mRNA_Ecto-sp13_S_contig13502.2789.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig13502.2789.1 vs. uniprot
Match: D8LN64_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LN64_ECTSI) HSP 1 Score: 404 bits (1039), Expect = 5.380e-141 Identity = 194/199 (97.49%), Postives = 196/199 (98.49%), Query Frame = 1
Query: 1 IGCALYDMGGGGDTLVGRGDAIPDGDGPIYVCTRNDDLEDVISRTPPARREDLVFLQNGVLGPLLEKHGLAKNTQALIYFAVSKKGEAPIDGITDANPEGLTSTCGKWAGEFKERLAKGGLTCHELAEDRYTARMYEKHIWICAFMVAGAAHKCNMGQVDAEHADEVRTLIGELQKAIEVEYGVAFEDGVKERLCAYSR 597
IGCALYDMGGGGDTLVGRGD IPDGDGPIYVCTRNDDLEDVISRTPPARREDLVFLQNGVLGPLLEKHGLAKNTQALIYFAVSKKGE PIDGITDANPEGLTSTCGKWAGE KERLAKGGLTCHELAEDRYTARMYEKHIWICAFMVAGAAHKCNMGQVDA+HADEVRTLIGELQKAIEVEYGVAFEDGVK+RLCAYSR
Sbjct: 64 IGCALYDMGGGGDTLVGRGDIIPDGDGPIYVCTRNDDLEDVISRTPPARREDLVFLQNGVLGPLLEKHGLAKNTQALIYFAVSKKGEPPIDGITDANPEGLTSTCGKWAGELKERLAKGGLTCHELAEDRYTARMYEKHIWICAFMVAGAAHKCNMGQVDADHADEVRTLIGELQKAIEVEYGVAFEDGVKDRLCAYSR 262
BLAST of mRNA_Ecto-sp13_S_contig13502.2789.1 vs. uniprot
Match: A0A835YGX2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YGX2_9STRA) HSP 1 Score: 276 bits (707), Expect = 2.720e-91 Identity = 129/199 (64.82%), Postives = 155/199 (77.89%), Query Frame = 1
Query: 1 IGCALYDMGGGGDTLVGRGDAIPDGDGPIYVCTRNDDLEDVISRTPPARREDLVFLQNGVLGPLLEKHGLAKNTQALIYFAVSKKGEAPIDGITDANPEGLTSTCGKWAGEFKERLAKGGLTCHELAEDRYTARMYEKHIWICAFMVAGAAHKCNMGQVDAEHADEVRTLIGELQKAIEVEYGVAFEDGVKERLCAYSR 597
IG ALY+MG G DTLVGR IPDG GPIYVCTRNDDLE+VI RTPP+RR+DLVFLQNG+LGP L KHGL+ N+QALIYFAV+K+GE PIDG+TD NPEGLT+ GKWA FKERL+ GGL+CH L +TA+ +EKHIWICAFM+ G H ++G+V++ H +EVR LI EL A +YG F G +RLCAY+R
Sbjct: 10 IGNALYEMGDGTDTLVGRSTTIPDGQGPIYVCTRNDDLENVILRTPPSRRDDLVFLQNGILGPFLAKHGLSNNSQALIYFAVAKQGEKPIDGVTDVNPEGLTAATGKWAPAFKERLSTGGLSCHILNTTEFTAQSFEKHIWICAFMLVGVKHGASVGEVESTHGEEVRRLIDELLAATAAKYGARFRAGAPDRLCAYAR 208
BLAST of mRNA_Ecto-sp13_S_contig13502.2789.1 vs. uniprot
Match: A0A7S3S3A4_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3S3A4_9SPIT) HSP 1 Score: 228 bits (581), Expect = 1.850e-71 Identity = 116/202 (57.43%), Postives = 138/202 (68.32%), Query Frame = 1
Query: 1 IGCALYDMGGGGDTLVGRGDAIPD--GDGPIYVCTRNDDLEDVISRTPPARREDLVFLQNGVLGPLLEKHGLAKNTQALIYFAVSKKGEAPIDGITDANPEGLTSTCGKWAGEFKERLAKGGLTCHELAEDRYTARMYEKHIWICAFMVAGAAHK-CNMGQVDAEHADEVRTLIGELQKAIEVEYGVAFEDGVKERLCAYSR 597
IG L D+G GD LV RG+ IPD GPIYVCTRND L +I TPP RREDLVFLQNG+LG LE GL +Q L+Y AV+K GE P DGITD NPEGLTS GKWAG F RL KGGLTCH A D Y M EKH+WICAFM+ GA + +G+V+++H+D++R ++ EL A E E GV +DG +RL AY R
Sbjct: 62 IGSLLLDLGVEGDVLVKRGEPIPDIPESGPIYVCTRNDALAGIIESTPPNRREDLVFLQNGMLGDFLEAQGLPDASQVLVYLAVAKLGEKPTDGITDTNPEGLTSATGKWAGAFAARLKKGGLTCHVRAGDDYKKAMLEKHVWICAFMLTGALNGGITVGEVESKHSDQLRAIVDELCAAGEAELGVKLDDGAFDRLAAYGR 263
BLAST of mRNA_Ecto-sp13_S_contig13502.2789.1 vs. uniprot
Match: A0A4D9D7H8_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D7H8_9STRA) HSP 1 Score: 223 bits (567), Expect = 2.100e-70 Identity = 105/187 (56.15%), Postives = 140/187 (74.87%), Query Frame = 1
Query: 43 LVGRGDAIP-DGDGPIYVCTRNDDLEDVISRTPPARREDLVFLQNGVLGPLLEKHGLAKNTQALIYFAVSKKGEAPIDGITDANPEGLTSTCGKWAGEFKERLAKGGLTCHELAEDRYTARMYEKHIWICAFMVAGAAHK-CNMGQVDAEHADEVRTLIGELQKAIEVEYGVAFEDGVKERLCAYSR 597
+VGR D +P +G GPIYV TRNDDL V+ +TP ARR+DLVFLQNG+LGP L+K+GL NTQAL+YFAV++KG+ P DG+TD NP GLT+ G+WA +F+E L K GL CH L + R+ A M+EK +WI AFM+ G+ H +G+V+ H ++V LI EL+KA+E V F+DGV++RLCAY+R
Sbjct: 1 MVGRNDPVPVEGTGPIYVATRNDDLAAVVEKTPEARRKDLVFLQNGMLGPFLKKYGLEDNTQALVYFAVARKGDVPTDGVTDLNPNGLTAVYGEWAADFEETLTKAGLKCHMLDKGRFQAAMFEKLMWISAFMLVGSVHGGITVGEVEKSHREDVVALIQELKKALERHAKVTFQDGVEDRLCAYAR 187
BLAST of mRNA_Ecto-sp13_S_contig13502.2789.1 vs. uniprot
Match: C1EBF6_MICCC (Uncharacterized protein n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1EBF6_MICCC) HSP 1 Score: 223 bits (567), Expect = 5.420e-70 Identity = 118/202 (58.42%), Postives = 137/202 (67.82%), Query Frame = 1
Query: 1 IGCALYDMGGGGDTLVGRGDAIP--DGDGPIYVCTRNDDLEDVISRTPPARREDLVFLQNGVLGPLLEKHGLAKNTQALIYFAVSKKGEAPIDGITDANPEGLTSTCGKWAGEFKERLAKGGLTCHELAEDRYTARMYEKHIWICAFMVAGAAHK-CNMGQVDAEHADEVRTLIGELQKAIEVEYGVAFEDGVKERLCAYSR 597
+G AL DMG GD ++ RGDA P GPIYVCTRND L+ VI +TPP RR DLVFLQNG+L P L+ GL NTQALIYFAV+K GE P DGITD NPEGLT+ GK A + RLA GG+ CH L +D + A M+EK IWICAFM GAAH +G V++ H EV LI EL + E GV FE G ERLCAY+R
Sbjct: 15 VGQALADMGVPGDVIMKRGDAFPAEPSTGPIYVCTRNDALQGVIDQTPPERRADLVFLQNGMLQPWLDARGLGDNTQALIYFAVAKFGEKPTDGITDVNPEGLTAANGKHAAALQARLAAGGMRCHVLDDDAFKASMFEKLIWICAFMAVGAAHPGATVGDVESTHRAEVVELIEELLEGSAAEKGVKFEPGSVERLCAYAR 216
BLAST of mRNA_Ecto-sp13_S_contig13502.2789.1 vs. uniprot
Match: R1G2T3_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1G2T3_EMIHU) HSP 1 Score: 223 bits (567), Expect = 6.530e-70 Identity = 114/202 (56.44%), Postives = 137/202 (67.82%), Query Frame = 1
Query: 1 IGCALYDMGGGGDTLVGRGDAIP--DGDGPIYVCTRNDDLEDVISRTPPARREDLVFLQNGVLGPLLEKHGLAKNTQALIYFAVSKKGEAPIDGITDANPEGLTSTCGKWAGEFKERLAKGGLTCHELAEDRYTARMYEKHIWICAFMVAGAAHK-CNMGQVDAEHADEVRTLIGELQKAIEVEYGVAFEDGVKERLCAYSR 597
IG AL ++G GD ++ RGDA P GPIYV TRNDDL V++ TPP RR+DLVFLQNG+LG LE+ GL TQ L+Y AV+K GE PIDGITD NP+GLT+ G+WA F+ RLA GGLTCH D YT M EKH+WICAFMV GA H +G+V++ HA ++R L+ EL A E GV E G ERL AY R
Sbjct: 16 IGSALKELGVEGDVVLRRGDAFPAAPASGPIYVTTRNDDLAGVVAATPPERRQDLVFLQNGMLGEFLEEQGLPDATQVLLYLAVAKLGEPPIDGITDTNPDGLTTAKGRWAEAFRARLAGGGLTCHVKQGDEYTKAMLEKHVWICAFMVTGALHGGVTVGEVESAHASQLRALVDELCAAGEAALGVRLEPGAFERLAAYGR 217
BLAST of mRNA_Ecto-sp13_S_contig13502.2789.1 vs. uniprot
Match: C1MVB8_MICPC (Predicted protein n=2 Tax=Micromonas pusilla TaxID=38833 RepID=C1MVB8_MICPC) HSP 1 Score: 223 bits (567), Expect = 6.950e-70 Identity = 115/202 (56.93%), Postives = 136/202 (67.33%), Query Frame = 1
Query: 1 IGCALYDMGGGGDTLVGRGDAIPDGD--GPIYVCTRNDDLEDVISRTPPARREDLVFLQNGVLGPLLEKHGLAKNTQALIYFAVSKKGEAPIDGITDANPEGLTSTCGKWAGEFKERLAKGGLTCHELAEDRYTARMYEKHIWICAFMVAGAAHK-CNMGQVDAEHADEVRTLIGELQKAIEVEYGVAFEDGVKERLCAYSR 597
+G AL+DMG GD +V RGDA P GPIYVCTRND L+ V+ TP ARR+DLVFLQNG+L P L+ GL NTQAL+YFAV+K E P DGITDANPEGLT+ G+WA F RL GGL CH L +D + A M+EK IWICAFM GAAH +G V++ H +EV LI EL E GV F +G RL AY+R
Sbjct: 23 VGQALFDMGVDGDVIVKRGDAFPSSPATGPIYVCTRNDALQGVVDATPEARRKDLVFLQNGMLQPWLDARGLGGNTQALVYFAVAKMNEKPTDGITDANPEGLTAANGEWADAFAARLRSGGLRCHVLDDDAFRASMFEKLIWICAFMGVGAAHPGATVGDVESAHKEEVEALIAELVAGSESAKGVRFAEGTIPRLAAYAR 224
BLAST of mRNA_Ecto-sp13_S_contig13502.2789.1 vs. uniprot
Match: W7U5Z5_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U5Z5_9STRA) HSP 1 Score: 223 bits (568), Expect = 1.230e-69 Identity = 109/201 (54.23%), Postives = 145/201 (72.14%), Query Frame = 1
Query: 1 IGCALYDMGGGGDTLVGRGDAIP-DGDGPIYVCTRNDDLEDVISRTPPARREDLVFLQNGVLGPLLEKHGLAKNTQALIYFAVSKKGEAPIDGITDANPEGLTSTCGKWAGEFKERLAKGGLTCHELAEDRYTARMYEKHIWICAFMVAGAAHK-CNMGQVDAEHADEVRTLIGELQKAIEVEYGVAFEDGVKERLCAYSR 597
+G AL M G +VGR D +P +G GPIYV TRNDDL V+ +TP ARR+DLVFLQNG+LGP L+ +GL NTQAL+YFAV++KG+ P DG+TD NP GLT+ G+WA +F+E L K GL CH L + R+ A M+EK +WI AFM+ G+ H +G+V+ H ++V LI EL+KA+E V F+DGV++RLCAY+R
Sbjct: 55 VGEALGKMLGSSTVMVGRNDPVPIEGTGPIYVATRNDDLAAVVEKTPEARRKDLVFLQNGMLGPFLKTYGLEDNTQALVYFAVARKGDVPTDGVTDLNPNGLTAVYGEWATDFEETLTKAGLKCHILDKGRFQAAMFEKLMWISAFMLVGSVHGGITVGEVEKSHREDVVALIQELKKALERHAKVTFQDGVEDRLCAYAR 255
BLAST of mRNA_Ecto-sp13_S_contig13502.2789.1 vs. uniprot
Match: A0A6I9QFA0_ELAGV (uncharacterized protein LOC105034880 n=5 Tax=Arecaceae TaxID=4710 RepID=A0A6I9QFA0_ELAGV) HSP 1 Score: 220 bits (561), Expect = 1.360e-68 Identity = 111/201 (55.22%), Postives = 137/201 (68.16%), Query Frame = 1
Query: 1 IGCALYDMGGGGDTLVGRGDAIP-DGDGPIYVCTRNDDLEDVISRTPPARREDLVFLQNGVLGPLLEKHGLAKNTQALIYFAVSKKGEAPIDGITDANPEGLTSTCGKWAGEFKERLAKGGLTCHELAEDRYTARMYEKHIWICAFMVAGAAHK-CNMGQVDAEHADEVRTLIGELQKAIEVEYGVAFEDGVKERLCAYSR 597
+G AL DMG GGD LVGRG +P D DGPI VCTRNDDL+ V+ TPP+R DLVF QNG+L P L+ GL+ Q L YFA+SK GEAPIDG TD NPEGLT+ GKWA R+ GGL+C L ++ + +M EK IWI AFM+ GA H +G V+ E+ EV +LI EL A E G+ F++G++ERLCAYSR
Sbjct: 54 VGTALRDMGDGGDVLVGRGQPVPADFDGPILVCTRNDDLDAVLDATPPSRWNDLVFFQNGMLDPWLQSKGLSDANQVLAYFAISKLGEAPIDGKTDTNPEGLTAAYGKWASAVATRIHNGGLSCKVLEKEPFQKQMLEKLIWISAFMLVGARHPGATVGAVEKEYRTEVASLIAELASAAAAEKGIVFDEGIEERLCAYSR 254
BLAST of mRNA_Ecto-sp13_S_contig13502.2789.1 vs. uniprot
Match: A0A0G4FX93_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4FX93_VITBC) HSP 1 Score: 217 bits (552), Expect = 1.010e-67 Identity = 110/200 (55.00%), Postives = 137/200 (68.50%), Query Frame = 1
Query: 1 IGCALYDMGGGGDTLVGRGDAIP-DGDGPIYVCTRNDDLEDVISRTPPARREDLVFLQNGVLGPLLEKHGLAKNTQALIYFAVSKKGEAPIDGITDANPEGLTSTCGKWAGEFKERLAKGGLTCHELAEDRYTARMYEKHIWICAFMVAGAAHKCNMGQVDAEHADEVRTLIGELQKAIEVEYGVAFEDGVKERLCAYSR 597
IG LY++GG LVGR D IP D +GPIYVCTRND L +I +TP +RREDLVFLQNG+L P L+ + L NT LIYFAV+K GE PIDG TD NPEGLT+ GKWA +F L G L+C L + + A MYEK IWI AFM+ G + +G+V+ H EV LIGEL++A E G+ F+DG+ ERLC+Y+R
Sbjct: 14 IGSLLYELGGRSGVLVGRDDPIPADVEGPIYVCTRNDALASIIDKTPASRREDLVFLQNGMLEPFLQSYALQDNTMGLIYFAVAKLGEPPIDGKTDVNPEGLTAVNGKWANDFAALLRNGQLSCKVLEKAVFRASMYEKLIWIAAFMLVGTKYGVTVGEVEQSHRQEVTELIGELKRASEG-LGITFQDGMVERLCSYTR 212 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13502.2789.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig13502.2789.1 >prot_Ecto-sp13_S_contig13502.2789.1 ID=prot_Ecto-sp13_S_contig13502.2789.1|Name=mRNA_Ecto-sp13_S_contig13502.2789.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=193bp MGGGGDTLVGRGDAIPDGDGPIYVCTRNDDLEDVISRTPPARREDLVFLQback to top mRNA from alignment at Ecto-sp13_S_contig13502:442..4706- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig13502.2789.1 ID=mRNA_Ecto-sp13_S_contig13502.2789.1|Name=mRNA_Ecto-sp13_S_contig13502.2789.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4265bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13502:442..4706- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig13502:442..4706- >mRNA_Ecto-sp13_S_contig13502.2789.1 ID=mRNA_Ecto-sp13_S_contig13502.2789.1|Name=mRNA_Ecto-sp13_S_contig13502.2789.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=579bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13502:442..4706- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |