mRNA_Ecto-sp13_S_contig1341.2728.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig1341.2728.1
Unique NamemRNA_Ecto-sp13_S_contig1341.2728.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1341.2728.1 vs. uniprot
Match: D7FJW4_ECTSI (Vesicle-fusing ATPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJW4_ECTSI)

HSP 1 Score: 421 bits (1082), Expect = 7.550e-144
Identity = 221/229 (96.51%), Postives = 223/229 (97.38%), Query Frame = 1 
Query:    1 GTGKTMLAKAVATESGYAFFNISASSLTSKYVGEGEKMVRALFAVAREREPAVIFIDEIDSVLSTRGEGEHEASRRLKTEFLVQLDGAGQGGDDRLLVLAATNLPQELDEAALRRLSRRVYVPLPDPPARKALISGLLGQQKGKIKGAALASLVDMTEGYSGSDLKQLCQEAAMQPIRADLGTRVRTVAAKDVRGINLDDFRAALPKVLPSVSRKIVERYEEWNRSLSG 687
            GTGKTMLAKAVATESGYAFFNISASSLTSKYVGEGEKMVRALFAVAREREPAV+FIDEIDSVLS RGEGEHEASRRLKTEFLVQLDGAGQGGDDRLLVLAATNLPQELDEAALRRLSRRVYVPLPDPPARKALISGLLGQQKG IKGAALASLV MTEGYSGSDLKQLC+EAAMQPIR DLGTRVRTVA KDVRGINLDDFRAALPKVLPSVSRK VERYEEWNRSLSG
Sbjct:  304 GTGKTMLAKAVATESGYAFFNISASSLTSKYVGEGEKMVRALFAVAREREPAVVFIDEIDSVLSARGEGEHEASRRLKTEFLVQLDGAGQGGDDRLLVLAATNLPQELDEAALRRLSRRVYVPLPDPPARKALISGLLGQQKGNIKGAALASLVGMTEGYSGSDLKQLCKEAAMQPIR-DLGTRVRTVAVKDVRGINLDDFRAALPKVLPSVSRKTVERYEEWNRSLSG 531
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BLAST of mRNA_Ecto-sp13_S_contig1341.2728.1 vs. uniprot
Match: A0A0S7IZ22_9TELE (FIGL1 (Fragment) n=1 Tax=Poeciliopsis prolifica TaxID=188132 RepID=A0A0S7IZ22_9TELE)

HSP 1 Score: 266 bits (679), Expect = 1.180e-86
Identity = 133/227 (58.59%), Postives = 177/227 (77.97%), Query Frame = 1 
Query:    1 GTGKTMLAKAVATESGYAFFNISASSLTSKYVGEGEKMVRALFAVAREREPAVIFIDEIDSVLSTRGEGEHEASRRLKTEFLVQLDGAGQGGDDRLLVLAATNLPQELDEAALRRLSRRVYVPLPDPPARKALISGLLGQQKGKIKGAALASLVDMTEGYSGSDLKQLCQEAAMQPIRADLGTRVRTVAAKDVRGINLDDFRAALPKVLPSVSRKIVERYEEWNRSL 681
            GTGKT++ K +A +SG  FF+ISASSLTSK+VGEGEKMVRALFA+AR  +PAVIFIDEIDS+LS R +GEH++SRR+KTEFLVQLDGA    DDR+LV+ ATN PQE+DEAA RRL++R+YVPLP+  AR+ +++ L+ Q++  ++G  L S+V  TEG+SG+D+ QLC+EAA+ PIR+     + T++A  VR I   DF+ AL  V PSVS K +E YE+WN++ 
Sbjct:   23 GTGKTLIGKCIACQSGATFFSISASSLTSKWVGEGEKMVRALFAIARCHQPAVIFIDEIDSLLSQRTDGEHDSSRRIKTEFLVQLDGAATAADDRILVVGATNRPQEIDEAARRRLAKRLYVPLPEAGARRQIVTNLMAQERNHLRGQELESVVAATEGFSGADMTQLCREAALGPIRSIQLNDIATISADQVRPILYADFQEALKTVRPSVSAKDLELYEDWNKTF 249
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BLAST of mRNA_Ecto-sp13_S_contig1341.2728.1 vs. uniprot
Match: K3W6T0_GLOUD (Vesicle-fusing ATPase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W6T0_GLOUD)

HSP 1 Score: 268 bits (686), Expect = 1.880e-85
Identity = 134/224 (59.82%), Postives = 175/224 (78.12%), Query Frame = 1 
Query:    1 GTGKTMLAKAVATESGYAFFNISASSLTSKYVGEGEKMVRALFAVAREREPAVIFIDEIDSVLSTRGEGEHEASRRLKTEFLVQLDGAGQGGDDRLLVLAATNLPQELDEAALRRLSRRVYVPLPDPPARKALISGLLGQQKGKIKGAALASLVDMTEGYSGSDLKQLCQEAAMQPIRADLGTRVRTVAAKDVRGINLDDFRAALPKVLPSVSRKIVERYEEWN 672
            GTGKT+LAKAVATES   FFNISAS+LTSK+VGEGEK+VR LFA+ARE +PAVIF+DE+D++LSTR   E++ASRR+K +F  +LDGA    +DR+LV+ ATNLPQELDEA +RRL +R+YVPLPD  +R+ LI  L+G QK  I    +A+LV  T+GYSGSDLK LC++AAM PIR +LG R+R V ++DVRG++  DF+ A+ +V PSVS++ +     WN
Sbjct:  188 GTGKTLLAKAVATESNATFFNISASTLTSKWVGEGEKLVRTLFAIARELQPAVIFLDEMDALLSTRSASENDASRRIKNQFFTELDGAASSPEDRILVMGATNLPQELDEAIIRRLEKRIYVPLPDETSRETLIRHLIGSQKYAISSHEMANLVKATDGYSGSDLKALCKDAAMGPIR-ELGARIRDVKSEDVRGVHASDFKVAISRVRPSVSKETINSLLAWN 410
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BLAST of mRNA_Ecto-sp13_S_contig1341.2728.1 vs. uniprot
Match: A0A835YKR4_9STRA (Vesicle-fusing ATPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKR4_9STRA)

HSP 1 Score: 266 bits (680), Expect = 1.160e-84
Identity = 143/226 (63.27%), Postives = 174/226 (76.99%), Query Frame = 1 
Query:    1 GTGKTMLAKAVATESGYAFFNISASSLTSKYVGEGEKMVRALFAVAREREPAVIFIDEIDSVLSTRGEGEHEASRRLKTEFLVQLDGA---GQGGDDRLLVLAATNLPQELDEAALRRLSRRVYVPLPDPPARKALISGLLGQQKGKIKGAALASLVDMTEGYSGSDLKQLCQEAAMQPIRADLGTRVRTVAAKDVRGINLDDFRAALPKVLPSVSRKIVERYEEW 669
            GTGKTMLAKAVATES + FF+ISASSLTSKYVGEGEK+VRALF  AR R P+V+F+DEIDS+LS RG GEHEASRRLKTEF+VQLDGA   G+G +  LLV+ ATNLP ELDEA LRRL+RRVYVPLPD  AR AL++ LL  Q  ++  A +A++V  +EGYS SDL  + +EAAMQP+R DLG+ +RT  A  VR I L DF  AL  + PSV+ + + R++ W
Sbjct:  182 GTGKTMLAKAVATESNFTFFSISASSLTSKYVGEGEKLVRALFRAARARRPSVVFVDEIDSLLSARGAGEHEASRRLKTEFMVQLDGACTGGEGDEGGLLVMGATNLPWELDEAVLRRLARRVYVPLPDGAARAALVARLLRGQSARLSKADVAAVVAASEGYSCSDLAAVTKEAAMQPLR-DLGSNIRTARANQVRPITLADFERALGVITPSVAPQSLARFQRW 406
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BLAST of mRNA_Ecto-sp13_S_contig1341.2728.1 vs. uniprot
Match: A0A6G1R1J8_9TELE (Fidgetin-like protein 1 n=1 Tax=Channa argus TaxID=215402 RepID=A0A6G1R1J8_9TELE)

HSP 1 Score: 263 bits (671), Expect = 4.410e-84
Identity = 133/227 (58.59%), Postives = 177/227 (77.97%), Query Frame = 1 
Query:    1 GTGKTMLAKAVATESGYAFFNISASSLTSKYVGEGEKMVRALFAVAREREPAVIFIDEIDSVLSTRGEGEHEASRRLKTEFLVQLDGAGQGGDDRLLVLAATNLPQELDEAALRRLSRRVYVPLPDPPARKALISGLLGQQKGKIKGAALASLVDMTEGYSGSDLKQLCQEAAMQPIRADLGTRVRTVAAKDVRGINLDDFRAALPKVLPSVSRKIVERYEEWNRSL 681
            GTGKT++ K +A +SG  FF+ISASSLTSK+VGEGEKMVRALFA+AR  +PAVIFIDEIDS+LS R +GEH++SRR+KTEFLVQLDGA    +DR+LV+ ATN PQE+DEAA RRL++R+Y+PLP+  AR+ +I+ L+ ++K +++   L S+V  TEG+SG+D+ QLC+EAA+ PIR+   + + TV A  VR I   DF+ AL  V PSVS K +E YEEWN++ 
Sbjct:  121 GTGKTLIGKCIACQSGATFFSISASSLTSKWVGEGEKMVRALFAIARCHQPAVIFIDEIDSLLSQRTDGEHDSSRRIKTEFLVQLDGAATAAEDRILVVGATNRPQEIDEAARRRLAKRLYIPLPERAARQQIITNLMAREKNQLREHELKSVVATTEGFSGADMTQLCREAALGPIRSIHLSDIATVTADQVRPILYSDFQEALKTVRPSVSSKDLELYEEWNKTF 347
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BLAST of mRNA_Ecto-sp13_S_contig1341.2728.1 vs. uniprot
Match: A0A6A3V580_9STRA (Vesicle-fusing ATPase n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3V580_9STRA)

HSP 1 Score: 264 bits (675), Expect = 7.170e-84
Identity = 135/224 (60.27%), Postives = 171/224 (76.34%), Query Frame = 1 
Query:    1 GTGKTMLAKAVATESGYAFFNISASSLTSKYVGEGEKMVRALFAVAREREPAVIFIDEIDSVLSTRGEGEHEASRRLKTEFLVQLDGAGQGGDDRLLVLAATNLPQELDEAALRRLSRRVYVPLPDPPARKALISGLLGQQKGKIKGAALASLVDMTEGYSGSDLKQLCQEAAMQPIRADLGTRVRTVAAKDVRGINLDDFRAALPKVLPSVSRKIVERYEEWN 672
            GTGKT+LAKAVATE+   FFNISASSLTSK+VGEGEK+VRALF +ARE +P+V+F+DEID++LSTR   E+EASRR+K +F  +LDGA    +DR+LV+ ATNLP ELDEA +RRL +R+YVPLPD P+R+ LI  LLG QK  +    +  +V  TEGYSGSDLK +C++AA+ PIR +LG +V  V A+DVRGIN  DF+ AL +V PSVS   +E    WN
Sbjct:  184 GTGKTLLAKAVATEAKATFFNISASSLTSKWVGEGEKLVRALFEMARELQPSVVFMDEIDALLSTRSASENEASRRIKNQFFTELDGAASSQEDRILVMGATNLPHELDEAIVRRLEKRIYVPLPDAPSRERLIRHLLGSQKFSLSSKDIKHVVKATEGYSGSDLKAVCKDAALGPIR-ELGAKVANVKAEDVRGINASDFQVALTRVRPSVSTTTIEALVTWN 406
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BLAST of mRNA_Ecto-sp13_S_contig1341.2728.1 vs. uniprot
Match: A0A2P4YIG4_9STRA (Vesicle-fusing ATPase n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YIG4_9STRA)

HSP 1 Score: 264 bits (674), Expect = 1.560e-83
Identity = 134/225 (59.56%), Postives = 173/225 (76.89%), Query Frame = 1 
Query:    1 GTGKTMLAKAVATESGYAFFNISASSLTSKYVGEGEKMVRALFAVAREREPAVIFIDEIDSVLSTRGEGEHEASRRLKTEFLVQLDGAGQGGDDRLLVLAATNLPQELDEAALRRLSRRVYVPLPDPPARKALISGLLGQQKGKIKGAALASLVDMTEGYSGSDLKQLCQEAAMQPIRADLGTRVRTVAAKDVRGINLDDFRAALPKVLPSVSRKIVERYEEWNR 675
            GTGKT+LAKAVATE+   FFNISASSLTSK+VGEGEK+VRALF +ARE +P+V+F+DEID++LSTR   E++ASRR+K +F  +LDGA    +DR+LV+ ATNLPQELDEA +RRL +R+YVPLPDP +R+ LI  LLG QK  +    +  +V  T+GYSGSDLK +C++AA+ PIR +LG +V  V A+DVRGIN  DF+ AL +V PSVS   +E    WN+
Sbjct:  199 GTGKTLLAKAVATEANATFFNISASSLTSKWVGEGEKLVRALFEMARELQPSVVFMDEIDALLSTRSASENDASRRIKNQFFTELDGAASSQEDRILVMGATNLPQELDEAIVRRLEKRIYVPLPDPRSREGLILHLLGTQKFSLSSKDIKHVVKATDGYSGSDLKAVCKDAALGPIR-ELGEKVANVKAEDVRGINASDFQVALTRVRPSVSSTTIEALVAWNQ 422
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BLAST of mRNA_Ecto-sp13_S_contig1341.2728.1 vs. uniprot
Match: W2MPP9_PHYPR (AAA domain-containing protein n=8 Tax=Phytophthora parasitica TaxID=4792 RepID=W2MPP9_PHYPR)

HSP 1 Score: 260 bits (665), Expect = 4.540e-83
Identity = 133/224 (59.38%), Postives = 170/224 (75.89%), Query Frame = 1 
Query:    1 GTGKTMLAKAVATESGYAFFNISASSLTSKYVGEGEKMVRALFAVAREREPAVIFIDEIDSVLSTRGEGEHEASRRLKTEFLVQLDGAGQGGDDRLLVLAATNLPQELDEAALRRLSRRVYVPLPDPPARKALISGLLGQQKGKIKGAALASLVDMTEGYSGSDLKQLCQEAAMQPIRADLGTRVRTVAAKDVRGINLDDFRAALPKVLPSVSRKIVERYEEWN 672
            GTGKT+LAKAVATE+   FFNISASSLTSK+VGEGEK+VRALF +ARE +P+V+F+DEID++LSTR   E++ASRR+K +F  +LDGA    +DR+LV+ ATNLPQELDEA +RRL +R+YVPLPD  +R+ LI  LL  QK  +       +V  TEGYSGSDLK +C++AA+ PIR +LG RV  V A+DVRGIN  DF+ AL +V PSVS + ++    WN
Sbjct:  129 GTGKTLLAKAVATEAKATFFNISASSLTSKWVGEGEKLVRALFEMARELQPSVVFMDEIDALLSTRSASENDASRRIKNQFFTELDGAASSQEDRILVMGATNLPQELDEAIVRRLEKRIYVPLPDASSREGLIRHLLSSQKFSMSSRDFKQIVKATEGYSGSDLKAVCKDAALGPIR-ELGARVANVKAEDVRGINASDFQVALTRVRPSVSSRTIQDLVAWN 351
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BLAST of mRNA_Ecto-sp13_S_contig1341.2728.1 vs. uniprot
Match: D0MZT8_PHYIT (Vesicle-fusing ATPase n=21 Tax=Phytophthora TaxID=4783 RepID=D0MZT8_PHYIT)

HSP 1 Score: 261 bits (668), Expect = 7.250e-83
Identity = 133/224 (59.38%), Postives = 172/224 (76.79%), Query Frame = 1 
Query:    1 GTGKTMLAKAVATESGYAFFNISASSLTSKYVGEGEKMVRALFAVAREREPAVIFIDEIDSVLSTRGEGEHEASRRLKTEFLVQLDGAGQGGDDRLLVLAATNLPQELDEAALRRLSRRVYVPLPDPPARKALISGLLGQQKGKIKGAALASLVDMTEGYSGSDLKQLCQEAAMQPIRADLGTRVRTVAAKDVRGINLDDFRAALPKVLPSVSRKIVERYEEWN 672
            GTGKT+LAKAVATE+   FFNISASSLTSK+VGEGEK+VRALF +ARE +P+V+F+DEID++LSTR   E++ASRR+K +F ++LDGA    +DR+LV+ ATNLPQELDEA +RRL +R+YVPLPDP +R+ LI  LL  QK  +       +V +TEGYSGSDLK +C++AA+ PIR +LG +V  V A+DVRGIN  DF+ AL +V PSVS   ++    WN
Sbjct:  180 GTGKTLLAKAVATEAKATFFNISASSLTSKWVGEGEKLVRALFEMARELQPSVVFMDEIDALLSTRSASENDASRRIKNQFFIELDGAASSQEDRVLVMGATNLPQELDEAIVRRLEKRIYVPLPDPSSREGLIRHLLRSQKFSLSSRDFKLIVKVTEGYSGSDLKAVCKDAALGPIR-ELGAKVANVKAEDVRGINASDFQVALTRVRPSVSSTTIQDLVAWN 402
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BLAST of mRNA_Ecto-sp13_S_contig1341.2728.1 vs. uniprot
Match: UPI001C35628D ((large yellow croaker) hypothetical protein n=1 Tax=Larimichthys crocea TaxID=215358 RepID=UPI001C35628D)

HSP 1 Score: 257 bits (656), Expect = 1.140e-82
Identity = 133/227 (58.59%), Postives = 167/227 (73.57%), Query Frame = 1 
Query:    1 GTGKTMLAKAVATESGYAFFNISASSLTSKYVGEGEKMVRALFAVAREREPAVIFIDEIDSVLSTRGEGEHEASRRLKTEFLVQLDGAGQGGDDRLLVLAATNLPQELDEAALRRLSRRVYVPLPDPPARKALISGLLGQQKGKIKGAALASLVDMTEGYSGSDLKQLCQEAAMQPIRADLGTRVRTVAAKDVRGINLDDFRAALPKVLPSVSRKIVERYEEWNRSL 681
            G GKTMLAKAVA ES   FFNISA+SLTSKYVGEGEK+VRALFAVARE +P+VIFIDE+DS+L  R EGEH+ASRRLKTEFL++ DG   GGDDR+LV+ ATN PQELDEA LRR ++R+YV LPD   R  L+  LL +Q   +    L++L   TEGYSGSDL  L ++AA+ PIR     +VR+VAA ++R I + DF  +L ++ PSVS   ++ Y +WN+  
Sbjct:   56 GNGKTMLAKAVAAESKATFFNISAASLTSKYVGEGEKLVRALFAVARELQPSVIFIDEVDSLLCERREGEHDASRRLKTEFLIEFDGVQSGGDDRVLVMGATNRPQELDEAVLRRFAKRIYVALPDAETRFTLLKNLLEKQGCPLSKNELSTLAKKTEGYSGSDLTSLAKDAALGPIRELGPDQVRSVAASEMRNIKMKDFEESLKRIKPSVSPATLDMYSKWNKDF 282
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1341.2728.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJW4_ECTSI7.550e-14496.51Vesicle-fusing ATPase n=2 Tax=Ectocarpus TaxID=287... [more]
A0A0S7IZ22_9TELE1.180e-8658.59FIGL1 (Fragment) n=1 Tax=Poeciliopsis prolifica Ta... [more]
K3W6T0_GLOUD1.880e-8559.82Vesicle-fusing ATPase n=1 Tax=Globisporangium ulti... [more]
A0A835YKR4_9STRA1.160e-8463.27Vesicle-fusing ATPase n=1 Tax=Tribonema minus TaxI... [more]
A0A6G1R1J8_9TELE4.410e-8458.59Fidgetin-like protein 1 n=1 Tax=Channa argus TaxID... [more]
A0A6A3V580_9STRA7.170e-8460.27Vesicle-fusing ATPase n=4 Tax=Phytophthora TaxID=4... [more]
A0A2P4YIG4_9STRA1.560e-8359.56Vesicle-fusing ATPase n=1 Tax=Phytophthora palmivo... [more]
W2MPP9_PHYPR4.540e-8359.38AAA domain-containing protein n=8 Tax=Phytophthora... [more]
D0MZT8_PHYIT7.250e-8359.38Vesicle-fusing ATPase n=21 Tax=Phytophthora TaxID=... [more]
UPI001C35628D1.140e-8258.59(large yellow croaker) hypothetical protein n=1 Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1341contigEcto-sp13_S_contig1341:12938..17495 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score411.8
Seed ortholog evalue2.1e-112
Seed eggNOG ortholog2880.D7FJW4
Preferred nameYTA6
Model size690
KEGG rclassRC00002
KEGG koko:K01509,ko:K13254,ko:K20293
KEGG ReactionR00086
KEGG Pathwayko00230,ko04742,map00230,map04742
Hectar predicted targeting categoryother localisation
GOsGO:0000018,GO:0000166,GO:0000226,GO:0000287,GO:0001578,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005856,GO:0005938,GO:0005940,GO:0006139,GO:0006163,GO:0006282,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006996,GO:0007010,GO:0007017,GO:0007346,GO:0008017,GO:0008092,GO:0008144,GO:0008150,GO:0008152,GO:0008568,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0010569,GO:0015631,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0017144,GO:0019219,GO:0019222,GO:0019637,GO:0019693,GO:0030427,GO:0030554,GO:0031097,GO:0031323,GO:0032153,GO:0032155,GO:0032156,GO:0032161,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0035639,GO:0035838,GO:0035840,GO:0035841,GO:0036094,GO:0036391,GO:0042623,GO:0043167,GO:0043168,GO:0043169,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0044237,GO:0044238,GO:0044281,GO:0044422,GO:0044424,GO:0044430,GO:0044444,GO:0044446,GO:0044448,GO:0044464,GO:0045787,GO:0045931,GO:0046034,GO:0046483,GO:0046872,GO:0048518,GO:0048522,GO:0048583,GO:0050789,GO:0050794,GO:0051013,GO:0051052,GO:0051171,GO:0051286,GO:0051726,GO:0055086,GO:0060255,GO:0065007,GO:0071704,GO:0071840,GO:0071944,GO:0072521,GO:0080090,GO:0080134,GO:0080135,GO:0097159,GO:0097367,GO:0099568,GO:0099738,GO:0140096,GO:1901135,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:2000779,GO:2001020
Exons6
EggNOG free text desc.Belongs to the AAA ATPase family
EggNOG OGsCOG0464@1,KOG0740@2759
EC3.6.1.3,3.6.4.3
Cds size675
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko04131
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1341.2728.1prot_Ecto-sp13_S_contig1341.2728.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig1341 12938..17480 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462716.8871365-CDS-Ecto-sp13_S_contig1341:12937..129711681462716.8871365-CDS-Ecto-sp13_S_contig1341:12937..12971Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1341 12938..12971 -
1681462716.9000833-CDS-Ecto-sp13_S_contig1341:13304..134251681462716.9000833-CDS-Ecto-sp13_S_contig1341:13304..13425Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1341 13305..13425 -
1681462716.9091244-CDS-Ecto-sp13_S_contig1341:14328..144231681462716.9091244-CDS-Ecto-sp13_S_contig1341:14328..14423Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1341 14329..14423 -
1681462716.9190478-CDS-Ecto-sp13_S_contig1341:14817..149391681462716.9190478-CDS-Ecto-sp13_S_contig1341:14817..14939Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1341 14818..14939 -
1681462716.9288113-CDS-Ecto-sp13_S_contig1341:15726..158701681462716.9288113-CDS-Ecto-sp13_S_contig1341:15726..15870Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1341 15727..15870 -
1681462716.9390738-CDS-Ecto-sp13_S_contig1341:17321..174801681462716.9390738-CDS-Ecto-sp13_S_contig1341:17321..17480Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1341 17322..17480 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462716.9496958-UTR-Ecto-sp13_S_contig1341:17480..174951681462716.9496958-UTR-Ecto-sp13_S_contig1341:17480..17495Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1341 17481..17495 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig1341.2728.1

>prot_Ecto-sp13_S_contig1341.2728.1 ID=prot_Ecto-sp13_S_contig1341.2728.1|Name=mRNA_Ecto-sp13_S_contig1341.2728.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=225bp
MLAKAVATESGYAFFNISASSLTSKYVGEGEKMVRALFAVAREREPAVIF
IDEIDSVLSTRGEGEHEASRRLKTEFLVQLDGAGQGGDDRLLVLAATNLP
QELDEAALRRLSRRVYVPLPDPPARKALISGLLGQQKGKIKGAALASLVD
MTEGYSGSDLKQLCQEAAMQPIRADLGTRVRTVAAKDVRGINLDDFRAAL
PKVLPSVSRKIVERYEEWNRSLSG*
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mRNA from alignment at Ecto-sp13_S_contig1341:12938..17495-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig1341.2728.1 ID=mRNA_Ecto-sp13_S_contig1341.2728.1|Name=mRNA_Ecto-sp13_S_contig1341.2728.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4558bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1341:12938..17495- (Ectocarpus species13 EcNAP12_S_4_19m)
GGCACGGGTAAGACGATGCTGGCGAAGGCGGTGGCGACCGAGAGCGGCTA
CGCCTTCTTCAACATTTCGGCCTCGTCGCTGACCTCCAAGTACGTGGGCG
AGGGGGAGAAGATGGTCCGGGCTCTCTTCGCCGTGGCCAGGGAGAGGGAG
CCGGCCGTTATTTTCATCGACGAGGTATGAACAACTGTTCTGATATTTTC
TCCAATGGGTAGAGTTTCTTTGATATGTGTAATGCATATTTTCAAAAACC
GGGGTGAGGTGATTCGCCTATTAGGTGATTGCTGGCGACCGCAGGCCGCT
GTTTTCATGGAGGAGGCGTGCAAAAATGACGTTTGCTGGGCTTGGTTTGG
GGTGATGTGTAGAGATGATTGCTGGCGACGGCCGGCGGTTTTTTGCATCG
ACGAGGTATGAACCAACAGACTTGGAAGGCTTGGATTGGTGTGATCGCGA
CGCGCGATTTTCGAGAAAAGGGAAAGGTGGCACGCAGTTTTCTACTTCTG
CCATTGTTTTCCGGAGGTTGGTGTCATCGAACCGGTGCAGACCTCATGTG
GTTTGATTTCCTTTAGCTCGAGCCTTGATCAAGTGGCGGCGAGATTAGTT
TCATTTTATCGAAACGGTGGGGATTTGATTCATTTTTTTTTTTTTTTTTT
TGGGATTTGATTCATTTTTTTTTTTTTTTCTTGTTCCGTTTCCTATTTTA
CCTTCGCCCGGAGTGTTGGTCGCGCGGAATCAAGGGCGGGATCGCACGAG
ACAGGGCATTTTTTTCTCTTCGTGAAAGATACCAACCCGCTTTCACTAGT
AGACAGACTACCTACTTTTGGACACGTGGTTCTGGGTGATGAGCAGCAAA
CCGGAACGCGGTGTGCAGAACGAGGTACGCTCGAGGACCTGGGACTTGAC
ACCCCTCCAAGCACGCAGTCCCTCCGCAAAAGGGCAAATCGCACACATTT
TTGTCAGTCGTTAGCCGAGGGGCTACGGTCCCTCCAAGAAATCGGAGATC
GCCGATCTCCTTGCCAGACAAAGGGAGACTTGGCTTCAGCATGAAAGATG
TCCCCAAAACACGTGGGGACACTTCTCATACTGAAACCAAGTCAGCTATG
TTTTCAGAACCAGGCGATGTACACTTTCACCCAAAGTGTCGAGGGTTAGG
CATCTAGCCTCAGAAGTACGACAAATCCAAGAACCTTAGACACCGTAAGG
ACACGGGTGCTCAGTTGAAATCTTGCCTAGCCGCTGCTAGGCAGTAACTT
TCGCAGGGTTTTTCGATTGAGTAAACATGCTGGATAAGTCATGCAATCGG
GGAAGTTGGTTCAGTGAAGAGAGTCTGCGTCCCCCCTCCCTGTTCTATTC
CCTCACAAACTTATTTGCCTCAGGAAGGCGGTCCTTGCTATGTAGGAGCT
ATCCCACAGAGGGCATAAGAATCGAACCTCGGGCAAAACAAAGGGTTCTT
GGGTTGCGGTGCATTCTGTATGAGGATCGAGAAGTTCCCGCTCGACATGC
GAACGCGTGATGATCATCAACACCAGCACACGTACCCCGCCATCGAACCG
TCCCTCAAAAAGCCTCGCCGCTGCTTCCAACGGTCCCCCGTCCCTTCCAA
ACCGCCTCCGCCGCTGCCTTCCCAGATCGATTCTGTGTTGTCGACTCGAG
GCGAGGGAGAGCACGAGGCCAGCCGGCGATTGAAGACGGAGTTCCTGGTG
CAGTTGGACGGCGCCGGACAGGGGGGGGATGACCGGCTCTTGGTGCTCGC
AGCCACGAACCTCCCTCAGGTATGGTGCGGTGTTATAATGGTTGCGATGT
GATAGTGGTGCGGTGTGATAATGGTGCGGTGTGAGGGGTTCCGGTACGGA
TGCCCGGTACGGTTGTGGCACAGTTGGTGGTGCCTACGTAGTTAAATAGC
TGTGTTTCTGAAGGCATCATCCACGTGTGTGTTTGTTTTGCAACCATCGG
TGTTCTTGTCTCTCTTTAGTTACCATCGGTGTGTGTATGTTTGTTTTTTT
GCTCACACCGGCCGCGCTAGACGGCCGGCCTAGGGAACGACGTAAATCTT
AACCGGGACAACAAGTGTGCCTTCTGTGTGTGTGTGTGTGTGCGTCTCTT
TAGGATTAGCATCGACCGCGCCAATAAGGCAACCAACGAACATACTTCAG
TCTTGAAGCGGGATTAAAAACGCGAAGACGCTTTTTACAGTCATCGGGCT
CCCCATGCAGGGGAGCTGCGGAGGGGATTGAACGACGGGGTCCAGCCTCC
GGATTCGAAGCACCATAGGAGGAGACTCACCGCCACCTCTTGCCGCAACC
TGCTGCGTTTTCTGCGCTCTGCTAGCATCGTTATCTTGCAGTAGGTTGCT
TTCTATCCGCTTGTCCACTGCTATTGCTTCATCACCTTTGTCCCTGCGAT
TCTTGCTGGTTTTGTCTCTGTTACCCTTGCTCTGGAGAAATCTATTTTTC
CTTTCATTGGTGCAAGTTTGTAGTCGACGGACGGATGAAGATCTACTGTG
TGCCCCCCCCTGCCCTTGCACTCTCGTGTGTGGAACCTCCCGCGCCCCCC
CGCCAGGAATTAGACGAGGCAGCCCTCCGGAGGCTGTCGCGGCGTGTTTA
TGTTCCCTTGCCAGACCCTCCGGCTAGAAAAGCTCTCATATCTGGCCTCC
TAGGCCAGCAAAAGGGAAAAATCAAGGGGTGCGTGGGGTTGTTATTATTG
CTGTTCATGAAGATGATGGTGGTGTTTCCCCTGCCTTTGCTGCTCTTTGT
CAGGGTTGTAGCTTCTCGTCATTTTGTGTAATGGTGGAATAGGTTGGGTT
CTCGTTCTGCTGGTGATGATGATGAAGATGTTTCCTGATACATGCTTTTT
ACCGTTGTTGCTGCTGCTTGATGGTGATGATGTATGCTGGTACTCTTGCT
GTTGCTGCTGCTATTTGATGATTATGATGGTGATGATGATACTGACTGAC
ACTCTTCCTGTTATTGTTTTGTCTCGCTGTTATCCTTAAAATCGGTGTCG
ATGCTGGCATTGCTGTTGCTGTTGTTGTTCACGTCCTCCGCGTCGCTTGA
ACTGCTCTATCTTCTGTCGCAGGGCTGCCCTCGCGTCACTGGTGGACATG
ACCGAGGGTTACTCCGGGAGCGATCTCAAGCAGCTGTGCCAAGAGGCCGC
CATGCAGCCAATAAGAGGTGAGTGTCGTTTGCCGACGTGTGAACATCTCT
TCCGTATCCAGAAGAGGCTGGTACGATTTGAGAGAGGCTGATTCCAAAAG
GAATCCAGGTTTAACGGAGTTTAGAGTGGCCTCACACGGATGCTGTCCCA
GTATGAGAACTTTTCCGACAATCCATTCCCGTGAACCTATCGTAAGTCGA
AACTCTTCGATCGAGCGCACACACCCGATGCGCATCGACAGAAGAAGAAC
GTAGCAGCAGACGCCACCCCATGTGCCACGCCCCCCTCACAAATAAAAAA
CCACCGTGCAGAATCTGCACAGGTTGCCTTTGAGGAAAACGTGGCTTGGT
TGATCGTCAGGGCTGTTGTGGTTATTGTTGTCTTCATATAAAAAACCGTT
CCGGTCTCCGCTTGGTACCTTGTCATGTCCGTACTGGTCCAACTGACGCG
GACGCAGGGTGACAGCGAAAATTGCAAAGTATTTACCAACGACAGAGAGG
TGCAACACTTTATTTTCTGGGGGTCCTTTGCACGAAGATGCCGTGTCGAC
GGCGTTTTGCTCGCACGCGCAAGGTCGTTAGAGTTCATTAACGATCACTT
CAAGGTTGTTCACTAGACTAGTATTCTACAGAATCCGATCAATGTTCCTC
TCTTTTAGACCCCAAAAAAATGTAGGTGTCCATTGGAGATCGGTCAAAGA
ATGCCGTGGCGCTACGTACTCCCCGGTTCTGTTACACTTTTTTTTTTTTT
CGTTAGGCGAACATGAGCTAGCTCTTCGCTCGCGAGGAACGTGTTTCCAA
GAAAAAAAAATGTAGAAACGCAAGAGCATGCAAAGCAAAGGGCCTCCAAA
ATAGCCCGTTTGTTCGTTGGTTGATCTGCCCGCGCACGTTGTTGTTGGGG
GTGATTTGGCGCCCGGTGAGCAGATTTAGGAACGAGGGTGCGCACGGTTG
CCGCGAAGGACGTGCGCGGGATCAACTTGGACGACTTTCGAGCCGCGCTT
CCGAAAGTTCTTCCGTCGGTGTCACGGAAAATCGTGGAACGGTGAGAGCG
CTAGCTGCCAAGCGGAAGACCGGGTGTTGGAGACACGTTGGCAAATATTC
GGGTTGTTGTACATATTCCAGCTGGTGTTTGTATTTCCGCACGGCTTTTT
GTTGTTTCGTAGGCACACAAGTCTTTGTTTCTTGTTAAGGTTTTGTAGTC
TCTAGCACGAGGCAACACGCGCTCCACCTTGACCCCTCCCCCTGCACCCA
ATATCTCAATCAATCGCGGTTCCTCTTTTACCTTATTCCCTTGCACTTGT
CTCCCCCCTTGAAGCGCTCCCATCTAAATCTGATCGACCGTTTGTTTAAT
TCTTGTTCCTTCTCCTCCCTCAAGATATGAGGAGTGGAATCGCTCGCTCT
CTGGATGA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1341:12938..17495-

>mRNA_Ecto-sp13_S_contig1341.2728.1 ID=mRNA_Ecto-sp13_S_contig1341.2728.1|Name=mRNA_Ecto-sp13_S_contig1341.2728.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=675bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1341:12938..17495- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCTGGCGAAGGCGGTGGCGACCGAGAGCGGCTACGCCTTCTTCAACAT
TTCGGCCTCGTCGCTGACCTCCAAGTACGTGGGCGAGGGGGAGAAGATGG
TCCGGGCTCTCTTCGCCGTGGCCAGGGAGAGGGAGCCGGCCGTTATTTTC
ATCGACGAGATCGATTCTGTGTTGTCGACTCGAGGCGAGGGAGAGCACGA
GGCCAGCCGGCGATTGAAGACGGAGTTCCTGGTGCAGTTGGACGGCGCCG
GACAGGGGGGGGATGACCGGCTCTTGGTGCTCGCAGCCACGAACCTCCCT
CAGGAATTAGACGAGGCAGCCCTCCGGAGGCTGTCGCGGCGTGTTTATGT
TCCCTTGCCAGACCCTCCGGCTAGAAAAGCTCTCATATCTGGCCTCCTAG
GCCAGCAAAAGGGAAAAATCAAGGGGGCTGCCCTCGCGTCACTGGTGGAC
ATGACCGAGGGTTACTCCGGGAGCGATCTCAAGCAGCTGTGCCAAGAGGC
CGCCATGCAGCCAATAAGAGCAGATTTAGGAACGAGGGTGCGCACGGTTG
CCGCGAAGGACGTGCGCGGGATCAACTTGGACGACTTTCGAGCCGCGCTT
CCGAAAGTTCTTCCGTCGGTGTCACGGAAAATCGTGGAACGATATGAGGA
GTGGAATCGCTCGCTCTCTGGATGA
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