mRNA_Ecto-sp13_S_contig13632.2872.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig13632.2872.1 vs. uniprot
Match: A0A6H5KC05_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC05_9PHAE) HSP 1 Score: 250 bits (639), Expect = 4.460e-80 Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 1
Query: 1 VLSKFGIESEEPYKIHVCDECYRSLARNILPDAALANGFWVGTLPDELQKATFVERAAAYPIRTKGHVVALESRRVNNIPGTAKRSMRGTSVFYANNSSSVATELPLAATGLLDMITVVLAGKKKP 378
VLSKFGIESEEPYKIHVCDECYRSLARNILPDAALANGFWVGTLPDELQKATFVERAAAYPIRTKGHVVALESRRVNNIPGTAKRSMRGTSVFYANNSSSVATELPLAATGLLDMITVVLAGKKKP
Sbjct: 135 VLSKFGIESEEPYKIHVCDECYRSLARNILPDAALANGFWVGTLPDELQKATFVERAAAYPIRTKGHVVALESRRVNNIPGTAKRSMRGTSVFYANNSSSVATELPLAATGLLDMITVVLAGKKKP 260
BLAST of mRNA_Ecto-sp13_S_contig13632.2872.1 vs. uniprot
Match: A0A6H5K1H7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1H7_9PHAE) HSP 1 Score: 249 bits (635), Expect = 1.360e-73 Identity = 135/160 (84.38%), Postives = 136/160 (85.00%), Query Frame = 1
Query: 1 VLSKFGIESEEPYKIHVCDECYRSLARNILPDAALANGFWVGTLPDELQKATFVERAAAYPIRTKGHVVALESRRVNNIPGTAKRSMRGTSVFYANNSSSVATELPLAATGLLDMITVVLAGKKKPKTSDLGRLLGARKSMIRDISTTCSTKKRNLSSGF 480
VLSKFGIESEEPYKIHVCDECYR LARN VGTLPDELQKATFVERAAAYPIRTKGHVVALESRRVNNIPGTAKRSMRGTSVFYANNSSSVATELPLAATGLLDMITVVLAGKKKPKTSDLGRLLGARKSMIRDI + L GF
Sbjct: 131 VLSKFGIESEEPYKIHVCDECYRWLARNR-----------VGTLPDELQKATFVERAAAYPIRTKGHVVALESRRVNNIPGTAKRSMRGTSVFYANNSSSVATELPLAATGLLDMITVVLAGKKKPKTSDLGRLLGARKSMIRDIIDYMLDNEEKLVVGF 279
BLAST of mRNA_Ecto-sp13_S_contig13632.2872.1 vs. uniprot
Match: A0A6H5K101_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K101_9PHAE) HSP 1 Score: 202 bits (514), Expect = 1.290e-60 Identity = 116/160 (72.50%), Postives = 117/160 (73.12%), Query Frame = 1
Query: 1 VLSKFGIESEEPYKIHVCDECYRSLARNILPDAALANGFWVGTLPDELQKATFVERAAAYPIRTKGHVVALESRRVNNIPGTAKRSMRGTSVFYANNSSSVATELPLAATGLLDMITVVLAGKKKPKTSDLGRLLGARKSMIRDISTTCSTKKRNLSSGF 480
VLSKFGIESEEPYKIH KATFVERAAAYPIRTKGHVVALESRRVNNIPGTAKRSMRGTSVFYANNSSSVATELPLAATGLLDMITVVLAGKKKPKTSDLGRLLGARKSMIRDI K+ L GF
Sbjct: 171 VLSKFGIESEEPYKIH---------------------------------KATFVERAAAYPIRTKGHVVALESRRVNNIPGTAKRSMRGTSVFYANNSSSVATELPLAATGLLDMITVVLAGKKKPKTSDLGRLLGARKSMIRDIIDYMLDKEEKLVVGF 297
BLAST of mRNA_Ecto-sp13_S_contig13632.2872.1 vs. uniprot
Match: A0A6H5KP43_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP43_9PHAE) HSP 1 Score: 153 bits (386), Expect = 4.650e-43 Identity = 87/127 (68.50%), Postives = 98/127 (77.17%), Query Frame = 1
Query: 193 KGHVVALESRRVNNIPGTAKRSMRGTSVFYANNSSSVATELPLAATGLLDMITVVLAGKKKPKTSDLGRLLGARKSMIRDISTTCSTKKRNLSSGF-LWRNLFLSVKRISIRIARMALSQRCCWIQF 570
+ H+ A +RRVNNIPGTAKRSMRGTSVFYA NSSSVATELPLAATGLLDMITVVLAGKKKPKTSDLGRLLGARKSMIRDI K+ L GF L ++L +S +++ A+ RCCWI F
Sbjct: 120 RDHMFAGSTRRVNNIPGTAKRSMRGTSVFYAKNSSSVATELPLAATGLLDMITVVLAGKKKPKTSDLGRLLGARKSMIRDIIDYMLDKEEKLVVGFPLAKSLPISEEKLDSYSENGAIP-RCCWIHF 245
BLAST of mRNA_Ecto-sp13_S_contig13632.2872.1 vs. uniprot
Match: A0A6H5KIB1_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIB1_9PHAE) HSP 1 Score: 133 bits (334), Expect = 1.600e-32 Identity = 67/147 (45.58%), Postives = 95/147 (64.63%), Query Frame = 1
Query: 1 VLSKFGIESEEPYKIHVCDECYRSLARNILPDAALANGFWVGTLPDELQKATFVERAAAYPIRTKGHVVALESRRVNNIPGTAKRSMRGTSVFYANNSSSVATELPLAATGLLDMITVVLAGKKKPKTSDLGRLLGARKSMIRDIST 441
VL + G E++ P+++ VC EC+R L+RN +P+AALANG W+G P+ L+ A+FVE AA P+R G V+AL+ +V NI G+AK MR T FY ++ V +LP + IT+VL G + L RLLGAR+SMI D++T
Sbjct: 249 VLERLGFEADPPHRLRVCAECFRDLSRNRMPEAALANGLWLGEFPEHLRSASFVELIAASPVRVSGIVLALDELKVGNIAGSAKSLMRSTFTFYMQDAYGVQLKLPACDADIAGSITIVLVGANATP-AQLRRLLGARRSMIEDLNT 394
BLAST of mRNA_Ecto-sp13_S_contig13632.2872.1 vs. uniprot
Match: D7G3U9_ECTSI (ATP-dependent DNA helicase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3U9_ECTSI) HSP 1 Score: 128 bits (322), Expect = 6.460e-31 Identity = 64/145 (44.14%), Postives = 89/145 (61.38%), Query Frame = 1
Query: 1 VLSKFGIESEEPYKIHVCDECYRSLARNILPDAALANGFWVGTLPDELQKATFVERAAAYPIRTKGHVVALESRRVNNIPGTAKRSMRGTSVFYANNSSSVATELPLAATGLLDMITVVLAGKKKPKTSDLGRLLGARKSMIRDI 435
VL + G ES PY++ VC EC +SL + +P+AALANG W+G P+ L+ ATFVE AA P+R G V+AL+ + ++ G+AK MRGT FY ++ V LP T + T L G K P + L RLLGAR+ M++D+
Sbjct: 284 VLERLGFESTSPYRMQVCKECLQSLLKKRIPEAALANGLWLGDFPEHLRSATFVEMIAASPVRISGMVLALDELKTGSVSGSAKSQMRGTFTFYMQDAYGVQLRLPACDTDIAGSFTCALVGCK-PNLAQLRRLLGARRQMVQDL 427
BLAST of mRNA_Ecto-sp13_S_contig13632.2872.1 vs. uniprot
Match: A0A6H5K8N9_9PHAE (Helitron_like_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8N9_9PHAE) HSP 1 Score: 124 bits (310), Expect = 2.500e-29 Identity = 62/145 (42.76%), Postives = 87/145 (60.00%), Query Frame = 1
Query: 1 VLSKFGIESEEPYKIHVCDECYRSLARNILPDAALANGFWVGTLPDELQKATFVERAAAYPIRTKGHVVALESRRVNNIPGTAKRSMRGTSVFYANNSSSVATELPLAATGLLDMITVVLAGKKKPKTSDLGRLLGARKSMIRDI 435
VL++ G + + P+ + VC EC SL ++ +P+AALANG W+G PD L+ ATFVE AA P+R G V+AL+ +V N+ G+AK MRGT FY ++ V LP T + T L G K P L +L GAR+ M+ D+
Sbjct: 88 VLARQGFQPDAPHHLRVCQECLNSLLKDKMPEAALANGLWLGDFPDHLRGATFVEMMAASPVRISGMVLALDELKVGNVRGSAKSLMRGTFTFYMQDAYGVQLRLPACDTDIAGSFTCALVGAK-PSVGQLRKLFGARRKMVEDL 231
BLAST of mRNA_Ecto-sp13_S_contig13632.2872.1 vs. uniprot
Match: A0A6H5L0L4_9PHAE (Helitron_like_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0L4_9PHAE) HSP 1 Score: 124 bits (310), Expect = 2.570e-29 Identity = 62/145 (42.76%), Postives = 87/145 (60.00%), Query Frame = 1
Query: 1 VLSKFGIESEEPYKIHVCDECYRSLARNILPDAALANGFWVGTLPDELQKATFVERAAAYPIRTKGHVVALESRRVNNIPGTAKRSMRGTSVFYANNSSSVATELPLAATGLLDMITVVLAGKKKPKTSDLGRLLGARKSMIRDI 435
VL++ G + + P+ + VC EC SL ++ +P+AALANG W+G PD L+ ATFVE AA P+R G V+AL+ +V N+ G+AK MRGT FY ++ V LP T + T L G K P L +L GAR+ M+ D+
Sbjct: 168 VLARQGFQPDAPHHLRVCQECLNSLLKDKMPEAALANGLWLGDFPDHLRGATFVEMMAASPVRISGMVLALDELKVGNVRGSAKSLMRGTFTFYMQDAYGVQLRLPACDTDIAGSFTCALVGAK-PSVGQLRKLFGARRKMVEDL 311
BLAST of mRNA_Ecto-sp13_S_contig13632.2872.1 vs. uniprot
Match: A0A6H5KTA2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTA2_9PHAE) HSP 1 Score: 119 bits (299), Expect = 8.040e-28 Identity = 65/145 (44.83%), Postives = 88/145 (60.69%), Query Frame = 1
Query: 1 VLSKFGIESEEPYKIHVCDECYRSLARNILPDAALANGFWVGTLPDELQKATFVERAAAYPIRTKGHVVALESRRVNNIPGTAKRSMRGTSVFYANNSSSVATELPLAATGLLDMITVVLAGKKKPKTSDLGRLLGARKSMIRDI 435
VL++ G ES +++ VC EC R L N P A LANG WVG P+ L+ +T+VE AAA P+RT G V ALE +V IPG+A R MRGT F+ N+ V LP T + +T L G + P + L +LLGAR+S I+++
Sbjct: 2286 VLAREGFESGPLHRLRVCSECLRDLNSNKTPYATLANGLWVGDFPEHLKDSTWVEMAAASPVRTSGMVFALEQLKVGAIPGSAHRMMRGTFTFFFQNAYGVEKVLPTCDTDIAGSMTCALVGAR-PTEAQLRKLLGARRSRIQEL 2429
BLAST of mRNA_Ecto-sp13_S_contig13632.2872.1 vs. uniprot
Match: A0A6H5K657_9PHAE (Helitron_like_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K657_9PHAE) HSP 1 Score: 111 bits (278), Expect = 2.650e-25 Identity = 60/74 (81.08%), Postives = 61/74 (82.43%), Query Frame = 1
Query: 259 MRGTSVFYANNSSSVATELPLAATGLLDMITVVLAGKKKPKTSDLGRLLGARKSMIRDISTTCSTKKRNLSSGF 480
MRGTSVFYANNSSSV TELPL ATGLLDMITVVLAGKK PKTSDLGRLLGARKSMIRDI K+ L GF
Sbjct: 1 MRGTSVFYANNSSSVTTELPLVATGLLDMITVVLAGKKNPKTSDLGRLLGARKSMIRDIIDYMLDKEEKLVVGF 74 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13632.2872.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig13632.2872.1 >prot_Ecto-sp13_S_contig13632.2872.1 ID=prot_Ecto-sp13_S_contig13632.2872.1|Name=mRNA_Ecto-sp13_S_contig13632.2872.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=191bp VLSKFGIESEEPYKIHVCDECYRSLARNILPDAALANGFWVGTLPDELQKback to top mRNA from alignment at Ecto-sp13_S_contig13632:3561..4133- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig13632.2872.1 ID=mRNA_Ecto-sp13_S_contig13632.2872.1|Name=mRNA_Ecto-sp13_S_contig13632.2872.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=573bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13632:3561..4133- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig13632:3561..4133- >mRNA_Ecto-sp13_S_contig13632.2872.1 ID=mRNA_Ecto-sp13_S_contig13632.2872.1|Name=mRNA_Ecto-sp13_S_contig13632.2872.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=573bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13632:3561..4133- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |