mRNA_Ecto-sp13_S_contig13623.2862.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig13623.2862.1
Unique NamemRNA_Ecto-sp13_S_contig13623.2862.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig13623.2862.1 vs. uniprot
Match: A0A6H5KLW9_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLW9_9PHAE)

HSP 1 Score: 514 bits (1324), Expect = 4.470e-183
Identity = 256/265 (96.60%), Postives = 258/265 (97.36%), Query Frame = 1
Query:    1 MMESGTMAGASSDFNEDWEDWDPSQGNFLHHMVAGSIAGITEHTVMYPVDTFKTYVQCMRECPEAVAGRRVMELVRGQGMLRLWRGVGTMFTGCVPAHALYFSVLEYCKDRLGVNQPGHQPAGAAVAGAAATVFHDAVMTPMDVVKQRLQLGYHKGMLDCVLTIQRTEGTQAFYRSFPTTLFMNIPYGCVMVAANESLKRVMRPAGDYDTKTFLLAGSGAGAVAAVATTPLDVVKTRLQTQAFRGAAAPLAARSEGFAAPKEGAA 795
            M ESGTMAGASSDFNEDWEDWDPSQGNFLHHMVAGSIAGITEHTVMYPVDTFKTYVQCMRECPEAVAGRRVME+VRGQGMLRLWRGVGTMFTGCVPAHALYFSVLE CKDRLGVNQPGHQPAGAAVAGAAATVFHDAVMTPMDVVKQRLQLGYHKGMLDCVLTIQRTEGTQAFYRSFPTTLFMNIPYGCVMVA NESLKRVMRPAGDYD KTFLLAGSGAGA+AAVAT PLDVVKTRLQTQAFRG AAP AARSEGFAAPKEGAA
Sbjct:    1 MAESGTMAGASSDFNEDWEDWDPSQGNFLHHMVAGSIAGITEHTVMYPVDTFKTYVQCMRECPEAVAGRRVMEMVRGQGMLRLWRGVGTMFTGCVPAHALYFSVLENCKDRLGVNQPGHQPAGAAVAGAAATVFHDAVMTPMDVVKQRLQLGYHKGMLDCVLTIQRTEGTQAFYRSFPTTLFMNIPYGCVMVAVNESLKRVMRPAGDYDAKTFLLAGSGAGAIAAVATNPLDVVKTRLQTQAFRGVAAPQAARSEGFAAPKEGAA 265          
BLAST of mRNA_Ecto-sp13_S_contig13623.2862.1 vs. uniprot
Match: A0A835YZ17_9STRA (Mitoferrin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ17_9STRA)

HSP 1 Score: 377 bits (968), Expect = 1.010e-127
Identity = 206/309 (66.67%), Postives = 227/309 (73.46%), Query Frame = 1
Query:   49 DWEDWDPSQGNFLHHMVAGSIAGITEHTVMYPVDTFKTYVQCMRECPEAVAGRRVMELVRGQGMLRLWRGVGTMFTGCVPAHALYFSVLEYCKDRLGVNQPGHQPAGAAVAGAAATVFHDAVMTPMDVVKQRLQLGYHKGMLDCVLTIQRTEGTQAFYRSFPTTLFMNIPYGCVMVAANESLKRVMRPAGDYDTKTFLLAGSGAGAVAAVATTPLDVVKTRLQTQAF-----RGAAAPLAARSEGFA--------APKEGAAGTG-----------LHS-AAARCATGRCGADKPVVALQYQGLVDAVR 900
            DWEDW   +GNF+HHM+AGSIAGITEHTVM+PVDT KT++QCMRECPE  AG RV+E+VRGQGMLRLWRGVGTMF GCVPAHA YFSVLE  K R G N  GH+P  AA AG  ATVFHDA MTPMDV+KQRLQLGY++G+ DCV TI RTEG +A YRSFPTTLFMNIPYG VMVAANESLK  +RP GD+ T TF+ AG GAGAVAA ATTPLDVVKTRLQTQA      R  AAP A    G            ++G AG G            HS AA RCA G CG +KP V LQY+GLVDAVR
Sbjct:   13 DWEDWS-GEGNFVHHMLAGSIAGITEHTVMFPVDTIKTHIQCMRECPERQAGARVLEMVRGQGMLRLWRGVGTMFMGCVPAHAAYFSVLEASKSRFGANAGGHKPVAAAAAGGLATVFHDAFMTPMDVIKQRLQLGYYRGIGDCVRTIVRTEGARALYRSFPTTLFMNIPYGAVMVAANESLKTALRPRGDHTTATFMAAGCGAGAVAAAATTPLDVVKTRLQTQALLTAAGRAHAAPAAHSGNGLGKLPVLLGRGLRQGGAGAGGGAVAAAMPAVFHSNAAGRCAKG-CG-EKPEVPLQYRGLVDAVR 318          
BLAST of mRNA_Ecto-sp13_S_contig13623.2862.1 vs. uniprot
Match: A0A835Z185_9STRA (Mitoferrin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z185_9STRA)

HSP 1 Score: 367 bits (943), Expect = 6.750e-124
Identity = 201/319 (63.01%), Postives = 224/319 (70.22%), Query Frame = 1
Query:   49 DWEDWDPSQGNFLHHMVAGSIAGITEHTVMYPVDTFKTYVQCMRECPEAVAGRRVMELVRGQGMLRLWRGVGTMFTGCVPAHALYFSVLEYCKDRLGVNQPGHQPAGAAVAGAAATVFHDAVMTPMDVVKQRLQLGYHKGMLDCVLTIQRTEGTQAFYRSFPTTLFMNIPYGCVMVAANESLKRVMRPAGDYDTKTFLLAGSGAGAVAAVATTPLDVVKTRLQTQAFRGAAAPLAARSEGFAAPKEGA---------AGTGLHS--------------------------AAARCATGRCGADKPVVALQYQGLVDAVR 900
            DWEDW   +GNF+HHM+AGSIAG+TEHTVM+PVDT KT++QCMRECPE  AG RV+E+VRGQGMLRLWRGVGTMF GCVPAHA YFS+LE CK+R G N  GH P  AA AG  ATVFHDAVMTPMDV+KQRLQLGY++G+ DCV TI R EG  A YRSFPTTLFMNIPYG +MVAANESLK  +RP GD+ T T++LAG GAGAVAA ATTPLDVVKT LQTQA    A   AA +   AAP   A         AGT L S                          AAARC  G CG +KP V LQY+G VDA R
Sbjct:   13 DWEDWS-GEGNFVHHMLAGSIAGVTEHTVMFPVDTLKTHIQCMRECPERQAGSRVLEMVRGQGMLRLWRGVGTMFVGCVPAHAAYFSILELCKERFGANGGGHAPVAAAAAGVFATVFHDAVMTPMDVIKQRLQLGYYRGIGDCVRTIARAEGVGALYRSFPTTLFMNIPYGAIMVAANESLKTALRPRGDHTTATYMLAGCGAGAVAAAATTPLDVVKTMLQTQAIHAHATRYAAAA---AAPHVAAPAXXXXPIFAGTALASSGLLRRACAAPAGATVALMPAVFHSNAAARCIQG-CG-EKPEVKLQYRGFVDAAR 325          
BLAST of mRNA_Ecto-sp13_S_contig13623.2862.1 vs. uniprot
Match: D7G8Z1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8Z1_ECTSI)

HSP 1 Score: 358 bits (920), Expect = 4.030e-122
Identity = 185/192 (96.35%), Postives = 186/192 (96.88%), Query Frame = 1
Query:  325 KDRLGVNQPGHQPAGAAVAGAAATVFHDAVMTPMDVVKQRLQLGYHKGMLDCVLTIQRTEGTQAFYRSFPTTLFMNIPYGCVMVAANESLKRVMRPAGDYDTKTFLLAGSGAGAVAAVATTPLDVVKTRLQTQAFRGAAAPLAARSEGFAAPKEGAAGTGLHSAAARCATGRCGADKPVVALQYQGLVDAVR 900
            +DRLGVNQPGHQP GAAVAGAAATVFHDAVMTPMDVVKQRLQLGYHKGMLDCVLTIQRTEGTQAFYRSFPTTLFMNIPYGCVMVA NESLK VMRPAGDYDTKTFLLAGSGAGAVAAVAT PLDVVKTRLQTQAFRGAAAPLAARSEGFAAPKEGA GTGLHSAAARCATGRCGADKPVV LQYQGLVDAVR
Sbjct:   13 QDRLGVNQPGHQPTGAAVAGAAATVFHDAVMTPMDVVKQRLQLGYHKGMLDCVLTIQRTEGTQAFYRSFPTTLFMNIPYGCVMVAVNESLKHVMRPAGDYDTKTFLLAGSGAGAVAAVATNPLDVVKTRLQTQAFRGAAAPLAARSEGFAAPKEGATGTGLHSAAARCATGRCGADKPVVTLQYQGLVDAVR 204          
BLAST of mRNA_Ecto-sp13_S_contig13623.2862.1 vs. uniprot
Match: A0A7S3Y5E3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y5E3_HETAK)

HSP 1 Score: 304 bits (779), Expect = 8.200e-100
Identity = 147/238 (61.76%), Postives = 176/238 (73.95%), Query Frame = 1
Query:   49 DWEDWDPSQGNFLHHMVAGSIAGITEHTVMYPVDTFKTYVQCMR---ECPEAVAGRR--VMELVRGQGMLRLWRGVGTMFTGCVPAHALYFSVLEYCKDRLGVNQPGHQPAGAAVAGAAATVFHDAVMTPMDVVKQRLQLGYHKGMLDCVLTIQRTEGTQAFYRSFPTTLFMNIPYGCVMVAANESLKRVMRPAGDYDTKTFLLAGSGAGAVAAVATTPLDVVKTRLQTQAFRGAAAP 747
            +WEDWDP +G+F  HMVAGS AG+ EH  MYP+DT KT+VQC +   EC      R    ++ ++ QGMLRLWRGV TM  GC+PAHA YFSV+E CK+  GVN+PGH P  AA  GA A+VFHD +MTP+DVVKQRLQLGY++G+ DC  T+ RTEG QAF+ S P TL MNIPYGC+MVA NESLKRV+RP GDYD  T + AG+GAGA A++ TTPLDVVKTRLQ Q      AP
Sbjct:   11 EWEDWDPEKGSFAVHMVAGSCAGVVEHCSMYPIDTLKTHVQCHKPRQECSSRFICRSFSAIDFIQKQGMLRLWRGVNTMILGCIPAHAAYFSVVELCKESFGVNRPGHHPLAAAATGAIASVFHDGIMTPLDVVKQRLQLGYYRGIRDCARTVYRTEGAQAFFVSLPITLAMNIPYGCIMVATNESLKRVLRPGGDYDLGTHMAAGTGAGAAASLVTTPLDVVKTRLQKQRVEPGQAP 248          
BLAST of mRNA_Ecto-sp13_S_contig13623.2862.1 vs. uniprot
Match: A0A7S3Y5R4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y5R4_HETAK)

HSP 1 Score: 305 bits (781), Expect = 9.550e-100
Identity = 150/238 (63.03%), Postives = 179/238 (75.21%), Query Frame = 1
Query:   49 DWEDWDPSQGNFLHHMVAGSIAGITEHTVMYPVDTFKTYVQCMR---ECPEAVAGRR--VMELVRGQGMLRLWRGVGTMFTGCVPAHALYFSVLEYCKDRLGVNQPGHQPAGAAVAGAAATVFHDAVMTPMDVVKQRLQLGYHKGMLDCVLTIQRTEGTQAFYRSFPTTLFMNIPYGCVMVAANESLKRVMRPAGDYDTKTFLLAGSGAGAVAAVATTPLDVVKTRLQTQ-AFRGAAA 744
            +WEDWDP +G+F  HMVAGS AG+ EH  MYP+DT KT+VQC +   EC      R    ++ ++ QGMLRLWRGV TM  GC+PAHA YFSV+E CK+  GVN+PGH P  AA  GA A+VFHD +MTP+DVVKQRLQLGY++G+ DC  T+ RTEG QAF+ S P TL MNIPYGC+MVA NESLKRV+RP GDYD  T + AG+GAGA A++ TTPLDVVKTRLQ Q A  GAAA
Sbjct:   11 EWEDWDPEKGSFAVHMVAGSCAGVVEHCSMYPIDTLKTHVQCHKPRQECSSRFICRSFSAIDFIQKQGMLRLWRGVNTMILGCIPAHAAYFSVVELCKESFGVNRPGHHPLAAAATGAIASVFHDGIMTPLDVVKQRLQLGYYRGIRDCARTVYRTEGAQAFFVSLPITLAMNIPYGCIMVATNESLKRVLRPGGDYDLGTHMAAGTGAGAAASLVTTPLDVVKTRLQVQRATAGAAA 248          
BLAST of mRNA_Ecto-sp13_S_contig13623.2862.1 vs. uniprot
Match: W7U8D3_9STRA (Mitoferrin-like protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U8D3_9STRA)

HSP 1 Score: 301 bits (771), Expect = 1.270e-96
Identity = 155/268 (57.84%), Postives = 186/268 (69.40%), Query Frame = 1
Query:   37 DFNEDWEDWDPSQGNFLHHMVAGSIAGITEHTVMYPVDTFKTYVQCMRECP---------------EAVAGRR------------------------VMELVRGQGMLRLWRGVGTMFTGCVPAHALYFSVLEYCKDRLGVNQPGHQPAGAAVAGAAATVFHDAVMTPMDVVKQRLQLGYHKGMLDCVLTIQRTEGTQAFYRSFPTTLFMNIPYGCVMVAANESLKRVMRPAGDYDTKTFLLAGSGAGAVAAVATTPLDVVKTRLQTQ 723
            D + DWEDWDP  G+F+HHM+AGSIAGI EHT+MYPVDT KT++QC +EC                 AV+GR                            LV+ +G LRLWRGV TM + CVPAHA YFS LE CK+R GVN   H   GAA AGA AT+FHD++MTPMDV+KQRLQLGY+KG+  C ++I R EG +AFY S P TLFMN+PYG VMVAANES+KR+++PAGDY T T+LLAGSGAGA+AA ATTPLD++KTRLQTQ
Sbjct:   27 DADLDWEDWDPKTGSFVHHMIAGSIAGIAEHTLMYPVDTIKTFMQC-QECSLTANCLKQRTVVAAAAAVSGREGLGEAAARGASVVEGSVGLTSFEAAFRLVQKEGTLRLWRGVSTMLSACVPAHAAYFSALESCKERFGVNGREHNVMGAAAAGAVATLFHDSIMTPMDVIKQRLQLGYYKGLAHCAVSIVRQEGVRAFYLSLPVTLFMNLPYGGVMVAANESIKRLLKPAGDYTTGTYLLAGSGAGALAAAATTPLDLIKTRLQTQ 293          
BLAST of mRNA_Ecto-sp13_S_contig13623.2862.1 vs. uniprot
Match: A0A7S2RU47_9STRA (Hypothetical protein (Fragment) n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RU47_9STRA)

HSP 1 Score: 262 bits (670), Expect = 1.650e-84
Identity = 130/227 (57.27%), Postives = 158/227 (69.60%), Query Frame = 1
Query:   46 EDWEDWDPSQGN-FLHHMVAGSIAGITEHTVMYPVDTFKTYVQCMRECPEAVAGRRVMELVRGQGMLRLWRGVGTMFTGCVPAHALYFSVLEYCKDRLGVNQPGHQPAGAAVAGAAATVFHDAVMTPMDVVKQRLQLGYHKGMLDCVLTIQRTEGTQAFYRSFPTTLFMNIPYGCVMVAANESLKRVMRPAGDYDTKTFLLAGSGAGAVAAVATTPLDVVKTRLQTQ 723
            E+WE+WDP  G  F  H +AGS AG  EH  ++P DT KT++Q      E  +   +  LVR +GM RLWRGV TMFT CVPAHA YFS+ E  K   G N+ GH P  AA +GA AT+ HD++MTPMDVVKQRLQLG++ GM DC  +I RTEG  AF+ SFPTTLFMNIPY  +MVA+NES K+V+ P  +Y+   F ++G  AGAVAA  T PLDVVKTRLQTQ
Sbjct:    9 EEWEEWDPESGTTFFVHAMAGSCAGAAEHCAIFPFDTIKTHMQA-----EGASSSSIRSLVRQEGMFRLWRGVSTMFTACVPAHAAYFSLFEQSKIYFGANEEGHHPVAAAASGAIATIAHDSIMTPMDVVKQRLQLGFYNGMSDCFWSIVRTEGAGAFFLSFPTTLFMNIPYAGIMVASNESFKKVLNPTNEYNLPVFFISGGMAGAVAAAFTNPLDVVKTRLQTQ 230          
BLAST of mRNA_Ecto-sp13_S_contig13623.2862.1 vs. uniprot
Match: K3X9N6_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X9N6_GLOUD)

HSP 1 Score: 254 bits (648), Expect = 2.180e-79
Identity = 138/301 (45.85%), Postives = 183/301 (60.80%), Query Frame = 1
Query:   43 NEDWEDWDPSQGNFLHHMVAGSIAGITEHTVMYPVDTFKTYVQCMRECP------EAVAGRRVMELVRGQGMLRLWRGVGTMFTGCVPAHALYFSVLEYCKDRLGVNQPGHQPAGAAVAGAAATVFHDAVMTPMDVVKQRLQLGYHKGMLDCVLTIQRTEGTQAFYRSFPTTLFMNIPYGCVMVAANESLKRVMRPAGDYDTKTFLLAGSGAGAVAAVATTPLDVVKTRLQTQAF----------RGAAAPLAARSEGFAAPKEGAAGTGLHSAAARCATGRCGADKPVVALQYQGLVDAV 897
            +EDWE+W P +G+FLHHM+AGS AG+ EH  ++P+DT KT++QC R CP      +  A     +L+  +G LRL+RGV TM +  +PAHA+YFSV E  K  LG +   H P  +  AG  ATV HD +MTPMDV+KQRLQLGY+ G+ DC  TI R EG +A Y SFPTT FMN+PY  +MV+ANE+ K+++ P+G+ +   +  +G+ AGA+A V T PLDV KTRLQTQ            R   + L  R      P      T  H  AA    G     +P + LQY+GL DA+
Sbjct:   21 DEDWEEWTPEKGSFLHHMLAGSAAGVAEHVSIFPIDTIKTHMQCQR-CPVNGKPLKLSATHTARKLIAEEGPLRLFRGVSTMLSASLPAHAVYFSVFESMKKTLGADSAEHTPIASGAAGVVATVCHDMIMTPMDVIKQRLQLGYYSGVTDCFKTIVRQEGLRALYISFPTTFFMNLPYSMIMVSANETFKKILNPSGEMNISAYFASGAMAGALAGVLTNPLDVAKTRLQTQMLLVQEDPSCPSRARCSQLQTRGVALTVPTSC---TIKHPVAATKTIG----GEPKMRLQYRGLFDAL 313          
BLAST of mRNA_Ecto-sp13_S_contig13623.2862.1 vs. uniprot
Match: A0A7S2V5B9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5B9_9STRA)

HSP 1 Score: 247 bits (631), Expect = 8.670e-78
Identity = 126/239 (52.72%), Postives = 165/239 (69.04%), Query Frame = 1
Query:   49 DWEDWDPSQGNFLHHMVAGSIAGITEHTVMYPVDTFKTYVQCMR---ECPEAVAGRRVMELVRGQGMLRLWRGVGTMFTGCVPAHALYFSVLEYCKDRLGVNQP----GHQPA--GAAVAGAAATVFHDAVMTPMDVVKQRLQLGYHK---GMLDCVLTIQRTEGTQAFYRSFPTTLFMNIPYGCVMVAANESLKRVMRPAGDYDTKTFLLAGSGAGAVAAVATTPLDVVKTRLQTQAF 729
            +WEDW+P+ G+F+ HM+AGS+AG+ EH  ++P+DT KT++QC R   +C E  A   V  L + +G+LRLWRGV TM  G +PAHA YFSV+E CK++ GVN      G   A  GA +AG  ATVFHD +MTPMDV+KQR+QLG      G+L C   I   EG  AF+RS PTTL MN+PYGC+ +A+NE++KR++RP GDYD +T ++AG+          TPLDVVKTRLQTQ F
Sbjct:    9 EWEDWNPANGSFISHMLAGSVAGVVEHISLFPLDTVKTHIQCHRAKADCMEC-AHTSVWRLCQREGLLRLWRGVSTMLFGSIPAHASYFSVIEICKEKFGVNDTHSGQGEWVAAVGAGMAGGIATVFHDGIMTPMDVIKQRMQLGLGGKGGGILKCAAHIASHEGLGAFFRSLPTTLVMNVPYGCITLASNETIKRILRPDGDYDLRTHMVAGAXXXXXXXXXXTPLDVVKTRLQTQNF 246          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13623.2862.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KLW9_9PHAE4.470e-18396.60Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A835YZ17_9STRA1.010e-12766.67Mitoferrin-like protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z185_9STRA6.750e-12463.01Mitoferrin-like protein n=1 Tax=Tribonema minus Ta... [more]
D7G8Z1_ECTSI4.030e-12296.35Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S3Y5E3_HETAK8.200e-10061.76Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S3Y5R4_HETAK9.550e-10063.03Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
W7U8D3_9STRA1.270e-9657.84Mitoferrin-like protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A7S2RU47_9STRA1.650e-8457.27Hypothetical protein (Fragment) n=1 Tax=labyrinthu... [more]
K3X9N6_GLOUD2.180e-7945.85Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A7S2V5B9_9STRA8.670e-7852.72Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13623contigEcto-sp13_S_contig13623:422..4565 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score366.3
Seed ortholog evalue1.4e-98
Seed eggNOG ortholog2880.D7G8Z1
Model size900
KEGG koko:K15113
KEGG TC2.A.29.5
Hectar predicted targeting categoryother localisation
GOsGO:0000041,GO:0003674,GO:0005215,GO:0005381,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0006810,GO:0006811,GO:0006812,GO:0006826,GO:0006839,GO:0008150,GO:0008324,GO:0015075,GO:0015318,GO:0016020,GO:0016021,GO:0019866,GO:0022857,GO:0022890,GO:0030001,GO:0031090,GO:0031224,GO:0031966,GO:0031967,GO:0031975,GO:0034220,GO:0034755,GO:0042592,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046873,GO:0046915,GO:0048250,GO:0048878,GO:0050801,GO:0051179,GO:0051234,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0055085,GO:0065007,GO:0065008,GO:0097286,GO:0098655,GO:0098660,GO:0098662,GO:0098771,GO:1990542
Exons4
EggNOG free text desc.iron import into the mitochondrion
EggNOG OGsKOG0760@1,KOG0760@2759
Ec32 ortholog descriptionMitochondrial carrier domain
Ec32 orthologEc-15_002540.1
Cds size900
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko02000,ko03029
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462727.414409-CDS-Ecto-sp13_S_contig13623:421..7481681462727.414409-CDS-Ecto-sp13_S_contig13623:421..748Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13623 422..748 +
1681462727.4292223-CDS-Ecto-sp13_S_contig13623:3474..36601681462727.4292223-CDS-Ecto-sp13_S_contig13623:3474..3660Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13623 3475..3660 +
1681462727.4427218-CDS-Ecto-sp13_S_contig13623:4064..43461681462727.4427218-CDS-Ecto-sp13_S_contig13623:4064..4346Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13623 4065..4346 +
1681462727.452582-CDS-Ecto-sp13_S_contig13623:4460..45651681462727.452582-CDS-Ecto-sp13_S_contig13623:4460..4565Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13623 4461..4565 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13623.2862.1prot_Ecto-sp13_S_contig13623.2862.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig13623 422..4565 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig13623.2862.1

>prot_Ecto-sp13_S_contig13623.2862.1 ID=prot_Ecto-sp13_S_contig13623.2862.1|Name=mRNA_Ecto-sp13_S_contig13623.2862.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=300bp
MMESGTMAGASSDFNEDWEDWDPSQGNFLHHMVAGSIAGITEHTVMYPVD
TFKTYVQCMRECPEAVAGRRVMELVRGQGMLRLWRGVGTMFTGCVPAHAL
YFSVLEYCKDRLGVNQPGHQPAGAAVAGAAATVFHDAVMTPMDVVKQRLQ
LGYHKGMLDCVLTIQRTEGTQAFYRSFPTTLFMNIPYGCVMVAANESLKR
VMRPAGDYDTKTFLLAGSGAGAVAAVATTPLDVVKTRLQTQAFRGAAAPL
AARSEGFAAPKEGAAGTGLHSAAARCATGRCGADKPVVALQYQGLVDAVR
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mRNA from alignment at Ecto-sp13_S_contig13623:422..4565+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig13623.2862.1 ID=mRNA_Ecto-sp13_S_contig13623.2862.1|Name=mRNA_Ecto-sp13_S_contig13623.2862.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4144bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13623:422..4565+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGATGGAGAGCGGAACTATGGCCGGAGCGTCTTCCGACTTCAACGAAGA CTGGGAAGACTGGGACCCGTCCCAAGGGAACTTTTTGCACCACATGGTGG CGGGCTCGATCGCGGGGATCACGGAGCATACTGTCATGTACCCGGTGGAC ACCTTCAAGACCTACGTGCAGTGCATGCGCGAGTGCCCCGAGGCCGTGGC GGGGAGGAGGGTGATGGAACTGGTGCGCGGGCAGGGCATGCTCCGGCTCT GGCGAGGGGTTGGCACAATGTTCACGGGCTGCGTGCCGGCACACGCTCTC TACTTCAGCGTCCTCGAGTATTGCAAGGTACACCAGTAGTACCGGCAGAG AGGGACGTAAAAAGCAGTTCAAGAATGATGTACATCCATCCGCCGAGCTT CTTTGGCGGCAGTAATTCGTGGCAAAGCAAAACTGACCGAAGGAAGGACC GGTCGCGTCGATTTTCTTTTGTGATACTGCTGTAGCTGCACGACACGTTA TGGTGCTGCTCTGGGTCACACGTCTACTCCGCCAGACTGCTGCGGGGTTG TTTTTTCGTATTTTTGAAAAATGACTCTACGCACATCATCAGGGGCTAAC CATACGACACCAAACGTAACCGCGCGCAAGGTCTGAATTCCAACCAAGTT CAAGAAGTTCGGTGGCACTAAGTGACACCATGCCGATAGCGTAGAGACTC CTTTGAACTCCTCATCGATGTATACGAGTTATGTGTCTCCGATAGTGTTG GGTATCGATCCAATAATAGATTCGATACGACATCGACCGCCTAGCGGTCG GTATGTTGATATCGATGTCGATTTCGATTTCGATATCGGCGAGCCGTTTT TGTTTTTTGGTTGGCGCAGCGAGCCGGCGAAGCTCCCCCCTGCGGCTGGT GAGGGGGCGCCGCTGGAGACACCGCCGGAGGCAAATCAAAGGACCAAGTT CGCCTGATTTCCCATCAAAATCACCGCAAAACAGACCTCCCGGCAGTACG CTTAATTTTCATTAGAAAAGTATCCAGTGATGCGGGTTACGGCGGTACCA GTACTTACCGATAACACCTTCCAGACGTACGTAACTAGTTCCATCCCACG TAACTTTCCCGTAACATGGGGGTTTGGGATGTATTTAAGGCAACGGGGCG ACCCCTCGCAGATTTAACACACTTGAATAGTATCCAAAACATCATTCACC GCTGCTGTAGGTGGGAGCAGTTTTGAAACTTGAACACAAGCATGTCTACC GCGCGCAGTGTACACGGATACACTTGTACGCGTATACACACGGCTCTTGT CAACCCCTGAATCCCTTATCTCTGCCTGCTGTAATCACCTATGTGTTCTA CTTCTACGGTGTTGAACACACCATACGGTGTTCAACACCCCGGGGACGAC GAGATTTCATCCCCGGTATGCTGCCGTAATTACGCGTACGGAGCACATTT TGTTGATTTCCCGTAATTACGGATACGTACCGGCCGGGAACGCCGTAACC CGCATCCCTGAAAGCATGGAGTATGTGGGTAAATTTCTACTCCGAAGAAG TACTTCATGTACAGTATAATGAAATAGGAAGGGAAGCAAGAGTTTCATCG GTTCATCATTCCAACTATTAGCACAGCGCTGTTGCTTCAATGCTCAGTGG GTATCGCACACCACGAAAAGAAACAAGCTTGTCGCAAAAGCCAAGCTCTC ACAATGAGAGATAAATTGACAGCAGAGTATGTAGCTCCCGCTACTACCCA CCTACCGCTAAATGCACGCGTTTCATGACCCCCTTTACGGCGTGCAGCTG ATGTGTGCTGTGTGCTGTGCAGCTATGGGGGTTCCGTGTGGACATCAGGG TTCCGTGGAGTTTTTATCGATTTATCGTTACCTTTTTCGAAATATATCGA AAAGGCCAAATTTTTTCGATACCCGATATCGATACGATACGTTGATAGTA CATGGCGAAAACATTGATAAATAAAAATGGGTACGATATCCAACACTAGT CTCCTTGTTCTGCGTGCTAGGACAATCATTTTGCTCTCTTTGTGAAAGCG CATCGTTCAGTTTTGTGCGCTCTCACACTCCGCGCACTTGTTTTATCTGG GCAGCAACTCTCGGCGCCAAGCAAAGGGACGTACCGCATGGTGTCAGCGA GATATTGCGTGCATCTTGATTCCTTCCCATTCTGGAAACCCACCATTTTC TGAGCACCAATTTGCACCCAGCCTGCGGGACTCACGCACCTATCAAAGAA CATCGACAATTTACAAGCACATCAACGTCTCTTCATCTCCCACCCCCCGA GACCGTACATGGTCTGGAGAGTAGTCTTTTATCAGCACACTAAAGTACCG CTGACGCAATTGAACCGCAAGTGCGACCAACAGTATGTCGAGCTATGCCT CTTGCCCACCTATACAGTAATCCAAATGATGCAGTGTTTGCTAATTGTTT ATTCGCCTGTGTGGTCTCGCAAACTTGACAGTAGGGAACACGAGCTAAAT AGGCATGTGATCCTGACAAGCATCTTCGAGTCATTTTCTTCACGACGATT TCTCCTCGGACAGAGTCAAGGACCGGTCTTTGGATCGTTGTTTTTCTCCC CCGTGAAACTCGACGGTTACGTTTGTGAAAAATGCAGCCCTGAGCGATAT GCATGCACACAGACTCGCATGTGCGAGGGAGCACGCACGGGAACGGCATT CCAGCAGACGACGTTGCACCCCAGCATCCGAGAGCATAGCAGTAGTATCC CCCCTTCAGTCGAACTCAACGTAACGCTCGCCCGACGCGTGATTGTCGAG AACTGATCATCACGGCCCACACAGAACGCGTGAGAAATGTCAAAAAGATT TTGCCGTCAATAGCACTGCAAGCAGGGCGTTTCCCTTCTCCACTTGTGTG CGACCTTCCTCCCTCTTGTGTGACTCCGGCTGATACATCATAACATTTAC ACCACGAGGTGTAAGACGAGCGCCAGAATAAATTGGACCAACACAGGCAC ACCTGTTGACGTTTATGCCCGACTTTTCGTTCGTCTCTGCACCGTCTCCG CAGGACCGCCTGGGTGTCAACCAACCCGGGCATCAGCCGGCGGGCGCAGC CGTGGCAGGGGCGGCGGCGACGGTTTTTCACGACGCGGTGATGACCCCAA TGGACGTCGTCAAGCAGCGCCTGCAGCTGGGCTACCACAAGGGGATGCTT GACTGCGTGTTGACTATCCAGCGGACGGAAGGGACGCAGGTGTGTGTGCG TGCTTGTTCATTTCTTAATTGAAATTCACATACGTGGAAGTACTAGAGTT TGGTCGCCGCCGCACTAAATATGCCTCTCTCCTGTTTTTAGCGGGGCAGA GGCTGCATGTACAGTACTTCGAACGTGGATCCAAGGATTCTGTCGGTTTC AAGTGATTAGCTGCAGAACGAAGACGTTCAAGTGGAGGCGGTGCTCGCCC ATACTCGAACTGAATTTTCTCGTCGGGCGGACCAAGGCTTGGCCCTGGTC GGTCGGCATCATCGGTTGAAGCTTGCCGCCATGTATCAGAGCACCGCTCG CTCATGTCCCGCTGTTTTGCCCCAACATTGGCACCTGAAACCTATCCATC TGCACAACCCTCGTTGCTGCGCCCCCCCCCCCCTGGGAACCAGGCGTTTT ATCGAAGTTTCCCGACGACGTTGTTCATGAACATCCCGTACGGGTGCGTC ATGGTGGCCGCGAACGAGAGCCTGAAGCGCGTCATGCGTCCCGCGGGTGA CTACGACACAAAGACCTTCCTCCTTGCCGGGAGCGGCGCCGGTGCCGTCG CTGCGGTGGCCACGACCCCCCTCGACGTCGTCAAGACGCGCTTGCAGACG CAAGCGTTCCGGGGGGCAGCAGCGCCGCTAGCAGCGCGCTCGGAAGGCTT CGCAGCGCCTAAGGAAGGAGCAGCGGTAGGGGGGAGGGGAGGGATTGTTC TGCCGCAGTTCTTGCGAGCGAGCGGGGGAGCGGGGGGAGGGGGGGGCGGC GCGGCTGGGCAGCACGGGCCGATTTGGGGGGGGGGGCAGGGGACGGGGCT GCACAGCGCGGCGGCTAGGTGTGCGACCGGACGTTGCGGCGCGGACAAGC CTGTGGTGGCACTGCAGTACCAGGGGCTGGTTGACGCGGTGAGA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig13623:422..4565+

>mRNA_Ecto-sp13_S_contig13623.2862.1 ID=mRNA_Ecto-sp13_S_contig13623.2862.1|Name=mRNA_Ecto-sp13_S_contig13623.2862.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=900bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13623:422..4565+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGATGGAGAGCGGAACTATGGCCGGAGCGTCTTCCGACTTCAACGAAGA
CTGGGAAGACTGGGACCCGTCCCAAGGGAACTTTTTGCACCACATGGTGG
CGGGCTCGATCGCGGGGATCACGGAGCATACTGTCATGTACCCGGTGGAC
ACCTTCAAGACCTACGTGCAGTGCATGCGCGAGTGCCCCGAGGCCGTGGC
GGGGAGGAGGGTGATGGAACTGGTGCGCGGGCAGGGCATGCTCCGGCTCT
GGCGAGGGGTTGGCACAATGTTCACGGGCTGCGTGCCGGCACACGCTCTC
TACTTCAGCGTCCTCGAGTATTGCAAGGACCGCCTGGGTGTCAACCAACC
CGGGCATCAGCCGGCGGGCGCAGCCGTGGCAGGGGCGGCGGCGACGGTTT
TTCACGACGCGGTGATGACCCCAATGGACGTCGTCAAGCAGCGCCTGCAG
CTGGGCTACCACAAGGGGATGCTTGACTGCGTGTTGACTATCCAGCGGAC
GGAAGGGACGCAGGCGTTTTATCGAAGTTTCCCGACGACGTTGTTCATGA
ACATCCCGTACGGGTGCGTCATGGTGGCCGCGAACGAGAGCCTGAAGCGC
GTCATGCGTCCCGCGGGTGACTACGACACAAAGACCTTCCTCCTTGCCGG
GAGCGGCGCCGGTGCCGTCGCTGCGGTGGCCACGACCCCCCTCGACGTCG
TCAAGACGCGCTTGCAGACGCAAGCGTTCCGGGGGGCAGCAGCGCCGCTA
GCAGCGCGCTCGGAAGGCTTCGCAGCGCCTAAGGAAGGAGCAGCGGGGAC
GGGGCTGCACAGCGCGGCGGCTAGGTGTGCGACCGGACGTTGCGGCGCGG
ACAAGCCTGTGGTGGCACTGCAGTACCAGGGGCTGGTTGACGCGGTGAGA
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