mRNA_Ecto-sp13_S_contig13546.2815.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig13546.2815.1
Unique NamemRNA_Ecto-sp13_S_contig13546.2815.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig13546.2815.1 vs. uniprot
Match: A0A6H5KUL4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUL4_9PHAE)

HSP 1 Score: 1330 bits (3443), Expect = 0.000e+0
Identity = 824/926 (88.98%), Postives = 847/926 (91.47%), Query Frame = 1
Query:    1 YNACITALARCGRWRQALAILDHMRFTANAAEAAAXXXXXAALKTDPAAGIDGGAAMSPPAPAAVRPDVFSYSAAITACGNCGEWRRALALLRVMREQGVPPNVVSYNAAAHACVGDQRKIGDTRINGNNGVAEPRGRASEKXXXXXXXXXXXXXXGWALVLGLMEEMRAEGVAPDVFTFTTAITACGKAGQWERALDLLDEMGGGGDG---LRRRRTGVPIXXXXXXXXXXXXXXXXXXXXXXXXXXXXRMAARAGGGLVGSPVGGVSSXXXXXXXXXXXXXXXXXXXXAMAAARDLRGSSSRDXXXXXXXXXXXXXXXXXXXXXXXXVPWPAADAVSFNSAMEACAIAGRWQEGTALLPRMLEVGVRPDVCSYGGHLACLRAGGQWQSAVEVLDEMTKAAAKAGTGIGGSGEEEAAGVSPDLGCYAAVISTLGEAGRWKQALDLLRFLQRKGSSAATWGEEPAAREERTAGWDALAAEARRGGAAISSSPAAGPNLVCYNAALTACARAREGSTALDLLEEMEGRGVFDTESFNCAMLACRGNGQWHKATAILDRMVSGDAVRLGEGFGGIAGGNASGEGRWGARLRTTVPRPDAYSFASAITACGDVGRADVALELLRKMKSAGAEPNVVVYNAVIRAVSRGIKGLAFGATLERVGVTADGEEGSAAGGGYAAAGRGEGGEKGAHDSWRRAYFLLVEMREAGLTPEVKSYNTVLAVCQRAEAWEGALEVLEEMKSGTAKRPSRSGPLDRDAAAHGAAVSSWIEEPAPPPNLVSFNTAMGACGKAGRWEIALSLLEEIADSGFAXXXXXXXXXXXXXXXXXXXXXXXXXXXRGREAGVIAAAEGVGRNEEVDQHREGLGERDDGVASVDMSGFYATIEEMLRRQKRGRHRSRQGGNARYGSGDARRDGERGNNASSGGNATSRS 2769
            YNACITALARCGRWRQALAILDHMRF+ANAAEAAA      ALK DPAAG+DGGAAMSPPAPAAVRPDVFSYSAAITACGNCGEWRRALALLRVMREQGV    VSYNAAAHACVGDQRKIG+TRINGNNGVAE RGRA+E+XXXXX         GWA+VLGLMEEMRAEGVAPDVFTFTTAITACGKAGQWERALDLL+EMG        LRRRRTGVPIXXXXXXXXXXXXXXXXXXXXXXXXXXXX  AA AGGGLVGS VGG+SSXXXXXXXXXXXXX       A AA+ DLR SS RD   XXXXXXXXXXXXXXXXXXXXX       AVSFNSAMEACAIAGRW+EGTALLPRMLEVGVRPDVCSYGGHLACLRAGGQWQ AVEVLDEMTKAAAKAGTGIGG+GEEEAAGVSPDLGCYAAVISTLGEAGRWKQALDLLRFLQRKGSSAAT GEEPAAREER AGWDALAAEAR GGAAISSSPAAGPNLVCYNAALTACARAREGSTAL+LL+EMEGRGVFDTESFNCAMLACRGNGQWHKATAILDRMVSGDAVRLGEG GG AG  A+G+G WGARLRTTVPRPDAYSFASAITACGDVGRADVALELLRKMKSAGAEPNVVV+NAVIRAVSRGIKGLAFGAT ER GVTA GEEGSAAGGGY AAGRGEGGE G HDSWRRAYFLLVEMREAGLTPEVKSYNTVLAVCQRAEAWEGALEVLEEMKSGTAKRP+RSGP DRDAAAHGAAVSSWIEEPAPPPNLVSFNTAMGACGKAG+WE ALSLLEEIADSGFAXXXXXXXXXXXXXXXXXXXXXXXXXXXRGREAGVIAAA GVGR+ EV QHREG GE DDGVASVDMSGFYATIEEM+RRQKRGRH+S QGGNA YGSGD RRDGERG++ASSGGNATSRS
Sbjct:  277 YNACITALARCGRWRQALAILDHMRFSANAAEAAAAATVDTALKADPAAGVDGGAAMSPPAPAAVRPDVFSYSAAITACGNCGEWRRALALLRVMREQGV----VSYNAAAHACVGDQRKIGETRINGNNGVAEQRGRAAEEXXXXXEE-------GWAIVLGLMEEMRAEGVAPDVFTFTTAITACGKAGQWERALDLLEEMGXXXXXXXXLRRRRTGVPIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAPAGGGLVGSSVGGISSXXXXXXXXXXXXXSSDAFSWATAASPDLRASSGRDSSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVSFNSAMEACAIAGRWREGTALLPRMLEVGVRPDVCSYGGHLACLRAGGQWQRAVEVLDEMTKAAAKAGTGIGGTGEEEAAGVSPDLGCYAAVISTLGEAGRWKQALDLLRFLQRKGSSAATCGEEPAAREERAAGWDALAAEARGGGAAISSSPAAGPNLVCYNAALTACARAREGSTALELLQEMEGRGVFDTESFNCAMLACRGNGQWHKATAILDRMVSGDAVRLGEGSGGTAGSAAAGKGGWGARLRTTVPRPDAYSFASAITACGDVGRADVALELLRKMKSAGAEPNVVVFNAVIRAVSRGIKGLAFGATPERAGVTAAGEEGSAAGGGYVAAGRGEGGEDGGHDSWRRAYFLLVEMREAGLTPEVKSYNTVLAVCQRAEAWEGALEVLEEMKSGTAKRPARSGPRDRDAAAHGAAVSSWIEEPAPPPNLVSFNTAMGACGKAGQWEKALSLLEEIADSGFAXXXXXXXXXXXXXXXXXXXXXXXXXXXRGREAGVIAAAGGVGRHGEVHQHREGTGEMDDGVASVDMSGFYATIEEMVRRQKRGRHQSHQGGNAGYGSGDVRRDGERGSSASSGGNATSRS 1191          
BLAST of mRNA_Ecto-sp13_S_contig13546.2815.1 vs. uniprot
Match: D8LMP8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMP8_ECTSI)

HSP 1 Score: 1326 bits (3431), Expect = 0.000e+0
Identity = 812/926 (87.69%), Postives = 831/926 (89.74%), Query Frame = 1
Query:    1 YNACITALARCGRWRQALAILDHMRFTANAAEAAAXXXXXA---ALKTDPAAGIDGGAAMSPPAPAAVRPDVFSYSAAITACGNCGEWRRALALLRVMREQGVPPNVVSYNAAAHACVGDQRKIGDTRINGNNGVAEPRGRASEKXXXXXXXXXXXXXXGWALVLGLMEEMRAEGVAPDVFTFTTAITACGKAGQWERALDLLDEMGGGGD---GLRRRRTGVPIXXXXXXXXXXXXXXXXXXXXXXXXXXXXRMAARAGGGLVGSPVGGVSSXXXXXXXXXXXXXXXXXXXXAMAAARDLRGSSSRDXXXXXXXXXXXXXXXXXXXXXXXXVPWPAADAVSFNSAMEACAIAGRWQEGTALLPRMLEVGVRPDVCSYGGHLACLRAGGQWQSAVEVLDEMTKAAAKAGTGIGGSGEEEAAGVSPDLGCYAAVISTLGEAGRWKQALDLLRFLQRKGSSAATWGEEPAAREERTAGWDALAAEARRGGAAISSSPAAGPNLVCYNAALTACARAREGSTALDLLEEMEGRGVFDTESFNCAMLACRGNGQWHKATAILDRMVSGDAVRLGEGFGGIAGGNASGEGRWGARLRTTVPRPDAYSFASAITACGDVGRADVALELLRKMKSAGAEPNVVVYNAVIRAVSRGIKGLAFGATLERVGVTADGEEGSAAGGGYAAAGRGEGGEKGAHDSWRRAYFLLVEMREAGLTPEVKSYNTVLAVCQRAEAWEGALEVLEEMKSGTAKRPSRSGPLDRDAAAHGAAVSSWIEEPAPPPNLVSFNTAMGACGKAGRWEIALSLLEEIADSGFAXXXXXXXXXXXXXXXXXXXXXXXXXXXRGREAGVIAAAEGVGRNEEVDQHREGLGERDDGVASVDMSGFYATIEEMLRRQKRGRHRSRQGGNARYGSGDARRDGERGNNASSGGNAT 2760
            YNACITALARCGRWRQALAILDHMRFTANAAEA  XXXXX    ALK DPAAGIDGGAAMSPPAPAAVRPDVFSYSAAITACGNCGEWRRALALLRVMREQGVPPNVVSYNAAAHACVGDQRK+G+TRINGNNGVAEPRG A+E+  XXXXXXX     GWALVLGLMEEMRAEGVAPDVFTFTTAITACGKAGQWERALDLL+EMGGGGD   GLRRRRTGV IXXXXXXXXXXXXXXXXXXXXXXXXXXX RMAARAGG            XXXXXXXXXXXXXXXXX   A AAA DLRGSS RD                          WPAADAVSFNSAMEACAIAGRWQEGTALLPRMLEVGVRPDVCSYGGHLACLRAGGQWQ AVEVLDEMTKAAAKAGTGIGGSGEEEAAGVSPDLGCYAAVISTLGEAGRWKQALDLLRFLQRKGSSAATWGEEPAAREE  A WDALAAEAR GGAAISSSPAAGPNLVCYNAALTACARA+EGSTALDLLEEMEGRGVFDTESFNCAMLACRG GQWHKATAIL+RMVSGDAVRLGEG GG AGG A+GEG WGARLRTTVPRPDAYSFASAITACGDVGRADVALELLRKMKSAGAEPNVVV+NAVIRAVSRGI G AFGAT ER GVTA  EEGSAAG GYAAAGRGEGGEK   DSWRRAYFLLVEMREAGLTPEVK+YNTVLAVCQRAEAWEGALEVL EMKSGTAKRP+RSGP DRDA+AHGAAVS+WIEEPAPPP+LVSFNTAMGACGKAG+WE ALSLLEEIADSGFAXXXXXXXXXXXXXXXXXXXXXXXXXXXRGREAGVIAAA GVGR+ E+DQ RE   ERDDGVASVDMSGFYATIEEMLRRQKRGRHRSRQGG A YGSGDARRDGERG++ASSGGNAT
Sbjct:   17 YNACITALARCGRWRQALAILDHMRFTANAAEAXXXXXXXXXXXALKADPAAGIDGGAAMSPPAPAAVRPDVFSYSAAITACGNCGEWRRALALLRVMREQGVPPNVVSYNAAAHACVGDQRKLGETRINGNNGVAEPRGHAAEEEKXXXXXXXE----GWALVLGLMEEMRAEGVAPDVFTFTTAITACGKAGQWERALDLLEEMGGGGDNDDGLRRRRTGVLIXXXXXXXXXXXXXXXXXXXXXXXXXXXGRMAARAGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFLSATAAAPDLRGSSGRDSSRDTREGVGRTSAAGAPGGTGGGAAWPAADAVSFNSAMEACAIAGRWQEGTALLPRMLEVGVRPDVCSYGGHLACLRAGGQWQRAVEVLDEMTKAAAKAGTGIGGSGEEEAAGVSPDLGCYAAVISTLGEAGRWKQALDLLRFLQRKGSSAATWGEEPAAREEPAAAWDALAAEARGGGAAISSSPAAGPNLVCYNAALTACARAKEGSTALDLLEEMEGRGVFDTESFNCAMLACRGKGQWHKATAILNRMVSGDAVRLGEGSGGTAGGAAAGEGGWGARLRTTVPRPDAYSFASAITACGDVGRADVALELLRKMKSAGAEPNVVVFNAVIRAVSRGITGPAFGATPERAGVTAAWEEGSAAGDGYAAAGRGEGGEKAGRDSWRRAYFLLVEMREAGLTPEVKTYNTVLAVCQRAEAWEGALEVLAEMKSGTAKRPARSGPRDRDASAHGAAVSTWIEEPAPPPDLVSFNTAMGACGKAGQWEKALSLLEEIADSGFAXXXXXXXXXXXXXXXXXXXXXXXXXXXRGREAGVIAAAGGVGRHGEIDQDREVPVERDDGVASVDMSGFYATIEEMLRRQKRGRHRSRQGGIAGYGSGDARRDGERGSSASSGGNAT 938          
BLAST of mRNA_Ecto-sp13_S_contig13546.2815.1 vs. uniprot
Match: A0A813D0I4_POLGL (Hypothetical protein n=3 Tax=Polarella glacialis TaxID=89957 RepID=A0A813D0I4_POLGL)

HSP 1 Score: 69.7 bits (169), Expect = 1.890e-8
Identity = 58/198 (29.29%), Postives = 83/198 (41.92%), Query Frame = 1
Query: 1789 FASAITACGDVGRADVALELLRKMKSAGAEPNVVVYNAVIRAVSRGIKGLAFGATLERVGVTADGEEGSAAGGGYAAAGRGEGGEKGAHDSWRRAYFLLVEMREAGLTPEVKSYNTVLAVCQRAEAWEGALEVLEEMKSGTAKRPSRSGPLDRDAAAHGAAVSSWIEEPAPPPNLVSFNTAMGACGKAGRWEIALSLL 2382
            + S I +C    R D  L LL +M     +P +   N   RAVS    G  +   L+ +  T+DG          +     E  +      WRRA  LL E+  AG  P   ++   +  C+RA  W  ALE++    +   KR                 V S   E  P P LV+ + ++ ACG+AG+WEIAL  L
Sbjct:   34 YESVIASCHQARRWDEVLRLLGRMMELRLQPGISTLN---RAVSACEPGSRWQFALQLLSNTSDGPRPDL----VSRLSNDEQCQLSQGHEWRRALLLLEEVVRAGFRPSEITFGAAVVACERAACWTRALELMCRALASWRKRK----------------VVSPSRETGPAPPLVALSASVSACGRAGKWEIALQHL 208          
BLAST of mRNA_Ecto-sp13_S_contig13546.2815.1 vs. uniprot
Match: A0A0G4EXP3_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EXP3_VITBC)

HSP 1 Score: 69.3 bits (168), Expect = 4.050e-8
Identity = 75/232 (32.33%), Postives = 104/232 (44.83%), Query Frame = 1
Query:    1 YNACITALARCGRWRQALAILDHMRFTANAAEAAAXXXXXAALKTDPAAGIDGGAAMSPPAPAAVRPDVFSYSAAITACGNCGEWRRALALL---------------------RVMREQGVPPNVVSYNAAAHACVGDQRKIGDTRI--------NGNNGVAEPRGRASEKXXXXXXXXXXXXXXGWALVLGLMEEMRAEGVAPDVFTFTTAITACGKAGQWERALDLLDEM 609
            +NA I  LA CG W+ ALA++D  R                AL + PA        + PP P  + P++ +Y+  + A    GEW+ AL LL                     R  R + + P+ +SY     AC  + R     R+         G  GV        ++XXXXXXXXXXXXXX       L EE + EGV PD+      + AC KAG+WERA+D+L ++
Sbjct:  367 FNAYINCLAECGLWQDALALVDPSR----------------ALGSPPA--------LPPPLPP-MAPNIETYNQVLKALERSGEWKIALQLLMHQLSHVAPSLKLGEPSAAAIRDERGRVIAPDAISYTTVLKACSREGRWRAALRVFYWMRQLRRGKEGV--------DRXXXXXXXXXXXXXXEVGFAESLFEEAKREGVLPDLIMVNALLDACDKAGEWERAVDILTQL 565          
BLAST of mRNA_Ecto-sp13_S_contig13546.2815.1 vs. uniprot
Match: A0A7S1VFX1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VFX1_9STRA)

HSP 1 Score: 67.0 bits (162), Expect = 7.630e-8
Identity = 56/220 (25.45%), Postives = 96/220 (43.64%), Query Frame = 1
Query:    1 YNACITALARCGRWRQALAILDHMRFTANAAEAAAXXXXXAALKTDPAAGIDGGAAMSPPAPAAVRPDVFSYSAAITACGNCGE-WRRALALLRVMREQGVPPNVVSYNAAAHACVGDQRKIGDTRINGNNGVAEPRGRASEKXXXXXXXXXXXXXXG------------WALVLGLMEEMRAEGVAPDVFTFTTAITACGKAGQWERALDLLDEMGGGG 621
            Y A + A ++ GRW++AL + D M+                A  T P                 +RP+ ++YS AIT+CGN G             +   +  ++++YNAA  A          ++ +  N  +  +G+AS++         XX                W   L L+++++ +G+ PD F+++ AI+ CG  G+WE AL+L+D M  GG
Sbjct:   14 YAAVMDACSKSGRWKKALELFDEMK---------------KASYTHPH----------------LRPNEYTYSVAITSCGNNGAPXXXXXXXXXXXKANKMTIHLITYNAAITAL---------SKASRANARSTAKGKASQRFGSSMMKQQXXQQRLEGDFINLDHEELWKKALDLLQQIKNDGLEPDGFSYSAAISCCGSGGRWEEALELMDVMKRGG 193          
BLAST of mRNA_Ecto-sp13_S_contig13546.2815.1 vs. uniprot
Match: A0A6H5KZI4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZI4_9PHAE)

HSP 1 Score: 68.2 bits (165), Expect = 1.160e-7
Identity = 44/114 (38.60%), Postives = 56/114 (49.12%), Query Frame = 1
Query: 2071 AYFLLVEMREAGLTPEVKSYNTVLAVCQRAEAWEGALEVLEEMKS------GTAKRPSRSGPLDRDAAAHGAAVSSWIEEPAP-PPNLVSFNTAMGACGKAGRWEIALSLLEEI 2391
            A  +L  M  AG  P V SYNT L  C+ A  +  +L +L+EMK       G   R +  G  DR A             P P  P+L +FNTA+GAC +AG WE    LLEE+
Sbjct:  747 AVGILRTMEGAGFPPSVVSYNTALGACEVAGDYRLSLRLLKEMKQQQRRRRGGEDRMNGEGKEDRSAIPRRIPSQRGRTSPPPLSPDLWTFNTALGACARAGEWEAVEDLLEEM 860          
BLAST of mRNA_Ecto-sp13_S_contig13546.2815.1 vs. uniprot
Match: B5Y463_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B5Y463_PHATC)

HSP 1 Score: 66.6 bits (161), Expect = 1.330e-7
Identity = 43/139 (30.94%), Postives = 59/139 (42.45%), Query Frame = 1
Query:  208 FSYSAAITACGNCGEWRRALALLRVMREQGVPPNVVSYNAAAHACVGDQRKIGDTRINGNNGVAEPRGRASEKXXXXXXXXXXXXXXGWALVLGLMEEMRAEGVAPDVFTFTTAITACGKAGQWERALDLLDEMGGGGD 624
             + ++ I +CG  G    A+ +L  MR  G+ P+ VSY  A  AC               N       RA+                 W   L L+  M+ EG  PD  TF++AI+AC  AGQW+RAL +L      GD
Sbjct:  106 LALNSLIASCGRGGRPDMAIEVLNEMRVYGLQPDTVSYRNAVIAC---------------NQAEHEMHRAARNHREVRLAQDEVGFAWWECALSLLRRMQEEGQQPDTQTFSSAISACESAGQWQRALRVLQSTLDDGD 229          
BLAST of mRNA_Ecto-sp13_S_contig13546.2815.1 vs. uniprot
Match: A0A6H5KYW8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYW8_9PHAE)

HSP 1 Score: 65.9 bits (159), Expect = 4.910e-7
Identity = 41/116 (35.34%), Postives = 61/116 (52.59%), Query Frame = 1
Query: 2062 WRRAYFLLVEMREAGLTPEVKSYNTVLAVCQRAEAWEGALEVLEEMKSGTAKRPSRSGPLDRDAAAHGAAVSSWIEEPAPPPNLVSFNTAMGACGKAGRWEIALSLLEEIADSGFA 2409
            W+ A+ LL  M+E G+T ++ + N+ L  C  A   E  L +L EM+S +      SG  D       AA         P P++VSFN A+GAC +AG   +A+SLL+E+  +  A
Sbjct:  246 WQEAFMLLETMQERGVTTDLYTLNSALKACGSAGQVELLLALLTEMRSSSRSNDD-SGSNDNQRGDGNAATILL-----PAPDVVSFNIAIGACARAGEASLAVSLLDEMRAAAVA 355          
BLAST of mRNA_Ecto-sp13_S_contig13546.2815.1 vs. uniprot
Match: A0A813L7C9_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813L7C9_POLGL)

HSP 1 Score: 65.5 bits (158), Expect = 6.110e-7
Identity = 37/107 (34.58%), Postives = 51/107 (47.66%), Query Frame = 1
Query: 2062 WRRAYFLLVEMREAGLTPEVKSYNTVLAVCQRAEAWEGALEVLEEMKSGTAKRPSRSGPLDRDAAAHGAAVSSWIEEPAPPPNLVSFNTAMGACGKAGRWEIALSLL 2382
            WRRA  LL E+  AG  P   ++   +  C+RA  W  ALE++    +   KR                 V S   E  P P LV+ + ++ ACG+AG+WEIAL  L
Sbjct:   42 WRRALLLLEEVVRAGFRPSEITFGAAVVACERAACWTRALELMCRALASWRKRK----------------VVSPSRETGPAPPLVALSASVSACGRAGKWEIALQHL 132          
BLAST of mRNA_Ecto-sp13_S_contig13546.2815.1 vs. uniprot
Match: D8LCM4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCM4_ECTSI)

HSP 1 Score: 63.9 bits (154), Expect = 1.620e-6
Identity = 46/152 (30.26%), Postives = 67/152 (44.08%), Query Frame = 1
Query:  199 PDVFSYSAAITACGNCGEWRRALALLRVMREQG-VPPNVVSYNAAAHACVGDQRKIGDTRINGNN---GVAEPRGRASEKXXXXXXXXXXXXXXGWALVLGLMEEMRAE-----------GVAPDVFTFTTAITACGKAGQWERALDLLDEM 609
            P+  S++AAI AC N GEW++A++LL  MR       +   YN         +    D+  +GNN   G+      A+ +              G     G     +A+           G  PDV +++  ITAC +AG WERAL LLD+M
Sbjct:  444 PNRVSFNAAINACSNAGEWQQAISLLEEMRRNANAGSDAAEYNDDLALPANREH---DSAADGNNKDAGLLAAGAAAAARNSDPRELTPSEYGGGITAPEGAEGVSKADRRRXXXXGRTGGPTPDVVSYSATITACSRAGNWERALGLLDQM 592          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13546.2815.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 22
Match NameE-valueIdentityDescription
A0A6H5KUL4_9PHAE0.000e+088.98Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LMP8_ECTSI0.000e+087.69Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A813D0I4_POLGL1.890e-829.29Hypothetical protein n=3 Tax=Polarella glacialis T... [more]
A0A0G4EXP3_VITBC4.050e-832.33Uncharacterized protein n=2 Tax=Vitrella brassicaf... [more]
A0A7S1VFX1_9STRA7.630e-825.45Hypothetical protein (Fragment) n=1 Tax=Grammatoph... [more]
A0A6H5KZI4_9PHAE1.160e-738.60Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
B5Y463_PHATC1.330e-730.94Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
A0A6H5KYW8_9PHAE4.910e-735.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A813L7C9_POLGL6.110e-734.58Hypothetical protein n=1 Tax=Polarella glacialis T... [more]
D8LCM4_ECTSI1.620e-630.26Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13546contigEcto-sp13_S_contig13546:769..4666 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score1283.1
Seed ortholog evalue0.0
Seed eggNOG ortholog2880.D8LMP8
Model size3413
Hectar predicted targeting categoryother localisation
Exons3
EggNOG free text desc.endonuclease activity
EggNOG OGsKOG4197@1,KOG4197@2759
Ec32 ortholog descriptionPentatricopeptide repeat
Ec32 orthologEc-00_005210.1
Cds size2703
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462723.4471343-UTR-Ecto-sp13_S_contig13546:768..12561681462723.4471343-UTR-Ecto-sp13_S_contig13546:768..1256Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig13546 769..1256 -
1681462723.4698079-UTR-Ecto-sp13_S_contig13546:1335..14881681462723.4698079-UTR-Ecto-sp13_S_contig13546:1335..1488Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig13546 1336..1488 -
1681462723.513019-UTR-Ecto-sp13_S_contig13546:4597..46661681462723.513019-UTR-Ecto-sp13_S_contig13546:4597..4666Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig13546 4598..4666 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462723.4836526-CDS-Ecto-sp13_S_contig13546:1488..39511681462723.4836526-CDS-Ecto-sp13_S_contig13546:1488..3951Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13546 1489..3951 -
1681462723.5016305-CDS-Ecto-sp13_S_contig13546:4357..45971681462723.5016305-CDS-Ecto-sp13_S_contig13546:4357..4597Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13546 4358..4597 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13546.2815.1prot_Ecto-sp13_S_contig13546.2815.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig13546 1489..4597 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig13546.2815.1

>prot_Ecto-sp13_S_contig13546.2815.1 ID=prot_Ecto-sp13_S_contig13546.2815.1|Name=mRNA_Ecto-sp13_S_contig13546.2815.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=901bp
MRFTANAAEAAAAAGAAAALKTDPAAGIDGGAAMSPPAPAAVRPDVFSYS
AAITACGNCGEWRRALALLRVMREQGVPPNVVSYNAAAHACVGDQRKIGD
TRINGNNGVAEPRGRASEKEEEEEEEEEEEEEEGWALVLGLMEEMRAEGV
APDVFTFTTAITACGKAGQWERALDLLDEMGGGGDGLRRRRTGVPIAPDV
ASINAAISACARAGQWESALGLLGRMAARAGGGLVGSPVGGVSSDDDDDA
EQGDAAASSAAFSSAMAAARDLRGSSSRDSSRDASKGVGRAAAAGAAGGT
GGGVPWPAADAVSFNSAMEACAIAGRWQEGTALLPRMLEVGVRPDVCSYG
GHLACLRAGGQWQSAVEVLDEMTKAAAKAGTGIGGSGEEEAAGVSPDLGC
YAAVISTLGEAGRWKQALDLLRFLQRKGSSAATWGEEPAAREERTAGWDA
LAAEARRGGAAISSSPAAGPNLVCYNAALTACARAREGSTALDLLEEMEG
RGVFDTESFNCAMLACRGNGQWHKATAILDRMVSGDAVRLGEGFGGIAGG
NASGEGRWGARLRTTVPRPDAYSFASAITACGDVGRADVALELLRKMKSA
GAEPNVVVYNAVIRAVSRGIKGLAFGATLERVGVTADGEEGSAAGGGYAA
AGRGEGGEKGAHDSWRRAYFLLVEMREAGLTPEVKSYNTVLAVCQRAEAW
EGALEVLEEMKSGTAKRPSRSGPLDRDAAAHGAAVSSWIEEPAPPPNLVS
FNTAMGACGKAGRWEIALSLLEEIADSGFAPNAISYNTAAAACARAEEWD
RAQEIVERGREAGVIAAAEGVGRNEEVDQHREGLGERDDGVASVDMSGFY
ATIEEMLRRQKRGRHRSRQGGNARYGSGDARRDGERGNNASSGGNATSRS
*
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mRNA from alignment at Ecto-sp13_S_contig13546:769..4666-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig13546.2815.1 ID=mRNA_Ecto-sp13_S_contig13546.2815.1|Name=mRNA_Ecto-sp13_S_contig13546.2815.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3898bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13546:769..4666- (Ectocarpus species13 EcNAP12_S_4_19m)
TACAACGCGTGCATCACGGCGCTAGCACGGTGCGGTCGCTGGAGACAAGC ACTTGCCATTCTCGACCACATGCGCTTTACTGCTAACGCTGCCGAGGCGG CGGCCGCCGCCGGCGCCGCTGCCGCTCTCAAAACGGACCCAGCGGCCGGC ATCGACGGCGGTGCGGCTATGTCGCCGCCGGCCCCGGCTGCCGTGCGGCC CGACGTCTTTAGTTATAGCGCGGCGATCACGGCTTGCGGCAACTGCGGTG AATGGCGGCGGGCGCTGGCGCTCCTGCGCGTCATGCGAGAGCAAGGGGTG CCTCCGAACGTGAGAGACGTTGGCGAATCGACGCTGCATGCTGGGGCAAC CCATCATGCAGGTTCTGAGTTTATGTTGTGGAGTATCCATTTCTATTGCA ATCAGCCCAAGCGTGGTGTGCTTACTTTTAACTGTATAGAGGTGTGGCCT CGGGAGGTATTTCGCACCAACACAGTGAGCCGATGCACTACTGCTGTGGC GAATGTTACTGACAAATATGCTCGACATGCGCGTGATGGATTGCAGTGCC ATTTAGTCGCCCTGTGCCCTATGCAATGTCGGCATCGAATTCCGGTCCCT GTGAAGGAAGAAGTCTCGTTTTCCTCAAGCCATTCTGGCCTAGCCCCGCG CCCCGTTCACACCATGCTTACACACCGTTGTCGCTGCGCTGCATGAATCT TTGCTTGTTTTGCAGGTCGTGAGCTACAACGCCGCCGCCCACGCGTGCGT CGGCGATCAAAGAAAAATTGGAGATACCCGCATAAACGGCAACAATGGTG TCGCCGAGCCACGAGGACGGGCTTCCGAGAAGGAGGAGGAGGAGGAGGAG GAGGAGGAGGAGGAGGAGGAGGAAGGCTGGGCGCTCGTCCTAGGGCTGAT GGAGGAGATGCGCGCGGAGGGCGTCGCCCCGGACGTCTTCACCTTCACCA CCGCCATCACGGCCTGCGGAAAGGCGGGCCAATGGGAGCGGGCGCTGGAC CTTCTTGACGAAATGGGTGGCGGCGGCGACGGGCTCCGGCGGCGGCGCAC CGGCGTCCCGATCGCCCCCGACGTGGCTTCGATCAACGCGGCGATCTCGG CGTGCGCTCGCGCGGGCCAGTGGGAGAGCGCGCTTGGTCTCTTGGGCAGG ATGGCGGCGCGGGCGGGGGGAGGGCTTGTTGGCTCCCCGGTCGGCGGAGT CAGTAGCGACGACGATGATGATGCAGAGCAGGGGGACGCGGCCGCGAGCT CTGCCGCATTCTCGTCGGCGATGGCGGCGGCACGGGACTTGAGAGGTAGC AGTAGCCGTGATAGTAGCAGGGACGCCTCGAAGGGGGTCGGAAGAGCGGC GGCGGCAGGCGCTGCCGGAGGAACGGGGGGGGGGGTTCCCTGGCCTGCCG CGGACGCGGTGAGCTTCAACTCCGCCATGGAGGCGTGCGCGATCGCCGGG CGGTGGCAGGAAGGGACCGCGCTCCTGCCCCGGATGCTGGAGGTGGGCGT ACGGCCGGACGTGTGCAGCTACGGCGGCCACCTCGCCTGCCTCCGCGCTG GTGGGCAGTGGCAGAGCGCGGTGGAGGTCTTAGACGAGATGACGAAAGCG GCGGCGAAAGCGGGCACGGGCATCGGCGGTAGCGGGGAAGAAGAAGCAGC TGGCGTTAGCCCCGACCTTGGGTGCTACGCCGCGGTCATATCCACCCTCG GCGAGGCGGGGAGGTGGAAGCAGGCGCTTGACCTTCTCCGGTTTCTGCAG AGGAAGGGGTCCTCGGCGGCGACGTGGGGCGAGGAACCAGCGGCGCGGGA GGAGCGGACGGCAGGCTGGGACGCGTTGGCGGCCGAGGCAAGACGCGGGG GCGCCGCGATCTCGTCCTCTCCCGCCGCGGGTCCGAACCTCGTGTGCTAC AACGCCGCCCTCACGGCCTGCGCGAGGGCCAGGGAGGGTTCCACCGCGCT TGACCTCCTGGAGGAGATGGAAGGGAGGGGCGTCTTCGACACCGAGAGCT TCAACTGCGCCATGCTCGCGTGCAGGGGGAACGGGCAGTGGCACAAGGCC ACCGCGATCCTGGACCGCATGGTGAGCGGCGACGCCGTGCGGCTCGGGGA GGGCTTCGGGGGCATCGCCGGGGGCAACGCCTCCGGAGAGGGCAGGTGGG GGGCGAGACTACGCACCACGGTGCCCCGGCCAGACGCGTACTCGTTCGCC TCGGCCATCACGGCGTGCGGCGACGTGGGTCGGGCAGACGTCGCGCTGGA GTTGCTGCGGAAGATGAAGTCGGCCGGTGCCGAGCCGAACGTGGTCGTCT ACAACGCGGTCATCCGCGCTGTCTCACGGGGCATAAAGGGCCTAGCATTT GGCGCTACTCTGGAACGGGTGGGCGTGACCGCTGACGGGGAGGAGGGGTC GGCGGCTGGAGGTGGGTACGCGGCGGCGGGGAGAGGTGAAGGCGGAGAGA AAGGGGCCCACGACTCGTGGAGACGAGCGTATTTTCTGTTGGTCGAGATG CGAGAGGCCGGGCTCACGCCCGAGGTGAAGAGCTACAACACCGTCCTCGC CGTCTGTCAGAGGGCGGAGGCTTGGGAAGGCGCCCTGGAGGTCCTGGAGG AGATGAAGAGCGGCACGGCCAAGAGGCCTTCGAGATCAGGCCCGCTCGAC CGAGACGCCGCCGCCCACGGCGCCGCCGTGAGCTCGTGGATAGAAGAGCC GGCCCCTCCACCCAATCTCGTGAGCTTCAACACGGCCATGGGCGCGTGCG GGAAAGCCGGCCGGTGGGAGATCGCCTTGAGCCTGCTGGAGGAGATCGCC GATTCCGGCTTCGCTCCCAACGCGATCAGCTACAACACGGCGGCGGCCGC GTGCGCTCGCGCGGAGGAGTGGGATCGCGCGCAAGAGATTGTCGAGCGCG GGCGGGAAGCGGGGGTTATTGCTGCCGCCGAAGGCGTCGGCCGAAACGAA GAGGTTGACCAACACCGGGAAGGGCTCGGGGAGAGGGACGATGGTGTTGC GTCGGTTGACATGAGCGGTTTTTACGCAACGATTGAGGAGATGCTTCGCC GGCAGAAACGCGGCAGACATCGAAGCCGCCAGGGTGGCAATGCTAGATAC GGTTCGGGGGATGCAAGGAGAGATGGCGAAAGAGGCAACAACGCCAGCAG CGGTGGCAATGCCACCAGTAGAAGCTGAGCTAGCGGGTGCGGGCTTCACC CTGTATCGAACAACAACGCATCATGACAGGTTGTAGACCAAGTGCCAGAC CTCACTTTGATCAGCATTTGGTTGACGACGTAAAGGTTTTGCTTTTCCTA GAGGGTAAACCAGCACACAACGGCTCAAGAGGTTGCTGTTTTCGGGGGTA AGTGGAAACCGTTTGGTTTGCTTTTCCTAGAGGGTAAACCAGCACACAAC GGCTCAAGAGGTTGCTGTTTTCGGGGGTAAGTGGAAACCGTTTGGTTTGG TGTAAATATTCAAGCTCTTTGATCGAGGCAAAACCTCCAGCACTTCCAAG CCCCGAAGACGGTGTGCAAGCGTTTCTCTGTGTCTTTTTCCATTTTCCCC TGGGTGTGTTGTTGCGGGTTCTTCTGTGAAATGTTATGGCCCGCATGCAA TGGTGATCGGTGCACAGAGAGTCGGGGCTGTATGCGTCCAGCACCTCCCG TTATTGGACGTTGATTCGAGTCGTCCGTTTCTCTCCATGTAGCTTGCTGA TTTATCTCTGTCTCCGTCTGCACTCTTTTGGCAGAACACACTCCACGTTC TTGGACACATCATCGGGCAACAATGAAGTAGGATTAGGCCACGCGGTTCC ACAGCAAATTTTGTGGCATGGCCGAAAAGGCAATGGTTGAGCGTTCAGTC CTTCAGTGTTGAGTTAATGTGGACATTCAGGTGCGTGCGCGTTCGAGC
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig13546:769..4666-

>mRNA_Ecto-sp13_S_contig13546.2815.1 ID=mRNA_Ecto-sp13_S_contig13546.2815.1|Name=mRNA_Ecto-sp13_S_contig13546.2815.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=2703bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13546:769..4666- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCGCTTTACTGCTAACGCTGCCGAGGCGGCGGCCGCCGCCGGCGCCGC
TGCCGCTCTCAAAACGGACCCAGCGGCCGGCATCGACGGCGGTGCGGCTA
TGTCGCCGCCGGCCCCGGCTGCCGTGCGGCCCGACGTCTTTAGTTATAGC
GCGGCGATCACGGCTTGCGGCAACTGCGGTGAATGGCGGCGGGCGCTGGC
GCTCCTGCGCGTCATGCGAGAGCAAGGGGTGCCTCCGAACGTCGTGAGCT
ACAACGCCGCCGCCCACGCGTGCGTCGGCGATCAAAGAAAAATTGGAGAT
ACCCGCATAAACGGCAACAATGGTGTCGCCGAGCCACGAGGACGGGCTTC
CGAGAAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAG
GCTGGGCGCTCGTCCTAGGGCTGATGGAGGAGATGCGCGCGGAGGGCGTC
GCCCCGGACGTCTTCACCTTCACCACCGCCATCACGGCCTGCGGAAAGGC
GGGCCAATGGGAGCGGGCGCTGGACCTTCTTGACGAAATGGGTGGCGGCG
GCGACGGGCTCCGGCGGCGGCGCACCGGCGTCCCGATCGCCCCCGACGTG
GCTTCGATCAACGCGGCGATCTCGGCGTGCGCTCGCGCGGGCCAGTGGGA
GAGCGCGCTTGGTCTCTTGGGCAGGATGGCGGCGCGGGCGGGGGGAGGGC
TTGTTGGCTCCCCGGTCGGCGGAGTCAGTAGCGACGACGATGATGATGCA
GAGCAGGGGGACGCGGCCGCGAGCTCTGCCGCATTCTCGTCGGCGATGGC
GGCGGCACGGGACTTGAGAGGTAGCAGTAGCCGTGATAGTAGCAGGGACG
CCTCGAAGGGGGTCGGAAGAGCGGCGGCGGCAGGCGCTGCCGGAGGAACG
GGGGGGGGGGTTCCCTGGCCTGCCGCGGACGCGGTGAGCTTCAACTCCGC
CATGGAGGCGTGCGCGATCGCCGGGCGGTGGCAGGAAGGGACCGCGCTCC
TGCCCCGGATGCTGGAGGTGGGCGTACGGCCGGACGTGTGCAGCTACGGC
GGCCACCTCGCCTGCCTCCGCGCTGGTGGGCAGTGGCAGAGCGCGGTGGA
GGTCTTAGACGAGATGACGAAAGCGGCGGCGAAAGCGGGCACGGGCATCG
GCGGTAGCGGGGAAGAAGAAGCAGCTGGCGTTAGCCCCGACCTTGGGTGC
TACGCCGCGGTCATATCCACCCTCGGCGAGGCGGGGAGGTGGAAGCAGGC
GCTTGACCTTCTCCGGTTTCTGCAGAGGAAGGGGTCCTCGGCGGCGACGT
GGGGCGAGGAACCAGCGGCGCGGGAGGAGCGGACGGCAGGCTGGGACGCG
TTGGCGGCCGAGGCAAGACGCGGGGGCGCCGCGATCTCGTCCTCTCCCGC
CGCGGGTCCGAACCTCGTGTGCTACAACGCCGCCCTCACGGCCTGCGCGA
GGGCCAGGGAGGGTTCCACCGCGCTTGACCTCCTGGAGGAGATGGAAGGG
AGGGGCGTCTTCGACACCGAGAGCTTCAACTGCGCCATGCTCGCGTGCAG
GGGGAACGGGCAGTGGCACAAGGCCACCGCGATCCTGGACCGCATGGTGA
GCGGCGACGCCGTGCGGCTCGGGGAGGGCTTCGGGGGCATCGCCGGGGGC
AACGCCTCCGGAGAGGGCAGGTGGGGGGCGAGACTACGCACCACGGTGCC
CCGGCCAGACGCGTACTCGTTCGCCTCGGCCATCACGGCGTGCGGCGACG
TGGGTCGGGCAGACGTCGCGCTGGAGTTGCTGCGGAAGATGAAGTCGGCC
GGTGCCGAGCCGAACGTGGTCGTCTACAACGCGGTCATCCGCGCTGTCTC
ACGGGGCATAAAGGGCCTAGCATTTGGCGCTACTCTGGAACGGGTGGGCG
TGACCGCTGACGGGGAGGAGGGGTCGGCGGCTGGAGGTGGGTACGCGGCG
GCGGGGAGAGGTGAAGGCGGAGAGAAAGGGGCCCACGACTCGTGGAGACG
AGCGTATTTTCTGTTGGTCGAGATGCGAGAGGCCGGGCTCACGCCCGAGG
TGAAGAGCTACAACACCGTCCTCGCCGTCTGTCAGAGGGCGGAGGCTTGG
GAAGGCGCCCTGGAGGTCCTGGAGGAGATGAAGAGCGGCACGGCCAAGAG
GCCTTCGAGATCAGGCCCGCTCGACCGAGACGCCGCCGCCCACGGCGCCG
CCGTGAGCTCGTGGATAGAAGAGCCGGCCCCTCCACCCAATCTCGTGAGC
TTCAACACGGCCATGGGCGCGTGCGGGAAAGCCGGCCGGTGGGAGATCGC
CTTGAGCCTGCTGGAGGAGATCGCCGATTCCGGCTTCGCTCCCAACGCGA
TCAGCTACAACACGGCGGCGGCCGCGTGCGCTCGCGCGGAGGAGTGGGAT
CGCGCGCAAGAGATTGTCGAGCGCGGGCGGGAAGCGGGGGTTATTGCTGC
CGCCGAAGGCGTCGGCCGAAACGAAGAGGTTGACCAACACCGGGAAGGGC
TCGGGGAGAGGGACGATGGTGTTGCGTCGGTTGACATGAGCGGTTTTTAC
GCAACGATTGAGGAGATGCTTCGCCGGCAGAAACGCGGCAGACATCGAAG
CCGCCAGGGTGGCAATGCTAGATACGGTTCGGGGGATGCAAGGAGAGATG
GCGAAAGAGGCAACAACGCCAGCAGCGGTGGCAATGCCACCAGTAGAAGC
TGA
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