mRNA_Ecto-sp13_S_contig13565.2828.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig13565.2828.1 vs. uniprot
Match: D7FPZ4_ECTSI (Cryptochrome DASH n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPZ4_ECTSI) HSP 1 Score: 919 bits (2376), Expect = 0.000e+0 Identity = 449/489 (91.82%), Postives = 464/489 (94.89%), Query Frame = 1
Query: 1 MASMVATSLTTEGASDIARGDTVGVVWFKYTDLRLEDHEPLALAHRNSSNVAHVFCIDDRWFGHSRRGTRRMSAARCRFLFESVADLQTRLRSKGSDLLLQRGHPEDAIPAVVARLGSGASAVTVYAHTDLCSEENSAHAAVKSALSLVGSAGGVGGDACGASLTEVWGNTLHDPSDLPYDFPSGLPEVFTPFRKAVEPNCEIRSPTPLPSPLRPLPAGLHDNDVTPSLPVAIPTTEELGLGTAPERDARSVLPFIGGETAGLRRVKNYIWDEDRLREYKATRNGLLGSGFSSKFSPWLALGCLSPRTIVKEIRKYEQDRVANDSTYWLVFELLVRDFFRYSAVKYGNAIFHLGGSRRDPDRQAWRDDAGLLAAWKEGRTGYPFVDANMRELKASGFMSNRGRQVVASFFTKDLKMDWRLGAEHFEEYLLDYDPASNYGNWNYVAGVGFDPREDRYFSVEKQARTYDPDGDYVRHWLPELAMLATEALQ 1467
MASMVATSLT GAS IARGDT+GVVWFK TDLRLEDHEPLALAHRNSS+VAHVFCIDDRWFGHSRRGTRRMSAARCRFL ESVADLQTRLR+KGSDLL++RGHPE+AIPAV ARLGSGASAVTVYAH DLCSEEN HAAVKSALSLVGSAGGVGGDA G S+TEVWGNTLHDPSDLPYDFP+GLPEVFTPFRKAVEPNC+IRSP PLPSP RPLPAGLHDN VTP+L VAIPTTEELGLGTAPERDARSVL FIGGETAGLRRV+ YIW+ED LREYK TRNGLLG GFSSKFSPWLALGCLSPRTIVKEIRKYE DR+ANDSTYWL+FELLVRDFFRYSAVKYGNAIFHLGGSRRD DRQ WRDDAGLLAAWKEGRTGYPFVDANMRELKASGFMSNRGRQVVASFFTKDL+MDWRLGAEHFEEYLLDYDPASNYGNWNYVAGVGFDPREDRYFSVEKQARTYD DGDYVRHWLPELAML TEALQ
Sbjct: 1 MASMVATSLTAGGASGIARGDTIGVVWFKCTDLRLEDHEPLALAHRNSSHVAHVFCIDDRWFGHSRRGTRRMSAARCRFLLESVADLQTRLRAKGSDLLIRRGHPENAIPAVAARLGSGASAVTVYAHPDLCSEENDVHAAVKSALSLVGSAGGVGGDATGVSVTEVWGNTLHDPSDLPYDFPNGLPEVFTPFRKAVEPNCKIRSPVPLPSPFRPLPAGLHDNAVTPTLTVAIPTTEELGLGTAPERDARSVLHFIGGETAGLRRVQTYIWEEDHLREYKVTRNGLLGGGFSSKFSPWLALGCLSPRTIVKEIRKYETDRIANDSTYWLIFELLVRDFFRYSAVKYGNAIFHLGGSRRDSDRQTWRDDAGLLAAWKEGRTGYPFVDANMRELKASGFMSNRGRQVVASFFTKDLEMDWRLGAEHFEEYLLDYDPASNYGNWNYVAGVGFDPREDRYFSVEKQARTYDADGDYVRHWLPELAMLTTEALQ 489
BLAST of mRNA_Ecto-sp13_S_contig13565.2828.1 vs. uniprot
Match: D7FPZ3_ECTSI (Cryptochrome DASH n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPZ3_ECTSI) HSP 1 Score: 752 bits (1942), Expect = 2.050e-269 Identity = 370/492 (75.20%), Postives = 414/492 (84.15%), Query Frame = 1
Query: 1 MASMVATSLTTEGASDIARGDTVGVVWFKYTDLRLEDHEPLALAHRNSSNVAHVFCIDDRWFGHSRRGTRRMSAARCRFLFESVADLQTRLRSKGSDLLLQRGHPEDAIPAVVARLGSGASA-VTVYAHTDLCSEENSAHAAVKSALSLVGSAGGVGGDACGASLTEVWGNTLHDPSDLPYDFPSGLPEVFTPFRKAVEP--NCEIRSPTPLPSPLRPLPAGLHDNDVTPSLPVAIPTTEELGLGTAPERDARSVLPFIGGETAGLRRVKNYIWDEDRLREYKATRNGLLGSGFSSKFSPWLALGCLSPRTIVKEIRKYEQDRVANDSTYWLVFELLVRDFFRYSAVKYGNAIFHLGGSRRDPDRQAWRDDAGLLAAWKEGRTGYPFVDANMRELKASGFMSNRGRQVVASFFTKDLKMDWRLGAEHFEEYLLDYDPASNYGNWNYVAGVGFDPREDRYFSVEKQARTYDPDGDYVRHWLPELAMLATEALQ 1467
MASM++ T G S A G+VWFKY+DLRLEDHEPLALAHR S+ VAHVFCIDDRWFG +RRGT +MSAARCRFL ESVADL+ RLR +GSDLL++RGHPED IPA+ ARLG G+ A VT++AHTD+CSEE HAAVKSAL+ SAG GG A ++ E WGNTLHD +DLP+DFPSG+PE+FT FRK+VE +C++R P PLPSP RP+P G +D S P AIPTTEELGLGTAPERDARSV PF GGETAGLRRV++YIWDEDRLREYK TRNGLLGSGFSSKFSPWLALGCLSPRTIVKEIRKYE DR+ANDSTYWL+FELL RDFFRYSAVK GN+IFHLGG RRD RQ W DDAG L AWKEG TGYP +DANMRELKASGFMSNRGRQVVASFFT+DL+MDWRLGAEHFEEYLLD+DPASN+GNWNYVAGVG DPRE RYF++EKQA+TYD +G Y+RHWLPELA L T ALQ
Sbjct: 2 MASMMSAGGTAAGGSAAALKGAAGIVWFKYSDLRLEDHEPLALAHRESAQVAHVFCIDDRWFGQTRRGTSKMSAARCRFLLESVADLRARLRERGSDLLVRRGHPEDVIPALAARLGGGSVAGVTLFAHTDVCSEEADVHAAVKSALAAASSAGRGGGAA--VAVKEAWGNTLHDVADLPFDFPSGVPEIFTQFRKSVESKYSCKMRPPVPLPSPFRPVPTGTTQDDGEASAPGAIPTTEELGLGTAPERDARSVFPFNGGETAGLRRVQSYIWDEDRLREYKVTRNGLLGSGFSSKFSPWLALGCLSPRTIVKEIRKYETDRIANDSTYWLIFELLWRDFFRYSAVKNGNSIFHLGGPRRDTGRQRWLDDAGSLEAWKEGETGYPLIDANMRELKASGFMSNRGRQVVASFFTRDLQMDWRLGAEHFEEYLLDHDPASNWGNWNYVAGVGSDPREGRYFNIEKQAKTYDAEGAYMRHWLPELAALPTTALQ 491
BLAST of mRNA_Ecto-sp13_S_contig13565.2828.1 vs. uniprot
Match: W7TQV2_9STRA (Cryptochrome DASH n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TQV2_9STRA) HSP 1 Score: 464 bits (1194), Expect = 3.520e-155 Identity = 247/493 (50.10%), Postives = 311/493 (63.08%), Query Frame = 1
Query: 34 EGASDIARGDTVGVVWFKYTDLRLEDHEPLALAHRNSSNVAHVFCIDDRWFGH----SRRGTRRMSAARCRFLFESVADLQTRLRSKGSDLLLQRGHPEDAIPAVVARLGSGASAVTVYAHTDLCSEENSAHAAVKSALSLVGSAGGVGGDACGASLTEVWGNTLHDPSDLPY-DFPSGLPEVFTPFRKAVEPNCEIRSPTPLPSPLRPLP--AGLHDND---VTPSLPVAIPTTEELGLGTA------PERDARSVLPFIGGETAGLRRVKNYIWDEDRLREYKATRNGLLGSGFSSKFSPWLALGCLSPRTIVKEIRKYEQDRVANDSTYWLVFELLVRDFFRYSAVKYGNAIFHLGGSRRDPDRQAWRDDAGLLAAWKEGRTGYPFVDANMRELKASGFMSNRGRQVVASFFTKDLKMDWRLGAEHFEEYLLDYDPASNYGNWNYVAGVGFDPREDRYFSVEKQARTYDPDGDYVRHWLPELAMLATEAL 1464
EG S G+VW+K TDLR DHEPL+LAH +S+VAH+FC D RWFG S GT + R RFL E+V DL+TRL G +++++ G PE +P RL VYAH ++ SEE + VK LS + E+WGN L+ D+P+ + +P +FT FRKAVE +R P P L+P P + + +N ++P A+ T E LG D SVL F GGETAGL R++ Y WD+D L++YK TRNG+LG +SSKFSPWLA G +SPR I EIRKYE++RV NDSTYWL FEL+ RDFFR+SA+ +GNA F LGG + +P + W+ D L AWKEG TGYP VDANMRELK +GFMSNRGRQ+VASF T+D+ ++WRLGA FEE LLDYDP SNYGNW Y AGVG DPREDRYFS+ KQ TYDP+ Y++HW PEL + + L
Sbjct: 75 EGTSSDTSVKKCGLVWYKCTDLRTLDHEPLSLAHAENSHVAHLFCFDPRWFGDAGGPSAPGTLKTGPLRARFLLEAVEDLKTRL---GGNMIVKLGKPETEVP----RLAKALKVDFVYAHREVTSEEVAVVKGVKEGLSKATEGK--------SQFRELWGNYLYHIDDVPFQNLKQDMPSIFTQFRKAVESKARVRKYLPKPPSLKPAPPRSTVEENTNALLSPLTLEALGFTREEDLGPVLSYASDTRVDPSSVLMFKGGETAGLARLQEYFWDKDLLQKYKETRNGMLGPDYSSKFSPWLATGSISPRVIFAEIRKYERERVENDSTYWLFFELIWRDFFRFSAISFGNAFFKLGGPQGNPRKYPWKRDGALYHAWKEGLTGYPLVDANMRELKTTGFMSNRGRQLVASFLTRDMGLEWRLGAYWFEEVLLDYDPCSNYGNWCYAAGVGSDPREDRYFSLPKQGATYDPEARYIKHWCPELRHIPADIL 552
BLAST of mRNA_Ecto-sp13_S_contig13565.2828.1 vs. uniprot
Match: A9U403_PHYPA (Cryptochrome DASH n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A9U403_PHYPA) HSP 1 Score: 460 bits (1183), Expect = 1.670e-154 Identity = 233/463 (50.32%), Postives = 314/463 (67.82%), Query Frame = 1
Query: 55 RGDTVGVVWFKYTDLRLEDHEPLALAHRNSSNVAHVFCIDDRWFGHSRR-GTRRMSAARCRFLFESVADLQTRLRSKGSDLLLQRGHPEDAIPAVVARLGSGASAVTVYAHTDLCSEENSAHAAVKSALSLVGSAGGVGGDACGASLTEVWGNTLHDPSDLPYDFPSGLPEVFTPFRKAVEPNCEIRSPTPLPSPLRPLPAGLHDNDVTPSLPVAIPTTEELGLGTAPERDARSVLPFIGGETAGLRRVKNYIWDEDRLREYKATRNGLLGSGFSSKFSPWLALGCLSPRTIVKEIRKYEQDRVANDSTYWLVFELLVRDFFRYSAVKYGNAIFHLGGSRRDPDRQAWRDDAGLLAAWKEGRTGYPFVDANMRELKASGFMSNRGRQVVASFFTKDLKMDWRLGAEHFEEYLLDYDPASNYGNWNYVAGVGFDPREDRYFSVEKQARTYDPDGDYVRHWLPEL 1440
+G + +VWF+ DLR+ D+E L A ++S V ++ +D R +G + G + R +F+ ESVA+L+ LR +G DL++++G PED +P++ +G A TVYAH + CSEE + VK L+ + GG L VWG TL+ DLP+ PS LP+V+T FRK VE NC++R +P+ + PLP L + IPT ELGL E+ V+ F GGETA L R+++Y W++D+L+ YK TRNG+LG+ +S+KFSPWLA GCLSPRTI E+++YE +RVANDSTYW++FEL+ RD+FR+ ++KYGNAIFHLGG R+ ++ W + L AW+EGRTGYP +DANM+EL A+GFMSNRGRQ+V SF +DL +DWR+G E FE LLDYDP SNYGNW Y AGVG DPREDRYFS+ KQ+ TYDP+G+YV HWLP L
Sbjct: 61 KGTGIAIVWFR-NDLRISDNEALLKAWQSSQAVVPLYVVDPRLYGQTYHFGFPKTGELRAQFIMESVANLRDNLRQRGLDLIVRQGKPEDVVPSIAKSIG----AHTVYAHKETCSEETTVETGVKRGLANL-----EGGPKMQIRLDFVWGGTLYHLDDLPFS-PSELPDVYTQFRKGVEYNCKVRPALKMPTQMGPLPESLSEKIGELG---DIPTMAELGLKYR-EQSPLGVMHFEGGETAALARLQDYFWNKDQLKIYKETRNGMLGANYSTKFSPWLAHGCLSPRTIHDEVKRYETERVANDSTYWVLFELIWRDYFRFVSIKYGNAIFHLGGPRKVVGKR-WSQNRELFEAWREGRTGYPLIDANMKELAATGFMSNRGRQIVCSFLVRDLGLDWRMGGEWFETCLLDYDPCSNYGNWTYGAGVGNDPREDRYFSIPKQSATYDPEGEYVAHWLPSL 507
BLAST of mRNA_Ecto-sp13_S_contig13565.2828.1 vs. uniprot
Match: A0A4D9D1W9_9STRA (Cryptochrome DASH n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D1W9_9STRA) HSP 1 Score: 466 bits (1200), Expect = 2.050e-154 Identity = 248/494 (50.20%), Postives = 311/494 (62.96%), Query Frame = 1
Query: 34 EGASDIARGDTVGVVWFKYTDLRLEDHEPLALAHRNSSNVAHVFCIDDRWFGH----SRRGTRRMSAARCRFLFESVADLQTRLRSKGSDLLLQRGHPEDAIPAVVARLGSGASAVTVYAHTDLCSEENSAHAAVKSALSLVGSAGGVGGDACGASLTEVWGNTLHDPSDLPYD-FPSGLPEVFTPFRKAVEPNCEIRSPTPLPSPLRPLPAGLHDNDVTPSLPVAIPTTEELG----------LGTAPER--DARSVLPFIGGETAGLRRVKNYIWDEDRLREYKATRNGLLGSGFSSKFSPWLALGCLSPRTIVKEIRKYEQDRVANDSTYWLVFELLVRDFFRYSAVKYGNAIFHLGGSRRDPDRQAWRDDAGLLAAWKEGRTGYPFVDANMRELKASGFMSNRGRQVVASFFTKDLKMDWRLGAEHFEEYLLDYDPASNYGNWNYVAGVGFDPREDRYFSVEKQARTYDPDGDYVRHWLPELAMLATEAL 1464
EG S G+VW+K TDLR DHEPL+LAH +S+VAH+FC D RWFG S GT + R RFL E+V DL+ RL G +++++ G PE +P RL TVYAH ++ SEE + VK LS + E+WG+ L+ D+P+ +P VFT FRKAVE +R P P ++P P D + T +LP + T E LG L A + D SVL F GGETAGL R++ Y WD+D L++YK TRNG+LG +SSKFSPWLA G +SPR I EIRKYE++RV NDSTYWL FEL+ RDFFR+SA+ +GNA F LGG + +P + W+ D L +WKEG TGYP VDANMRELK +GFMSNRGRQ+VASF T+D+ ++WRLGA FEE LLDYDP SNYGNW Y AGVG DPREDRYFS+ KQ TYDP+ Y++HW PEL + + L
Sbjct: 5 EGTSSDTSVKKCGLVWYKCTDLRTLDHEPLSLAHAENSHVAHLFCFDPRWFGDAGGPSAPGTLKTGPLRARFLLEAVEDLKIRL---GGNIIVKLGKPETEVP----RLAKALKVDTVYAHREVTSEEVAVVKGVKEGLSKATEGK--------SQFRELWGSYLYHIDDVPFQSLKQDMPSVFTQFRKAVESKARVRKYLPKPPSMKPAPPRSTDEENTNALPSPL-TLEALGFTREEDLGPVLNYASDTRVDPSSVLMFKGGETAGLARLQEYFWDKDLLQKYKETRNGMLGPDYSSKFSPWLATGSISPRVISAEIRKYERERVENDSTYWLFFELIWRDFFRFSAISFGNAFFKLGGPQGNPRKYPWKRDGALYHSWKEGLTGYPLVDANMRELKTTGFMSNRGRQIVASFLTRDMGLEWRLGAYWFEEVLLDYDPCSNYGNWCYAAGVGSDPREDRYFSLPKQGATYDPEARYIKHWCPELRHIPADIL 482
BLAST of mRNA_Ecto-sp13_S_contig13565.2828.1 vs. uniprot
Match: UPI001F5CC7A5 (cryptochrome DASH, chloroplastic/mitochondrial-like n=2 Tax=Lolium rigidum TaxID=89674 RepID=UPI001F5CC7A5) HSP 1 Score: 444 bits (1142), Expect = 5.370e-148 Identity = 242/475 (50.95%), Postives = 311/475 (65.47%), Query Frame = 1
Query: 58 GDTVGVVWFKYTDLRLEDHEPLALAHRNSSNVAHVFCIDDRWFGHS--RRGTRRMSAARCRFLFESVADLQTRLRSKGSDLLLQRGHPEDAIPAVVARLGSGASAVTVYAHTDLCSEENSAHAAVKSALSLVGSAG-GVGGDA---CGASLTEVWGNTLHDPSDLPYDFPSGLPEVFTPFRKAVEPNCEIRSPTPLPSPLRPLPA-GLHDNDVTPSLPVAIPTTEELGLG-TAPERDARSVLPFIGGETAGLRRVKNYIWDEDRLREYKATRNGLLGSGFSSKFSPWLALGCLSPRTIVKEIRKYEQDRVANDSTYWLVFELLVRDFFRYSAVKYGNAIFHLGGSRRDPDRQAWRDDAGLLAAWKEGRTGYPFVDANMRELKASGFMSNRGRQVVASFFTKDLKMDWRLGAEHFEEYLLDYDPASNYGNWNYVAGVGFDPREDRYFSVEKQARTYDPDGDYVRHWLPELAMLATE 1458
G V VVWF+ DLR+ D+E LA A S V V+C+D R G + R G + A R +FL E + DL+ L+ +G DLL++ G PED +P++V + SA TVYAH + CSEE V+ L V G D L +WG T++ DLP+ S LP+V+T FRKAVE +RS + LP P P+ GL + S +PT E LGLG T PE+ + FIGGE+A L RV Y W D+L+ YK TRNG+LG +S+KFSPWLA G LSPR + +E+++YE+ RVANDSTYW++FEL+ RD+FR+ + KYGN+IFHLGG R+ + W D L +W++GRTGYP +DANM+EL A+GFMSNRGRQ+V SF +D+ +DWR+GAE FE LLDYDPASNYGNW Y AGVG DPREDRYFS+ KQA+TYDPDG+YV +WLPEL LA E
Sbjct: 79 GSGVAVVWFR-NDLRVLDNEALARAWAASEAVLPVYCVDPRVLGGATHRFGFPKTGALRAQFLIECLGDLKRNLQKRGLDLLIRHGKPEDVLPSIVKTV----SAHTVYAHKETCSEELLVERLVRRGLDQVAIPQVGTSSDQNKPLNPKLQLIWGATMYHIDDLPFPV-SNLPDVYTQFRKAVESKSSVRSCSKLPPSFGPAPSSGLGEIGGWGS----VPTLESLGLGVTKPEKG----MHFIGGESAALGRVHEYFWKNDQLKVYKETRNGMLGPDYSTKFSPWLASGSLSPRYVCEEVKRYEKQRVANDSTYWVLFELMWRDYFRFLSEKYGNSIFHLGGPRKVVSK--WSQDQTLFESWRDGRTGYPLIDANMKELLATGFMSNRGRQIVCSFLVRDMGIDWRMGAEWFETCLLDYDPASNYGNWTYGAGVGNDPREDRYFSIPKQAKTYDPDGEYVAYWLPELRSLARE 537
BLAST of mRNA_Ecto-sp13_S_contig13565.2828.1 vs. uniprot
Match: A0A3B6RMA4_WHEAT (Cryptochrome DASH n=25 Tax=Triticeae TaxID=147389 RepID=A0A3B6RMA4_WHEAT) HSP 1 Score: 444 bits (1141), Expect = 1.140e-147 Identity = 244/475 (51.37%), Postives = 311/475 (65.47%), Query Frame = 1
Query: 67 VGVVWFKYTDLRLEDHEPLALAHRNSSNVAHVFCIDDRWFGHS--RRGTRRMSAARCRFLFESVADLQTRLRSKGSDLLLQRGHPEDAIPAVVARLGSGASAVTVYAHTDLCSEENSAHAAVKSALSLVGSAGGVGGDACGAS-------LTEVWGNTLHDPSDLPYDFPSGLPEVFTPFRKAVEPNCEIRSPTPLPSPLRPLP-AGLHDNDVTPSLPVAIPTTEELGLG-TAPERDARSVLPFIGGETAGLRRVKNYIWDEDRLREYKATRNGLLGSGFSSKFSPWLALGCLSPRTIVKEIRKYEQDRVANDSTYWLVFELLVRDFFRYSAVKYGNAIFHLGGSRRDPDRQAWRDDAGLLAAWKEGRTGYPFVDANMRELKASGFMSNRGRQVVASFFTKDLKMDWRLGAEHFEEYLLDYDPASNYGNWNYVAGVGFDPREDRYFSVEKQARTYDPDGDYVRHWLPELAMLATE 1458
V VVWF+ +DLR+ D+E LA A S V V+C+D R + R G + A R +FL E + DL+ L+ +G DLL++ G PED +PA+ + SA TVYAH + CSEE V+ L V G GG A G S L VWG T++ DLP+ S LP+V+T FRKAVE +RS LP L P P +GL + S IPT E LGL T E+ R F+GGE+A L RV Y W D+++ YK TRNG+LG +S+KFSPWLA G LSPR + +E+++YE+ R+ANDSTYW++FEL+ RD+FR+ + KYGN+IFHLGG R+ + W D L +WK+GRTGYP +DANM+EL A+GFMSNRGRQ+V SF +D+ +DWR+GAE FE LLDYDPASNYGNW Y AGVG DPREDRYFS+ KQA+TYDPDG+YV +WLPEL LA E
Sbjct: 93 VAVVWFR-SDLRVLDNEALARAWAASGAVLPVYCVDPRVLAGATHRFGFPKTGALRAQFLIECLGDLKQNLQKRGLDLLVRHGKPEDILPAIAKAV----SAHTVYAHKETCSEELLVERLVRRGLEQVAVPQGQGG-ASGRSNKPLSPKLQLVWGATMYHIDDLPFPV-SDLPDVYTQFRKAVESKSSVRSCGKLPPSLGPAPGSGLDEIGGWGS----IPTLESLGLSVTKSEKGMR----FVGGESAALGRVHEYFWKNDQVKVYKETRNGMLGPDYSTKFSPWLASGSLSPRYVCEEVKRYEKQRIANDSTYWVLFELIWRDYFRFLSAKYGNSIFHLGGPRKVASK--WSQDQALFESWKDGRTGYPLIDANMKELLATGFMSNRGRQIVCSFLVRDMGIDWRMGAEWFETCLLDYDPASNYGNWTYGAGVGNDPREDRYFSIPKQAKTYDPDGEYVAYWLPELRSLAKE 550
BLAST of mRNA_Ecto-sp13_S_contig13565.2828.1 vs. uniprot
Match: UPI0019E7A52F (DASH family cryptochrome n=1 Tax=filamentous cyanobacterium LEGE 07170 TaxID=1828880 RepID=UPI0019E7A52F) HSP 1 Score: 440 bits (1131), Expect = 1.290e-147 Identity = 234/459 (50.98%), Postives = 299/459 (65.14%), Query Frame = 1
Query: 73 VVWFKYTDLRLEDHEPLALAHRNSSNVAHVFCIDDRWFGHSRRGTRRMSAARCRFLFESVADLQTRLRSKGSDLLLQRGHPEDAIPAVVARLGSGASAVTVYAHTDLCSEENSAHAAVKSALSLVGSAGGVGGDACGASLTEVWGNTLHDPSDLPYDFPSGLPEVFTPFRKAVEPNCEIRSPTPLPSPLRPLPAGLHDNDVTPSLPVAIPTTEELGLGTAPERDARSVLPFIGGETAGLRRVKNYIWDEDRLREYKATRNGLLGSGFSSKFSPWLALGCLSPRTIVKEIRKYEQDRVANDSTYWLVFELLVRDFFRYSAVKYGNAIFHLGGSRRDPDRQAWRDDAGLLAAWKEGRTGYPFVDANMRELKASGFMSNRGRQVVASFFTKDLKMDWRLGAEHFEEYLLDYDPASNYGNWNYVAGVGFDPREDRYFSVEKQARTYDPDGDYVRHWLPELAML 1449
++WF+ DLRL DHEPL A +SN+ ++C D R FG + G + A R +FL ESV DL+ LR +GSDL++++G PE I +V G A V+ HT+ +EE + A+ L+ +G+ L WG+TLH P DLP++ S LPEVFT FRK VE + I LP P LP L P A+PT E+LGL APE D RSVL F GGETAG R+++YIW DRLR YK TRNG++G+ +SSKFSPWLALGCLSPR I ++++ YE R++NDSTYWL+FELL RD+FR+ K+G+ +F G + P W+ D W+EG+TG+P VDANMREL ASGFMSNRGRQ VASF TK+L +DWR+GAE FE L+DYD SNYGNWNY AGVG D R R+F++ KQ++ YDP G YV+HWLPEL L
Sbjct: 5 LIWFR-NDLRLHDHEPLCRAIAQTSNILPLYCFDPRQFGETAFGFPKTGAFRAQFLRESVVDLRDNLRQRGSDLIIRQGKPEAVIFELVQIYGVEA----VFYHTEPMAEEQAVERAIARNLAPLGT-----------KLRGFWGHTLHHPDDLPFEI-SALPEVFTKFRKKVERDPAINPTLSLPKPPAALPPDLE--------PGALPTLEDLGL-EAPEVDERSVLRFTGGETAGKARLQDYIWQGDRLRVYKETRNGMVGADYSSKFSPWLALGCLSPRYIYEQVQDYEDQRISNDSTYWLIFELLWRDYFRFICAKHGSKVFQPEGLQGVP--LPWKQDWERFDLWREGKTGFPLVDANMRELAASGFMSNRGRQNVASFLTKNLGIDWRMGAEWFESLLVDYDVCSNYGNWNYTAGVGNDARGFRFFNILKQSKDYDPQGTYVKHWLPELVAL 435
BLAST of mRNA_Ecto-sp13_S_contig13565.2828.1 vs. uniprot
Match: A0A1U8B833_NELNU (Cryptochrome DASH n=1 Tax=Nelumbo nucifera TaxID=4432 RepID=A0A1U8B833_NELNU) HSP 1 Score: 442 bits (1138), Expect = 2.150e-147 Identity = 234/469 (49.89%), Postives = 305/469 (65.03%), Query Frame = 1
Query: 58 GDTVGVVWFKYTDLRLEDHEPLALAHRNSSNVAHVFCIDDRWFGHSRR-GTRRMSAARCRFLFESVADLQTRLRSKGSDLLLQRGHPEDAIPAVVARLGSGASAVTVYAHTDLCSEENSAHAAVKSALSLVGSAGGVGG-DACGASLTEVWGNTLHDPSDLPYDFPSGLPEVFTPFRKAVEPNCEIRSPTPLPSPLRPLPAGLHDNDVTPSLPVAIPTTEELGLGTAPERDARSVLPFIGGETAGLRRVKNYIWDEDRLREYKATRNGLLGSGFSSKFSPWLALGCLSPRTIVKEIRKYEQDRVANDSTYWLVFELLVRDFFRYSAVKYGNAIFHLGGSRRDPDRQAWRDDAGLLAAWKEGRTGYPFVDANMRELKASGFMSNRGRQVVASFFTKDLKMDWRLGAEHFEEYLLDYDPASNYGNWNYVAGVGFDPREDRYFSVEKQARTYDPDGDYVRHWLPELAMLATE 1458
G V +VWF+ DLR+ D+E L A +S V V+C+D R FG + G + A R +FL E +ADL+ L G +LL+Q G PED +P+V G A TVYAH + CSEE + V L + G G +A L +WG+T++ SDLP++ P LP+V+T FRK+VE IR LP+ L PLP+G D +IP+ ELGL + FIGGE+A + RV Y W +D LR YK RNG+LG +S+KFSPWLA GCLSPR + +E++++E++R AN+STYW++FEL+ RD+FR+ ++KYGN+IFHLGG R + W D L AWKEGRTGYP +DANM+EL +GFMSNRGRQ+V SF +D+ +DWR+GAE FE YLLDYDP SNYGNW Y AGVG DPREDRYFS+ KQA+TYDP+G+YV WLPEL L +
Sbjct: 85 GSGVSIVWFR-NDLRILDNEALYRAWASSEAVLPVYCVDPRLFGTTHYFGFPKTGAFRAQFLIECLADLKKNLMKHGLNLLIQHGKPEDILPSVAKAFG----AHTVYAHKETCSEELNVERLVSKGLQRMELPGVSGNQNAKNPKLQLIWGSTMYHISDLPFN-PDSLPDVYTQFRKSVESKSTIRGCYKLPTMLGPLPSGSLDEFGGWG---SIPSIHELGLHQGKREKG---MYFIGGESAAMGRVIEYFWKKDLLRVYKEIRNGMLGPDYSTKFSPWLAFGCLSPRFVHEEVKRFEKEREANNSTYWVLFELIWRDYFRFLSIKYGNSIFHLGGPRNVASK--WSQDQNLFEAWKEGRTGYPLIDANMKELTTTGFMSNRGRQIVCSFLVRDMGIDWRMGAEWFETYLLDYDPCSNYGNWTYGAGVGNDPREDRYFSIPKQAQTYDPEGEYVAFWLPELQALRND 539
BLAST of mRNA_Ecto-sp13_S_contig13565.2828.1 vs. uniprot
Match: K3XW21_SETIT (Cryptochrome DASH n=12 Tax=Panicoideae TaxID=147369 RepID=K3XW21_SETIT) HSP 1 Score: 441 bits (1134), Expect = 8.900e-147 Identity = 241/478 (50.42%), Postives = 308/478 (64.44%), Query Frame = 1
Query: 58 GDTVGVVWFKYTDLRLEDHEPLALAHRNSSNVAHVFCIDDR-------WFGHSRRGTRRMSAARCRFLFESVADLQTRLRSKGSDLLLQRGHPEDAIPAVVARLGSGASAVTVYAHTDLCSEENSAHAAVKSALSLVG-SAGGVGGDA--CGASLTEVWGNTLHDPSDLPYDFPSGLPEVFTPFRKAVEPNCEIRSPTPLPSPLRPLP-AGLHDNDVTPSLPVAIPTTEELGLGTAPERDARSVLPFIGGETAGLRRVKNYIWDEDRLREYKATRNGLLGSGFSSKFSPWLALGCLSPRTIVKEIRKYEQDRVANDSTYWLVFELLVRDFFRYSAVKYGNAIFHLGGSRRDPDRQAWRDDAGLLAAWKEGRTGYPFVDANMRELKASGFMSNRGRQVVASFFTKDLKMDWRLGAEHFEEYLLDYDPASNYGNWNYVAGVGFDPREDRYFSVEKQARTYDPDGDYVRHWLPELAMLATE 1458
G V VVWF+ DLR+ D+E L A S V VFC+D R +FG + G A R +FL E + DL+ LR KG DLL++ G PE+ +P++ + SA TVYAH + CSEE V+ AL V + GG G L +WG TL+ DLP+ S LP+V+T FRKAVE +R+ + LP L P P +GL + AIPT E LGL + F+GGE+A L RV Y W +D+L+ YK TRNG+LG +S+KFSPWLA G LSPR I +E+++YE+ RVANDSTYW++FEL+ RD+FR+ + KYGN+IFHLGG R+ + W D L +W+EG+TGYP +DANMREL A+GFMSNRGRQ+V SF +D+ +DWR+GAE FE LLDYDPASNYGNW Y AGVG DPREDRYFS+ KQA+TYDP+G+YV +WLPEL L E
Sbjct: 81 GAGVAVVWFR-NDLRVLDNEVLVRAWAASEAVLPVFCVDPRVLEGTTHYFGFPKTG-----ALRAQFLIECLGDLKQNLRKKGLDLLVRHGKPEEILPSIAKAV----SAHTVYAHKETCSEELLVERLVRKALEQVQITQGGAPGQKKPMNPRLQLIWGATLYHIDDLPFTV-SNLPDVYTQFRKAVESKSSVRNCSKLPPSLGPPPTSGLDEIGGW----GAIPTLESLGLSVTKSEKG---MHFVGGESAALGRVHEYFWKKDQLKVYKETRNGMLGPDYSTKFSPWLASGSLSPRYICEEVKRYEKQRVANDSTYWVLFELIWRDYFRFLSAKYGNSIFHLGGPRKVASK--WSQDQALFESWREGKTGYPLIDANMRELSATGFMSNRGRQIVCSFLVRDMGIDWRMGAEWFETCLLDYDPASNYGNWTYGAGVGNDPREDRYFSIPKQAKTYDPEGEYVAYWLPELQSLTKE 538 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13565.2828.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig13565.2828.1 >prot_Ecto-sp13_S_contig13565.2828.1 ID=prot_Ecto-sp13_S_contig13565.2828.1|Name=mRNA_Ecto-sp13_S_contig13565.2828.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=489bp MASMVATSLTTEGASDIARGDTVGVVWFKYTDLRLEDHEPLALAHRNSSNback to top mRNA from alignment at Ecto-sp13_S_contig13565:143..3841+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig13565.2828.1 ID=mRNA_Ecto-sp13_S_contig13565.2828.1|Name=mRNA_Ecto-sp13_S_contig13565.2828.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3699bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13565:143..3841+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig13565:143..3841+ >mRNA_Ecto-sp13_S_contig13565.2828.1 ID=mRNA_Ecto-sp13_S_contig13565.2828.1|Name=mRNA_Ecto-sp13_S_contig13565.2828.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1467bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13565:143..3841+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |