mRNA_Ecto-sp13_S_contig13448.2749.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig13448.2749.1 vs. uniprot
Match: D8LKI3_ECTSI (Calpain 8 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKI3_ECTSI) HSP 1 Score: 724 bits (1869), Expect = 1.740e-258 Identity = 348/367 (94.82%), Postives = 357/367 (97.28%), Query Frame = 1
Query: 1 MHSLFDFGLDGDLHLPEITILVRTALIACAKLDSRVKTPSTEAIEGLCQMAFNQAGLDDEGALAKHLFESFVSSDAQMTAFLQLWSDSISQAAVSEGTLWEDPDFPADASALSLVAGTVPPGIPPGEAVRWLRPSEVAGGEAVLFVGDVPGDGPMVPGQLADQWLLSAIGLLTGRPHLLRSLFVPTGQEALGRYCVRLFKEANWINVFVDTCIACNAFGDPLFCRGEERHELWGFLLEKAYAKAHGCYENLMHGDTREALRDLTGGVSEKLQWQLGGRPGTAGGSAATPGQAAPEQQQEIPRPRVAGWGILAGTTPPLGWVFENIRDRLADGQVLGCSRQAWLRCPWGGGDQQEAADGGMLFPPSNR 1101
MHSLFDFGLDGDLHLPE+TILVRTALIACAKLDSRV TPSTEAIEGLC+ AFNQAGLDDEGALAKHLFESFVSSD+QMTAFLQLWSDSISQAAV+EGTLWEDPDFPAD SALSLVAGTVPPGIPPGEAVRWLRPSEVAGGEAVLFVGDVPGDGPMVPGQLADQWLLSAIG+LTGRP LLRSLFVPTGQEALGRYCVRLFKEANWINVFVDT IACNA GDPLFCRGEERHELWGFLLEKAYAKAHGCYENLMHGDTREALRDLTGGVSEKLQWQLGGRPG AG SAATPGQAAP QQQEIPRPR+AGWGILAGTTPPLGWVFENIR+RL+DGQVLGCSRQAW+RCPWG GDQQEAADGGMLFPPSNR
Sbjct: 1 MHSLFDFGLDGDLHLPEVTILVRTALIACAKLDSRVTTPSTEAIEGLCRTAFNQAGLDDEGALAKHLFESFVSSDSQMTAFLQLWSDSISQAAVTEGTLWEDPDFPADPSALSLVAGTVPPGIPPGEAVRWLRPSEVAGGEAVLFVGDVPGDGPMVPGQLADQWLLSAIGILTGRPQLLRSLFVPTGQEALGRYCVRLFKEANWINVFVDTRIACNALGDPLFCRGEERHELWGFLLEKAYAKAHGCYENLMHGDTREALRDLTGGVSEKLQWQLGGRPGAAGASAATPGQAAPGQQQEIPRPRIAGWGILAGTTPPLGWVFENIRNRLSDGQVLGCSRQAWVRCPWGIGDQQEAADGGMLFPPSNR 367
BLAST of mRNA_Ecto-sp13_S_contig13448.2749.1 vs. uniprot
Match: A0A6H5K875_9PHAE (Calpain catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K875_9PHAE) HSP 1 Score: 473 bits (1218), Expect = 4.750e-159 Identity = 247/342 (72.22%), Postives = 250/342 (73.10%), Query Frame = 1
Query: 232 MTAFLQLWSDSISQAAVSEGTLWEDPDFPADA-------------------------------SALSLVAGTVPPGIPPGEAVRWLRPSEVAGGEAVLFVGDVPGDGPMVPGQLADQWLLSAIGLLTGRPHLLRSLFVPTGQEALGRYCVRLFKEANWINVFVDTCIACNAFGD---------------------------------------------------PLFCRGEERHELWGFLLEKAYAKAHGCYENLMHGDTREALRDLTGGVSEKLQWQLGGRPGTAGGSAATPGQAAPEQQQEIPRPRVAGWGILAGTTPPLGWVFENIRDRLADGQVLGC 1011
MTAFLQLWSDSISQAAVSEGTLWEDPDFP D SALSLVAGTVPPGIPPGEAVRWLRPSEVAGGEAVLFVGDVPGDGPMVPGQ WLLSAIG+LTGRPHLLRSLFVPTGQEALGRYCVRLFKEANWINVFVDTCIACNA GD PLFCRGEERHELWGFLLEKAYAKAHGCYENLMHGDTREALRDLTGGVSEKLQWQL GRPG AG SAATPGQAAPEQQ+EIPRPRVAGWGILAGTTPPLGWVFENIRDRL+DGQVLGC
Sbjct: 1 MTAFLQLWSDSISQAAVSEGTLWEDPDFPGDPRYLREHMLVFSCLTPSSETIPTYQKLSWGYRSALSLVAGTVPPGIPPGEAVRWLRPSEVAGGEAVLFVGDVPGDGPMVPGQ----WLLSAIGILTGRPHLLRSLFVPTGQEALGRYCVRLFKEANWINVFVDTCIACNALGDVRDHDGTRGHRSFAGPAVSARHLDEPRMFNPGHIHARSWIRPPAKEKPLAEPLFCRGEERHELWGFLLEKAYAKAHGCYENLMHGDTREALRDLTGGVSEKLQWQLSGRPGAAGVSAATPGQAAPEQQREIPRPRVAGWGILAGTTPPLGWVFENIRDRLSDGQVLGC 338
BLAST of mRNA_Ecto-sp13_S_contig13448.2749.1 vs. uniprot
Match: A0A482SQB1_9ARCH (Calpain catalytic domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SQB1_9ARCH) HSP 1 Score: 140 bits (353), Expect = 1.390e-33 Identity = 99/290 (34.14%), Postives = 141/290 (48.62%), Query Frame = 1
Query: 7 SLFDFGLDGDLHLPEITILVRTALIACAKLDSRVKTPSTEAIEGLCQMAFNQAGLDDEGALAKHLFESFVSSDAQMTAFLQLWSDSISQAAVSEGTLWEDPDFPADASALSLVAGTVPPGIPPGEAVRWLRPSEVAGGE----AVLFV----------------GD-VPGDGPMVPGQLADQWLLSAIGLLTGRPHLLRSLFVPTGQEALGRYCVRLFKEANWINVFVDTCIACNAFGDPLFCRGEERHELWGFLLEKAYAKAHGCYENLMHGDTRE-----ALRDLTGG 798
SLF+F G L+ E+T+L+ K+D + PS I LC+ AF A L L K +FVS + +TAFL+ W +Q + G W D FP + +++ + G+P + + W R V G E A LF+ G+ V G G + G LAD+ LL+A+ +LT RP ++++LF TGQE +GR+CVRL++ +W +V+VD + C P F E W LLEKA AK G Y + TR LR LTGG
Sbjct: 107 SLFNFNDKGYLNDSELTLLMMAVTRGAYKIDQKFFPPSVRVIHTLCKEAFKFA-LRKRDELRKPELVNFVSKNVDVTAFLECWRGHAAQVLLPPGLKWRDLTFPCNEMSIAPSPAWLRYGLPTKDFILWRRRDRV-GAELNSLAFLFIHTETFLKTVDRKDVFCGEGVLGTGYIKQGVLADRHLLNALAILTSRPKMIQALFAGTGQEEVGRFCVRLYEAGSWRSVYVDDRVPCAPNLYPAFSTSSSPLEAWVVLLEKAVAKYMGSYGAIAASATRSDGTLTMLRYLTGG 394
BLAST of mRNA_Ecto-sp13_S_contig13448.2749.1 vs. uniprot
Match: A0A6S9I198_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9I198_HETAK) HSP 1 Score: 134 bits (337), Expect = 4.220e-31 Identity = 92/266 (34.59%), Postives = 129/266 (48.50%), Query Frame = 1
Query: 289 GTLWEDPDFPADASALSLVAGTVPPGIPPGEAVRWLRPS--EVAGGEA--VLFVGDVPGDGPMVPGQLADQWLLSAIGLLTGRPHLLRSLFVPTGQEALGRYCVRLFKEANWINVFVDTCIACNAFGDPLFCRGEERHELWGFLLEKAYAKAHGCYENLMHGDTREALRDLTGGVSEKLQWQLGGRPGTAGGSAATPGQAAPEQQQEIPRPRVAGWGILAGTTPPLGWVFENIRDRLADGQVLGCSRQAWLRCPWGGGDQQEAADG 1074
G LW D DF D S+L G P +AV W R + EVAG +A G PGD +V G L + W +SA+ +L R LLR++ V A G Y ++ FK W+ V VD + CN G LF G++ +E+W ++EKAYAK HGCYENL G E LRDLTG K+++ G +Q Q+ G +F+ +++ +A+G ++GCSRQA G G +Q+ G
Sbjct: 36 GQLWSDKDFLPDGSSLYRDPHKPFRGGMPADAVEWNRINSLEVAGCDAPKTFLDGTEPGD--VVQGALGNCWFVSALSVLASRQMLLRNVIVSDKNAARGIYTLKFFKGGKWVYVHVDDKLPCNRAGKVLFGHGQDPNEVWVSVIEKAYAKLHGCYENLTTGFIDEGLRDLTGVCCMKIKFNSKG---------------VVKQIQD-------------------GSLFQELKEWMAEGSLMGCSRQAGA----GAGTEQDTGRG 261
BLAST of mRNA_Ecto-sp13_S_contig13448.2749.1 vs. uniprot
Match: L1J0U9_GUITC (Uncharacterized protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1J0U9_GUITC) HSP 1 Score: 132 bits (333), Expect = 3.330e-30 Identity = 76/178 (42.70%), Postives = 101/178 (56.74%), Query Frame = 1
Query: 286 EGTLWEDPDFPADASALSLVAGTVPPGIPPGEAVRWLRPSE-VAGGEAVLFVGDVPGDGPMVPGQLADQWLLSAIGLLTGRPHLLRSLFVPTGQ-EALGRYCVRLFKEANWINVFVDTCIACNAFGDPLFCRGEERHELWGFLLEKAYAKAHGCYENLMHGDTREALRDLTGGVSEKL 813
EG + DPDFPA AS+L + P +AV+W+RP + V+ G AV+F G+ P+V G L + W + A+G L GR LL L T A G Y VR +K W NV +D I C+ PL+ R + ++W LLEKAYAK HGCYE L+ G ALRDLTGG ++ +
Sbjct: 191 EGGKFVDPDFPAAASSLFMDPRKPSRHHIPHDAVKWIRPHQIVSSGGAVVF-GEAA---PLVEGSLGNGWFVGALGCLVGRRDLLEVLIPSTENGRAYGIYTVRYYKYGQWHNVVIDDRIPCDQVNVPLYTRSSDPQQIWPMLLEKAYAKMHGCYEALVTGSVTYALRDLTGGAAQAI 364
BLAST of mRNA_Ecto-sp13_S_contig13448.2749.1 vs. uniprot
Match: A0A7S3DFV8_9EUKA (Hypothetical protein n=7 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3DFV8_9EUKA) HSP 1 Score: 119 bits (298), Expect = 1.130e-25 Identity = 67/176 (38.07%), Postives = 90/176 (51.14%), Query Frame = 1
Query: 289 GTLWEDPDFPADASALSLVAGTVPPGIPPGEAVRWLRPSEVAGGEAVLFVGDVPGDGPMVPGQLADQWLLSAIGLLTGRPHLLRSLFVPTGQEALGRYCVRLFKEANWINVFVDTCIACNAFGDPLFCRGEERHELWGFLLEKAYAKAHGCYENLMHGDTREALRDLTGGVSEKLQ 816
G + DP+FPAD + L G P + + R SE+ + P D +V G+L D W L A+ + LR+LFV T G Y V+ FK +WI +D I C+ G PL+ R + +E W LLEKAYAK HGCYENL+ G A RDLTGG + ++
Sbjct: 24 GAHFTDPEFPADETCLFRDPSHPTSGHVPMAYIMFRRVSEICKHPKLFSHDASPMD--IVQGRLDDAWFLGALATVATNKEQLRNLFVSTKYAKYGVYTVKFFKSGSWIQFVIDDLIPCDPAGRPLYSRCKNANETWVMLLEKAYAKLHGCYENLLGGRMPYAFRDLTGGAPQTIK 197
BLAST of mRNA_Ecto-sp13_S_contig13448.2749.1 vs. uniprot
Match: A0A7S0HLP1_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0HLP1_9CRYP) HSP 1 Score: 118 bits (296), Expect = 1.500e-25 Identity = 72/191 (37.70%), Postives = 103/191 (53.93%), Query Frame = 1
Query: 286 EGTLWEDPDFPADASALSLVAGTVPPGIPPGEAVRWLRPSEVAGGEAVLFVG-DVPGDGP-----MVP----GQLADQWLLSAIGLLTGRPHLLRSLFV---PTGQEALGRYCVRLFKEANWINVFVDTCIACNAFGDPLFCRGEERHELWGFLLEKAYAKAHGCYENLMHGDTREALRDLTGGVSEKLQW 819
E +++ DP P+ A L+ + + + +RWLRPS+++ + +G + P P M P G L D W + A+ LL RP L+R LFV E G Y VR +K W+N+ VD + G+ LF R ++ ELW +LEKAYAK HGCYE L G + AL+DLTGGV +KL++
Sbjct: 67 ELSIFSDPSNPSAAVQLAALDDKI-------QNIRWLRPSQISYDSLDVKIGAERPKLYPKESQAMFPYVAMGALGDSWFVGALALLASRPELVRQLFVGYTSPSCENCGIYTVRFYKNGKWVNITVDDRLPATLQGNFLFSRSQKGTELWLPVLEKAYAKLHGCYELLFQGSVQYALKDLTGGVPQKLKF 250
BLAST of mRNA_Ecto-sp13_S_contig13448.2749.1 vs. uniprot
Match: A0A7S3D4H1_9EUKA (Hypothetical protein n=2 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3D4H1_9EUKA) HSP 1 Score: 117 bits (293), Expect = 4.710e-25 Identity = 71/189 (37.57%), Postives = 101/189 (53.44%), Query Frame = 1
Query: 259 DSISQAAVSEGTLWEDPDFPADASALSLVAGTVPPGIPPGEAVRWLRPSEVAGGEAVLFVGDV-PGDGPMVPGQLADQWLLSAIGLLTGRPHLLRSLFVPTGQ--EALGRYCVRLFKEANWINVFVDTCIACNAFGDPLFCRGEERHELWGFLLEKAYAKAHGCYENLMHGDTREALRDLTGGVSEKLQ 816
+SI + ++ +EDP FPADAS+L A P P E V+WLRP E E LFV V PGD ++ G L D W L A+ + + L++LF + + G +R +K W V +D I C PL+ R ++ +E+W L+EKAYAK H YE L+ G L+DLTGGV + ++
Sbjct: 300 ESIIEMCKAKRCKYEDPHFPADASSLFREADKKPSWHMPPERVKWLRPEEFCPEEPKLFVEGVEPGD--VIQGALGDCWFLGALSTVATKQEKLQNLFTNAAKYRKDYGVVTLRFYKNGKWKEVVIDDRIPCMN-NKPLYARCKDPNEIWVLLVEKAYAKLHHSYEQLVAGSLSYGLKDLTGGVPQVIK 485
BLAST of mRNA_Ecto-sp13_S_contig13448.2749.1 vs. uniprot
Match: A0A7S3SLM7_EMIHU (Hypothetical protein (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3SLM7_EMIHU) HSP 1 Score: 111 bits (277), Expect = 7.300e-25 Identity = 69/174 (39.66%), Postives = 91/174 (52.30%), Query Frame = 1
Query: 304 DPDFPADASALSLVAGTVPPGIPPGEAVRWLRPSEV---AGGEAVLFVGDVPGDGPMVPGQLADQWLLSAIGLLTGRPHLLRSLFVPTGQE--ALGRYCVRLFKEANWINVFVDTCIACNAFGDPLFCRGEERHELWGFLLEKAYAKAHGCYENLMHGDTREALRDLTGGVSEK 810
D DF A AL L + PPG PP E VRWLRP+EV AG A D +V G+L D W LSA+ ++ +P LL LF + GR + + W V +D + C+A G L+ R HE+W L+EKA+AK HG YE L+ G A+R LTGG ++
Sbjct: 32 DEDF-CGARALYLDPASPPPGQPPPETVRWLRPAEVCAEAGWPAPALFVDSSSSSDVVQGRLGDCWFLSALAVVALQPRLLARLFRRWDDPPASAGRCTLVFHHDGAWRPVTIDDRLPCDADGQLLYARSATPHEMWVPLVEKAFAKLHGGYEALVSGFADAAMRQLTGGAPQR 204
BLAST of mRNA_Ecto-sp13_S_contig13448.2749.1 vs. uniprot
Match: R1CA79_EMIHU (Calpain catalytic domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1CA79_EMIHU) HSP 1 Score: 112 bits (280), Expect = 9.030e-25 Identity = 73/189 (38.62%), Postives = 96/189 (50.79%), Query Frame = 1
Query: 304 DPDFPADASALSLVAGTVPPGIPPGEAVRWLRPSEV---AGGEAVLFVGDVPGDGPMVPGQLADQWLLSAIGLLTGRPHLLRSLFVPTGQE--ALGRYCVRLFKEANWINVFVDTCIACNAFGDPLFCRGEERHELWGFLLEKAYAKAHGCYENLMHGDTREALRDLTGGVSEKLQWQLGGRPGTAGGS 855
D DF A AL L + PPG PP E VRWLRP+EV AG A D +V G+L D W LSA+ ++ +P LL LF + GR + + W V +D + C+A G L+ R HE+W L+EKA+AK HG YE L+ G A+R LTGG ++ RP +G S
Sbjct: 112 DHDF-CGARALYLDPASPPPGQPPPETVRWLRPAEVCAEAGWPAPALFVDSSSSSDVVQGRLGDCWFLSALAVVALQPRLLARLFRRWDDPPASAGRCTLVFHHDGAWRPVTIDDRLPCDADGQLLYARSATPHEMWVPLVEKAFAKLHGGYEALVSGFADAAMRQLTGGAPQRRLATARTRPSRSGPS 299 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13448.2749.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig13448.2749.1 >prot_Ecto-sp13_S_contig13448.2749.1 ID=prot_Ecto-sp13_S_contig13448.2749.1|Name=mRNA_Ecto-sp13_S_contig13448.2749.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=368bp MHSLFDFGLDGDLHLPEITILVRTALIACAKLDSRVKTPSTEAIEGLCQMback to top mRNA from alignment at Ecto-sp13_S_contig13448:345..4652- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig13448.2749.1 ID=mRNA_Ecto-sp13_S_contig13448.2749.1|Name=mRNA_Ecto-sp13_S_contig13448.2749.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4308bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13448:345..4652- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig13448:345..4652- >mRNA_Ecto-sp13_S_contig13448.2749.1 ID=mRNA_Ecto-sp13_S_contig13448.2749.1|Name=mRNA_Ecto-sp13_S_contig13448.2749.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1104bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13448:345..4652- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |