mRNA_Ecto-sp13_S_contig13543.2813.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig13543.2813.1 vs. uniprot
Match: A0A6H5L299_9PHAE (Beta-galactosidase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L299_9PHAE) HSP 1 Score: 790 bits (2040), Expect = 2.540e-270 Identity = 437/519 (84.20%), Postives = 447/519 (86.13%), Query Frame = 1
Query: 1 QVDPSRPVVYEGGGKSLAEGCGCTDLTDVVCPMYPTVETTELLGTDGPDGVGETRPCVLCEYSHAMGNSNGNLHKYWELFRRHRRLQGGFIWDWVDQGLTRHDPITGRRYWADGGGFADGHSKARLITFSCEEALSLILYRGYDAFCVNGVTFPDRSPHPALYEAKFLAQPVGIELLRDXXXXXXXXXXXXXXXXXXTRKSGSPGSEPRVLFTNRYAFSSLDHLSLAWRLESSASAAVASGADPSSPATAGRLSLSGLMPGESREVLVGIGRDDVYFTEPPLGGRGGGRGDGREFFLHVEARLAVDTAWASEGHLVAWACFPLERASLPP---------PXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVVVPTPSHGFIAYEDEEGSAQSSREASPLGQLRQHLLTDIPAMPPSSSVIVMRGLLDPRGVVGPAEGEQHRFSQDWTLVVSKTEGNIVRFVAGGVDLIEPGAGPSLCFWRAATDNDRAGWPTLLNFVADHRLVGLLSSFMPLSRLRYAQ 1530
+VDPSRPVVYEGGGKSLAEGCGCT+LTD+VCPMYPTV TTELLGTDGPDGVGETRPC+LCEYSHAMGNS GNLHKYWELFRRHRRLQGGFIWDWVDQGLTRHDP TGRRYWADGGGFA HSKARL GYDAFCVNGVTFPDRSPHPALYEAKFLAQPVGIELLRD +KSGSP S VLFTNRYAFSSLDHLS+AWRLESSASAAVASGAD SPATA RL LSGL+PGESREV VGI R D YFTEPP GGR GG GDGREFFLHVEARLAVDTAWASEGHLVAWACFPLE ASLPP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVVVPTPSHGFIAYEDEEGSAQSSREASPLGQLRQHLLTDIPAMPPSSSVIVMRGLLDPRGVVGP GEQHRFSQDWTLVVSK +GNIVRFVAGGVDLIEPGAGPSLCFWRAATDNDRAGWPTLLNFV DHRLVGLLS FMPLSRL + +
Sbjct: 794 KVDPSRPVVYEGGGKSLAEGCGCTELTDIVCPMYPTVGTTELLGTDGPDGVGETRPCMLCEYSHAMGNSTGNLHKYWELFRRHRRLQGGFIWDWVDQGLTRHDPTTGRRYWADGGGFAGVHSKARLTL-------------GYDAFCVNGVTFPDRSPHPALYEAKFLAQPVGIELLRDDDDHHHPLGEKIRQKET-VQKSGSPASG--VLFTNRYAFSSLDHLSIAWRLESSASAAVASGADSFSPATARRLPLSGLLPGESREVSVGIDRGDGYFTEPPPGGREGGGGDGREFFLHVEARLAVDTAWASEGHLVAWACFPLEGASLPPLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVVVPTPSHGFIAYEDEEGSAQSSREASPLGQLRQHLLTDIPAMPPSSSVIVMRGLLDPRGVVGPTVGEQHRFSQDWTLVVSKIKGNIVRFVAGGVDLIEPGAGPSLCFWRAATDNDRAGWPTLLNFVVDHRLVGLLSRFMPLSRLSHLE 1296
BLAST of mRNA_Ecto-sp13_S_contig13543.2813.1 vs. uniprot
Match: A0A4D9D5D8_9STRA (Beta-galactosidase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D5D8_9STRA) HSP 1 Score: 212 bits (540), Expect = 7.420e-56 Identity = 175/545 (32.11%), Postives = 222/545 (40.73%), Query Frame = 1
Query: 4 VDPSRPVVYEGGGKSLAEGCGCTDLTDVVCPMYPTVETTELLGTDGPDGVGETRPCVLCEYSHAMGNSNGNLHKYWELFRRHRRLQGGFIWDWVDQGLTRHDPITGRRYWADGGGFADGHSKARLITFSCEEALSLILYRGYDAFCVNGVTFPDRSPHPALYEAKFLAQPVGIELLRDXXXXXXXXXXXXXXXXXXTRKSGSPGSEPRVL---FTNRYAFSSLDHLSLAWRLESSASAAVAS---------------------GAD--PSSPATAGRLSLSGLMP--------GESREVLVGIGRDDVYFTEPPLGGRGGGRGDGREF---FLHVEARLAVDTAWASEGHLVAWACFPLERASLPPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVVVPTPSHGFIAYEDEEGSAQSSREASPLGQLRQHLLTDIPAMPPSSSVIVMRGLLDPRGVVGPAEGEQHRFSQDWTLVVSKTEGNIVRFVAGGVDLIEPGAG-PSLCFWRAATDNDRAGWPTLLNFVADHRLVGLLSSFMPLSRLRY 1524
+DP+RPV YEGGG + G G T LTD+ CPMY + D RP +LCEYSHAMGNSNGNL KYW+ R QGGFIWD+VDQGL D +TGR YWA GG F D + C G+ FC+NGV FPDR+PHPAL+EAK L PV + TR++ P L NRY+F SL HL+ W L+S A A G D P SP+ R +S L GE ++ G TE + G G + ++ V A L DT WA +GH+VA F + VP P A E + + + G H A +V+V+ G +G +DW +V K G ++ + GGVDL+ P G P F RAATDNDRAG+P FV L L + P + L Y
Sbjct: 605 LDPTRPVQYEGGGADMC-GTGRTSLTDIQCPMYAVPAAAIQMAQSTRDA----RPVILCEYSHAMGNSNGNLFKYWDAVWALPRFQGGFIWDYVDQGLRHTDRLTGRSYWAYGGDFGD-------VDGPCS---------GHGQFCINGVVFPDRAPHPALHEAKHLQSPVKFHV----------------QGPSSTRRT------PMALTLGIENRYSFQSLAHLTFHWALKSDAGVLAAGTLNVEGKEVGPGQRVEVTQDVGQDGRPGSPSEPPRKLMSVLAASSPFKRSNGEKKDKRTGGNDSTTGGTEGGIPSESSGLGGTSVWSTAWVEVTALLKADTPWAPKGHVVARETFLQALVGVSEGASGDR---------------------------VPVPLLTMPALELRQERTEEGQ-----GPWTAH------AAAGEEAVLVVSGTKTSKG-------------KDWRVVFGKRSGRLLEYRVGGVDLLVPQTGGPEHAFLRAATDNDRAGYPVSATFVTPKWLCDALEPYSPWNVLSY 1055
BLAST of mRNA_Ecto-sp13_S_contig13543.2813.1 vs. uniprot
Match: A0A448Z298_9STRA (Beta-galactosidase n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z298_9STRA) HSP 1 Score: 179 bits (455), Expect = 9.750e-45 Identity = 100/229 (43.67%), Postives = 125/229 (54.59%), Query Frame = 1
Query: 4 VDPSRPVVYEGGGKSLAEGCGCTDLTDVVCPMYPTVETTELLGTDGPDGVGETRPCVLCEYSHAMGNSNGNLHKYWELFRRHRRLQGGFIWDWVDQGLTRHDPITGRRYWADGGGFADGHSKARLITFSCEEALSLILYRGYDAFCVNGVTFPDRSPHPALYEAKFLAQPVGIELLRDXXXXXXXXXXXXXXXXXXTRKSGSPGSEPRVLFTNRYAFSSLDHLSLAWRL 690
+D SRP+ YE GG S +EG G T+LTD+VCPMYP V+ L TD PD E RP +LCEYSH+M NSNGNLH YW FRR RLQGGF+WD +DQGL R GR Y+ GG F G R FC+NG+ PDR PHP++ E K+L QP+ IE+L X ++ + + R+ N Y+FS L HL W+L
Sbjct: 705 LDTSRPICYESGG-SWSEGIGRTELTDIVCPMYPNVDEVVRLATD-PD---EDRPIILCEYSHSMNNSNGNLHLYWRAFRRFERLQGGFVWDMIDQGL-RKTAKDGRSYFGYGGDFGVGQPSDR-------------------QFCINGMFSPDRDPHPSVSEIKYLQQPISIEVLGSKNTTNXTLPSSHEIKI----ENNTDATPIRLKINNLYSFSDLSHLDWEWKL 904
BLAST of mRNA_Ecto-sp13_S_contig13543.2813.1 vs. uniprot
Match: A0A7S4ADG3_9STRA (Beta-galactosidase n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4ADG3_9STRA) HSP 1 Score: 178 bits (452), Expect = 2.390e-44 Identity = 121/327 (37.00%), Postives = 152/327 (46.48%), Query Frame = 1
Query: 4 VDPSRPVVYEGGGKSLAEGCGCTDLTDVVCPMYPTVETTELLGTDGPDGVGETRPCVLCEYSHAMGNSNGNLHKYWELFRRHRRLQGGFIWDWVDQGLTRHDPITGRRYWADGGGFADGHSKARLITFSCEEALSLILYRGYDAFCVNGVTFPDRSPHPALYEAKFLAQPVGIELLRDXXXXXXXXXXXXXXXXXXTRKSGSPGSEPRVLFT--NRYAFSSLDHLSLAWRLESSASAAVASGADPSSPATAGR---LSLSGLMPGESREVLVGIGRDDVYFTEPPLGGRGGGRGDGREFFLHVEARLAVDTAWASEGHLVAWACFPL 969
+D RP+ YEGGG S +EG G T+LTD+VCPMYP V+ D E RP +LCEYSH+M NSNGNLH YW FRR RLQGGFIWD +DQGL R GR Y+ GG F G R FC+NG+ PDR PHP++ E K+L QPV I+ L G+ +L N Y+FS+L HLS W+L S S+ +P TA L+ + P + + + DD FFL +E L DT WA GH++A PL
Sbjct: 694 LDTDRPICYEGGG-SWSEGIGRTELTDIVCPMYPNVDEVVRQAIDPK----EDRPVILCEYSHSMNNSNGNLHLYWRAFRRFERLQGGFIWDMIDQGL-RKKAKDGRSYFGYGGDFGVGQPSDR-------------------QFCINGMFSPDRYPHPSVSEIKYLQQPVTIDALGSKNFDPVASSSLQEIAVAIN------GTATPILLRIKNIYSFSNLSHLSWRWKLHCSHSS------EPLMVGTATDEYDLATIDISPAVKKICSIVMEEDDFSSIL---------------FFLDIEGFLNEDTTWAMSGHVLATKQIPL 968
BLAST of mRNA_Ecto-sp13_S_contig13543.2813.1 vs. uniprot
Match: A0A7S2UIR1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UIR1_9STRA) HSP 1 Score: 166 bits (419), Expect = 1.510e-43 Identity = 97/229 (42.36%), Postives = 119/229 (51.97%), Query Frame = 1
Query: 4 VDPSRPVVYEGGGKSLAEGCGCTDLTDVVCPMYPTVETTELLGTDGPDGVGETRPCVLCEYSHAMGNSNGNLHKYWELF--RRHRRLQGGFIWDWVDQGLTRHDPITGRRYWADGGGFADGHSKARLITFSCEEALSLILYRGYDAFCVNGVTFPDRSPHPALYEAKFLAQPVGIELLRDXXXXXXXXXXXXXXXXXXTRKSGSPGSEPRVLFTNRYAFSSLDHLSLAW 684
+D +RP+VYE GG +L EG G +DLTD+ CPMYPTVE T LGT +G RP +LCEYSHAMGNSNGNL +YW+ F + RLQGGFIWD +DQGL R + TG+ Y+A G C + FC+NG+ PDR PHPA+ E K+L QPV L S + TNRY+F S D L W
Sbjct: 81 MDSTRPIVYESGG-ALFEGTGISDLTDIACPMYPTVEQTVNLGTRKDEG----RPVILCEYSHAMGNSNGNLDEYWKHFWDKDKPRLQGGFIWDMIDQGLRRVNKTTGKEYFAYG-------------DTDCGDINDR-------QFCINGLYSPDRVPHPAVAEVKYLQQPVQFTL------------------------DSETSSGVTLAVTNRYSFQSTDKLKWTW 260
BLAST of mRNA_Ecto-sp13_S_contig13543.2813.1 vs. uniprot
Match: UPI0018AB6516 (beta-galactosidase n=1 Tax=Reinekea sp. G2M2-21 TaxID=2788942 RepID=UPI0018AB6516) HSP 1 Score: 174 bits (442), Expect = 3.970e-43 Identity = 117/335 (34.93%), Postives = 152/335 (45.37%), Query Frame = 1
Query: 1 QVDPSRPVVYEGGGKSLAEGCGCTDLTDVVCPMYPTVETT------------ELLGTDGPDGVGETRPCVLCEYSHAMGNSNGNLHKYWELFRRHRRLQGGFIWDWVDQGLTRHDPITGRRYWADGGGFADGHSKARLITFSCEEALSLILYRGYDAFCVNGVTFPDRSPHPALYEAKFLAQPVGIELLRDXXXXXXXXXXXXXXXXXXTRKSGSPGSEPRVLFTNRYAFSSLDHLSLAWRLESSASAAVASGADPSSPATAGRLSLSGLMPGESREVLVGIGRDDVYFTEPPLGGRGGGRGDGREFFLHVEARLAVDTAWASEGHLVAWACFPL 969
Q DP+RPV YEGGG A +TD++CPMY V+T + LG G E RP +LCEY+HAMGNS GN HKYW+ FR + RLQGGFIWDWVDQGL D +G+ Y+A GG F D + + FC+NG+ FPDR+PHP +YEAKF Q + L PG + VL + Y F + D+ L W++ P +G L L PGE + + D+V +P GRE+ L VE W+ GH++A A F L
Sbjct: 473 QTDPTRPVQYEGGGADTA-------VTDIICPMYARVDTDLPHPAVPKWAIKKWLGLPG-----EQRPLILCEYAHAMGNSLGNFHKYWQAFRDYPRLQGGFIWDWVDQGLELQDG-SGKPYYAYGGDFGDTPNDRQ--------------------FCINGLMFPDRTPHPTVYEAKFCQQHLQFSL--------------------------QPGRQLAVLARSEYLFRNTDNEQLNWQV-----------LQDGKPILSGHQVLD-LAPGEQTRLTLA---DEVIAPKP-----------GREYHLTVEVVSRHSNTWSKAGHIMAHAQFEL 722
BLAST of mRNA_Ecto-sp13_S_contig13543.2813.1 vs. uniprot
Match: A0A1Z5J8W5_FISSO (Beta-galactosidase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J8W5_FISSO) HSP 1 Score: 174 bits (442), Expect = 4.620e-43 Identity = 120/318 (37.74%), Postives = 154/318 (48.43%), Query Frame = 1
Query: 1 QVDPSRPVVYEGGGKSLAEGCGCTDLTDVVCPMYPTVETTELLGTDGPDGVGETRPCVLCEYSHAMGNSNGNLHKYWELF--RRHRRLQGGFIWDWVDQGLTRHDPITGRRYWADGGGFADGHSKARLITFSCEEALSLILYRGYDAFCVNGVTFPDRSPHPALYEAKFLAQPVGIELLRDXXXXXXXXXXXXXXXXXXTRKSGSPGSEPRVLFTNRYAFSSLDHLSLAWRLESSASAAVASGADPSSPATAGRLSLSGLMPGESREVLVGIGRDDVYFTEPPLGGRGGGRGDGREFFLHVEARLAVDTAWASEGHLV 948
Q+DPSRPVVYE GG ++AEG G T+LTDV+C MYP + T L T PD E RP +LCEYSHAMGNSNGNLH YW F + RL+GG IWD +DQGL R D G Y+ GG F D + + FC+NG+ PDR PHPA+ E K+L QPV + R+ GS S + NRY F L HL+ +W L S+ S + P G L + +++ V+ E RG ++FL++ L D WA EGHL+
Sbjct: 612 QLDPSRPVVYESGG-AVAEGTGRTELTDVICTMYPVIPRTIKLATR-PD---EDRPVILCEYSHAMGNSNGNLHYYWNAFWDKDLPRLRGGCIWDMIDQGL-RIDDGKGGYYFGYGGDFGDEINDLQ--------------------FCINGMFSPDREPHPAVSEIKYLQQPVAFSVNRNIDVVV----------------DGSSASAV-LQARNRYTFRDLSHLAWSWNLTSNRS---------TEPIHCGFFELPSRDDDHAIVIILDAVVGKVFALEQSSPKRG------NKYFLNIRGLLTKDENWAPEGHLL 871
BLAST of mRNA_Ecto-sp13_S_contig13543.2813.1 vs. uniprot
Match: BGAL_CROS8 (Beta-galactosidase n=152 Tax=Enterobacteriaceae TaxID=543 RepID=BGAL_CROS8) HSP 1 Score: 172 bits (437), Expect = 1.820e-42 Identity = 115/328 (35.06%), Postives = 150/328 (45.73%), Query Frame = 1
Query: 7 DPSRPVVYEGGGKSLAEGCGCTDLTDVVCPMYPTVETTELLGTDGPDGV-------GETRPCVLCEYSHAMGNSNGNLHKYWELFRRHRRLQGGFIWDWVDQGLTRHDPITGRRYWADGGGFADGHSKARLITFSCEEALSLILYRGYDAFCVNGVTFPDRSPHPALYEAKFLAQPVGIELLRDXXXXXXXXXXXXXXXXXXTRKSGSPGSEPRVLFTNRYAFSSLDHLSLAWRLESSASAAVASGADPSSPATAGRLSLSGLMPGESREVLVGIGRDDVYFTEPPLGGRGGGRGDGREFFLHVEARLAVDTAWASEGHLVAWACFPL 969
DP+RPV YEGGG T TD++CPMY VET +L+ + GETRP +LCEY+HAMGNS GN YW FR++ RLQGGFIWDW DQ +TR +P G R+WA GG F D + + FC+NG+ FPDR+PHPAL+EAK Q L+ + ++ T+ Y F D+ L W +E ++ G L+L L P SR + + D F+ R E +LHV T W+ EGHL AWA +PL
Sbjct: 489 DPTRPVQYEGGGAD-------TRATDIICPMYARVETDQLIPAVPKWSIKKWISMPGETRPLILCEYAHAMGNSLGNFADYWAAFRQYPRLQGGFIWDWADQAITRVEP-DGSRWWAYGGDFGDTPNDRQ--------------------FCMNGLVFPDRTPHPALFEAKHQQQFFQFRLVSENPL--------------------------QIEVTSEYLFRESDNERLLWSIEVRGETRLS-----------GELTLE-LGPQASRVLTL----SDTGFSA---------RAGDEEIWLHVRVEQPQATPWSPEGHLSAWAQWPL 737
BLAST of mRNA_Ecto-sp13_S_contig13543.2813.1 vs. uniprot
Match: A0A2N7LBX9_9GAMM (Beta-galactosidase n=10 Tax=Enterovibrio TaxID=188143 RepID=A0A2N7LBX9_9GAMM) HSP 1 Score: 172 bits (436), Expect = 2.430e-42 Identity = 120/340 (35.29%), Postives = 156/340 (45.88%), Query Frame = 1
Query: 1 QVDPSRPVVYEGGGKSLAEGCGCTDLTDVVCPMYPTVETTELLG----TDGPDGVG---ETRPCVLCEYSHAMGNSNGNLHKYWELFRRHRRLQGGFIWDWVDQGLTRHDPITGRRYWADGGGFADGHSKARLITFSCEEALSLILYRGYDAFCVNGVTFPDRSPHPALYEAKFLAQPVGIELLRDXXXXXXXXXXXXXXXXXXTRKSGSPGSEPRVLFTNRYAFSSLDHLSLAWRLESSASAAVASGADPSSPATAGRLSLSGLMPGESREVLVGIGRDDVYFTEPPLGGRGGGRGDGREFFLHVEARLAVDTAWASEGHLVAWA--CFPLERASLPPP 993
Q DPSRPV YEGGG T TD++CPMY VE +L +G ETRP +LCEY+HAMGNS G+ KYW+ FR H RLQGGFIWDW DQGLTR D G +WA GG F D + + FC+NG+ FPDR+PHP ++EAKF Q G L+ S SP V +N Y F ++L L W L+ + G+ + G E+ + G+ D P GRE+FL+++ L+ WAS G ++ W+ P+ RA LP P
Sbjct: 479 QRDPSRPVQYEGGGAD-------TRATDIICPMYARVEEDQLQWGLPKXXXXXXIGFPEETRPLILCEYAHAMGNSLGSFDKYWKAFRSHPRLQGGFIWDWADQGLTRKDD-QGNEHWAYGGDFGDTPNDRQ--------------------FCINGLVFPDRTPHPGVFEAKFHQQYFGYHLV-----------------------STSP---LMVTLSNEYVFHPPENLVLRWSLQEN-----------------GKQIVGGE---EALYLRAGVAMDYKLLDALPHAK------PGREYFLNLDVVLSAAEPWASTGSVIGWSQLALPVSRA-LPVP 737
BLAST of mRNA_Ecto-sp13_S_contig13543.2813.1 vs. uniprot
Match: A0A7S0GT59_MICPS (Beta-galactosidase n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0GT59_MICPS) HSP 1 Score: 171 bits (434), Expect = 5.140e-42 Identity = 139/480 (28.96%), Postives = 191/480 (39.79%), Query Frame = 1
Query: 7 DPSRPVVYEGGGKSLAEGCGCTDLTDVVCPMYPTVETTELLGTDGPDGVGETRPCVLCEYSHAMGNSNGNLHKYWELFRRHRRLQGGFIWDWVDQGLTRHDPITGRRYWADGGGFADGHSKARLITFSCEEALSLILYRGYDAFCVNGVTFPDRSPHPALYEAKFLAQPVGIELLRDXXXXXXXXXXXXXXXXXXTRKSGSPGSEPRVLFTNRYAFSSLDHLSLAWRLESSASAAVASGADPSSPATAGRLSLSGLMPGESREVLVGIGRDDVYFTEPPLGG--RGGGRGDGREFFLHVEARLAVDTAWASEGHLVAWACFPLERASLPPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVVVPTPSHGFIAYEDEEGSAQSSREASPLGQLRQHLLTDIPAMPPSSSVIVMRGLLDPRGVVGPAEGEQHRFSQDWTLVVSKTEGNIVRFVAGGVDLIEPGAGPSLCFWRAATDNDRAG 1440
DP+RP+ YE GG + TD++CPMY V T E + + P+ + RP +LCEYSHAMGNSNG+L KYW FR + +QGGFIWDWVDQGL P +G+ +WA GG F D + A+ FC+NG+ FPDR+PHPA+ E KFL +PV ++ S S PR++ N F+SLDHL W + AD + G L LS + E+ D+ F + +FL + T W GH VA + +P P +GF + +L+ ++ S ++ + L D V A+G F + G IV + G ++E GPS CFWRA TDNDR G
Sbjct: 639 DPTRPLHYESGGSR-------SSCTDIICPMYARVYTCEKMANEDPN---DHRPVILCEYSHAMGNSNGSLDKYWRCFRENSAVQGGFIWDWVDQGLEATAP-SGKTFWAYGGDFGDKPNDAQ--------------------FCINGIVFPDRTPHPAMEELKFLMRPVTFQVTNLLKEEANCTRVKTDSELVNLETWIS--SNPRIVVRNWLNFTSLDHLKTTWLIL----------ADSGARLEEGVLDLSSIPQDAEVELPWKAFLPDLVFLAKKVSTLRTAAQTSPLHNWFLEFRTTVKETTRWCDAGHEVAHT-----------------------------------------QITLPVPVNGFPS---------------------PSMLSIPKSLSVHSDMVRVFTLGDDLLQVQCADGVHMAFHLSGPKI-----GTIVNMGSRGKLILE--GGPSPCFWRAPTDNDRGG 1006 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13543.2813.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig13543.2813.1 >prot_Ecto-sp13_S_contig13543.2813.1 ID=prot_Ecto-sp13_S_contig13543.2813.1|Name=mRNA_Ecto-sp13_S_contig13543.2813.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=514bp QVDPSRPVVYEGGGKSLAEGCGCTDLTDVVCPMYPTVETTELLGTDGPDGback to top mRNA from alignment at Ecto-sp13_S_contig13543:251..4520+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig13543.2813.1 ID=mRNA_Ecto-sp13_S_contig13543.2813.1|Name=mRNA_Ecto-sp13_S_contig13543.2813.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4270bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13543:251..4520+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig13543:251..4520+ >mRNA_Ecto-sp13_S_contig13543.2813.1 ID=mRNA_Ecto-sp13_S_contig13543.2813.1|Name=mRNA_Ecto-sp13_S_contig13543.2813.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1542bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13543:251..4520+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |