mRNA_Ecto-sp13_S_contig13414.2731.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig13414.2731.1 vs. uniprot
Match: A0A6H5JYD1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYD1_9PHAE) HSP 1 Score: 120 bits (301), Expect = 1.090e-29 Identity = 61/70 (87.14%), Postives = 65/70 (92.86%), Query Frame = 1
Query: 64 RDPVETIVRKLADPDERKSAGTAPSKVEMYRGITVEELSAKWLEAILQLEKTEITVANAEHALEGALSIR 273
RDPVE IVRKLA PDER++A TAPSKVEMYRGITVEEL AKWLEA+L+LEK EITVANAEHALEGALSIR
Sbjct: 19 RDPVEEIVRKLAGPDEREAARTAPSKVEMYRGITVEELGAKWLEAVLELEKREITVANAEHALEGALSIR 88
BLAST of mRNA_Ecto-sp13_S_contig13414.2731.1 vs. uniprot
Match: A0A6H5KHF4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHF4_9PHAE) HSP 1 Score: 115 bits (288), Expect = 5.000e-29 Identity = 58/70 (82.86%), Postives = 63/70 (90.00%), Query Frame = 1
Query: 64 RDPVETIVRKLADPDERKSAGTAPSKVEMYRGITVEELSAKWLEAILQLEKTEITVANAEHALEGALSIR 273
+DPVE IVRKLA PDER++A TAPSKVEMYRGITVEEL AKWLEA+L+LEK EI V NAEHALEGALSIR
Sbjct: 5 KDPVEEIVRKLAGPDEREAARTAPSKVEMYRGITVEELGAKWLEAVLELEKREIMVTNAEHALEGALSIR 74
BLAST of mRNA_Ecto-sp13_S_contig13414.2731.1 vs. uniprot
Match: A0A6H5L0H4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0H4_9PHAE) HSP 1 Score: 114 bits (284), Expect = 2.170e-27 Identity = 56/91 (61.54%), Postives = 68/91 (74.73%), Query Frame = 1
Query: 1 QMVLPRSWGIALTILEALERGRDPVETIVRKLADPDERKSAGTAPSKVEMYRGITVEELSAKWLEAILQLEKTEITVANAEHALEGALSIR 273
QMVLPRSW IALT+LEALE GRDPVE ++ K DPD + TA K ++Y+GITVEEL KW + +LE+ ITV NA++ALEGALSIR
Sbjct: 86 QMVLPRSWDIALTVLEALEHGRDPVEVVLHKSLDPDRGNATKTAEGKTDVYQGITVEELGTKWQGTVDELERRGITVTNAKNALEGALSIR 176
BLAST of mRNA_Ecto-sp13_S_contig13414.2731.1 vs. uniprot
Match: A0A6H5K1K4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1K4_9PHAE) HSP 1 Score: 114 bits (284), Expect = 2.230e-27 Identity = 56/91 (61.54%), Postives = 69/91 (75.82%), Query Frame = 1
Query: 1 QMVLPRSWGIALTILEALERGRDPVETIVRKLADPDERKSAGTAPSKVEMYRGITVEELSAKWLEAILQLEKTEITVANAEHALEGALSIR 273
Q VLPRSW IALT+LEALE GRDPVE ++ K DPD +A TA K ++Y+GITVEEL KW E + +LE+ ITV NA++ALEGALS+R
Sbjct: 259 QTVLPRSWDIALTVLEALEHGRDPVEAVLGKSPDPDGEDAAETAGGKTDVYQGITVEELGTKWQETVDELERRGITVTNAKNALEGALSVR 349
BLAST of mRNA_Ecto-sp13_S_contig13414.2731.1 vs. uniprot
Match: A0A6H5KSZ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSZ8_9PHAE) HSP 1 Score: 113 bits (282), Expect = 4.150e-27 Identity = 56/91 (61.54%), Postives = 69/91 (75.82%), Query Frame = 1
Query: 1 QMVLPRSWGIALTILEALERGRDPVETIVRKLADPDERKSAGTAPSKVEMYRGITVEELSAKWLEAILQLEKTEITVANAEHALEGALSIR 273
QMVLPRSW IALT+LEALE GRDPVE ++RK DPD + TA + MY+GITVE+LS KW E + LE++ +TV NA++ALEGAL IR
Sbjct: 424 QMVLPRSWDIALTVLEALEHGRDPVEVVLRKSPDPDRGDATETARGETAMYQGITVEDLSIKWQETVDGLERSGVTVTNAKNALEGALLIR 514
BLAST of mRNA_Ecto-sp13_S_contig13414.2731.1 vs. uniprot
Match: D7FUC9_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUC9_ECTSI) HSP 1 Score: 111 bits (278), Expect = 1.450e-26 Identity = 55/91 (60.44%), Postives = 68/91 (74.73%), Query Frame = 1
Query: 1 QMVLPRSWGIALTILEALERGRDPVETIVRKLADPDERKSAGTAPSKVEMYRGITVEELSAKWLEAILQLEKTEITVANAEHALEGALSIR 273
QMVLPRSW IALT+LEALERGRDPVE +V LA+PD + TA + +Y+GITVE L KW EA++ L + + V NA++ALEGALSIR
Sbjct: 468 QMVLPRSWDIALTVLEALERGRDPVEVVVEHLAEPDREDATRTAARQTGVYQGITVEALRVKWQEAVVGLARRGVNVTNAKNALEGALSIR 558
BLAST of mRNA_Ecto-sp13_S_contig13414.2731.1 vs. uniprot
Match: D7FUD0_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUD0_ECTSI) HSP 1 Score: 110 bits (274), Expect = 5.030e-26 Identity = 55/91 (60.44%), Postives = 66/91 (72.53%), Query Frame = 1
Query: 1 QMVLPRSWGIALTILEALERGRDPVETIVRKLADPDERKSAGTAPSKVEMYRGITVEELSAKWLEAILQLEKTEITVANAEHALEGALSIR 273
QMV+PRSW IALT+LEALERGRDPVE +V L D D + GTA K +Y GIT E+L KW EA + L +ITV NA++ALEGAL+IR
Sbjct: 568 QMVIPRSWDIALTVLEALERGRDPVEMVVEDLGDADGGDATGTAACKTGLYHGITAEDLRTKWQEAAVGLAGRDITVTNADNALEGALAIR 658
BLAST of mRNA_Ecto-sp13_S_contig13414.2731.1 vs. uniprot
Match: D8LF46_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF46_ECTSI) HSP 1 Score: 105 bits (261), Expect = 2.870e-24 Identity = 53/91 (58.24%), Postives = 65/91 (71.43%), Query Frame = 1
Query: 1 QMVLPRSWGIALTILEALERGRDPVETIVRKLADPDERKSAGTAPSKVEMYRGITVEELSAKWLEAILQLEKTEITVANAEHALEGALSIR 273
QMVLPRSW +AL +LEALE GRDPVE ++RK +PD T K ++Y+GITVEEL KW E + +LE+ ITV N +ALEGALSIR
Sbjct: 639 QMVLPRSWDVALAVLEALEHGRDPVEVVLRKSPEPDRGDETETG-GKADVYQGITVEELGTKWQETVDELERRGITVTNMMNALEGALSIR 728
BLAST of mRNA_Ecto-sp13_S_contig13414.2731.1 vs. uniprot
Match: A0A6H5JFQ1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFQ1_9PHAE) HSP 1 Score: 103 bits (257), Expect = 9.820e-24 Identity = 55/91 (60.44%), Postives = 68/91 (74.73%), Query Frame = 1
Query: 1 QMVLPRSWGIALTILEALERGRDPVETIVRKLADPDERKSAGTAPSKVEMYRGITVEELSAKWLEAILQLEKTEITVANAEHALEGALSIR 273
+++LPRSW IALT LEALERGRDPV+ V KL D E + A TA K+++Y+GITVEEL KW E +L+LEK + V N E+ALEGA SIR
Sbjct: 284 RIMLPRSWDIALTFLEALERGRDPVKMEVPKLVDSGE-EGAKTAEPKLDVYQGITVEELRGKWQETVLELEKIDEAVNNTENALEGARSIR 373
BLAST of mRNA_Ecto-sp13_S_contig13414.2731.1 vs. uniprot
Match: D8LJS7_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJS7_ECTSI) HSP 1 Score: 103 bits (256), Expect = 1.360e-23 Identity = 55/91 (60.44%), Postives = 65/91 (71.43%), Query Frame = 1
Query: 1 QMVLPRSWGIALTILEALERGRDPVETIVRKLADPDERKSAGTAPSKVEMYRGITVEELSAKWLEAILQLEKTEITVANAEHALEGALSIR 273
QMVLPRSW IALT L++LE GRDPVE ++ K D D T +K +Y+GITVEELSAKW E + L + ITV NAE+ALEGALSIR
Sbjct: 575 QMVLPRSWDIALTFLDSLEHGRDPVEMVILKSPDSDR---GATETAKTTVYQGITVEELSAKWQETVDGLGRRGITVTNAENALEGALSIR 662 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13414.2731.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig13414.2731.1 >prot_Ecto-sp13_S_contig13414.2731.1 ID=prot_Ecto-sp13_S_contig13414.2731.1|Name=mRNA_Ecto-sp13_S_contig13414.2731.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=94bp MVLPRSWGIALTILEALERGRDPVETIVRKLADPDERKSAGTAPSKVEMYback to top mRNA from alignment at Ecto-sp13_S_contig13414:459..3873+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig13414.2731.1 ID=mRNA_Ecto-sp13_S_contig13414.2731.1|Name=mRNA_Ecto-sp13_S_contig13414.2731.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3415bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13414:459..3873+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig13414:459..3873+ >mRNA_Ecto-sp13_S_contig13414.2731.1 ID=mRNA_Ecto-sp13_S_contig13414.2731.1|Name=mRNA_Ecto-sp13_S_contig13414.2731.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=282bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13414:459..3873+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |