mRNA_Ecto-sp13_S_contig13446.2748.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig13446.2748.1
Unique NamemRNA_Ecto-sp13_S_contig13446.2748.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig13446.2748.1 vs. uniprot
Match: A0A6H5JPB9_9PHAE (ABC1 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JPB9_9PHAE)

HSP 1 Score: 385 bits (990), Expect = 9.330e-129
Identity = 184/185 (99.46%), Postives = 184/185 (99.46%), Query Frame = 1 
Query:    1 QEVRNHVARLMLRCTINELFDWRFMQTDPNWGNFLFDRETGKMSLIDFGACREYRKGFVDDYLRLVWSAANQDEAEIMRVSQELKFLTGDETQTMMKAHLQAGLVVGEPFIDRDGEAFDFHGSNITARLSQHGDTFMKHRLTPPPQEAYSLHRKLAGAFLMNIKLKAVIPCRDILEDVHDRYTYG 555
            QEVRNHVARLMLRCTINELFDWRFMQTDPNWGNFLFDRETGKMSLIDFGACREYRKGFVDDYLRLVWSAANQDEAEIMRVSQELKFLTGDETQ MMKAHLQAGLVVGEPFIDRDGEAFDFHGSNITARLSQHGDTFMKHRLTPPPQEAYSLHRKLAGAFLMNIKLKAVIPCRDILEDVHDRYTYG
Sbjct:  499 QEVRNHVARLMLRCTINELFDWRFMQTDPNWGNFLFDRETGKMSLIDFGACREYRKGFVDDYLRLVWSAANQDEAEIMRVSQELKFLTGDETQMMMKAHLQAGLVVGEPFIDRDGEAFDFHGSNITARLSQHGDTFMKHRLTPPPQEAYSLHRKLAGAFLMNIKLKAVIPCRDILEDVHDRYTYG 683
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BLAST of mRNA_Ecto-sp13_S_contig13446.2748.1 vs. uniprot
Match: A0A4D9DI78_9STRA (ABC1 domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DI78_9STRA)

HSP 1 Score: 267 bits (683), Expect = 2.190e-83
Identity = 124/183 (67.76%), Postives = 149/183 (81.42%), Query Frame = 1 
Query:    1 QEVRNHVARLMLRCTINELFDWRFMQTDPNWGNFLFDRETGKMSLIDFGACREYRKGFVDDYLRLVWSAANQDEAEIMRVSQELKFLTGDETQTMMKAHLQAGLVVGEPFIDRDGEAFDFHGSNITARLSQHGDTFMKHRLTPPPQEAYSLHRKLAGAFLMNIKLKAVIPCRDILEDVHDRYT 549
            Q+ RN VARL+L  T+ ELFDWRFMQTDPNW NFL+D  TGK++L+DFGA R Y+K FVD YL LVW+AAN+D +++M  S +L FLTGDE+  M++AH  AGLVVGEPF++   E FDFHGSN+T R+S HG TFM HRLTPPP+EAYSLHRKLAGAFL+ IKLKAVIPCRD+LE+ H  YT
Sbjct:  441 QDTRNRVARLILLLTLRELFDWRFMQTDPNWSNFLYDGSTGKLALLDFGASRSYQKAFVDKYLELVWAAANRDTSKLMIASHQLGFLTGDESTQMLRAHESAGLVVGEPFVNH--EPFDFHGSNMTVRISHHGKTFMNHRLTPPPREAYSLHRKLAGAFLLCIKLKAVIPCRDLLEETHKMYT 621
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BLAST of mRNA_Ecto-sp13_S_contig13446.2748.1 vs. uniprot
Match: A0A7S2UUH1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UUH1_9STRA)

HSP 1 Score: 242 bits (618), Expect = 5.740e-79
Identity = 116/182 (63.74%), Postives = 145/182 (79.67%), Query Frame = 1 
Query:    1 QEVRNHVARLMLRCTINELFDWRFMQTDPNWGNFLFDRETGKMSLIDFGACREYRKGFVDDYLRLVWSAANQDEAEIMRVSQELKFLTGDETQTMMKAHLQAGLVVGEPFIDRDGEAFDFHGSNITARLSQHGDTFMKHRLTPPPQEAYSLHRKLAGAFLMNIKLKAVIPCRDILEDVHDRY 546
            Q+VR+ VA  +L  T+ ELF+W FMQTDPNWGNFL++ ET  + LIDFGACR Y + FVD YL LVW+AA++D   I  +S+++ FLTGDE+  M++AH +AGLVVGEPF     E FDF+GS +T RLS+HGDTF+KHRLTPPP+EAYSLHRKLAGAFLM IKL+AVIPCR+ILE+ +  Y
Sbjct:    3 QDVRDRVASTLLVLTLRELFNWNFMQTDPNWGNFLYNPETDVVELIDFGACRAYDRQFVDGYLGLVWAAAHRDTRTIEDLSKDMGFLTGDESPQMVRAHTEAGLVVGEPFWGH--EPFDFYGSRMTERLSRHGDTFLKHRLTPPPREAYSLHRKLAGAFLMCIKLRAVIPCREILEETYRSY 182
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BLAST of mRNA_Ecto-sp13_S_contig13446.2748.1 vs. uniprot
Match: K3WV13_GLOUD (ABC1 domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WV13_GLOUD)

HSP 1 Score: 252 bits (644), Expect = 2.050e-77
Identity = 119/183 (65.03%), Postives = 141/183 (77.05%), Query Frame = 1 
Query:    1 QEVRNHVARLMLRCTINELFDWRFMQTDPNWGNFLFDRETGKMSLIDFGACREYRKGFVDDYLRLVWSAANQDEAEIMRVSQELKFLTGDETQTMMKAHLQAGLVVGEPFIDRDGEAFDFHGSNITARLSQHGDTFMKHRLTPPPQEAYSLHRKLAGAFLMNIKLKAVIPCRDILEDVHDRYT 549
            Q VRN +AR +L  TI ELFDWRFMQTDPNW NF+++  T K+ L+DFGA REY K FVD Y  +VW AAN+DE  +M  S +LKFLTGDE+  MM+AH+ AG+VVGEPF     E FDFH S +T RL+QH +TFM  RLTPPPQEAYSLHRKLAGAFLM IKL+AV+PCRD+LE VH +Y 
Sbjct:  463 QNVRNSIARRILELTIRELFDWRFMQTDPNWSNFMYNSATDKIGLVDFGAAREYDKSFVDPYFNIVWGAANRDEELMMEYSLKLKFLTGDESPAMMRAHMAAGMVVGEPFCTH--EPFDFHASELTKRLAQHTETFMHGRLTPPPQEAYSLHRKLAGAFLMCIKLRAVVPCRDVLEAVHAKYV 643
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BLAST of mRNA_Ecto-sp13_S_contig13446.2748.1 vs. uniprot
Match: A0A7S1XJ41_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XJ41_9STRA)

HSP 1 Score: 239 bits (611), Expect = 3.450e-77
Identity = 115/186 (61.83%), Postives = 142/186 (76.34%), Query Frame = 1 
Query:    1 QEVRNHVARLMLRCTINELFDWRFMQTDPNWGNFLFDRE----TGKMSLIDFGACREYRKGFVDDYLRLVWSAANQDEAEIMRVSQELKFLTGDETQTMMKAHLQAGLVVGEPFIDRDGEAFDFHGSNITARLSQHGDTFMKHRLTPPPQEAYSLHRKLAGAFLMNIKLKAVIPCRDILEDVHDRY 546
            QE R+ +AR  L  T+ ELF+WRFMQTDPNWGN+L+D E     G + LIDFGA R+Y K FVD Y  LVWSAAN D+  ++ VS+ + FLTGDE+  M++AH+ AGLVVGEPF     + FDFHGS ITAR++ + +TF KHRLTPPP+EAYSLHRKLAGAFLM IKL+AV PCRD+LEDV+  +
Sbjct:   39 QERRDEIARFQLEITMRELFEWRFMQTDPNWGNYLYDPEGAGGAGVLHLIDFGAARDYPKNFVDGYAELVWSAANGDKETMVEVSKAMGFLTGDESPAMIEAHINAGLVVGEPFFT--SKPFDFHGSGITARIAAYSETFAKHRLTPPPREAYSLHRKLAGAFLMCIKLQAVFPCRDVLEDVYTSF 222
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BLAST of mRNA_Ecto-sp13_S_contig13446.2748.1 vs. uniprot
Match: A0A1V9Z8E2_9STRA (ABC1 domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z8E2_9STRA)

HSP 1 Score: 247 bits (630), Expect = 4.260e-76
Identity = 119/184 (64.67%), Postives = 143/184 (77.72%), Query Frame = 1 
Query:    1 QEVRNHVARLMLRCTINELFDWRFMQTDPNWGNFLFDRETGKMSLIDFGACREYRKGFVDDYLRLVWSAANQDEAEIMRVSQELKFLTGDETQTMMKAHLQAGLVVGEPFIDRDGEAFDFHGSNITARLSQHGDTFMKHRLTPPPQEAYSLHRKLAGAFLMNIKLKAVIPCRDILEDVHDRYTY 552
            QEVRN VAR +L+ T++ELF WRFMQTDPNW NF++D    K+ L+DFGA R Y K FVD Y  +VW AAN D A++M  S +L FLTGDE++ M+KAH QAG+VVGEPF     E +DFH S++T RL+QH D FMK RLTPPPQE YSLHRKLAGAFLM IKLKAVIPCRD+LE+V  +YT+
Sbjct:  389 QEVRNDVARKLLQLTMHELFVWRFMQTDPNWSNFMYDTTQHKIGLVDFGAARPYDKAFVDTYFDIVWGAANMDPAKMMDASFKLGFLTGDESKDMLKAHEQAGMVVGEPFASH--EPYDFHNSHLTQRLAQHTDMFMKGRLTPPPQEVYSLHRKLAGAFLMCIKLKAVIPCRDVLEEVAKQYTH 570
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BLAST of mRNA_Ecto-sp13_S_contig13446.2748.1 vs. uniprot
Match: A0A2D4BCP6_PYTIN (Atypical/ABC1/ABC1-A protein kinase n=3 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BCP6_PYTIN)

HSP 1 Score: 244 bits (623), Expect = 2.070e-74
Identity = 113/182 (62.09%), Postives = 141/182 (77.47%), Query Frame = 1 
Query:    1 QEVRNHVARLMLRCTINELFDWRFMQTDPNWGNFLFDRETGKMSLIDFGACREYRKGFVDDYLRLVWSAANQDEAEIMRVSQELKFLTGDETQTMMKAHLQAGLVVGEPFIDRDGEAFDFHGSNITARLSQHGDTFMKHRLTPPPQEAYSLHRKLAGAFLMNIKLKAVIPCRDILEDVHDRY 546
            Q VR+ +AR +L  T+ ELF+WRFMQTDPNW NF+++  T K+ L+DFGA REY K FVDDY  +VW+AAN+DE  +M  S  +KFLTGDE+  MM+AH+ AG+VVGEPF  R  E FDFH S +T RL+Q+ +TFM  RLTPPP E YSLHRKLAGAFLM IKL+A +PCRD+LE+VH +Y
Sbjct:  452 QPVRDSIARRILELTVRELFEWRFMQTDPNWSNFMYNSSTDKIGLVDFGAAREYPKEFVDDYFNIVWAAANEDEKTMMDYSIRMKFLTGDESPAMMRAHMMAGMVVGEPF--RTHEPFDFHASQLTKRLAQYTETFMHSRLTPPPPEVYSLHRKLAGAFLMCIKLRARVPCRDVLEEVHAKY 631
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BLAST of mRNA_Ecto-sp13_S_contig13446.2748.1 vs. uniprot
Match: A0A3M6VPM4_9STRA (ABC1 domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VPM4_9STRA)

HSP 1 Score: 242 bits (617), Expect = 4.670e-74
Identity = 114/182 (62.64%), Postives = 141/182 (77.47%), Query Frame = 1 
Query:    1 QEVRNHVARLMLRCTINELFDWRFMQTDPNWGNFLFDRETGKMSLIDFGACREYRKGFVDDYLRLVWSAANQDEAEIMRVSQELKFLTGDETQTMMKAHLQAGLVVGEPFIDRDGEAFDFHGSNITARLSQHGDTFMKHRLTPPPQEAYSLHRKLAGAFLMNIKLKAVIPCRDILEDVHDRY 546
            Q+VRN + R +L  TI+ELF+WRFMQTDPNW NF+++  T K+ L+DFGA REY K FVD+Y  +VW+AAN+DE  ++  S +L FLTGDE+  MM+AH+ AG+VVGEPF  R  E FDF  S +T RL QH + FM  RLTPPPQEAYSLHRKLAGAFLM IKL+AVIPCR +LEDVH ++
Sbjct:  400 QDVRNSIGRRLLELTIHELFNWRFMQTDPNWSNFMYNASTDKIGLVDFGAAREYPKSFVDEYFNVVWAAANEDEKTMIDSSIKLHFLTGDESPAMMRAHIAAGMVVGEPF--RSHEPFDFQKSQLTTRLGQHTEAFMHGRLTPPPQEAYSLHRKLAGAFLMCIKLRAVIPCRGVLEDVHRQH 579
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BLAST of mRNA_Ecto-sp13_S_contig13446.2748.1 vs. uniprot
Match: A0A662XG01_9STRA (ABC1 domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XG01_9STRA)

HSP 1 Score: 242 bits (617), Expect = 5.210e-74
Identity = 113/182 (62.09%), Postives = 139/182 (76.37%), Query Frame = 1 
Query:    1 QEVRNHVARLMLRCTINELFDWRFMQTDPNWGNFLFDRETGKMSLIDFGACREYRKGFVDDYLRLVWSAANQDEAEIMRVSQELKFLTGDETQTMMKAHLQAGLVVGEPFIDRDGEAFDFHGSNITARLSQHGDTFMKHRLTPPPQEAYSLHRKLAGAFLMNIKLKAVIPCRDILEDVHDRY 546
            Q+VRN +AR +L+ TI ELFDWRFMQTDPNW NF+++  T  + L+DFGA REY K FVDDY  +VW+AAN DE  +M  S +L FLTGDE+  MM+AH+ AG+VVGEPF  R  E FDF+ S +T RL +H + FM  RLTPPPQE YSLHRKLAGAFL+ IKL+AV+PCRD+LE+V   Y
Sbjct:  405 QDVRNGIARRILQLTIRELFDWRFMQTDPNWSNFMYNASTDTIGLVDFGAAREYPKEFVDDYFNVVWAAANNDEKTLMDASLKLHFLTGDESPAMMRAHMAAGMVVGEPF--RSNEPFDFYASKLTTRLGKHTEVFMHGRLTPPPQEVYSLHRKLAGAFLICIKLRAVVPCRDVLEEVQRTY 584
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BLAST of mRNA_Ecto-sp13_S_contig13446.2748.1 vs. uniprot
Match: A0A067CE53_SAPPC (Atypical/ABC1/ABC1-A protein kinase n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CE53_SAPPC)

HSP 1 Score: 241 bits (615), Expect = 1.130e-73
Identity = 116/182 (63.74%), Postives = 141/182 (77.47%), Query Frame = 1 
Query:    1 QEVRNHVARLMLRCTINELFDWRFMQTDPNWGNFLFDRETGKMSLIDFGACREYRKGFVDDYLRLVWSAANQDEAEIMRVSQELKFLTGDETQTMMKAHLQAGLVVGEPFIDRDGEAFDFHGSNITARLSQHGDTFMKHRLTPPPQEAYSLHRKLAGAFLMNIKLKAVIPCRDILEDVHDRY 546
            QEVRN VAR +L+ T++ELF WRFMQTDPNW NF++D +  K+ LIDFGA R Y K FVD Y  +VW AAN D  ++M  S +L FLTGDE++ M+KAH QAG+VVGEPF     E +DF+ S++T RL+QH D FMK RLTPPP+E YSLHRKLAGAFLM IKLKAVIPCRD+LE+V  +Y
Sbjct:  409 QEVRNDVARKLLQLTMHELFVWRFMQTDPNWSNFMYDAQQHKIGLIDFGAARPYEKSFVDTYFDIVWGAANMDPKKMMNASFKLGFLTGDESKDMLKAHEQAGMVVGEPFASH--EPYDFYNSHLTQRLAQHTDMFMKGRLTPPPREVYSLHRKLAGAFLMCIKLKAVIPCRDVLEEVAKQY 588
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13446.2748.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JPB9_9PHAE9.330e-12999.46ABC1 domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A4D9DI78_9STRA2.190e-8367.76ABC1 domain-containing protein n=2 Tax=Monodopsida... [more]
A0A7S2UUH1_9STRA5.740e-7963.74Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
K3WV13_GLOUD2.050e-7765.03ABC1 domain-containing protein n=1 Tax=Globisporan... [more]
A0A7S1XJ41_9STRA3.450e-7761.83Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A1V9Z8E2_9STRA4.260e-7664.67ABC1 domain-containing protein n=1 Tax=Achlya hypo... [more]
A0A2D4BCP6_PYTIN2.070e-7462.09Atypical/ABC1/ABC1-A protein kinase n=3 Tax=Pythiu... [more]
A0A3M6VPM4_9STRA4.670e-7462.64ABC1 domain-containing protein n=1 Tax=Peronospora... [more]
A0A662XG01_9STRA5.210e-7462.09ABC1 domain-containing protein n=1 Tax=Nothophytop... [more]
A0A067CE53_SAPPC1.130e-7363.74Atypical/ABC1/ABC1-A protein kinase n=2 Tax=Saprol... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13446contigEcto-sp13_S_contig13446:2144..4507 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score368.2
Seed ortholog evalue2.1e-99
Seed eggNOG ortholog2880.D8LRI9
Preferred nameADCK3
Model size558
KEGG koko:K08869
Hectar predicted targeting categoryother localisation
GOsGO:0000166,GO:0001655,GO:0001822,GO:0002064,GO:0003674,GO:0003824,GO:0004672,GO:0005215,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005759,GO:0006091,GO:0006119,GO:0006122,GO:0006139,GO:0006163,GO:0006464,GO:0006468,GO:0006725,GO:0006732,GO:0006733,GO:0006743,GO:0006744,GO:0006753,GO:0006778,GO:0006787,GO:0006793,GO:0006796,GO:0006807,GO:0007275,GO:0007399,GO:0007417,GO:0007420,GO:0008150,GO:0008152,GO:0008289,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009653,GO:0009888,GO:0009987,GO:0010224,GO:0015980,GO:0015994,GO:0015996,GO:0016020,GO:0016043,GO:0016301,GO:0016310,GO:0016462,GO:0016740,GO:0016772,GO:0016773,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0017144,GO:0019439,GO:0019538,GO:0019637,GO:0019693,GO:0019866,GO:0019898,GO:0021549,GO:0021575,GO:0021587,GO:0021680,GO:0021692,GO:0021695,GO:0021696,GO:0022037,GO:0022900,GO:0022904,GO:0030154,GO:0030198,GO:0030554,GO:0030855,GO:0030902,GO:0031090,GO:0031312,GO:0031314,GO:0031966,GO:0031967,GO:0031974,GO:0031975,GO:0032194,GO:0032501,GO:0032502,GO:0032553,GO:0032555,GO:0032559,GO:0032835,GO:0032836,GO:0033013,GO:0033015,GO:0034641,GO:0035850,GO:0036094,GO:0036211,GO:0042180,GO:0042181,GO:0042440,GO:0042773,GO:0042775,GO:0043062,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043531,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044267,GO:0044270,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0045333,GO:0046034,GO:0046149,GO:0046483,GO:0046700,GO:0046777,GO:0048468,GO:0048513,GO:0048731,GO:0048856,GO:0048869,GO:0050896,GO:0051186,GO:0051187,GO:0051188,GO:0055086,GO:0055114,GO:0060322,GO:0060429,GO:0061005,GO:0061318,GO:0070013,GO:0071704,GO:0071840,GO:0072001,GO:0072006,GO:0072009,GO:0072010,GO:0072015,GO:0072073,GO:0072112,GO:0072310,GO:0072311,GO:0072521,GO:0097159,GO:0097367,GO:0140096,GO:1901004,GO:1901006,GO:1901135,GO:1901265,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1901661,GO:1901663
Exons5
EggNOG free text desc.ubiquinone biosynthetic process
EggNOG OGsCOG0661@1,KOG1234@2759
Cds size528
COG Functional cat.Z
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01001
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13446.2748.1prot_Ecto-sp13_S_contig13446.2748.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig13446 2144..4477 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462718.1735158-CDS-Ecto-sp13_S_contig13446:2143..22821681462718.1735158-CDS-Ecto-sp13_S_contig13446:2143..2282Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13446 2144..2282 -
1681462718.1843305-CDS-Ecto-sp13_S_contig13446:2710..27911681462718.1843305-CDS-Ecto-sp13_S_contig13446:2710..2791Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13446 2711..2791 -
1681462718.1932106-CDS-Ecto-sp13_S_contig13446:3004..31051681462718.1932106-CDS-Ecto-sp13_S_contig13446:3004..3105Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13446 3005..3105 -
1681462718.202386-CDS-Ecto-sp13_S_contig13446:3731..38471681462718.202386-CDS-Ecto-sp13_S_contig13446:3731..3847Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13446 3732..3847 -
1681462718.212639-CDS-Ecto-sp13_S_contig13446:4386..44771681462718.212639-CDS-Ecto-sp13_S_contig13446:4386..4477Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13446 4387..4477 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462718.2214375-UTR-Ecto-sp13_S_contig13446:4477..45071681462718.2214375-UTR-Ecto-sp13_S_contig13446:4477..4507Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig13446 4478..4507 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig13446.2748.1

>prot_Ecto-sp13_S_contig13446.2748.1 ID=prot_Ecto-sp13_S_contig13446.2748.1|Name=mRNA_Ecto-sp13_S_contig13446.2748.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=176bp
MLRCTINELFDWRFMQTDPNWGNFLFDRETGKMSLIDFGACREYRKGFVD
DYLRLVWSAANQDEAEIMRVSQELKFLTGDETQTMMKAHLQAGLVVGEPF
IDRDGEAFDFHGSNITARLSQHGDTFMKHRLTPPPQEAYSLHRKLAGAFL
MNIKLKAVIPCRDILEDVHDRYTYG*
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mRNA from alignment at Ecto-sp13_S_contig13446:2144..4507-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig13446.2748.1 ID=mRNA_Ecto-sp13_S_contig13446.2748.1|Name=mRNA_Ecto-sp13_S_contig13446.2748.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2364bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13446:2144..4507- (Ectocarpus species13 EcNAP12_S_4_19m)
CAGGAAGTCCGAAACCACGTTGCGAGGCTCATGCTACGCTGCACGATTAA
CGAGCTGTTTGACTGGCGCTTCATGCAGACGGACCCCAACTGGGGAAACT
TCCTGTTTGATCGCGAGACAGGTCAGTGTTGCCTGAAATCGCGGCGGCTG
TTCTTGTTTATGCTCTCACCCGTACCCCTGCTACCGCAAGAGTGAGAATC
GTCTTACATATCCTAGACCAAGTTTCAATGCTCCACAGCTAAGAGGCTGT
CCAGGCCGCCAGAGGTAATGTTGGAAGTATCTCATCTTTTGGACCTCTAC
TGGCGGGCCATCGATGCAGCGGAGCATATGTTGTAGCCTAATGATGTGAA
AATATTGTTGTGACATGGTTTTGTTTCACACATTTTCCTTAGCTTCATAT
TGATACCCGGTGTTTTCTCCTTCGTTGGAAAATTTCCTTTACGAAGGAGC
GCGATGTTACCGCATTGAATTTTTTTAAGCGCTCGAGACAGATTTGCAAT
CATGAGTCTCGAGGCCGTGTATATGCACCATGCGTGTCTATACCGTGCGT
TTGCGCACGCCGCAGCTCTGATGTCAATACGTCCCGACTACCGAAAACTG
AATTTTGTTGGGCATTGGCAACACCTCTCGATCTAACTTACGCGTTGCGT
CATTCCTCAGGCAAGATGAGTCTGATCGACTTCGGAGCATGCCGAGAGTA
CCGAAAAGGTTTCGTTGACGACTACCTTCGCTTGGTGTGGTCTGCCGCAA
ACCAAGACGAAGCGGAGATAATGCGGGTGGGTAATTTTGGTGCCCGATCC
GTTTTCACAGCGACTGCTACGCTGCTCCGCTCGAAGTGCGACTTGACTTG
GGTTTGAGAAGCATGCGGAGCTGGTATTCGGCTTCAGTGAAAAGATAGCA
ATGGGATTCTGCGGTCCTCATTTGAAAGGAAAACCGTACGGCATTGCAAT
GAGCATGGCAGCTATTCGTCATCGATGAGCTCGAGTGTGTCGTAGGGGTT
GGTTTAGTGCCTCAGTGGATACGACATGGGATTGCACTTTTTTTTTCATT
CGGCGTTAGTATAGCGCGGGCAAGAAGGGCATGGAGACCTGCCGACGCTT
GCGTGTTTTGTCGCGCATAACACTATCTTGTGTTGCCGCTTTCACTATCT
CTTGGTCAAAATCAACAAGCTGTTTTTCCTGGGACGTGAAAATTGGCACG
TTGTCCCTTGTCGAATGCTTGAAGGTAGGGTTTCACAATTGAAAACTTTC
TGCAGCAATCGAGACGAAAAACATGTGTGAGAGTAGTGATGAACAGAATC
ACTAGACATGGCTCTCCAGATGTGTACGTCTTCGACATTTATATTTTCGC
GAGAGTGGAACGCTCATATTCGATGCTGGGTTGGGCGCATTCTACTCTGC
AGGTAAGCCAGGAGCTCAAGTTCCTGACGGGAGACGAGACACAGACGATG
ATGAAGGCCCACTTGCAGGCAGGCCTGGTCGTCGGGGAACCTTTCATAGA
CAGGTGCGAATGGAGGCCATCACTCAACCATGTTGTGAAGATGCCTGAAA
TAGTACATTGCATTTCGTGTGTCATGAAAGTCCCTCTCCCCCCCCCGAAC
TTTGCTTTCGACGGCGTGTGGTATCCTGCCCGTTTTTATTTAGGCTGACG
TTTTCAGCTTGGTTTGTTTTCCGCACACTGCCTCTGCTTGTTCGGTGCCG
CCCTTACCCGGTGCAGAGACGGGGAGGCTTTCGACTTCCACGGAAGCAAC
ATTACGGCACGACTGAGCCAACACGGAGACACCTTCATGAAGCACAGGTG
ATAAGGGTTGGCCAAGCCTTGTGCCCTAACAATTCGTTGTGGGAAGTTGT
GCGGGGCGGGTCACAGCCTTGGTGGTAGTGCCAGATGTATGTCAAGGTCT
GGTCCTGTGCGCTCTCATTGGGTATGCATAGGTTTGGGGCGGTGGTGTCT
TGAAGCTGGTGTCGGTGTGCTTTGTGCGCATTGTTCCATGCTGTTGCGTT
GTGCATGCCGGTGTTCTCAACAAGTCTTTCCATGCCCTCATCCAAGTCGC
CCCGCTAGAGTACCTTGGGAGTTCCGGTGTCCCGTCTAGAGGCATGCGGT
GGGGCTGATGTTGGAAGCCACGGGGCGCCCTCAAATCCACAGAAAAACCA
GCGTGCACATATGTCCTCGCAGCAGGTTCGCTGGTTTTTCGTGACCTTTG
CTTCCGGAAATTGTTCGCACGACAGGTTGACGCCGCCTCCACAGGAAGCC
TACAGCCTCCACAGGAAGCTAGCGGGGGCGTTCCTAATGAACATCAAGCT
CAAGGCAGTGATCCCCTGCAGAGACATCCTAGAGGATGTTCATGACCGGT
ATACTTACGGTTGA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig13446:2144..4507-

>mRNA_Ecto-sp13_S_contig13446.2748.1 ID=mRNA_Ecto-sp13_S_contig13446.2748.1|Name=mRNA_Ecto-sp13_S_contig13446.2748.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=528bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13446:2144..4507- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCTACGCTGCACGATTAACGAGCTGTTTGACTGGCGCTTCATGCAGAC
GGACCCCAACTGGGGAAACTTCCTGTTTGATCGCGAGACAGGCAAGATGA
GTCTGATCGACTTCGGAGCATGCCGAGAGTACCGAAAAGGTTTCGTTGAC
GACTACCTTCGCTTGGTGTGGTCTGCCGCAAACCAAGACGAAGCGGAGAT
AATGCGGGTAAGCCAGGAGCTCAAGTTCCTGACGGGAGACGAGACACAGA
CGATGATGAAGGCCCACTTGCAGGCAGGCCTGGTCGTCGGGGAACCTTTC
ATAGACAGAGACGGGGAGGCTTTCGACTTCCACGGAAGCAACATTACGGC
ACGACTGAGCCAACACGGAGACACCTTCATGAAGCACAGGTTGACGCCGC
CTCCACAGGAAGCCTACAGCCTCCACAGGAAGCTAGCGGGGGCGTTCCTA
ATGAACATCAAGCTCAAGGCAGTGATCCCCTGCAGAGACATCCTAGAGGA
TGTTCATGACCGGTATACTTACGGTTGA
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