mRNA_Ecto-sp13_S_contig13468.2762.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig13468.2762.1
Unique NamemRNA_Ecto-sp13_S_contig13468.2762.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig13468.2762.1 vs. uniprot
Match: D7FJS5_ECTSI (Glycosyltransferase, family GT4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJS5_ECTSI)

HSP 1 Score: 1031 bits (2666), Expect = 0.000e+0
Identity = 527/594 (88.72%), Postives = 547/594 (92.09%), Query Frame = 1 
Query:  283 MFLDSGVRGQQVEPDKDIFTSSGELMKGRSHHQEKGAEATEKMATVFRGRQTDGVEQQLLVGATDNLVVESEKPLPTPLPTQNDTAAIWITRPLNDTILPLGDVVLTFETHGFTPAVETPIEANLQVLMPQNGDTPFLLEKGNSMILSSDMPCTQQVTLYATVRGERVSASVLFSTVLGREAILSARTPLPSGVVWGRPRSMVCPPKKREHEEGGNSASLPKGDRSTWQTHESGTDVMVGKGGLYWSSGSAESQRCDSGEETTDGLPRPISLVFVGSLSLDGQKHVWLQQLEQLPRVRFAAKFLTFEEQEGTHGSTARAWKTNAAESFKQRLSRAGVPLVTVRLPQVNSSWIYQGVGGEVAPTHTLKEMAFKVVLESFHRAGGNPHLMGPTWTGDIFQHIADAVESASPDVLVIANGKTLGDDLLTKAARWAMRDNSGFKIVMDFPNIRPALGVDVDVIATPSHYVARHRDTQALAAAAGAEVVVIPPGVPVASTLSQAKTLLADELASLDRTSG------VCDSGMLNTLGCCDPACHVVGFAGRLAPEKGPGLFMVVAEALAQLIPSAVFVVVGDGPLRISLEAAAERMGIA 2046
            MFLDSGVRGQQVEPDKDIFTSSGELMKGRSHH+E+G E TE+M +VFRG Q D VEQ+LLVGATDNLV ESEKPL TPLPT+NDTAA+WITRPLNDTILPLGD+ LTFETHGFTPAVETPIE    VLMPQNGDTPFLLEKGNSMILSSDMPCTQQVTLYATVRGERVSASVLFSTVLGREAILSARTPLPSG  WGRPR MVCPP  REHEEG NSASLPKGD STWQTHE GT VMVGKGG+Y SSGSAESQ CDSGEETT+GLPRPISLVFVGSLSLDGQKHVWLQQLEQ  RVRFA KFLTFEEQEG +GSTA AWK+NAAESFKQRLSRAGVPLVTVRLPQVNSSWI+  +GG+VAPTHTLKEMAFK VLES HRAGGNPHLM P WTG+IFQHIADAVESASPDVLVIANGKTLGDDLLTKAARWAMRDNSGFKIVMDFPNI PALGVDVDVIATPSHYVARHRDT+ALAAAAGAEVVVIPPGVPVA TLSQAK LLADEL SLDRTSG      VCDSGMLN LGCCDPACHVVGFAGRLAPEKGPGLFMVVAEA+A+LIPSAVFVVVGDGPLR SLEAAAERMG+A
Sbjct:   21 MFLDSGVRGQQVEPDKDIFTSSGELMKGRSHHREEGVEVTERMPSVFRGGQIDSVEQKLLVGATDNLVAESEKPLSTPLPTKNDTAALWITRPLNDTILPLGDIFLTFETHGFTPAVETPIE----VLMPQNGDTPFLLEKGNSMILSSDMPCTQQVTLYATVRGERVSASVLFSTVLGREAILSARTPLPSGAAWGRPRLMVCPPLVREHEEGYNSASLPKGDTSTWQTHEGGTGVMVGKGGVYCSSGSAESQGCDSGEETTEGLPRPISLVFVGSLSLDGQKHVWLQQLEQFSRVRFAPKFLTFEEQEGRNGSTAGAWKSNAAESFKQRLSRAGVPLVTVRLPQVNSSWIHDSIGGQVAPTHTLKEMAFKAVLESIHRAGGNPHLMSPPWTGEIFQHIADAVESASPDVLVIANGKTLGDDLLTKAARWAMRDNSGFKIVMDFPNIGPALGVDVDVIATPSHYVARHRDTKALAAAAGAEVVVIPPGVPVAPTLSQAKNLLADELLSLDRTSGELRRERVCDSGMLNKLGCCDPACHVVGFAGRLAPEKGPGLFMVVAEAVAKLIPSAVFVVVGDGPLRTSLEAAAERMGMA 610
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BLAST of mRNA_Ecto-sp13_S_contig13468.2762.1 vs. uniprot
Match: A0A6H5K6W1_9PHAE (GT4 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6W1_9PHAE)

HSP 1 Score: 992 bits (2565), Expect = 0.000e+0
Identity = 519/631 (82.25%), Postives = 548/631 (86.85%), Query Frame = 1 
Query:  283 MFLDSGVRGQQVEPDKDIFTSSGELMKGRSHHQEKGAEATEKMATVFRGRQTDGVEQQLLVGATDNLVVESEKPLPTPLPTQNDTAAIWITRPLNDTILPLGDVVLTFETHGFTPAVETPIEANLQ---------VLMPQNGDTPFLLEKGNSMILSSDMPCTQQVTLYATVRGERVSASVLFSTVLGREAILSARTPLPSGVVWGRPRSMVCPPKKREHEEGGNSASLPKGDRSTWQTHESGTDVMVGKGGLYWSSGSAESQRCDSGEETTDGLPRPISLVFVGSLSLDGQKHVWLQQLEQLPRVRFAAKFLTFEEQEGTHGSTARAWKTNAAESFKQRLSRAGVPLVTVRLPQVNSSWIYQGVGGEVAPTHTLKEMAFKVVLESFHRAGGNPHLMGPTWTGDIFQHIADAVESASPDVLVIANGKTLGDDLLTKAARWAMRDNSGFKIVMDFPNIRPALGVDVDVIATPSHYVARHRDTQALAAAAGAEVVVIPPGVPVASTLSQAKTLLADELASLDRTSG------VCDSGMLNTLGCCDPACHV---------------------------VGFAGRLAPEKGPGLFMVVAEALAQLIPSAVFVVVGDGPLRISLEAAAERMGIAR 2049
            MFLDSGVRGQ VEPDKDIFT SGELMKG SHH+E+  EATE++A+VFR RQT  VEQQLLVGATDNLV E EKPLPTPLPT+NDTAAIWITRPLNDTILPLGDV LTFETHGFTPAVETPIEA++          VL  QNGDTPFLLEKGNS+ILSSD+PCTQQVTLYATVRGERVSASVLFSTVLGREAILSARTPLPSGVVWGRPRSMVCPP  REH++G   ASLPKGD+STWQTHE GTDVMVGKGGL  SSGSAESQRCDSGEE  +GLPRPISLV+VGSLSLDGQKH+WLQQLEQLPRVRFAAKFLTFEEQEGT GSTA AWKTNAAESFKQRLSRAGVPLVTVRLPQVNSSWI+  +G + APT+TLKEMAF+ VLESFHRAGGNPH+M P WTG+IFQHIADAV+SASPDVLV+ANGKTLGDD+LTKAARWAMRDNSGFKIVMDFPNI P+LGVDVDVIATPSHYVARH DTQALAAAAGAEVVVIPPGVPVAS LSQAKTLLADEL S  RTSG      VCDSGMLN LGCCDPACHV                           VGFAGRLAPEKGPGLFMVVAEALA+LIPSAVF+VVGDGPLR SLEAAAERMGIAR
Sbjct:    1 MFLDSGVRGQPVEPDKDIFTPSGELMKGPSHHREEDTEATERIASVFRARQTGSVEQQLLVGATDNLVAEGEKPLPTPLPTKNDTAAIWITRPLNDTILPLGDVFLTFETHGFTPAVETPIEASMSRGATFRFSSVLTSQNGDTPFLLEKGNSIILSSDIPCTQQVTLYATVRGERVSASVLFSTVLGREAILSARTPLPSGVVWGRPRSMVCPPLIREHKKGDIFASLPKGDKSTWQTHEGGTDVMVGKGGLCCSSGSAESQRCDSGEEAIEGLPRPISLVYVGSLSLDGQKHIWLQQLEQLPRVRFAAKFLTFEEQEGTRGSTAGAWKTNAAESFKQRLSRAGVPLVTVRLPQVNSSWIHDTIGRQ-APTNTLKEMAFRTVLESFHRAGGNPHVMSPQWTGEIFQHIADAVQSASPDVLVMANGKTLGDDVLTKAARWAMRDNSGFKIVMDFPNIGPSLGVDVDVIATPSHYVARHPDTQALAAAAGAEVVVIPPGVPVASPLSQAKTLLADELLSPGRTSGELRRECVCDSGMLNKLGCCDPACHVRKYETVLDKLVHAAASAVLAMLWPIQVVGFAGRLAPEKGPGLFMVVAEALAKLIPSAVFIVVGDGPLRTSLEAAAERMGIAR 630
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BLAST of mRNA_Ecto-sp13_S_contig13468.2762.1 vs. uniprot
Match: G4ZX09_PHYSP (Glycos_transf_1 domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZX09_PHYSP)

HSP 1 Score: 73.2 bits (178), Expect = 7.460e-10
Identity = 82/348 (23.56%), Postives = 134/348 (38.51%), Query Frame = 1 
Query: 1072 DGLPRPISLVFVGSLS--LDGQKHVWLQQLEQLP------RVRFAAKFLTFEEQEGTHGSTARAWKTNAAESFKQRLSRAGVPLVTVRLPQVNSSWIYQGVGGEVAPTHTLKEMAFKVVLESFHRAG-------------GNPHL--MGPTWTGDIFQHIADAVESASPDVLVI-ANGKTLGDDLLTKAARWAMRDNSGFKIVMDFPNIRPALGVDVDVIATPSHYVARHRDTQALAAAAGAEVVVIPPGVPVASTLSQAKTLLADELASLDRTSGVCDSGMLNTLGCCDPACHVVGFAGRLAPEKGPGLFMVVAEALAQLIPSAVFVVVGDGPLRISLEAAAERMGI 2043
            D +   + + +V S S   DGQ+ +WLQ +E L        V F  +  TFE+          A  T A +     L   G+PL                   E++   T  +     +L SF+R                 P L  + P +   ++  + +A+ S   D L+I +N + + D+LL  AAR A        I+M+  N+ P   VDVD +  PSH+   H                        +  ++ K +LA  + +   T               D    V+G+ GRLAPEK  G+ +   + L  +      ++VGDGP ++ L++ A   G+
Sbjct:  156 DSIAEVLPVCYVSSTSGAFDGQRRMWLQIMEGLRGEKNNNTVEFQFEVKTFEQ------VVTNAPLTRALQRLNVNLQ--GLPLEIFL--------------NELSDEDTSPDGVINALLASFYRRFPWARHDSRQISKLDQPDLRRLDPPYAARVWTDLVNALSSPCADGLIIFSNSRRISDELLVLAARLA----GPRAIIMELANLHPTK-VDVDFLLAPSHFARDHYSISR-------------------NIRARHKVVLATGVNTRQFTPATAPPS--------DEQTFVIGYVGRLAPEKSLGILLAAMKILGPICSRCRLLIVGDGPQKLQLQSIASEWGL 449
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BLAST of mRNA_Ecto-sp13_S_contig13468.2762.1 vs. uniprot
Match: A0A847DY47_9BURK (Glycosyltransferase n=1 Tax=Limnobacter sp. TaxID=2003368 RepID=A0A847DY47_9BURK)

HSP 1 Score: 61.6 bits (148), Expect = 8.680e-7
Identity = 28/54 (51.85%), Postives = 40/54 (74.07%), Query Frame = 1 
Query: 1882 VVGFAGRLAPEKGPGLFMVVAEALAQLIPSAVFVVVGDGPLRISLEAAAERMGI 2043
            +VGF GRL+PEKGP LF+  A+ + +  P A FVV+GDGP R ++EA  +R+G+
Sbjct:   28 LVGFVGRLSPEKGPELFVRCAQRVLERQPQAHFVVIGDGPQRATVEARIDRLGL 81
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BLAST of mRNA_Ecto-sp13_S_contig13468.2762.1 vs. uniprot
Match: A0A846U3H8_9BURK (Glycosyltransferase involved in cell wall biosynthesis n=1 Tax=Rhizobacter sp. SG703 TaxID=2587140 RepID=A0A846U3H8_9BURK)

HSP 1 Score: 60.5 bits (145), Expect = 6.010e-6
Identity = 28/54 (51.85%), Postives = 38/54 (70.37%), Query Frame = 1 
Query: 1882 VVGFAGRLAPEKGPGLFMVVAEALAQLIPSAVFVVVGDGPLRISLEAAAERMGI 2043
            ++GF GRL+PEKGP +F+  A  L   +P A FV+VGDGPLR S++   ER G+
Sbjct:  213 LIGFVGRLSPEKGPEVFLRAALLLRATLPRARFVLVGDGPLRASVQQFIERFGL 266
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BLAST of mRNA_Ecto-sp13_S_contig13468.2762.1 vs. uniprot
Match: A0A0Q6LEL8_9BURK (Uncharacterized protein n=2 Tax=Rhizobacter TaxID=212743 RepID=A0A0Q6LEL8_9BURK)

HSP 1 Score: 59.7 bits (143), Expect = 9.270e-6
Identity = 28/54 (51.85%), Postives = 38/54 (70.37%), Query Frame = 1 
Query: 1882 VVGFAGRLAPEKGPGLFMVVAEALAQLIPSAVFVVVGDGPLRISLEAAAERMGI 2043
            ++GF GRL+PEKGP +F+  A  L   +P A F +VGDGPLR S++ A ER G+
Sbjct:  185 LIGFVGRLSPEKGPEVFLRAALLLRTTLPRARFALVGDGPLRPSVQQAIERHGL 238
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BLAST of mRNA_Ecto-sp13_S_contig13468.2762.1 vs. uniprot
Match: A0A6G8Q0A9_9ACTN (Glycosyltransferase n=1 Tax=Rubrobacter marinus TaxID=2653852 RepID=A0A6G8Q0A9_9ACTN)

HSP 1 Score: 56.2 bits (134), Expect = 2.030e-5
Identity = 27/54 (50.00%), Postives = 37/54 (68.52%), Query Frame = 1 
Query: 1882 VVGFAGRLAPEKGPGLFMVVAEALAQLIPSAVFVVVGDGPLRISLEAAAERMGI 2043
            +VG   RL PEKG   F+  A ++A+ +P+A FVVVGDGP+R  L A A R+G+
Sbjct:    1 MVGMIARLQPEKGVASFLKAAASVAEELPAARFVVVGDGPMREELHALAGRLGV 54
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BLAST of mRNA_Ecto-sp13_S_contig13468.2762.1 vs. uniprot
Match: A0A520BRE0_9BURK (Glycosyltransferase family 1 protein n=1 Tax=Rubrivivax sp. TaxID=50259 RepID=A0A520BRE0_9BURK)

HSP 1 Score: 58.5 bits (140), Expect = 2.470e-5
Identity = 28/56 (50.00%), Postives = 39/56 (69.64%), Query Frame = 1 
Query: 1882 VVGFAGRLAPEKGPGLFMVVAEALAQLIPSAVFVVVGDGPLRISLEAAAERMGIAR 2049
            +VGF GRL+PEKGP +F+  A  L +  P A  V +G+GP+R  + A AER+G+AR
Sbjct:  196 LVGFVGRLSPEKGPEVFVRAASQLLRRQPQAHSVFIGEGPMRGEVAALAERLGLAR 251
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BLAST of mRNA_Ecto-sp13_S_contig13468.2762.1 vs. uniprot
Match: A0A1H7K5T9_9PROT (Glycosyltransferase involved in cell wall bisynthesis n=1 Tax=Nitrosovibrio tenuis TaxID=1233 RepID=A0A1H7K5T9_9PROT)

HSP 1 Score: 58.2 bits (139), Expect = 2.910e-5
Identity = 27/58 (46.55%), Postives = 39/58 (67.24%), Query Frame = 1 
Query: 1870 PACHVVGFAGRLAPEKGPGLFMVVAEALAQLIPSAVFVVVGDGPLRISLEAAAERMGI 2043
            P   +VGF GRLAPEKGP +F+ VA  + + + +  FV+VGDGPLR  L+   + +G+
Sbjct:  189 PDAQLVGFIGRLAPEKGPDVFIKVASIVLKTLKNCHFVLVGDGPLREKLKDDIDNLGL 246
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BLAST of mRNA_Ecto-sp13_S_contig13468.2762.1 vs. uniprot
Match: A0A7C2U332_9BACT (Glycosyltransferase family 1 protein n=1 Tax=bacterium TaxID=1869227 RepID=A0A7C2U332_9BACT)

HSP 1 Score: 58.2 bits (139), Expect = 3.160e-5
Identity = 30/58 (51.72%), Postives = 38/58 (65.52%), Query Frame = 1 
Query: 1870 PACHVVGFAGRLAPEKGPGLFMVVAEALAQLIPSAVFVVVGDGPLRISLEAAAERMGI 2043
            P   VVG   RL+P+K P  F+  A A+A+ IPSA FV+VGDGPLR  LEA   + G+
Sbjct:  215 PDAPVVGTVTRLSPQKAPADFVTAAIAVAEAIPSAHFVIVGDGPLRGQLEAMIAQAGL 272
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13468.2762.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
D7FJS5_ECTSI0.000e+088.72Glycosyltransferase, family GT4 n=1 Tax=Ectocarpus... [more]
A0A6H5K6W1_9PHAE0.000e+082.25GT4 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
G4ZX09_PHYSP7.460e-1023.56Glycos_transf_1 domain-containing protein n=1 Tax=... [more]
A0A847DY47_9BURK8.680e-751.85Glycosyltransferase n=1 Tax=Limnobacter sp. TaxID=... [more]
A0A846U3H8_9BURK6.010e-651.85Glycosyltransferase involved in cell wall biosynth... [more]
A0A0Q6LEL8_9BURK9.270e-651.85Uncharacterized protein n=2 Tax=Rhizobacter TaxID=... [more]
A0A6G8Q0A9_9ACTN2.030e-550.00Glycosyltransferase n=1 Tax=Rubrobacter marinus Ta... [more]
A0A520BRE0_9BURK2.470e-550.00Glycosyltransferase family 1 protein n=1 Tax=Rubri... [more]
A0A1H7K5T9_9PROT2.910e-546.55Glycosyltransferase involved in cell wall bisynthe... [more]
A0A7C2U332_9BACT3.160e-551.72Glycosyltransferase family 1 protein n=1 Tax=bacte... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13468contigEcto-sp13_S_contig13468:484..3663 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score1036.2
Seed ortholog evalue6.2e-300
Seed eggNOG ortholog2880.D7FJS5
Model size2052
Hectar predicted targeting categorysignal peptide
Exons4
EggNOG free text desc.Glycosyl transferases group 1
EggNOG OGs2E46J@1,2SB4R@2759
Cds size1836
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462719.0322788-CDS-Ecto-sp13_S_contig13468:483..6541681462719.0322788-CDS-Ecto-sp13_S_contig13468:483..654Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13468 484..654 -
1681462719.0446231-CDS-Ecto-sp13_S_contig13468:1184..24131681462719.0446231-CDS-Ecto-sp13_S_contig13468:1184..2413Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13468 1185..2413 -
1681462719.0541177-CDS-Ecto-sp13_S_contig13468:2706..30761681462719.0541177-CDS-Ecto-sp13_S_contig13468:2706..3076Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13468 2707..3076 -
1681462719.0632126-CDS-Ecto-sp13_S_contig13468:3381..34471681462719.0632126-CDS-Ecto-sp13_S_contig13468:3381..3447Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13468 3382..3447 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462719.0727735-UTR-Ecto-sp13_S_contig13468:3447..36631681462719.0727735-UTR-Ecto-sp13_S_contig13468:3447..3663Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig13468 3448..3663 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13468.2762.1prot_Ecto-sp13_S_contig13468.2762.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig13468 484..3447 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig13468.2762.1

>prot_Ecto-sp13_S_contig13468.2762.1 ID=prot_Ecto-sp13_S_contig13468.2762.1|Name=mRNA_Ecto-sp13_S_contig13468.2762.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=612bp
MPLWGASVVCCCTQAIRLLSAAMFLDSGVRGQQVEPDKDIFTSSGELMKG
RSHHQEKGAEATEKMATVFRGRQTDGVEQQLLVGATDNLVVESEKPLPTP
LPTQNDTAAIWITRPLNDTILPLGDVVLTFETHGFTPAVETPIEANLQVL
MPQNGDTPFLLEKGNSMILSSDMPCTQQVTLYATVRGERVSASVLFSTVL
GREAILSARTPLPSGVVWGRPRSMVCPPKKREHEEGGNSASLPKGDRSTW
QTHESGTDVMVGKGGLYWSSGSAESQRCDSGEETTDGLPRPISLVFVGSL
SLDGQKHVWLQQLEQLPRVRFAAKFLTFEEQEGTHGSTARAWKTNAAESF
KQRLSRAGVPLVTVRLPQVNSSWIYQGVGGEVAPTHTLKEMAFKVVLESF
HRAGGNPHLMGPTWTGDIFQHIADAVESASPDVLVIANGKTLGDDLLTKA
ARWAMRDNSGFKIVMDFPNIRPALGVDVDVIATPSHYVARHRDTQALAAA
AGAEVVVIPPGVPVASTLSQAKTLLADELASLDRTSGVCDSGMLNTLGCC
DPACHVVGFAGRLAPEKGPGLFMVVAEALAQLIPSAVFVVVGDGPLRISL
EAAAERMGIAR*
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mRNA from alignment at Ecto-sp13_S_contig13468:484..3663-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig13468.2762.1 ID=mRNA_Ecto-sp13_S_contig13468.2762.1|Name=mRNA_Ecto-sp13_S_contig13468.2762.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3180bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13468:484..3663- (Ectocarpus species13 EcNAP12_S_4_19m)
AGGGAATCCTGGGGGCCCTTAGGTCTAGGCCCATAGGTTCCGAGGGGCGC
TCCGTCAGTCGGAGGGGGAAGGGAAACGACGCTAGCATCTCGTTTTAGCC
GAGTCCTGTTTTGTTGCGAAACGAATGGCAGGACACAACAACGAGAACTG
CTGGATGGATAACGTTCAAGTAGAGTTCCACTTGTTGAACAGCTAACGGA
TCCTATTCCCCCGACCATGCCCTTGTGGGGGGCGTCAGTGGTATGCTGCT
GTACACAGGCTATTCGACTACTTTCCGCTGCGGTGAGCGTGAAAAAAAGG
GCACAGCAGTGCAGTAGAAGGATCTATCTTTTGTAACAACAGAGGACTGC
TGTATTGTGGTACTCGTTGAACGTACTGTACATGGTACACTCTAATGCTA
AACTACAAGTTAGACGGTAGATAACGGCACGATGGTGTTCCTACGTATCG
TACGGTACAGCAGTAGCTATATGCAAAGCGTTCTGGAAGCATATGGCCGG
CAACTTCGTTGGTGGCGTGATGGTTTGTTGGCTCATATCATGCGAAAGGG
CCAATGAATACTATCTATTTGCTTTGCTGGTATATAGATGTTCCTGGACA
GCGGAGTCCGGGGGCAACAAGTCGAGCCTGACAAGGACATCTTCACGTCC
TCTGGAGAGCTGATGAAAGGGCGATCACACCACCAAGAGAAGGGCGCCGA
AGCGACTGAAAAGATGGCTACCGTCTTTCGAGGAAGACAAACTGACGGCG
TGGAACAACAGCTTCTTGTTGGTGCGACAGACAACCTGGTTGTCGAGAGT
GAGAAGCCTTTGCCGACCCCTTTGCCGACGCAAAACGACACCGCAGCTAT
CTGGATCACGCGGCCGTTGAACGACACAATTTTGCCCTTGGGGGACGTTG
TCCTGACTTTCGAAACGCACGGATTTACGCCAGCCGTGGAGACCCCGATC
GAGGCAAGTATGAGTCGAGGAGCCACATTTTGCTTCTCGAGCGTTCCGAT
AGAACCAAACACCACCTGGGCATTGTGTATGTTGTTGTAACCTGCATACA
TACCATTGTATTTGCTTGAATATTTTTGAGGAGATATTAAGCGGGTGCGA
TCCTCGGCCTTCTGCAGTGCAACTGGAGAACCCGGAAGCGCACTACGTAA
TCAAACGCGTTGAACAATTATGCGTTGGACGTTGCCGCATTATTTGCTGT
GCGGTCTGGTGATCATTGTTCACCCCAACCTCATAGTCCCGATTTTCTAG
ACCTGCAGGTGCTCATGCCTCAAAACGGGGACACACCGTTCCTCCTGGAG
AAAGGCAACTCTATGATCCTGTCTTCGGACATGCCGTGCACTCAACAAGT
CACATTGTACGCAACCGTTAGGGGGGAACGCGTATCGGCTTCAGTTCTGT
TTTCAACGGTTCTGGGCAGAGAAGCGATACTGTCGGCCAGGACACCGTTG
CCATCTGGTGTTGTGTGGGGTCGTCCGCGTTCGATGGTATGCCCTCCCAA
AAAACGCGAACACGAGGAGGGCGGTAACTCTGCCAGCTTACCCAAGGGCG
ACAGGAGTACCTGGCAGACGCATGAGAGTGGGACGGACGTGATGGTTGGA
AAAGGAGGACTCTACTGGAGTAGTGGAAGTGCAGAATCACAGCGATGCGA
TTCCGGCGAGGAGACGACCGATGGGCTTCCACGTCCGATATCCCTCGTAT
TTGTGGGGTCCTTGAGTCTGGACGGCCAAAAACACGTCTGGCTGCAGCAG
CTGGAACAGCTTCCTCGGGTGCGGTTCGCTGCAAAGTTTTTGACGTTCGA
AGAACAAGAGGGGACACACGGCAGCACCGCACGCGCTTGGAAGACCAACG
CCGCCGAAAGTTTCAAGCAGAGGCTGAGTCGTGCCGGCGTGCCGCTGGTC
ACGGTACGGTTGCCGCAAGTTAACTCGAGTTGGATATACCAGGGTGTTGG
CGGGGAAGTAGCGCCTACCCACACTCTCAAAGAGATGGCCTTCAAGGTTG
TGCTCGAGAGCTTCCACCGTGCGGGGGGCAACCCGCATCTGATGGGCCCT
ACGTGGACCGGAGACATTTTCCAACACATCGCGGATGCGGTAGAGAGTGC
CTCTCCAGACGTGCTAGTCATCGCCAATGGGAAAACATTGGGGGACGATC
TCCTTACGAAAGCCGCTCGGTGGGCAATGCGCGACAACAGCGGCTTCAAG
ATTGTGATGGACTTCCCAAACATTAGACCCGCGCTGGGTGTAGATGTCGA
TGTTATAGCCACACCGTCGCACTACGTGGCCCGGCATCGGGACACCCAAG
CTCTGGCCGCGGCGGCCGGGGCAGAGGTGGTAGTCATTCCTCCCGGGGTT
CCGGTCGCGTCTACCCTGTCACAGGCGAAGACCCTCCTTGCTGACGAATT
AGCGTCTCTCGACAGAACGTCGGGAGTCTGCGACAGCGGCATGCTGAACA
CGCTCGGGTGTTGTGACCCAGCCTGCCACGTGAGGAAGAATGAGACTGTT
TGAGACAAACTCGTTCACGCCGCTGCAAGCGCAGTGTTGGCCATGCTTTG
GCCGACACATCAAGAGTATCAAGTTGTTTCATGACGGGGGGGGGCTTGCT
CACACGTACAGGCCAACAATGCGCTTGACTATGGCACAGCAGTGATGGCT
GCTGCGCGCTTTGCTTGTACCACACGAGAGAAGTATCCAGAAATATATGG
TGTTGATGATCGCAAACAAACGGGGGGGGCATCATGCGTACTTCAGCGAT
GTGTCGCCCTCCGGGCGGGCTTGAGATATTTCCTCTTCTCGAAAGCTTGA
GACCACGTGTCTGGAAAATAAACAAGGCGATTGCCAAGTTTGTGGTTCAG
GTTTCGGAACTCTCGTAACGTACAATTTGCATGGGCTGCTAAAACTCTAG
TCGGGATCGTTTGGAACGCGTAGATCGCCGTTCCGTCCCCCCCTTAATCC
CAGGTTGTCAATGCGCCACCATCACCGTTGCGCCCGCCGCCCTCTCCCCC
TCGCAACAGGTGGTCGGCTTTGCAGGCCGTTTAGCCCCCGAGAAGGGCCC
TGGTCTTTTCATGGTCGTTGCTGAGGCCCTCGCACAGCTGATCCCTTCTG
CTGTTTTCGTCGTCGTGGGAGACGGCCCCCTAAGAATTTCCTTGGAAGCA
GCGGCTGAGAGAATGGGGATAGCGAGGTGA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig13468:484..3663-

>mRNA_Ecto-sp13_S_contig13468.2762.1 ID=mRNA_Ecto-sp13_S_contig13468.2762.1|Name=mRNA_Ecto-sp13_S_contig13468.2762.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1836bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13468:484..3663- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCCCTTGTGGGGGGCGTCAGTGGTATGCTGCTGTACACAGGCTATTCG
ACTACTTTCCGCTGCGATGTTCCTGGACAGCGGAGTCCGGGGGCAACAAG
TCGAGCCTGACAAGGACATCTTCACGTCCTCTGGAGAGCTGATGAAAGGG
CGATCACACCACCAAGAGAAGGGCGCCGAAGCGACTGAAAAGATGGCTAC
CGTCTTTCGAGGAAGACAAACTGACGGCGTGGAACAACAGCTTCTTGTTG
GTGCGACAGACAACCTGGTTGTCGAGAGTGAGAAGCCTTTGCCGACCCCT
TTGCCGACGCAAAACGACACCGCAGCTATCTGGATCACGCGGCCGTTGAA
CGACACAATTTTGCCCTTGGGGGACGTTGTCCTGACTTTCGAAACGCACG
GATTTACGCCAGCCGTGGAGACCCCGATCGAGGCAAACCTGCAGGTGCTC
ATGCCTCAAAACGGGGACACACCGTTCCTCCTGGAGAAAGGCAACTCTAT
GATCCTGTCTTCGGACATGCCGTGCACTCAACAAGTCACATTGTACGCAA
CCGTTAGGGGGGAACGCGTATCGGCTTCAGTTCTGTTTTCAACGGTTCTG
GGCAGAGAAGCGATACTGTCGGCCAGGACACCGTTGCCATCTGGTGTTGT
GTGGGGTCGTCCGCGTTCGATGGTATGCCCTCCCAAAAAACGCGAACACG
AGGAGGGCGGTAACTCTGCCAGCTTACCCAAGGGCGACAGGAGTACCTGG
CAGACGCATGAGAGTGGGACGGACGTGATGGTTGGAAAAGGAGGACTCTA
CTGGAGTAGTGGAAGTGCAGAATCACAGCGATGCGATTCCGGCGAGGAGA
CGACCGATGGGCTTCCACGTCCGATATCCCTCGTATTTGTGGGGTCCTTG
AGTCTGGACGGCCAAAAACACGTCTGGCTGCAGCAGCTGGAACAGCTTCC
TCGGGTGCGGTTCGCTGCAAAGTTTTTGACGTTCGAAGAACAAGAGGGGA
CACACGGCAGCACCGCACGCGCTTGGAAGACCAACGCCGCCGAAAGTTTC
AAGCAGAGGCTGAGTCGTGCCGGCGTGCCGCTGGTCACGGTACGGTTGCC
GCAAGTTAACTCGAGTTGGATATACCAGGGTGTTGGCGGGGAAGTAGCGC
CTACCCACACTCTCAAAGAGATGGCCTTCAAGGTTGTGCTCGAGAGCTTC
CACCGTGCGGGGGGCAACCCGCATCTGATGGGCCCTACGTGGACCGGAGA
CATTTTCCAACACATCGCGGATGCGGTAGAGAGTGCCTCTCCAGACGTGC
TAGTCATCGCCAATGGGAAAACATTGGGGGACGATCTCCTTACGAAAGCC
GCTCGGTGGGCAATGCGCGACAACAGCGGCTTCAAGATTGTGATGGACTT
CCCAAACATTAGACCCGCGCTGGGTGTAGATGTCGATGTTATAGCCACAC
CGTCGCACTACGTGGCCCGGCATCGGGACACCCAAGCTCTGGCCGCGGCG
GCCGGGGCAGAGGTGGTAGTCATTCCTCCCGGGGTTCCGGTCGCGTCTAC
CCTGTCACAGGCGAAGACCCTCCTTGCTGACGAATTAGCGTCTCTCGACA
GAACGTCGGGAGTCTGCGACAGCGGCATGCTGAACACGCTCGGGTGTTGT
GACCCAGCCTGCCACGTGGTCGGCTTTGCAGGCCGTTTAGCCCCCGAGAA
GGGCCCTGGTCTTTTCATGGTCGTTGCTGAGGCCCTCGCACAGCTGATCC
CTTCTGCTGTTTTCGTCGTCGTGGGAGACGGCCCCCTAAGAATTTCCTTG
GAAGCAGCGGCTGAGAGAATGGGGATAGCGAGGTGA
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