mRNA_Ecto-sp13_S_contig1354.2810.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1354.2810.1 vs. uniprot
Match: D8LDL2_ECTSI (2Fe-2S ferredoxin-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDL2_ECTSI) HSP 1 Score: 353 bits (907), Expect = 1.790e-116 Identity = 183/199 (91.96%), Postives = 186/199 (93.47%), Query Frame = 1
Query: 1 MAAFGPLLLRTTTSATSRALSRNAKGAARQYRERCGAAAAASEARAAAAPSVSALQHLERRRGISSSARARHGDHEEGFEHAQTVEITWENKDGLKKTTAKCGMNLMRVAHKHGIDLEGACEGVCACSTCHVIMSNEVFDQLPEASEDEEDMLDLAFGLTETSRLGCQVIVTPEMDGIVVKLPAATRNFYVDGHVPQPH 597
MAAFG LLLRTTTSATSRALSRNAKGAARQ RERCGAA APSV+ALQHLERRRGISS+ARA HGDHEEGFEHAQTV+ITWENKDGLKKTTAKCGMNLMRVAHKHGIDLEGACEGVCACSTCHVIMSNEVFDQLPEASEDEEDMLDLAFGLTETSRLGCQVIVTPEMDGIVVKLPAATRNFYVDGHVPQPH
Sbjct: 1 MAAFGALLLRTTTSATSRALSRNAKGAARQCRERCGAAXXXXXXXXXXAPSVAALQHLERRRGISSTARACHGDHEEGFEHAQTVQITWENKDGLKKTTAKCGMNLMRVAHKHGIDLEGACEGVCACSTCHVIMSNEVFDQLPEASEDEEDMLDLAFGLTETSRLGCQVIVTPEMDGIVVKLPAATRNFYVDGHVPQPH 199
BLAST of mRNA_Ecto-sp13_S_contig1354.2810.1 vs. uniprot
Match: A0A836C6V2_9STRA (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C6V2_9STRA) HSP 1 Score: 199 bits (505), Expect = 7.490e-57 Identity = 100/139 (71.94%), Postives = 111/139 (79.86%), Query Frame = 1
Query: 184 RGISSSARARHGDHEEGFEHAQTVEITWENKDGLKKTT-AKCGMNLMRVAHKHGIDLEGACEGVCACSTCHVIMSNEVFDQLPEASEDEEDMLDLAFGLTETSRLGCQVIVTPEMDGIVVKLPAATRNFYVDGHVPQPH 597
R ISS+ ARHGD E F +A V I W NK G +T A GMNLMRVAHKH I+LEGACEGVCACSTCHVI+ ++++ LPE SEDEEDMLD AFGLT TSRLGCQV+VTPEMDGI V LPAATRNFYVDGHVP+PH
Sbjct: 47 RCISSTRTARHGDESE-FANAPNVTINWRNKHGEVRTVDAPVGMNLMRVAHKHDIELEGACEGVCACSTCHVILEDDIYAALPEPSEDEEDMLDQAFGLTATSRLGCQVVVTPEMDGITVTLPAATRNFYVDGHVPKPH 184
BLAST of mRNA_Ecto-sp13_S_contig1354.2810.1 vs. uniprot
Match: A0A6U3SGD3_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3SGD3_9STRA) HSP 1 Score: 173 bits (438), Expect = 2.650e-47 Identity = 86/120 (71.67%), Postives = 100/120 (83.33%), Query Frame = 1
Query: 250 TVEITWENK---DGLKKTT-AKCGMNLMRVAHKHGIDLEGACEGVCACSTCHVIMSNEVFDQLPEASEDEEDMLDLAFGLTETSRLGCQVIVTPEMDGIVVKLPAATRNFYVDGHVPQPH 597
TV IT+ + D KT A+ G +L++ AH+H IDLEGACEGVCACSTCHVI+S++VFD LPEASEDEEDMLD+AFGL+ TSRLGCQVIVT EM+G+ V LPAATRNFYVDGHVPQPH
Sbjct: 53 TVNITFHDPKLADTPTKTVKARVGESLLQTAHRHHIDLEGACEGVCACSTCHVILSDDVFDSLPEASEDEEDMLDMAFGLSATSRLGCQVIVTDEMEGMEVNLPAATRNFYVDGHVPQPH 172
BLAST of mRNA_Ecto-sp13_S_contig1354.2810.1 vs. uniprot
Match: A0A6T5LJJ2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5LJJ2_HETAK) HSP 1 Score: 163 bits (412), Expect = 1.300e-43 Identity = 81/139 (58.27%), Postives = 101/139 (72.66%), Query Frame = 1
Query: 181 RRGISSSARARHGDHEEGFEHAQTVEITWENKDGLKKTTAKCGMNLMRVAHKHGIDLEGACEGVCACSTCHVIMSNEVFDQLPEASEDEEDMLDLAFGLTETSRLGCQVIVTPEMDGIVVKLPAATRNFYVDGHVPQPH 597
+RGISSS HG + V + +++K G++ A+ GMN+MRVAH + I+LEGACEGV ACSTCHV++ +FD+L ASE+EEDMLD A GLT TSRLGCQV VT +M+G + LPA TRNFYVDGHVPQPH
Sbjct: 31 KRGISSSFPHFHGHDDHDVATNPLVSLHFKSKKGMQTVKARVGMNVMRVAHANNIELEGACEGVIACSTCHVVLEGALFDRLAAASEEEEDMLDQAPGLTPTSRLGCQVEVTEDMEGATITLPAITRNFYVDGHVPQPH 169
BLAST of mRNA_Ecto-sp13_S_contig1354.2810.1 vs. uniprot
Match: W2JPT8_PHYPR (2Fe-2S ferredoxin-type domain-containing protein n=11 Tax=Phytophthora TaxID=4783 RepID=W2JPT8_PHYPR) HSP 1 Score: 162 bits (409), Expect = 2.400e-43 Identity = 83/139 (59.71%), Postives = 103/139 (74.10%), Query Frame = 1
Query: 184 RGISSSARARHGDHEEGFEHAQTVEITWENKD-GLKKTTAKCGMNLMRVAHKHGIDLEGACEGVCACSTCHVIMSNEVFDQLPEASEDEEDMLDLAFGLTETSRLGCQVIVTPEMDGIVVKLPAATRNFYVDGHVPQPH 597
R +SA A HGD + F + TV I ++ +D +K+ AK GM+++ VAH + IDLEGACE ACSTCHVI+ + VFD+L EA EDEEDMLD+AFGLT+TSRLGCQV VT + +G V LP ATRNFYVDGHVP+PH
Sbjct: 20 RFFHASAAALHGDMSK-FANNPTVHIKFKLRDDSIKEVEAKTGMSILDVAHANDIDLEGACESSMACSTCHVILEDPVFDELEEACEDEEDMLDMAFGLTDTSRLGCQVFVTEDFEGTTVSLPKATRNFYVDGHVPKPH 157
BLAST of mRNA_Ecto-sp13_S_contig1354.2810.1 vs. uniprot
Match: A0A1V9ZCK5_9STRA (Ferredoxin (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZCK5_9STRA) HSP 1 Score: 160 bits (406), Expect = 2.430e-43 Identity = 77/117 (65.81%), Postives = 91/117 (77.78%), Query Frame = 1
Query: 250 TVEITWENKDG-LKKTTAKCGMNLMRVAHKHGIDLEGACEGVCACSTCHVIMSNEVFDQLPEASEDEEDMLDLAFGLTETSRLGCQVIVTPEMDGIVVKLPAATRNFYVDGHVPQPH 597
TV I + KDG +K+ A G +++ VAH H IDLEGACE ACSTCHVI +VFD+LPEASE+EEDMLD+AFGLT TSRLGCQ++VT E+ V LPAATRNFYVDGHVP+PH
Sbjct: 10 TVPINFRLKDGTIKQVAASIGTSILDVAHAHDIDLEGACESSLACSTCHVIFEEDVFDELPEASEEEEDMLDMAFGLTSTSRLGCQIMVTEELANATVALPAATRNFYVDGHVPKPH 126
BLAST of mRNA_Ecto-sp13_S_contig1354.2810.1 vs. uniprot
Match: A0A1Z5K9M2_FISSO (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K9M2_FISSO) HSP 1 Score: 161 bits (407), Expect = 4.080e-43 Identity = 75/119 (63.03%), Postives = 96/119 (80.67%), Query Frame = 1
Query: 244 AQTVEITWENKDGLKKTT-AKCGMNLMRVAHKHGIDLEGACEGVCACSTCHVIMSNEVFDQLPEASEDEEDMLDLAFGLTETSRLGCQVIVTPEMDGIVVKLPAATRNFYVDGHVPQPH 597
A T+ +T+ D +K A+ G +L++ AH++ IDLEGACEGVCACSTCH+IM +++D LP+ SEDEEDMLD+AFGLT+TSRLGCQVIVT +M+G K+PAATRNFYVDGH P+PH
Sbjct: 35 APTITVTFLQPDKTRKEVQARVGESLLQTAHRNEIDLEGACEGVCACSTCHLIMPQDLYDILPDPSEDEEDMLDMAFGLTDTSRLGCQVIVTKDMEGTEFKMPAATRNFYVDGHKPKPH 153
BLAST of mRNA_Ecto-sp13_S_contig1354.2810.1 vs. uniprot
Match: A0A484EE05_BRELC (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EE05_BRELC) HSP 1 Score: 161 bits (407), Expect = 4.350e-43 Identity = 81/140 (57.86%), Postives = 102/140 (72.86%), Query Frame = 1
Query: 181 RRGISSSARARHGDHEEGFEHAQTVEITWENKD-GLKKTTAKCGMNLMRVAHKHGIDLEGACEGVCACSTCHVIMSNEVFDQLPEASEDEEDMLDLAFGLTETSRLGCQVIVTPEMDGIVVKLPAATRNFYVDGHVPQPH 597
RR +S +A HGDH + + +V I ++ +D +K+ A+ GM+++ VAH + IDLEGACE ACSTCHVI+ VFD+L EA EDEEDMLD+AFGLT TSRLGCQVIV + +G V LP ATRNFYVDGHVP+PH
Sbjct: 16 RRFFHASIKAAHGDHSKFAQCPISVHINFKLRDDSIKEVEARRGMSILDVAHANDIDLEGACESSMACSTCHVILEEPVFDKLEEACEDEEDMLDMAFGLTHTSRLGCQVIVNEDFEGATVTLPKATRNFYVDGHVPKPH 155
BLAST of mRNA_Ecto-sp13_S_contig1354.2810.1 vs. uniprot
Match: A0A3R7JZB8_9STRA (2Fe-2S ferredoxin-type domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7JZB8_9STRA) HSP 1 Score: 160 bits (405), Expect = 9.210e-43 Identity = 83/139 (59.71%), Postives = 100/139 (71.94%), Query Frame = 1
Query: 184 RGISSSARARHGDHEEGFEHAQTVEITWENKDG-LKKTTAKCGMNLMRVAHKHGIDLEGACEGVCACSTCHVIMSNEVFDQLPEASEDEEDMLDLAFGLTETSRLGCQVIVTPEMDGIVVKLPAATRNFYVDGHVPQPH 597
R +S A HGD + F + TV I + +DG +++ AK GM+++ VAH + IDLEGACE ACSTCHVIM + VFDQL EA EDEEDMLD+AFGLT+TSRLGCQV V +G V LP ATRNFYVDGHVP+PH
Sbjct: 21 RFFHASTSALHGDPSK-FANNPTVNIKFLQRDGSIREVVAKTGMSILDVAHANDIDLEGACESSMACSTCHVIMEDPVFDQLEEACEDEEDMLDMAFGLTDTSRLGCQVFVDESFEGTTVTLPKATRNFYVDGHVPKPH 158
BLAST of mRNA_Ecto-sp13_S_contig1354.2810.1 vs. uniprot
Match: A0A6G0WB78_9STRA (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WB78_9STRA) HSP 1 Score: 160 bits (404), Expect = 9.970e-43 Identity = 85/150 (56.67%), Postives = 108/150 (72.00%), Query Frame = 1
Query: 163 LQHLER--RRGISSSARARHGDHEEGFEHAQ--TVEITWENKDG-LKKTTAKCGMNLMRVAHKHGIDLEGACEGVCACSTCHVIMSNEVFDQLPEASEDEEDMLDLAFGLTETSRLGCQVIVTPEMDGIVVKLPAATRNFYVDGHVPQPH 597
++ LER RR + ++A +HG+ HA V + + KDG +K A+ G +++ VAH+H IDLEGACE ACSTCHVI+ ++FD+LPE SE+EEDMLD+AFGLT TSRLGCQVIVT +M V LPAATRNFYVDGHVP+PH
Sbjct: 6 VRFLERSMRRSVHATAFLQHGNR-----HASGPVVPLKFRLKDGSIKVVDAQIGTSILDVAHRHDIDLEGACESSLACSTCHVILEGDLFDELPEPSEEEEDMLDMAFGLTATSRLGCQVIVTEDMANTTVTLPAATRNFYVDGHVPKPH 150 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1354.2810.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1354.2810.1 >prot_Ecto-sp13_S_contig1354.2810.1 ID=prot_Ecto-sp13_S_contig1354.2810.1|Name=mRNA_Ecto-sp13_S_contig1354.2810.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=200bp MAAFGPLLLRTTTSATSRALSRNAKGAARQYRERCGAAAAASEARAAAAPback to top mRNA from alignment at Ecto-sp13_S_contig1354:10131..16240+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1354.2810.1 ID=mRNA_Ecto-sp13_S_contig1354.2810.1|Name=mRNA_Ecto-sp13_S_contig1354.2810.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=6110bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1354:10131..16240+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1354:10131..16240+ >mRNA_Ecto-sp13_S_contig1354.2810.1 ID=mRNA_Ecto-sp13_S_contig1354.2810.1|Name=mRNA_Ecto-sp13_S_contig1354.2810.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=600bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1354:10131..16240+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |