Expect = 2.910e-76
Identity = 154/177 (87.01%), Postives = 156/177 (88.14%), Query Frame = 1
Query:   37 MMQRVVLLLFQIVPSASLLVSWTAARSRLSQKVQRSCTSVDSHTPGGGLSGGEPRDAMISELLQLFQGEFDNYDQVVADRKAGMTPGPGGGHEHIHCSLKRLDPAEVPGQVAAXXXXXXXXXXXXXXXXXXXXXXXXERPLAVVA--------AKYYFNGDSNVVFRYRLYSFHACP 543
            MMQRVVLLL Q+VPSA LLVSWTAARSRLSQKVQRSCTSVDSHTPGGGLSG EPRDAM+SELLQLFQGEFDNYDQVVADRKAGMTPGPGGGHEHIHCSLKRLDPAEVP QVA XXXXXXXXXXXXXXXXXXXXXXXX                AKYYFNGDSNVVFRYRLYSFHACP
Sbjct:    1 MMQRVVLLLLQVVPSAGLLVSWTAARSRLSQKVQRSCTSVDSHTPGGGLSGDEPRDAMVSELLQLFQGEFDNYDQVVADRKAGMTPGPGGGHEHIHCSLKRLDPAEVPEQVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKYYFNGDSNVVFRYRLYSFHACP 177          
BLAST of mRNA_Ecto-sp13_S_contig1373.2931.1 vs. uniprot
Match: A0A5J4Z4Z5_PORPP (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z4Z5_PORPP)

HSP 1 Score: 153 bits (386), Expect = 4.420e-37
Identity = 106/325 (32.62%), Postives = 135/325 (41.54%), Query Frame = 1
Query:  199 RDAMISELLQLF----QGEFDNYDQVVADRKAGMTPGPGGGHEHIHCSLKRLDPAEVPGQVAAXXXXXXXXXXXXXXXXXXXXXXXXERPLAVVAAKYYFNGDSNVVFRYRLYSFHACPPNTPGARGEAVMRLWRLLPHVEARLRTNSYDLTSFSWSDDDTNQREPGRGSDDVSSERCSKEGRTGDDVVERIFGCEIYWGRHQAGGEDEKTMPGGISGPGKRDTNGGAVPERGAGGXXXXXXXXXXVGGKSFVGLMGEDDGGTWVESQNVDGLEILVKDDLRLWPDRLWVNDRGFDRQGNFVYGNQRDVPYKMRRVTAGGPLEWT 1161
            R AM    L LF    +G+FDNYDQV+ +++ G T G GGGHEHIHC L R+                                       +++ AKYYFNGD N V+R R+Y       +    +G   MR++R     EARLR   Y +    W                           TGDD+ E + GCE++W R +      KT                                   +G   F G M    GG  V S  +    ILVKDDL L  + LWVNDRGFD  G+FVYGN+R VPYKM+R +    LEWT
Sbjct:  253 RRAMAQRNLDLFMTSFEGDFDNYDQVLENKRLGFTEGEGGGHEHIHCKLSRIGENS-----------------------------------SMIFAKYYFNGDPNSVYRARVYEIFL---DDSDDKGVIEMRIYRFYAETEARLRACGYRINEIDW---------------------------TGDDLYEWLQGCEVFWERRKF-----KTAQ--------------------------ALEQSEIIGPFFFRGFMAG--GGCTVFSPTMKS-RILVKDDLILTGNELWVNDRGFDENGHFVYGNRRGVPYKMKRTSCNPHLEWT 478          
BLAST of mRNA_Ecto-sp13_S_contig1373.2931.1 vs. uniprot
Match: K0TER5_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TER5_THAOC)

HSP 1 Score: 136 bits (342), Expect = 9.950e-32
Identity = 111/366 (30.33%), Postives = 149/366 (40.71%), Query Frame = 1
Query:  220 LLQLFQGEFDNYDQVVADRKAGMTPGPGGGHEHIHCSLKRLDPAEVPGQVAAXXXXXXXXXXXXXXXXXXXXXXXXERPLAVVAAKYYFNGDSNVVFRYRLYSFHACPPNTPGARGEAV--MRLWRLLPHVEARLRTNSYDLTSF------SWSDDDTNQREPGRGSDDVSSERCSKEGRTGDDVVERIFGCEIYWGRHQAGGEDEKTMPGGISGPGKRDTNGGAVPERGAGGXXXXXXXXXXVGGKSFVGLMGEDDGGTWVESQN-VDGLEILVKDDLRLWPDRLWVNDRGFDRQGN-----------FVYGNQRDVPYKMRRV-----TAG---------GPLEWTLGARHRTEKTYADKMSAI 1215
            L   FQG+FDNY+QVV DR+ G+TPG GGGHEHIHC+L       VP                              R    + A +YFNG+   +FR+R Y   A P +     G AV  M+L  L P +E  LR  S +  S+       WS +D  +            E      +    +V  + GC++ W       +    +    +     D                           SF   M     G  V+S + + G  IL+KD+L LW D+ W+NDRG+D  G            FVYGN+R VPYK+ RV     TAG         G L+WTLG  +RT   Y  K+ AI
Sbjct:   80 LTSTFQGDFDNYNQVVLDRQHGLTPGAGGGHEHIHCTL-------VP------------------CPDFGDDAEGDTRRSRWILAAFYFNGNPQQIFRFRAYQLWA-PDHDGMDDGSAVVRMKLNTLSPILEQALRKRSEEPCSWWRTAWKVWSGEDKKK----------FHEDIIPWSQFIPSLVSPLQGCDVLWEEDWDAAKHSYLLDNAYNSDESNDIT--------------------SFCDTSFHATMEAGSSGAIVDSISMIPGQRILIKDELSLWEDKFWINDRGYDPDGETDSMNENQDMPFVYGNRRGVPYKLERVSHIVSTAGAELQVAPVSGELQWTLGGSYRTPGEYEAKLKAI 389          
BLAST of mRNA_Ecto-sp13_S_contig1373.2931.1 vs. uniprot
Match: B7G7Q1_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G7Q1_PHATC)

HSP 1 Score: 128 bits (321), Expect = 1.800e-29
Identity = 108/344 (31.40%), Postives = 139/344 (40.41%), Query Frame = 1
Query:  220 LLQLFQGEFDNYDQVVADRKAGMTPGPGGGHEHIHCSLKRLDPAEVPGQVAAXXXXXXXXXXXXXXXXXXXXXXXXERPLAVVAAKYYFNGDSNVVFRYRLYSFHACPPNTPGARGEAVMRLWRLLPHVEARLRTNSYDLTSFSWSDDDTNQREPGRGSDDVSSERCSKEGRTGDDVVERIFGCEIYWGRHQAGGEDEKTMPGGISGPGKRDTNGGAVPERGAGGXXXXXXXXXXVGGKSFVGLMGEDDGGTWVESQNVDGLEILVKDDLRLWPDRLWVNDRGFDRQG-NFVYGNQRDVPYKMRRVT----------AGGPLEWTLGARHRTEKTYADKMSAIG 1218
            LL  FQG+FDNY+QV+ DRK G+ P  GGGHEHIHCSL    P     ++AA                                  +YF+G    +FR+R Y         P         L  L P +E RLR                  R P   S  +  E    +GR     V+ +  C++ W                +  P + D    A+ E                 G   V + GE      VESQ + G +IL+KD L LWPD LW++DRGFD     F+YGNQR VPY++ RVT              L WTLG   R+E  Y DKM A+G
Sbjct:   66 LLDRFQGDFDNYNQVIHDRKKGLLPREGGGHEHIHCSLV---PVSETARLAA----------------------------------FYFDGVPGAIFRFRFYDL------IPVDESTIDTVLHTLHPELERRLR------------------RCPDPSSWPLFFEEFGVKGR-----VQLLPKCDVRWSW--------------VLDPVQHDY---ALDE--------------GPNGLHAVMVHGE----ALVESQMMPGQKILIKDQLSLWPDELWIHDRGFDPDTMRFIYGNQRGVPYRLERVTDIALNNGRTIVQEDLAWTLGPDFRSEGEYQDKMVAVG 308          
BLAST of mRNA_Ecto-sp13_S_contig1373.2931.1 vs. uniprot
Match: A0A1E7FNR9_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FNR9_9STRA)

HSP 1 Score: 108 bits (269), Expect = 9.320e-22
Identity = 110/414 (26.57%), Postives = 156/414 (37.68%), Query Frame = 1
Query:  103 TAARSRLSQKVQRSCTSVDSHTPGGGLSGGEPRDAMISELL-QLFQGEFDNYDQVVADRKAGMTPGPGGGHEHIHCSLKRLDPAEVPGQVAAXXXXXXXXXXXXXXXXXXXXXXXXERPLAVVAAKYYFNGDSNVVFRYRLYSF----------HACPPNTPGARGEAVMRLWRLLPHVEARLRTNSYDLTSFSWSDDDTNQREPGRGSDDVSSERCSKEGRTGDDVVERIFGCEIYWGRHQAGGEDEKTMPGGISGPGKRDTNGGAVPERGAGGXXXXXXXXXXVGGKSFVGLMGEDDGGTWVESQNVDGLEILVKDDLRLWPDRLWVNDRGFDR-QGNFVYGNQRDVPYKMRRVTAGGP------------------------------LEWTLGARHRTEKTYADKMSAIG 1218
            +A      + V   C S  S   G G   GE     ++++L + FQG+FDNY QVV DRK G+ P  GGGHEH HC+L    P     ++AA                                  ++F+G+ N +FR+R Y            H    N         MRL  L P +E  L+++S D    SW D   N +  G  S+              +  V  +  CEI W       + +      IS    +D                           S   +M    G   V S  V G++I + D L L+    ++NDRGFD   G F+YGNQRD+PY++ RV+   P                              LEWT+G ++RT + Y  K+  IG
Sbjct:   57 SAVTGTFQEMVVEPCESTSS-VDGVGDGDGESSHEKVTKILSEWFQGDFDNYAQVVEDRKNGLLPREGGGHEHFHCTLV---PVTESTRLAA----------------------------------FFFDGNPNRIFRFRYYELLTPTIINDVDHQHSNNVT-----VEMRLNTLHPELEQLLKSHSTD--PLSWPDIFKNFQHEGVSSNSSXXXXXXXXSDEKNQKVIPLSKCEIVWSF-----DKDPIQHSYISSDDGKDDE---------------------AENMSLHAVMVH--GEQVVNSTIVPGMQIRILDQLSLYQHVFYINDRGFDPITGAFIYGNQRDIPYRLERVSNILPSATSAADXXXXXXSTADRRERLQLEVINPELEWTIGPKYRTIEEYDSKLKVIG 397          
BLAST of mRNA_Ecto-sp13_S_contig1373.2931.1 vs. uniprot
Match: A0A7S2PZJ6_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PZJ6_9STRA)

HSP 1 Score: 106 bits (264), Expect = 4.190e-21
Identity = 110/406 (27.09%), Postives = 155/406 (38.18%), Query Frame = 1
Query:  202 DAMISELLQLFQGEFDNYDQVVADRKAGMTPGPGGGHEHIHCSLKRLDPAEVPGQVAAXXXXXXXXXXXXXXXXXXXXXXXXERPLAVVAAKYYFNGDSNVVFRYRLYSFHACPP---NTPGARGEAV-MRLWRLLPHVEARLRTNSYDLTSFSWSD------DDTNQREPGRGSDDVSSERCSKEGRTGDDVVERIFGCEIYWG------RH-----QAGGEDEKTMPGGISGPGKRDTNGGAVPERGAGGXXXXXXXXXXVGGKSFVGLMGEDDGGTWVESQN-VDGLEILVKDDLRLWPDRLWVNDRGFDRQ------------------GN--FVYGNQRDVPYKMRRVT--------------AGGP------------LEWTLGARHRTEKTYADKMSAI 1215
            D     LL  FQG+FDNY QV+ DR   + P  GGGHEHIHC+L       VP    A                              + A +YFNG+   +FR+R+Y   +      N+    GE V M+L  L   +E +LR  S D     W +      +  N+ E     D+ S+E  +        +V  + GC++ W       +H        G D  + P  I+    ++ N                     V G      M     G  V+S + + G  IL+KD+L LW D  W+NDRG+D                    GN  FVYGN+R VPYK+ RV+              +  P            L WTLG   R +  Y +K+ A+
Sbjct:   57 DNYFHHLLSQFQGDFDNYHQVIRDRNHALAPADGGGHEHIHCTL-------VPCPHTAVTQEQRQNNDQW------------------ILAAFYFNGNPRQIFRFRMYKLISPQDDDSNSNNIDGEKVRMKLHTLSSELEQQLRQYS-DQPCTWWRETYDVWLNSINEGE-NESDDNRSNEWNTFRSEGIQHLVSPLVGCDVLWDPQWDPKKHAYLNVDEYGNDTSSSPTTIN----KNNN---------------------VDGCHAT--MEAGSAGAIVDSISLIPGKRILIKDELSLWEDEFWINDRGYDPDAVVDDNDGGGNDENEDGVGNMPFVYGNRRGVPYKLERVSCISTENTNEGSDDMSSAPPLLLERTIHKQELAWTLGDDFREQTEYEEKLRAV 408          
BLAST of mRNA_Ecto-sp13_S_contig1373.2931.1 vs. uniprot
Match: A0A7S1XI40_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1XI40_9RHOD)

HSP 1 Score: 99.4 bits (246), Expect = 2.430e-19
Identity = 61/193 (31.61%), Postives = 79/193 (40.93%), Query Frame = 1
Query:  211 ISELLQLFQGEFDNYDQVVADRKAGMTPGPGGGHEHIHCSLKRLDPAEVPGQVAAXXXXXXXXXXXXXXXXXXXXXXXXERPLAVVAAKYYFNGDSNVVFRYRLYSFHACPPNTPGARGEAVMRLWRLLPHVEARLRTNSYDLTSFSWSDDDTNQREPGRGSDDVSSERCSKEGRTGDDVVERIFGCEIYWGR 789
            ++  L  F+GEFDNYDQV+A+   G++P  GGGHEHIHCSL  +   E                                     + AKYYF GD   VFR RLY       N    RG   MR++R     E+RLR  +YD+    W                           T DD+ E + GCE++W R
Sbjct:  160 LALFLSEFKGEFDNYDQVLANNALGLSPREGGGHEHIHCSLSHITKGES----------------------------------TFIFAKYYFGGDPGAVFRARLYRVLL---NETCERGVLEMRIYRFFEETESRLRACNYDIEHTDW---------------------------TEDDLYEWLEGCEVFWER 288          
BLAST of mRNA_Ecto-sp13_S_contig1373.2931.1 vs. uniprot
Match: A0A7S4N064_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4N064_9STRA)

HSP 1 Score: 99.4 bits (246), Expect = 5.340e-19
Identity = 105/391 (26.85%), Postives = 146/391 (37.34%), Query Frame = 1
Query:  220 LLQLFQGEFDNYDQVVADRKAGMTPGPGGGHEHIHCSLKRLDPAEVP---GQVAAXXXXXXXXXXXXXXXXXXXXXXXXERPLAVVAAKYYFNGDSNVVFRYRLYSFHAC-------PPNTPGARGEAV-MRLWRLLPHVEARLRTNSYDLTSFSWSDDDTNQREPGRGSDDVSSERCSKEGRTGDDVV-------ERIFGCEIYWG------RHQAGGEDEKTMPGGISGPGKRDTNGGAVPERGAGGXXXXXXXXXXVGGKSFVGLMGEDDGGTWVESQNVDGLEILVKDDLRLWPDRLWVNDRGF-------DRQGN-----FVYGNQRDVPYKMRRVTA-------GGP---------------LEWTLGARHRTEKTYADKMSAIG 1218
            L+   QG+FDNY QV  DR  GM P  GGGHE +HC++  ++   +    G +AA                        E   AV++A +YF+G    +FR+R+Y+ + C               GE+  MRL+ L P VE  LR              D  +R  G     +  E  ++EG                + GC++ W       RH     +                     PER                  +   +M  D  G  V S    G  + V+D+L LW D LW+NDRGF       D  GN     +VYGN+R VPY M R          GG                L WT+G+  R E  Y ++M A+G
Sbjct:   34 LVSRLQGDFDNYRQVERDRSEGMLPREGGGHEWMHCTVVPVEGRALEALNGAIAAPRGGEGEG----------------EADAAVLSA-FYFDGVPERIFRFRMYALNYCRGGDXXXXXXXXXXXGESARMRLYTLGPSVEGPLRAAP-----------DAPERWGGALMASLLREDGNEEGXXXXXXXXPRPPPFRLLEGCDVLWTPTPHRTRHAYAARNR--------------------PER------------------ALHAVMTND--GAVVPSVMKPGTYLRVRDELSLWEDELWINDRGFAPECDRTDDPGNIGEDDWVYGNRRGVPYAMERAARFSTVDGDGGDDDDDAVFAREVVDAALAWTMGSSWRDEDEYCERMEAVG 356          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1373.2931.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K9Q8_9PHAE1.260e-24988.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G1T3_ECTSI5.640e-8787.58Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G1T2_ECTSI2.910e-7687.01Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A5J4Z4Z5_PORPP4.420e-3732.62Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
K0TER5_THAOC9.950e-3230.33Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
B7G7Q1_PHATC1.800e-2931.40Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A1E7FNR9_9STRA9.320e-2226.57Uncharacterized protein n=1 Tax=Fragilariopsis cyl... [more]
A0A7S2PZJ6_9STRA4.190e-2127.09Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A7S1XI40_9RHOD2.430e-1931.61Hypothetical protein (Fragment) n=1 Tax=Erythrolob... [more]
A0A7S4N064_9STRA5.340e-1926.85Hypothetical protein n=2 Tax=Odontella aurita TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1373contigEcto-sp13_S_contig1373:4672..8065 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score273.5
Seed ortholog evalue1.7e-70
Seed eggNOG ortholog2880.D7G1T3
Model size1593
Hectar predicted targeting categorysignal peptide
Exons4
EggNOG free text desc.CpeT/CpcT family (DUF1001)
EggNOG OGs2CBDP@1,2SAUK@2759
Cds size1266
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1373.2931.1prot_Ecto-sp13_S_contig1373.2931.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig1373 4708..7774 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462732.7041569-UTR-Ecto-sp13_S_contig1373:4671..47071681462732.7041569-UTR-Ecto-sp13_S_contig1373:4671..4707Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1373 4672..4707 +
1681462732.7612646-UTR-Ecto-sp13_S_contig1373:7774..80651681462732.7612646-UTR-Ecto-sp13_S_contig1373:7774..8065Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1373 7775..8065 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462732.7173524-CDS-Ecto-sp13_S_contig1373:4707..48031681462732.7173524-CDS-Ecto-sp13_S_contig1373:4707..4803Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1373 4708..4803 +
1681462732.726869-CDS-Ecto-sp13_S_contig1373:5459..55881681462732.726869-CDS-Ecto-sp13_S_contig1373:5459..5588Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1373 5460..5588 +
1681462732.7353218-CDS-Ecto-sp13_S_contig1373:6295..65771681462732.7353218-CDS-Ecto-sp13_S_contig1373:6295..6577Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1373 6296..6577 +
1681462732.7493794-CDS-Ecto-sp13_S_contig1373:7015..77741681462732.7493794-CDS-Ecto-sp13_S_contig1373:7015..7774Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1373 7016..7774 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig1373.2931.1

>prot_Ecto-sp13_S_contig1373.2931.1 ID=prot_Ecto-sp13_S_contig1373.2931.1|Name=mRNA_Ecto-sp13_S_contig1373.2931.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=422bp
MMQRVVLLLFQIVPSASLLVSWTAARSRLSQKVQRSCTSVDSHTPGGGLS
GGEPRDAMISELLQLFQGEFDNYDQVVADRKAGMTPGPGGGHEHIHCSLK
RLDPAEVPGQVAAAAAAPPASRSSSGDAGQGAQQQQPERPLAVVAAKYYF
NGDSNVVFRYRLYSFHACPPNTPGARGEAVMRLWRLLPHVEARLRTNSYD
LTSFSWSDDDTNQREPGRGSDDVSSERCSKEGRTGDDVVERIFGCEIYWG
RHQAGGEDEKTMPGGISGPGKRDTNGGAVPERGAGGDAAGGGGPPPVGGK
SFVGLMGEDDGGTWVESQNVDGLEILVKDDLRLWPDRLWVNDRGFDRQGN
FVYGNQRDVPYKMRRVTAGGPLEWTLGARHRTEKTYADKMSAIGVTPGQR
VGPPVRVAAPAGTGGTGGGGG*
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mRNA from alignment at Ecto-sp13_S_contig1373:4672..8065+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig1373.2931.1 ID=mRNA_Ecto-sp13_S_contig1373.2931.1|Name=mRNA_Ecto-sp13_S_contig1373.2931.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3394bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1373:4672..8065+ (Ectocarpus species13 EcNAP12_S_4_19m)
AGTAGCAGCATCAGCACCCTCTGGCCGCTGAACCCGATGATGCAGCGTGT TGTGCTGCTGCTGTTTCAGATTGTTCCTTCTGCTAGCCTGCTCGTCTCGT GGACCGCAGCAAGGTCTCGCTTGTCACAAAAGGTGAGCCCAGCCCACAGG AAGGACATGCGTCCGGAAACCTTTGCTGCTTCTCCACGGAGGGAGCAGCC ACAACGTCCACTGGCGTATCATCATGTCCCCCCAACGCTGTTGCTGTGCA CACGCTACTACTGTCTCACATAGTAGCGATCGATTACGCCTTGGATCATC CTAGTTGTGGACAGGTTTCCTTTGTACGGCTTGAACTCGGGCACATATTA CTGAGGTGTCGCATCCGAAATCCTACCGCAATATCCAGTGAAGTTGCAGC TGTAGAATGTACACGTACCAGGTAGCAGGTAGTAGGCACGGACGGTGATC AGCCTTGAGTCAAGCATGTCCACCATAGACGACAAAGTATAGTCAACTTG GGGTTTCAACCAAAGCCCGTGGAGGTTAGCACGGATGTAGTCGGAGCACA ACCACGGTCTGCTCTGTAGACTACATAACGTTTACCGCTCTACATGAATA TGATATAATCAAACAATGGGACCCCCGTCGGTTGTCGCCGCCGCCCTCGG CGTGGGTTGGTGTCTGCTTTTCATGCTTCCTGAGGCCATCCACTGGGACC AATTGTTGATGAAACGCGGGGTTTGCGCACGCATCGAATCATCGTGTGCT ACTGTTGGTGGTGGTGCTGCTGCTGCTGCTAACGGTAGGTGCAACGATCA TGTACCAGTGTTGATTCTCATACGCCTGGAGGAGGACTAAGCGGCGGCGA GCCTCGAGATGCGATGATAAGCGAGCTGCTGCAGCTCTTTCAGGGGGAAT TCGACAACTATGATCAGGTGGGGGGACGATAGCATTCGATTCTTCTTTTC GTTCATGCCGAGATGGTCTTGGAAAACGGGTTCGTGCCGTCAAGTTTGTG TTGCCGATGGGACTTGCGCTGCGCACGACGTCGGACTCGTTGAGCTAGCC ATTCGGTCCATCACCTAATGCTCGATTGGTTCGGTTGTGAATTCAGAAAT GCACGCTACTGTCTTGCGACGGTTTTACGCAATAGTTGTTTTTGCTCATC ATGTCCCATCCCATCTTCATTCCCCAAGGTGCACTGATCAAGCGCGTGTG GTCGCACGATGGCTAAGTCACATTGTGAATTCTTCAGGTACAGACAATCC AGACGGTGCATAACCGGACAGAATTAGATTCCTCTCCACTGAAGAAAAAT AAATATCACAACAGTCGTCGAGCACGCTCGCCGATGCTGCTCTTCGTAGT GGAGCAACCAGCCGGAGCTAACTTCAGGGGTAACCATTGCCATTCCTTCC TCCGATGGCCCTCCAGTATTTCCCTCCACACACCACACACACATTGCGCT GATGGATGCGTCAGGGTGGGCTACGACCGGTCACCACAGCAGTTCCTACC TACCCAGCTCTGTTTCGACTACCCAACCGGCATCCCCCCTTACACATGCA GGTGCACAGCAGTTCATACCTACCCAGCTCTGTTTCGACCACCCAACCGG CACCCCCCCCCCCTGCACATGCAGGTAGTCGCAGACCGCAAGGCCGGCAT GACGCCTGGGCCTGGGGGAGGCCACGAGCACATCCACTGCAGCTTGAAGC GGCTCGACCCCGCCGAAGTTCCCGGGCAAGTCGCCGCGGCAGCGGCGGCA CCCCCCGCTAGTAGGAGCTCCAGCGGCGACGCGGGGCAGGGGGCGCAGCA GCAGCAGCCTGAACGGCCCCTGGCGGTGGTGGCGGCGAAGTATTACTTCA ACGGCGACTCGAACGTGGTGTTCCGGTATCGCCTGTACAGCTTTCACGCG TGTCCGGTGAGAACACGGGGTGTTTTGGTGGCAGCAGCAGTGGGCGCGTT GGGGGGGGCGGGGGGCGTACTCATCATGTTTTGCAGCCTTTGATGCCTGA ACCATTGACCACGCGTCCTCGAGAGGCCGAAGCAGTGTCTCGTTGGGTGT GTGGGTGGGGACATGAATCCATCGCTGGTGTGAAAGTGTTGGCATTGCTG TTTTCCTTCACCCATGTTGTTGGTTTCGTGGTAAAACTTTCTGTTTTCTC AACTACTAGTATGAAATTTCATTTTTCACAACAAGGCACCATTATTGTGT GGAAGGGGGCACTCGGTTGTACATCCACTCGAACGTACAGAGATATCCTC GTGAGTTTGCGGCACTCGAGACAAAGGAACGCATCATGTTCCCCCGTCCT CAAGGCCCCACCCTGCATCCATCTATCCACTATACCTCGTACAGCCGAAC ACGCCCGGAGCGAGAGGAGAAGCTGTCATGCGTCTCTGGAGACTGCTCCC CCACGTGGAAGCCCGCCTCAGGACCAACAGCTATGACCTCACCTCGTTCT CCTGGTCCGACGATGATACTAATCAGAGGGAGCCTGGACGAGGGAGTGAT GACGTCAGCAGCGAGCGTTGCTCGAAAGAGGGCCGAACCGGCGACGACGT CGTGGAGCGCATTTTTGGGTGCGAGATCTACTGGGGCAGGCATCAGGCGG GGGGCGAGGACGAGAAAACCATGCCTGGGGGGATTTCAGGGCCGGGGAAA CGGGACACCAACGGGGGTGCAGTTCCCGAGCGAGGGGCGGGCGGAGACGC AGCCGGAGGAGGAGGGCCTCCTCCCGTCGGGGGGAAGTCCTTCGTGGGGC TAATGGGGGAGGACGACGGCGGGACGTGGGTCGAGTCACAAAACGTCGAC GGCCTCGAGATCCTCGTCAAGGACGACCTCAGGCTGTGGCCGGACCGCCT GTGGGTCAACGACCGCGGCTTCGACCGCCAGGGGAACTTCGTCTACGGGA ACCAGCGCGACGTGCCCTACAAGATGAGGAGGGTCACCGCCGGGGGACCC CTAGAGTGGACCCTGGGGGCGCGGCATCGGACCGAGAAAACGTACGCCGA CAAAATGTCCGCCATCGGGGTGACCCCGGGGCAGCGGGTAGGGCCCCCCG TTCGCGTCGCCGCGCCGGCCGGCACGGGCGGCACCGGCGGCGGCGGCGGC TAGCACGCGTAGGTACGCTTTTCATTGGCCGGCGACCGGCGTTGGACACG CCCACAGCTTCTCCGTGGAATATTTTTTTGCACGGAGTCGCTTTGAATGC GGCACCTTCTGGAACGAAATGTCGTCTTTTTTCAGAGCGTTTCACGGAGC AGTTTCGTGTTGGCGAACGAAAGTGAAGGTCTCTTCGTCTTGGCATGTCC GATCCCGATGAGTTGTAACTATAACCACACTTTTTTTTTGTTTCTGCCAT GGTGTTGGGTGGTGTCGTGCCGAACAGAAAATGTTGGTGACGAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1373:4672..8065+

>mRNA_Ecto-sp13_S_contig1373.2931.1 ID=mRNA_Ecto-sp13_S_contig1373.2931.1|Name=mRNA_Ecto-sp13_S_contig1373.2931.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1266bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1373:4672..8065+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGATGCAGCGTGTTGTGCTGCTGCTGTTTCAGATTGTTCCTTCTGCTAG
CCTGCTCGTCTCGTGGACCGCAGCAAGGTCTCGCTTGTCACAAAAGGTGC
AACGATCATGTACCAGTGTTGATTCTCATACGCCTGGAGGAGGACTAAGC
GGCGGCGAGCCTCGAGATGCGATGATAAGCGAGCTGCTGCAGCTCTTTCA
GGGGGAATTCGACAACTATGATCAGGTAGTCGCAGACCGCAAGGCCGGCA
TGACGCCTGGGCCTGGGGGAGGCCACGAGCACATCCACTGCAGCTTGAAG
CGGCTCGACCCCGCCGAAGTTCCCGGGCAAGTCGCCGCGGCAGCGGCGGC
ACCCCCCGCTAGTAGGAGCTCCAGCGGCGACGCGGGGCAGGGGGCGCAGC
AGCAGCAGCCTGAACGGCCCCTGGCGGTGGTGGCGGCGAAGTATTACTTC
AACGGCGACTCGAACGTGGTGTTCCGGTATCGCCTGTACAGCTTTCACGC
GTGTCCGCCGAACACGCCCGGAGCGAGAGGAGAAGCTGTCATGCGTCTCT
GGAGACTGCTCCCCCACGTGGAAGCCCGCCTCAGGACCAACAGCTATGAC
CTCACCTCGTTCTCCTGGTCCGACGATGATACTAATCAGAGGGAGCCTGG
ACGAGGGAGTGATGACGTCAGCAGCGAGCGTTGCTCGAAAGAGGGCCGAA
CCGGCGACGACGTCGTGGAGCGCATTTTTGGGTGCGAGATCTACTGGGGC
AGGCATCAGGCGGGGGGCGAGGACGAGAAAACCATGCCTGGGGGGATTTC
AGGGCCGGGGAAACGGGACACCAACGGGGGTGCAGTTCCCGAGCGAGGGG
CGGGCGGAGACGCAGCCGGAGGAGGAGGGCCTCCTCCCGTCGGGGGGAAG
TCCTTCGTGGGGCTAATGGGGGAGGACGACGGCGGGACGTGGGTCGAGTC
ACAAAACGTCGACGGCCTCGAGATCCTCGTCAAGGACGACCTCAGGCTGT
GGCCGGACCGCCTGTGGGTCAACGACCGCGGCTTCGACCGCCAGGGGAAC
TTCGTCTACGGGAACCAGCGCGACGTGCCCTACAAGATGAGGAGGGTCAC
CGCCGGGGGACCCCTAGAGTGGACCCTGGGGGCGCGGCATCGGACCGAGA
AAACGTACGCCGACAAAATGTCCGCCATCGGGGTGACCCCGGGGCAGCGG
GTAGGGCCCCCCGTTCGCGTCGCCGCGCCGGCCGGCACGGGCGGCACCGG
CGGCGGCGGCGGCTAG
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